EWM22971.1, cds7719 (CDS) Nannochloropsis gaditana

Overview
NameEWM22971.1
Unique Namecds7719
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002473.1:208647..209996 -

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Properties
Property NameValue
Protein idEWM22971.1
ProductZinc finger, PARP-type
Orig transcript idgnl|cribi|Naga_100102g20.82.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002473.1supercontigCM002473.1:208647..209996 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0008270zinc ion binding
Vocabulary: INTERPRO
TermDefinition
IPR001510Znf_PARP
Homology
[Close]
BLAST of EWM22971.1 vs. NCBI_GenBank
Match: gi|585103704|gb|EWM22971.1| (Zinc finger, PARP-type [Nannochloropsis gaditana])

HSP 1 Score: 927.932 bits (2397), Expect = 0.000e+0
Identity = 449/449 (100.00%), Postives = 449/449 (100.00%), Query Frame = 0 
Query:    1 MFRVFVSRLRRSFTSGNVFKFGRHSFHRNIQPYFHYNKQVVSGIVSMSLDAGGCGRKARTPSPHEHHFKDLRIDTTCLFPDQFDAFLSTSDQYQSAEVSTPTTPNATGAGRVNFDETGATTNPSFASTSSGQQYKTACHVVGYAPEGTASRCRVCGSGFEPHGLRFGTFFSHAQGFIFLRWHHLPCLRPPSSLEDITTLSGHCNLSQDDVKVVQGWIDGNGVAPASLPLSPFSAFRSSPSFADSDRENKIPEWQTLGSINDDLCSSDTSINSNMNGNEWESRPRGIRPGQASPLSPPLVWPLQDRIVELADTSTLSTPSHSSGCLGVIANQSTSSFIPISSPVESLLIRKNSERERGAQELSHAGLFSTSPPRSDYMIDRNLPSPREMSRSRGTKFRAETPIFSLTGKNNLKVGESVELTAQEEMAKAESEMLRQTAKIERHRRQSRTI 449
            MFRVFVSRLRRSFTSGNVFKFGRHSFHRNIQPYFHYNKQVVSGIVSMSLDAGGCGRKARTPSPHEHHFKDLRIDTTCLFPDQFDAFLSTSDQYQSAEVSTPTTPNATGAGRVNFDETGATTNPSFASTSSGQQYKTACHVVGYAPEGTASRCRVCGSGFEPHGLRFGTFFSHAQGFIFLRWHHLPCLRPPSSLEDITTLSGHCNLSQDDVKVVQGWIDGNGVAPASLPLSPFSAFRSSPSFADSDRENKIPEWQTLGSINDDLCSSDTSINSNMNGNEWESRPRGIRPGQASPLSPPLVWPLQDRIVELADTSTLSTPSHSSGCLGVIANQSTSSFIPISSPVESLLIRKNSERERGAQELSHAGLFSTSPPRSDYMIDRNLPSPREMSRSRGTKFRAETPIFSLTGKNNLKVGESVELTAQEEMAKAESEMLRQTAKIERHRRQSRTI
Sbjct:    1 MFRVFVSRLRRSFTSGNVFKFGRHSFHRNIQPYFHYNKQVVSGIVSMSLDAGGCGRKARTPSPHEHHFKDLRIDTTCLFPDQFDAFLSTSDQYQSAEVSTPTTPNATGAGRVNFDETGATTNPSFASTSSGQQYKTACHVVGYAPEGTASRCRVCGSGFEPHGLRFGTFFSHAQGFIFLRWHHLPCLRPPSSLEDITTLSGHCNLSQDDVKVVQGWIDGNGVAPASLPLSPFSAFRSSPSFADSDRENKIPEWQTLGSINDDLCSSDTSINSNMNGNEWESRPRGIRPGQASPLSPPLVWPLQDRIVELADTSTLSTPSHSSGCLGVIANQSTSSFIPISSPVESLLIRKNSERERGAQELSHAGLFSTSPPRSDYMIDRNLPSPREMSRSRGTKFRAETPIFSLTGKNNLKVGESVELTAQEEMAKAESEMLRQTAKIERHRRQSRTI 449
The following BLAST results are available for this feature:
BLAST of EWM22971.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585103704|gb|EWM22971.1|0.000e+0100.00Zinc finger, PARP-type [Nannochloropsis gaditana][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7740rna7740Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications