EWM23038.1, cds7634 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23038.1 vs. NCBI_GenBank
Match: gi|585103843|gb|EWM23038.1| (Nucleotide-sugar transporter [Nannochloropsis gaditana]) HSP 1 Score: 752.281 bits (1941), Expect = 0.000e+0 Identity = 376/376 (100.00%), Postives = 376/376 (100.00%), Query Frame = 0 Query: 1 MSAGATNLPSPSSASSPSPPRRRRPAPRSTPSPPRRARGHRTSSVSRTGSVFQSGYFYMSLLALQFGLQPLLVRAFIPTSLPKMLVVMATESVKILLCALGLWVTETKDSRAKLWATWTVRESLRVAALPASLYALQNTMAQFGYQYLDSLSFNLLNQTKTLAAAVCLYVVMGRKQTPLQLVALGMLLVASIILNWPSASPASSPSYDPTTFTLGVLPVLLASLTSGVCAALTQKTLQGASRNSYLFSAELALYGQVCLSVIVVSKYFFSSPGTSSLSLPKNLSPLALLPVVINAAGGIIVGLVTKYAGGVKKGFALIAGIALTALCQSMMQRTPPSRGHLLAACLVGYSTFLHAKYNDAWYVERAKTRKSVEKNE 376 MSAGATNLPSPSSASSPSPPRRRRPAPRSTPSPPRRARGHRTSSVSRTGSVFQSGYFYMSLLALQFGLQPLLVRAFIPTSLPKMLVVMATESVKILLCALGLWVTETKDSRAKLWATWTVRESLRVAALPASLYALQNTMAQFGYQYLDSLSFNLLNQTKTLAAAVCLYVVMGRKQTPLQLVALGMLLVASIILNWPSASPASSPSYDPTTFTLGVLPVLLASLTSGVCAALTQKTLQGASRNSYLFSAELALYGQVCLSVIVVSKYFFSSPGTSSLSLPKNLSPLALLPVVINAAGGIIVGLVTKYAGGVKKGFALIAGIALTALCQSMMQRTPPSRGHLLAACLVGYSTFLHAKYNDAWYVERAKTRKSVEKNE Sbjct: 1 MSAGATNLPSPSSASSPSPPRRRRPAPRSTPSPPRRARGHRTSSVSRTGSVFQSGYFYMSLLALQFGLQPLLVRAFIPTSLPKMLVVMATESVKILLCALGLWVTETKDSRAKLWATWTVRESLRVAALPASLYALQNTMAQFGYQYLDSLSFNLLNQTKTLAAAVCLYVVMGRKQTPLQLVALGMLLVASIILNWPSASPASSPSYDPTTFTLGVLPVLLASLTSGVCAALTQKTLQGASRNSYLFSAELALYGQVCLSVIVVSKYFFSSPGTSSLSLPKNLSPLALLPVVINAAGGIIVGLVTKYAGGVKKGFALIAGIALTALCQSMMQRTPPSRGHLLAACLVGYSTFLHAKYNDAWYVERAKTRKSVEKNE 376
BLAST of EWM23038.1 vs. NCBI_GenBank
Match: gi|553194315|ref|XP_005855926.1| (hypothetical protein NGA_0559400 [Nannochloropsis gaditana CCMP526] >gi|422293127|gb|EKU20427.1| hypothetical protein NGA_0559400 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 244.202 bits (622), Expect = 1.002e-77 Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0 Query: 1 MSAGATNLPSPSSASSPSPPRRRRPAPRSTPSPPRRARGHRTSSVSRTGSVFQSGYFYMSLLALQFGLQPLLVRAFIPTSLPKMLVVMATESVKILLCALGLWVTETKDSRAKLWATWTVR 121 MSAGATNLPSPSSASSPSPPRRRRPAPRSTPSPPRRARGHRTSSVSRTGSVFQSGYFYMSLLALQFGLQPLLVRAFIPTSLPKMLVVMATESVKILLCALGLWVTETKDSRAKLWATWTVR Sbjct: 1 MSAGATNLPSPSSASSPSPPRRRRPAPRSTPSPPRRARGHRTSSVSRTGSVFQSGYFYMSLLALQFGLQPLLVRAFIPTSLPKMLVVMATESVKILLCALGLWVTETKDSRAKLWATWTVR 121
BLAST of EWM23038.1 vs. NCBI_GenBank
Match: gi|298705941|emb|CBJ29071.1| (UDP-galactose translocator, putative [Ectocarpus siliculosus]) HSP 1 Score: 213.386 bits (542), Expect = 1.051e-62 Identity = 152/323 (47.06%), Postives = 206/323 (63.78%), Query Frame = 0 Query: 49 GSVFQSGYFYMSLLALQFGLQPLLVRAFIPT-SLPKMLVVMATESVKILLCALGLWVTETKDSRAKLWATWTVRESLRVAALPASLYALQNTMAQFGYQYLDSLSFNLLNQTKTLAAAVCLYVVMGRKQTPLQLVALGMLLVASIILNWPSASPAS-----------SPSYDPTTFTLGVLPVLLASLTSGVCAALTQKTLQGASRNSYLFSAELALYGQVCLSVIVVSKYFFSSPGTSS--LSLPKNLSPLALLPVVINAAGGIIVGLVTKYAGGVKKGFALIAGIALTALCQSMMQRTPPSRGHLLAACLVGYSTFLHAKY 357 GSV + G +M +LALQFGLQP+L +A + S+ +M +++ TE KI LC +W + +K R L +WT+R SL AALPA+ YALQN ++Q Y LDSL+FNLLNQTKTL AA+CLY+VMG+KQ+ LQLVAL +LL A+++LN S+ S S + D LGVLPV+ A+L SG+ A+TQ+TLQ + RNS S ELA+YG + L + S S TS+ S + + +PV+ AAGG+IVG VTK+AG V+KGFALI GI +TA QS M+++ + H AA LV T+LHA + Sbjct: 9 GSVSRKGRIFMGMLALQFGLQPVLQKACVDKHSVDRMSLIIVTEMTKITLCVFVIWSSGSKVYRPML-ESWTLRGSLEAAALPAAGYALQNWLSQLAYMNLDSLTFNLLNQTKTLFAALCLYLVMGKKQSRLQLVALSLLLAAALLLNSGSSGGDSKAGTGERGLLTSEAEDSARLWLGVLPVMAAALMSGLMGAVTQRTLQRSGRNSSQLSLELAVYGVLTLLLTSGSGIGGSDAVTSAGRSSAFQGWTKWTCVPVLSQAAGGLIVGQVTKHAGSVQKGFALIGGILVTAAVQSTMEKSALTMTHWTAAALVAGGTYLHANF 330
BLAST of EWM23038.1 vs. NCBI_GenBank
Match: gi|1129177108|gb|OLP85441.1| (DNA replication licensing factor mcm5-A [Symbiodinium microadriaticum]) HSP 1 Score: 224.172 bits (570), Expect = 1.558e-61 Identity = 129/309 (41.75%), Postives = 194/309 (62.78%), Query Frame = 0 Query: 54 SGYFYMSLLALQFGLQPLLVRAFIPTSLPKMLVVMATESVKILLCALGLWVTETKDSRAKLWATWTVRESLRVAALPASLYALQNTMAQFGYQYLDSLSFNLLNQTKTLAAAVCLYVVMGRKQTPLQLVALGMLLVASIILNWPSASPASSPSYDP----TTFTLGVLPVLLASLTSGVCAALTQKTLQG-ASRNSYLFSAELALYGQVCLSVIVVSKYFFSSPGTSSLSLP-KNLSPLALLPVVINAAGGIIVGLVTKYAGGVKKGFALIAGIALTALCQSMMQRTPPSRGHLLAACLVGYSTFLHAK 356 S ++ LLA QFGLQPLL + +P + ++++ KIL+ L T+D A + W++RES+ A +PA ++++Q + Q G ++DSLSFNLLNQTKTL+AA+ Y+++GR+Q+ +Q AL +L V++++L S S F GVLPV++A+L+SG+ AA+TQ+TL+G A RNS+L+S EL+++G CL ++ S L P + S L+++PV+ A GGI+VGLVTKY+ VKKGFAL++GI LT L Q +++ P + HL AA LV ST LHA+ Sbjct: 739 SSLLFLVLLAAQFGLQPLLSKQLLPRGHLPQVFLLSSNFSKILISLSILMFGNTRDEIADIVRAWSLRESILKAGIPAIMFSMQGWLLQVGQAHIDSLSFNLLNQTKTLSAALMCYLLLGRRQSRIQCFALVLLFVSALLLGTKGCSSFKKHSLRDGSASDAFVFGVLPVVVAALSSGLTAAMTQRTLKGSAGRNSWLYSMELSMWGSACL----IAGVCMSDKRGRLLQGPYQGWSALSVVPVLTQAVGGILVGLVTKYSDSVKKGFALVSGIVLTTLAQCVLEDAPLTSWHLTAAVLVAISTVLHAQ 1043
BLAST of EWM23038.1 vs. NCBI_GenBank
Match: gi|219113353|ref|XP_002186260.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|209583110|gb|ACI65730.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 197.978 bits (502), Expect = 2.192e-57 Identity = 129/292 (44.18%), Postives = 176/292 (60.27%), Query Frame = 0 Query: 50 SVFQSGYFYMSLLALQFGLQPLLVRAFIPTSLPKMLVVMATESVKILLCALGLWVTETKDSRAKLWATWTVRESLRVAALPASLYALQNTMAQFGYQYLDSLSFNLLNQTKTLAAAVCLYVVMGRKQTPLQL-----VALGMLLVASIILNWPSASP-ASSPSYDPTTFTLGVLPVLLASLTSGVCAALTQKTLQ---GASRNSYLFSAELALYGQVCLSVIVV--SKYFFSSPGTSSL--SLPKNLSPLALLPVVINAAGGIIVGLVTKYAGGVKKGFALIAGIALTALCQ 328 S+ +S YM LLA+QFGLQP+L R F P + + VV+ E VK LL + +T + S W+VR + VAA+PA LYA+QN A YQ LD+L+FN+LNQTKTL+AA+C Y VMGRKQ+ Q+ + L L++ I+ N P AS+ ++D +T GV P+LLAS SG+ AL+Q LQ G RN YLFS EL C++ I+V + S+ G L + + +P+V+N+ GGI+VGLVTKYAG V+KGFALI GI ++ L Q Sbjct: 4 SLDRSALIYMLLLAVQFGLQPILTRRFTPPDITRSTVVLIQELVKGLLALSMMQITGSTKSALN---GWSVRTWISVAAVPAVLYAIQNMAALVAYQNLDALTFNVLNQTKTLSAALCCYFVMGRKQSLTQILALLLLLLSALIMEGIVGNDPGEDNFASATAWDAKHYTHGVAPILLASFISGLAGALSQSNLQSTAGGGRNPYLFSLEL------CVASILVLTASLAISTDGQHVLREGFWQGWTLPTFIPIVVNSVGGILVGLVTKYAGSVRKGFALIFGILVSGLIQ 286
BLAST of EWM23038.1 vs. NCBI_GenBank
Match: gi|294881054|ref|XP_002769221.1| (UDP-galactose translocator, putative [Perkinsus marinus ATCC 50983] >gi|239872499|gb|EER01939.1| UDP-galactose translocator, putative [Perkinsus marinus ATCC 50983]) HSP 1 Score: 207.223 bits (526), Expect = 3.551e-57 Identity = 137/349 (39.26%), Postives = 199/349 (57.02%), Query Frame = 0 Query: 12 SSASSPSPPRRRRPAPRSTPSPPRRARGHRTSSVSRTGSVFQSGYFYMSLLALQFGLQPLLVRAFIPTSLPKMLVVMATESVKILLCALGLWVTETKDSRAKLWATWTVRESLRVAALPASLYALQNTMAQFGYQYLDSLSFNLLNQTKTLAAAVCLYVVMGRKQTPLQLVALGMLLVASIILNWPSAS--PASSPSYDPTTFTLGVLPVLLASLTSGVCAALTQKTLQGASRNSYLFSAELALYGQVCLSVIVVSK-YFFSSPGTSSLSLPKNLSPLALLPVVINAAGGIIVGLVTKYAGGVKKGFALIAGIALTALCQSMMQRTPPSRGHLLAACLVGYSTFLHAKY 357 S SP+P + + + G + ++ G FYM+LLALQ+G QPL+ F P ++P +V TE VK L A+GL E S A WT+R S AALPA Y++QN Q +Q+LD L +NL+NQTK L+ A+ Y+ +G++Q+ QL ALGML VA+++++ AS P + +P LG++ VL AS SGV A++++ LQ SRNS+LFSAELA+Y SVI +S F ++ L + L+P+ A GGI VG VTKYAG V+KGF++IAGI TA +S++ P + +L+A L +T+++AKY Sbjct: 323 SKEESPAPNELTYEVDGQSSTDGKSDDGDAGPTQRSRTAISPRGLFYMALLALQYGSQPLITTTFTPRTIPSSAIVTITEIVKFFL-AIGLMFAEGSASSA--LQGWTLRGSFLAAALPAMSYSMQNICIQIAFQHLDPLVYNLVNQTKLLSTALLTYLFLGKRQSRHQLFALGMLFVAAVMISIGQASEPPEAQGERNP---RLGLICVLTASALSGVGASISELALQTYSRNSFLFSAELAVY-----SVIAISTGELFKEGHLPAVGLALQTWTM-LIPIFTAAMGGIFVGQVTKYAGSVQKGFSIIAGIIFTAFLRSVILYKPLTTELILSAPLTAVATYMYAKY 659
BLAST of EWM23038.1 vs. NCBI_GenBank
Match: gi|1210528571|dbj|GAX12768.1| (solute carrier family 35 (UDP-sugar transporter), member A1/2/3 [Fistulifera solaris]) HSP 1 Score: 192.2 bits (487), Expect = 1.569e-54 Identity = 122/317 (38.49%), Postives = 182/317 (57.41%), Query Frame = 0 Query: 58 YMSLLALQFGLQPLLVRAFIPTSLPKMLVVMATESVKILLCALGLWVTETKDSRAKLWATWTVRESLRVAALPASLYALQNTMAQFGYQYLDSLSFNLLNQTKTLAAAVCLYVVMGRKQTPLQLVAL-----------GMLLVASIILNWPSASPASSPSYD---PTTFTLGVLPVLLASLTSGVCAALTQKTLQGASRNSYLFSAELALYGQVCLSVIVV--SKYFFSSPGTSSLS--LPKNLSPLALLPVVINAAGGIIVGLVTKYAGGVKKGFALIAGIALTALCQSMMQ-RTPPSRGHLLAACLVGYSTFLHA 355 Y+ LLA+QFG QP+L R F P + + +V+ E VK L A L+++ W W+V L VA PA LY++QN + YQ LD+L+FN+LNQTKTL+AA+C Y+VMG+KQ+ Q+VAL G++ V +++ + ++ ++ + D T GV P+LLAS SG+ A+ QK LQ +RNSY FS EL C++ I++ + + G L N + +P+V NA GG++VGLVTKYAG V+KGFALI G+ L+ + Q++M+ S G ++ L S +LH+ Sbjct: 22 YLVLLAVQFGCQPILTRRFAPAGVNRSTIVLMQELVKFFLAATFLFLSGAARES---WKNWSVISWLAVALFPALLYSMQNLASIMAYQNLDALTFNVLNQTKTLSAALCTYLVMGKKQSQWQIVALFLLFLSALVMEGIVPVDALLGRFRASEQNTNRNQDRFNTHHLTYGVAPLLLASFISGLAGAVAQKNLQTGARNSYQFSMEL------CIATILILTASLLVAPDGKLILDNGFWHNWTLWTWIPIVTNAMGGVLVGLVTKYAGSVRKGFALIFGMLLSGVVQALMEPDIGVSAGQVVGGVLAATSLYLHS 329
BLAST of EWM23038.1 vs. NCBI_GenBank
Match: gi|357149704|ref|XP_003575204.1| (PREDICTED: CMP-sialic acid transporter 5 [Brachypodium distachyon] >gi|944064406|gb|KQJ99996.1| hypothetical protein BRADI_3g46580 [Brachypodium distachyon]) HSP 1 Score: 191.43 bits (485), Expect = 2.205e-54 Identity = 128/368 (34.78%), Postives = 202/368 (54.89%), Query Frame = 0 Query: 4 GATNLPSPSSASSPSPPRRRRPAPRSTPSPPRRARGHRTSSVSRTGSVFQSGYFYMSLLALQFGLQPLLVRAFIPTSLPKMLVVMATESVKILLCALGLWVTETKDSRAKLWATWTVRESLRVAALPASLYALQNTMAQFGYQYLDSLSFNLLNQTKTLAAAVCLYVVMGRKQTPLQLVALGMLLVASIILN-WPSASPASSPSYDPTTFTLGVLPVLLASLTSGVCAALTQKTLQGASRNSYLFSAELALYGQVCLSVIVVSKYFFSSPGTSSLS---LPKNLSPLALLPVVINAAGGIIVGLVTKYAGGVKKGFALIAGIALTALCQSMMQRTPPSRGHLLAACLVGYSTFLHAKYNDAWYVERAK 367 G+ + PSP++A+ P RRR A Y++LL LQ+G QPL+ + F+ + +V+A E +K++ CA+ L V E S K ++ W + SL + LPA++YALQN++ Q Y+ LDSL+F++LNQTK L A Y+++G++Q+P Q+ AL +L+ A+++L+ S + + G++PV +AS+ SG+ ++L Q Q SYL + E++ G +CL F SP ++ + L L+PV++NA GGI+VGLVT YAGGV+KGF +++ + +TAL Q + PPS L+A LV S F++ KY YV+R K Sbjct: 2 GSVSKPSPTAAA----PSRRRVA------------------------------LYLALLTLQYGAQPLISKRFVRREVIVTSLVLAIEVLKVM-CAVILLVAE--GSLKKQFSNWNLAGSLTASGLPAAIYALQNSLLQISYKNLDSLTFSILNQTKLLFTAFFTYLILGQRQSPKQIFALTLLISAAVLLSVGESTTKGLNGGSSEYVLLYGIIPVTVASVLSGLASSLCQWASQVKKHASYLMTIEMSFIGSMCLLAST-----FQSPDGEAMKKYGFFHEWTSLTLIPVLMNAVGGILVGLVTTYAGGVRKGFVIVSALLVTALLQFIFDGKPPSVYCLMALPLVMASIFIYQKYP---YVDRKK 324
BLAST of EWM23038.1 vs. NCBI_GenBank
Match: gi|1210530059|dbj|GAX11317.1| (solute carrier family 35 (UDP-sugar transporter), member A1/2/3 [Fistulifera solaris]) HSP 1 Score: 191.815 bits (486), Expect = 2.777e-54 Identity = 120/318 (37.74%), Postives = 179/318 (56.29%), Query Frame = 0 Query: 58 YMSLLALQFGLQPLLVRAFIPTSLPKMLVVMATESVKILLCALGLWVTETKDSRAKLWATWTVRESLRVAALPASLYALQNTMAQFGYQYLDSLSFNLLNQTKTLAAAVCLYVVMGRKQTPLQLVAL-----------GML----LVASIILNWPSASPASSPSYDPTTFTLGVLPVLLASLTSGVCAALTQKTLQGASRNSYLFSAELALYGQVCL-SVIVVSKYFFSSPGTSSL---SLPKNLSPLALLPVVINAAGGIIVGLVTKYAGGVKKGFALIAGIALTALCQSMMQ-RTPPSRGHLLAACLVGYSTFLHA 355 Y+ LLA+QFG QP+L R F P+ + + +V+ E VK L A L+V+ W W+V L VA PA LY++QN + YQ LD+L+FN+LNQTKTL+AA+C Y+VMG+ Q+ Q+VAL G++ L+ S N+ + + ++ T GV P+LLAS SG+ A+ QK LQ +RNSY FS EL C+ ++++++ +P + N + +P+ NA GG++VGLVTKYAG V KGFALI G+ L+ + Q+M++ S G ++ L S +LH+ Sbjct: 24 YLVLLAVQFGCQPILTRRFAPSGVNRSTIVLMQELVKFFLAATFLFVSGAARES---WKNWSVISWLAVALFPALLYSVQNLASIMAYQNLDALTFNVLNQTKTLSAALCTYLVMGKTQSQWQIVALFLLFLSALVMEGIVPVDALLGSFRTNYSQHTNRTKDRFNTHHLTYGVAPLLLASFISGLAGAVAQKNLQTGARNSYQFSMEL------CIATILILTGSLLVAPDGRMILEHGFWHNWTLWTWIPIFTNAIGGVLVGLVTKYAGSVSKGFALIFGMLLSGMVQAMIEPDIGVSAGQVVGGLLAATSLYLHS 332
BLAST of EWM23038.1 vs. NCBI_GenBank
Match: gi|1191663454|gb|OTG15423.1| (putative nucleotide-sugar transporter [Helianthus annuus]) HSP 1 Score: 189.119 bits (479), Expect = 1.826e-53 Identity = 118/306 (38.56%), Postives = 183/306 (59.80%), Query Frame = 0 Query: 56 YFYMSLLALQFGLQPLLVRAFIPTSLPKMLVVMATESVKILLCALGLWVTETKDSRAKLWATWTVRESLRVAALPASLYALQNTMAQFGYQYLDSLSFNLLNQTKTLAAAVCLYVVMGRKQTPLQLVALGMLLVASIILNWPSASPASSPSYDPTTFTL-GVLPVLLASLTSGVCAALTQKTLQGASRNSYLFSAELALYGQVCLSVIVVSKYFFSSPGTSSL---SLPKNLSPLALLPVVINAAGGIIVGLVTKYAGGVKKGFALIAGIALTALCQSMMQRTPPSRGHLLAACLVGYSTFLHAKY 357 +FY LL +Q+G QPLL + I + V+A E +K++ C GL + S K WT+ SL + LPA++YA+QN++ Q Y+ LDSL+F++LNQTK + A+ Y+++ ++Q+ Q+ AL +L++A+++L+ S S DP L G++PVL+AS+ SG+ +AL Q Q ++YL + E++L G +CL + S Y SP ++ +PL ++PV INA GGI+VGLVT YAGGV+KGF +++ + +TAL Q + PPS LLA LV S ++ KY Sbjct: 22 WFYSLLLTIQYGAQPLLTKRCIRQEVIVTSNVLACEIIKVI-C--GLVLMAKDGSLNKALKEWTLIGSLSASGLPAAIYAVQNSLLQISYKNLDSLTFSMLNQTKLIFTALFTYIILRQRQSIQQIGALFILILAAVLLSIGEGSRKDYGSDDPDKVVLYGIIPVLIASVLSGLASALCQWASQVKKHSAYLMTVEMSLVGSLCL---LASTY--KSPDGEAMRQHGFFHGWTPLTMIPVFINAVGGILVGLVTSYAGGVRKGFVIVSALCVTALLQFVFDGKPPSLFCLLALPLVMVSISIYQKY 319 The following BLAST results are available for this feature:
BLAST of EWM23038.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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