EWM29911.1, cds764 (CDS) Nannochloropsis gaditana

Overview
NameEWM29911.1
Unique Namecds764
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:370034..370297 -
Alignment locationCM002456.1:368705..369877 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29911.1
ProductCDP-diacylglycerol pyrophosphatase
Orig transcript idgnl|cribi|Naga_100035g27.3375.mrna
GbkeyCDS
Noteencoded by transcript variant 2; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:370034..370297 -
CM002456.1supercontigCM002456.1:368705..369877 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0003824catalytic activity
GO:0008715CDP-diacylglycerol diphosphatase activity
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009058biosynthetic process
GO:0006629lipid metabolic process
GO:0008654phospholipid biosynthetic process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR011146HIT-like
IPR003763CDP-diacylglyc_Pase
Homology
[Close]
BLAST of EWM29911.1 vs. NCBI_GenBank
Match: gi|585112494|gb|EWM29911.1| (CDP-diacylglycerol pyrophosphatase [Nannochloropsis gaditana])

HSP 1 Score: 1001.5 bits (2588), Expect = 0.000e+0
Identity = 478/478 (100.00%), Postives = 478/478 (100.00%), Query Frame = 0 
Query:    1 MIAYHLGFPFSYRRLMLRPKRQELRNLALCSSLFLLLCRPCLSFSSLCRSFLPDTGSFSNEVQCNDRGIKWPLEFQYCLPENWGLQCGTCLQTCYFIPTFNDSYFLPFKYTFPSLKSFAQTCDVRTKGNNYNESDLGVYCCRPCKLYRLITEHCDAVHKTQNGEDQTCFEENKNTQAGLTFLRAQSSLDNSEETPHWLFIPPAPNRGIEDTRTDASLFQQAWRLAMDPSQYLKPIVHKSHGADGAQLFNSSVIPGKMGRTNVAIGINQADLRTQHQAHIHYAALPIPFRRHLNENARIPSGLKTCTVVSGFMYGEQNVTYFGWLFPWDLALLPEGKKYQAEKNKTGDVTAPLWTLRNLVLDMCPQLLDTLVKDALGMPILDPPTLPHAPVGSHPFAHAGDFQMAQVAVIIAPTTTLDPNTQRPSGHYVLMGSTATRFHAESLLCTQAAIDGIGSKKGWDPVTDCPVTAKEWPEPEGGR 478
            MIAYHLGFPFSYRRLMLRPKRQELRNLALCSSLFLLLCRPCLSFSSLCRSFLPDTGSFSNEVQCNDRGIKWPLEFQYCLPENWGLQCGTCLQTCYFIPTFNDSYFLPFKYTFPSLKSFAQTCDVRTKGNNYNESDLGVYCCRPCKLYRLITEHCDAVHKTQNGEDQTCFEENKNTQAGLTFLRAQSSLDNSEETPHWLFIPPAPNRGIEDTRTDASLFQQAWRLAMDPSQYLKPIVHKSHGADGAQLFNSSVIPGKMGRTNVAIGINQADLRTQHQAHIHYAALPIPFRRHLNENARIPSGLKTCTVVSGFMYGEQNVTYFGWLFPWDLALLPEGKKYQAEKNKTGDVTAPLWTLRNLVLDMCPQLLDTLVKDALGMPILDPPTLPHAPVGSHPFAHAGDFQMAQVAVIIAPTTTLDPNTQRPSGHYVLMGSTATRFHAESLLCTQAAIDGIGSKKGWDPVTDCPVTAKEWPEPEGGR
Sbjct:    1 MIAYHLGFPFSYRRLMLRPKRQELRNLALCSSLFLLLCRPCLSFSSLCRSFLPDTGSFSNEVQCNDRGIKWPLEFQYCLPENWGLQCGTCLQTCYFIPTFNDSYFLPFKYTFPSLKSFAQTCDVRTKGNNYNESDLGVYCCRPCKLYRLITEHCDAVHKTQNGEDQTCFEENKNTQAGLTFLRAQSSLDNSEETPHWLFIPPAPNRGIEDTRTDASLFQQAWRLAMDPSQYLKPIVHKSHGADGAQLFNSSVIPGKMGRTNVAIGINQADLRTQHQAHIHYAALPIPFRRHLNENARIPSGLKTCTVVSGFMYGEQNVTYFGWLFPWDLALLPEGKKYQAEKNKTGDVTAPLWTLRNLVLDMCPQLLDTLVKDALGMPILDPPTLPHAPVGSHPFAHAGDFQMAQVAVIIAPTTTLDPNTQRPSGHYVLMGSTATRFHAESLLCTQAAIDGIGSKKGWDPVTDCPVTAKEWPEPEGGR 478
[Close]
BLAST of EWM29911.1 vs. NCBI_GenBank
Match: gi|585112493|gb|EWM29910.1| (CDP-diacylglycerol pyrophosphatase [Nannochloropsis gaditana])

HSP 1 Score: 927.161 bits (2395), Expect = 0.000e+0
Identity = 450/478 (94.14%), Postives = 450/478 (94.14%), Query Frame = 0 
Query:    1 MIAYHLGFPFSYRRLMLRPKRQELRNLALCSSLFLLLCRPCLSFSSLCRSFLPDTGSFSNEVQCNDRGIKWPLEFQYCLPENWGLQCGTCLQTCYFIPTFNDSYFLPFKYTFPSLKSFAQTCDVRTKGNNYNESDLGVYCCRPCKLYRLITEHCDAVHKTQNGEDQTCFEENKNTQAGLTFLRAQSSLDNSEETPHWLFIPPAPNRGIEDTRTDASLFQQAWRLAMDPSQYLKPIVHKSHGADGAQLFNSSVIPGKMGRTNVAIGINQADLRTQHQAHIHYAALPIPFRRHLNENARIPSGLKTCTVVSGFMYGEQNVTYFGWLFPWDLALLPEGKKYQAEKNKTGDVTAPLWTLRNLVLDMCPQLLDTLVKDALGMPILDPPTLPHAPVGSHPFAHAGDFQMAQVAVIIAPTTTLDPNTQRPSGHYVLMGSTATRFHAESLLCTQAAIDGIGSKKGWDPVTDCPVTAKEWPEPEGGR 478
            MIAYHLGFPFSYRRLMLRPKRQELRNLALCSSLFLLLCRPCLSFSSLCRSFLPDTGSFSNEVQCNDRGIKWPLEFQYCLPENWGLQCG                            SFAQTCDVRTKGNNYNESDLGVYCCRPCKLYRLITEHCDAVHKTQNGEDQTCFEENKNTQAGLTFLRAQSSLDNSEETPHWLFIPPAPNRGIEDTRTDASLFQQAWRLAMDPSQYLKPIVHKSHGADGAQLFNSSVIPGKMGRTNVAIGINQADLRTQHQAHIHYAALPIPFRRHLNENARIPSGLKTCTVVSGFMYGEQNVTYFGWLFPWDLALLPEGKKYQAEKNKTGDVTAPLWTLRNLVLDMCPQLLDTLVKDALGMPILDPPTLPHAPVGSHPFAHAGDFQMAQVAVIIAPTTTLDPNTQRPSGHYVLMGSTATRFHAESLLCTQAAIDGIGSKKGWDPVTDCPVTAKEWPEPEGGR
Sbjct:    1 MIAYHLGFPFSYRRLMLRPKRQELRNLALCSSLFLLLCRPCLSFSSLCRSFLPDTGSFSNEVQCNDRGIKWPLEFQYCLPENWGLQCG----------------------------SFAQTCDVRTKGNNYNESDLGVYCCRPCKLYRLITEHCDAVHKTQNGEDQTCFEENKNTQAGLTFLRAQSSLDNSEETPHWLFIPPAPNRGIEDTRTDASLFQQAWRLAMDPSQYLKPIVHKSHGADGAQLFNSSVIPGKMGRTNVAIGINQADLRTQHQAHIHYAALPIPFRRHLNENARIPSGLKTCTVVSGFMYGEQNVTYFGWLFPWDLALLPEGKKYQAEKNKTGDVTAPLWTLRNLVLDMCPQLLDTLVKDALGMPILDPPTLPHAPVGSHPFAHAGDFQMAQVAVIIAPTTTLDPNTQRPSGHYVLMGSTATRFHAESLLCTQAAIDGIGSKKGWDPVTDCPVTAKEWPEPEGGR 450
The following BLAST results are available for this feature:
BLAST of EWM29911.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585112494|gb|EWM29911.1|0.000e+0100.00CDP-diacylglycerol pyrophosphatase [Nannochloropsi... [more]
gi|585112493|gb|EWM29910.1|0.000e+094.14CDP-diacylglycerol pyrophosphatase [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna764rna764Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications