EWM22994.1, cds7679 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22994.1 vs. NCBI_GenBank
Match: gi|585103750|gb|EWM22994.1| (hypothetical protein Naga_100761g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 1068.53 bits (2762), Expect = 0.000e+0 Identity = 525/525 (100.00%), Postives = 525/525 (100.00%), Query Frame = 0
Query: 1 MKSEGNIPSEPTPSSSALTNPPMPRHTPYRPSLDRLPQIRESTESDKEADVGPDSAPYKDELTDTVTWPPPPSGSGDSAPFHPHPSLSSPTEVRETNGKSGNDEAHGNAQADGNNPRRPPSSSQSPARISIHVPPTSTGGKLPTSVNNDRSHVESTQEGSPCRHDAGHRRPVGKRRSSRSKRPAWHPLSFFQRRSARRRATAPVKAAQGPSPLLGAALMHFHRKLRLGFRTALAIALATTTSQFFWNWAHILTWFSVTLVVSGTHESLGRTLRTAFDFWKGFTVVLPLVYLIRPNRDSTPLTITGLFFSVAFLIWLPGISDPGKRMATIFLTIVVIYCVLDPALLYNHMVRDVCFTLLFANAFSIIALLLPFPSPSLALLDVRVKLGMVRHRLGSILRGCNEAFSLGEEVHYSMLEQLLQETSATVADIKEQIPFVKWEAVLLRLPVSMPGQLESFLTTIEAQLELFRGMRLSLRRMSNNATHQEFLKYLQEPLSQVVKASVAVSDAAARHIEAELVLFPSRPPP 525
MKSEGNIPSEPTPSSSALTNPPMPRHTPYRPSLDRLPQIRESTESDKEADVGPDSAPYKDELTDTVTWPPPPSGSGDSAPFHPHPSLSSPTEVRETNGKSGNDEAHGNAQADGNNPRRPPSSSQSPARISIHVPPTSTGGKLPTSVNNDRSHVESTQEGSPCRHDAGHRRPVGKRRSSRSKRPAWHPLSFFQRRSARRRATAPVKAAQGPSPLLGAALMHFHRKLRLGFRTALAIALATTTSQFFWNWAHILTWFSVTLVVSGTHESLGRTLRTAFDFWKGFTVVLPLVYLIRPNRDSTPLTITGLFFSVAFLIWLPGISDPGKRMATIFLTIVVIYCVLDPALLYNHMVRDVCFTLLFANAFSIIALLLPFPSPSLALLDVRVKLGMVRHRLGSILRGCNEAFSLGEEVHYSMLEQLLQETSATVADIKEQIPFVKWEAVLLRLPVSMPGQLESFLTTIEAQLELFRGMRLSLRRMSNNATHQEFLKYLQEPLSQVVKASVAVSDAAARHIEAELVLFPSRPPP
Sbjct: 1 MKSEGNIPSEPTPSSSALTNPPMPRHTPYRPSLDRLPQIRESTESDKEADVGPDSAPYKDELTDTVTWPPPPSGSGDSAPFHPHPSLSSPTEVRETNGKSGNDEAHGNAQADGNNPRRPPSSSQSPARISIHVPPTSTGGKLPTSVNNDRSHVESTQEGSPCRHDAGHRRPVGKRRSSRSKRPAWHPLSFFQRRSARRRATAPVKAAQGPSPLLGAALMHFHRKLRLGFRTALAIALATTTSQFFWNWAHILTWFSVTLVVSGTHESLGRTLRTAFDFWKGFTVVLPLVYLIRPNRDSTPLTITGLFFSVAFLIWLPGISDPGKRMATIFLTIVVIYCVLDPALLYNHMVRDVCFTLLFANAFSIIALLLPFPSPSLALLDVRVKLGMVRHRLGSILRGCNEAFSLGEEVHYSMLEQLLQETSATVADIKEQIPFVKWEAVLLRLPVSMPGQLESFLTTIEAQLELFRGMRLSLRRMSNNATHQEFLKYLQEPLSQVVKASVAVSDAAARHIEAELVLFPSRPPP 525
BLAST of EWM22994.1 vs. NCBI_GenBank
Match: gi|585113186|gb|EWM30522.1| (hypothetical protein Naga_100013g27 [Nannochloropsis gaditana]) HSP 1 Score: 140.969 bits (354), Expect = 1.132e-31 Identity = 94/302 (31.13%), Postives = 150/302 (49.67%), Query Frame = 0
Query: 221 FHRKLRLGFRTALAIALATTTSQFFWNWAHILTWFSVTLVVSGTHESLGRTLRTAFDFWKGFTVVLPLVYLIRPNRDSTPLTITGLFFSVAFLIWLPGISDPGKRMATIFLTIVVIYCVLDPALLYNHMVRDVCFTLLFANAFSIIALLLPFPSPSLALLDVRVKLGMVRHRLGSILRGCNEAFSLGEEVHYSMLEQLLQETSATVADIKEQIPFVKWEAVLLRLPVSMPG------QLESFLTTIEAQLELFRGMRLSLRRMSNNATHQEFLKYLQEPLSQVVKASVAVSDAAARHIEAEL 516
F+ KL R ALA LAT S + W+H +TWFS+TL +SG +LG TL W G TV +PL +L++ S LT +F + +++ K+++ IF+T VV+ ++ P ++ D+ +L AN F + +L FPSP LA+ R +L ++ LG L +++ L ++ LE ++ E + + I+ +P V +E LL + +L +E QLE RGM ++L M NATH EF++ ++ L VV S V + H+ A L
Sbjct: 148 FYYKLLNASRPALACFLATGVSMVY-PWSHKVTWFSITLSISGVGRNLGHTLAGIRQQWMGITVAVPLCFLLKFLEFSKVLTAIAIFLVSVAVCGSDMLNEAAKQVSLIFITWVVLVALVTPDTTMEDLLLDLIKAVLGANIFCTVVML--FPSPRLAVRLCRWRLEELQEVLGRFLEDAVDSYCLQDDSGLHDLEAVIDEAVSLIETIRALLPDVDFELALLSCGCQRSASRRTYDHVVEYLGILEDQLENCRGMAVALSDMYPNATHSEFVRAMRPGLLDVVTESKKVLEGTCYHLSAAL 446 The following BLAST results are available for this feature:
BLAST of EWM22994.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 2
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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