EWM23043.1, cds7631 (CDS) Nannochloropsis gaditana

Overview
NameEWM23043.1
Unique Namecds7631
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002472.1:476192..476227 +
Alignment locationCM002472.1:476416..476530 +
Alignment locationCM002472.1:476801..476907 +
Alignment locationCM002472.1:477056..477128 +
Alignment locationCM002472.1:477292..477425 +
Alignment locationCM002472.1:477587..477734 +
Alignment locationCM002472.1:478505..478676 +
Alignment locationCM002472.1:478878..479271 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23043.1
Productdna cross-link repair 1a protein
Orig transcript idgnl|cribi|Naga_100620g2.3337.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002472.1supercontigCM002472.1:476192..476227 +
CM002472.1supercontigCM002472.1:476416..476530 +
CM002472.1supercontigCM002472.1:476801..476907 +
CM002472.1supercontigCM002472.1:477056..477128 +
CM002472.1supercontigCM002472.1:477292..477425 +
CM002472.1supercontigCM002472.1:477587..477734 +
CM002472.1supercontigCM002472.1:478505..478676 +
CM002472.1supercontigCM002472.1:478878..479271 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR011084DRMBL
IPR001279Beta-lactamas-like
Homology
BLAST of EWM23043.1 vs. NCBI_GenBank
Match: gi|585103850|gb|EWM23043.1| (dna cross-link repair 1a protein [Nannochloropsis gaditana])

HSP 1 Score: 811.987 bits (2096), Expect = 0.000e+0
Identity = 392/392 (100.00%), Postives = 392/392 (100.00%), Query Frame = 0
Query:    1 MASQVERIKWIEGTSFLVDGFNFLSPKCSAYFLTHFHSDHYWGLRPSFCHGTIYCSDVTGALLVGKLGVKPQFVHTLPLEKPTTIQGVEVTLLDANHCPGAVMLLFHNKKTKSTILHTGDFRASEALTERTASWIRDRDLRVRILYLDTTYCNAKYTFPSQPSVLAALSRIAEREKAERPSTVFYVGTYSIGKERAVRAVAAGIGWSYLRNRKTARDACPSSPSSYTPWVNPQNGAKLYWVPYSEHSSYTELRSFVRAIRPRKIIPTVGAGDEKGVERQLKHFLADMDLSHDRSRLDRYLGRGEEKRLKILPPNKRRLEGGVGGKRKTFDFEKIDVEEQVLRWEELSKGLNSDGKAQERGRGWDEREFTSDTKEKGLGRKTVEVIVLDDDDN 392
            MASQVERIKWIEGTSFLVDGFNFLSPKCSAYFLTHFHSDHYWGLRPSFCHGTIYCSDVTGALLVGKLGVKPQFVHTLPLEKPTTIQGVEVTLLDANHCPGAVMLLFHNKKTKSTILHTGDFRASEALTERTASWIRDRDLRVRILYLDTTYCNAKYTFPSQPSVLAALSRIAEREKAERPSTVFYVGTYSIGKERAVRAVAAGIGWSYLRNRKTARDACPSSPSSYTPWVNPQNGAKLYWVPYSEHSSYTELRSFVRAIRPRKIIPTVGAGDEKGVERQLKHFLADMDLSHDRSRLDRYLGRGEEKRLKILPPNKRRLEGGVGGKRKTFDFEKIDVEEQVLRWEELSKGLNSDGKAQERGRGWDEREFTSDTKEKGLGRKTVEVIVLDDDDN
Sbjct:    1 MASQVERIKWIEGTSFLVDGFNFLSPKCSAYFLTHFHSDHYWGLRPSFCHGTIYCSDVTGALLVGKLGVKPQFVHTLPLEKPTTIQGVEVTLLDANHCPGAVMLLFHNKKTKSTILHTGDFRASEALTERTASWIRDRDLRVRILYLDTTYCNAKYTFPSQPSVLAALSRIAEREKAERPSTVFYVGTYSIGKERAVRAVAAGIGWSYLRNRKTARDACPSSPSSYTPWVNPQNGAKLYWVPYSEHSSYTELRSFVRAIRPRKIIPTVGAGDEKGVERQLKHFLADMDLSHDRSRLDRYLGRGEEKRLKILPPNKRRLEGGVGGKRKTFDFEKIDVEEQVLRWEELSKGLNSDGKAQERGRGWDEREFTSDTKEKGLGRKTVEVIVLDDDDN 392          
BLAST of EWM23043.1 vs. NCBI_GenBank
Match: gi|553194330|ref|XP_005855931.1| (hydrolase involved in interstrand cross-link repair [Nannochloropsis gaditana CCMP526] >gi|422293132|gb|EKU20432.1| hydrolase involved in interstrand cross-link repair [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 386.726 bits (992), Expect = 4.543e-132
Identity = 187/188 (99.47%), Postives = 187/188 (99.47%), Query Frame = 0
Query:  205 GWSYLRNRKTARDACPSSPSSYTPWVNPQNGAKLYWVPYSEHSSYTELRSFVRAIRPRKIIPTVGAGDEKGVERQLKHFLADMDLSHDRSRLDRYLGRGEEKRLKILPPNKRRLEGGVGGKRKTFDFEKIDVEEQVLRWEELSKGLNSDGKAQERGRGWDEREFTSDTKEKGLGRKTVEVIVLDDDDN 392
            GWSYLRNRKTARDACPSSPSSYTPWVNPQNGAKLYWVPYSEHSSYTELRSFVRAIRPRKIIPTVGAGDEKGVERQLKHFLADMDLSHDRSRLDRYLGRGEEKRLKILPPNKRRLEGGVGGKRKTFDFEKIDVEEQVLRWEELSKGLNSDGK QERGRGWDEREFTSDTKEKGLGRKTVEVIVLDDDDN
Sbjct:   36 GWSYLRNRKTARDACPSSPSSYTPWVNPQNGAKLYWVPYSEHSSYTELRSFVRAIRPRKIIPTVGAGDEKGVERQLKHFLADMDLSHDRSRLDRYLGRGEEKRLKILPPNKRRLEGGVGGKRKTFDFEKIDVEEQVLRWEELSKGLNSDGKVQERGRGWDEREFTSDTKEKGLGRKTVEVIVLDDDDN 223          
BLAST of EWM23043.1 vs. NCBI_GenBank
Match: gi|1208526585|gb|OWM80540.1| (hypothetical protein CDL15_Pgr019820 [Punica granatum])

HSP 1 Score: 214.927 bits (546), Expect = 1.465e-61
Identity = 123/290 (42.41%), Postives = 173/290 (59.66%), Query Frame = 0
Query:    9 KWIEGTSFLVDGFNFLSPK-CSAYFLTHFHSDHYWGLRPSFCHGTIYCSDVTGALLVGKLGVKPQFVHTLPLEKPTTIQGVEVTLLDANHCPGAVMLLFHNKKTKSTILHTGDFRASEALTERTASWIRDRDLRVRILYLDTTYCNAKYTFPSQPSVLAALSRIAEREKAERPSTVFYVGTYSIGKERAVRAVAAGIG--WSYLRNRKTARDACPS-SPSSYT---------PWVNP--QNGAKLYWVPYSEHSSYTELRSFVRAIRPRKIIPTVGAGDEKGVERQLKHF 283
            K I GT F VD F + S + CSAYFLTHFH+DHY GL   + HG IYC+ +T  L   ++G   +++ TL   +   I+G++VTLL+ANHCPGA ++ F     +   LHTGDFRAS+++     ++      RV +LYLDTTYCN KY FPS+  VL  + RI +++   +P T+  VG YSIGKER   +++  +G   +YL+  K    A  +  P+ +T           + P  ++   +Y VPYSEHSS+TELR FVR +RP KIIPTV  G+    E+   +F
Sbjct:  183 KRIPGTPFTVDAFRYGSIEGCSAYFLTHFHADHYGGLSKGWSHGPIYCTPLTARLPWPEIGCFCRWIRTLEFNEERVIEGIKVTLLEANHCPGAALIHFRLSNGQ-CYLHTGDFRASKSM----QAYPLLVKQRVNVLYLDTTYCNPKYKFPSREDVLNYVVRITKKQLMTQPRTLVVVGAYSIGKERVYLSISQALGSLSNYLKTYKDQYVALLAFRPTGWTFSEAVGNQLDLIRPTSKSNITIYGVPYSEHSSFTELREFVRFLRPEKIIPTVNVGNPSNREKMQSYF 467          
BLAST of EWM23043.1 vs. NCBI_GenBank
Match: gi|552835210|ref|XP_005848921.1| (hypothetical protein CHLNCDRAFT_144365 [Chlorella variabilis] >gi|307108579|gb|EFN56819.1| hypothetical protein CHLNCDRAFT_144365 [Chlorella variabilis])

HSP 1 Score: 213.772 bits (543), Expect = 9.394e-61
Identity = 139/344 (40.41%), Postives = 177/344 (51.45%), Query Frame = 0
Query:    1 MASQVERIKWIEGTSFLVDGFNFLSPKCSAYFLTHFHSDHYWGLRPSFCHGTIYCSDVTGALLVGKLGVKPQFVHTLPLEKPTTIQGVEVTLLDANHCPGAVMLLFHNKKTKSTILHTGDFRASEALTERTASWIRDRDLRVRILYLDTTYCNAKYTFPSQPSVLAALSRIAEREKAERP--STVFYVGTYSIGKERAVRAVAAGIGW----SYLRNRKTARDACPSSPSSYTPWVNPQN-------GAKLYWVPYSEHSSYTELRSFVRAIRP-------------------------RKIIPTVGAGDEKGVERQLKHFLADMDLSHDRSRLDRYLGRGEEK 306
            MASQVE IKW+ GT FLVDGF F  P C A+FLTH HSDH  GL  SF  G IYCS +T  LL   +G++P  +  LPL+ PTTI GVEV  +DANHCPGAVM LF   +  +TILHTGD R    + +  A   R  D    +L LDTTY   K+TFP Q  V+  + +   RE A  P  + +F VG+Y IGKERA     A +GW    S  + R       P++  +    V  +        G +L+    ++  + T  +  V AIRP                         R++IPTV A D       +  F   MDLS DRSRLD YL R  ++
Sbjct:    1 MASQVEAIKWVPGTPFLVDGFRFQHPACRAFFLTHMHSDHTTGLSRSFSAGPIYCSPITARLLRCDMGIRPDLIRILPLDLPTTICGVEVVPIDANHCPGAVMFLF---RAPTTILHTGDVRWQAGMAQHAALTGRQVD----VLMLDTTYSQRKWTFPPQEEVVELMVQAMAREAAAGPPGAVLFVVGSYHIGKERAYLGAGAALGWRVHCSPAKRRLLHMLGLPAAWLALLTDVAEEAQIHVLGMGEQLHPQALADRIAGTRWQRAV-AIRPTGWSWRPKGGLDVRTEGECVRALRPRRLIPTVDAADAAASRAVVDRFADLMDLSADRSRLDCYLRRQPQQ 336          
BLAST of EWM23043.1 vs. NCBI_GenBank
Match: gi|1205962288|ref|XP_021318004.1| (DNA cross-link repair protein SNM1 isoform X2 [Sorghum bicolor])

HSP 1 Score: 209.92 bits (533), Expect = 9.122e-60
Identity = 129/311 (41.48%), Postives = 168/311 (54.02%), Query Frame = 0
Query:    9 KWIEGTSFLVDGFNFLSPK-CSAYFLTHFHSDHYWGLRPSFCHGTIYCSDVTGALLVGKLGVKPQFVHTLPLEKPTTIQGVEVTLLDANHCPGAVMLLFHNKKTKSTILHTGDFRASEALTERTASWIRDRDLRVRILYLDTTYCNAKYTFPSQPSVLAALSRIAEREKAERPSTVFYVGTYSIGKERAVRAVAAGI-----------------GWSYLRNRKTARDACPSSPSSYTPW--VNPQNGAKLY----------------WVPYSEHSSYTELRSFVRAIRPRKIIPTVGAGDEKGVERQLKHF 283
            K I GT F VD F +   + CSAYFL+HFH DHY GL   +CHG IYCS +T  L+   L V   +++ L L+    I+GV VTLL+ANHCPGA ++ F     K T LHTGDFRAS+++       +  R  RV ++YLDTTYCN KY FP Q  V+  + R A+R   ++P T+  VG YSIGKE    A++  +                 GWS L  R  + +   SSP    P   VN +N  K                   VPYSEHSS+TELR FV  +RP+K+IPTV  G+    ++   HF
Sbjct:  160 KKIPGTPFTVDAFRYGQVEGCSAYFLSHFHHDHYGGLTKKWCHGPIYCSALTARLVKMCLSVNSDYIYPLELDTNYVIEGVTVTLLEANHCPGAALIHFQLSDGK-TYLHTGDFRASKSMQLHP---LLQRG-RVNLVYLDTTYCNPKYKFPPQEDVIDFVVRTAQRYLKKQPKTLIVVGAYSIGKENVYLAISQALEVPIYTDASRRRILHSFGWSDLSKRICSCNQ--SSPLHVLPLGSVNHENLKKYLETLSGRFLAVLAFRPTGVPYSEHSSFTELRDFVMFLRPQKVIPTVNVGNATSRDKMQAHF 463          
BLAST of EWM23043.1 vs. NCBI_GenBank
Match: gi|971535296|ref|XP_015163383.1| (PREDICTED: DNA cross-link repair protein SNM1 isoform X2 [Solanum tuberosum])

HSP 1 Score: 206.838 bits (525), Expect = 1.173e-59
Identity = 120/292 (41.10%), Postives = 164/292 (56.16%), Query Frame = 0
Query:    9 KWIEGTSFLVDGFNFLSPK-CSAYFLTHFHSDHYWGLRPSFCHGTIYCSDVTGALLVGKLGVKPQFVHTLPLEKPTTIQGVEVTLLDANHCPGAVMLLFHNKKTKSTILHTGDFRASEALTERTASWIRDRDLRVRILYLDTTYCNAKYTFPSQPSVLAALSRIAEREKAERPSTVFYVGTYSIGKERAVRAVAAGIGWSYLRNRKTARDACPSSPSSYTP--W------------VNP--QNGAKLYWVPYSEHSSYTELRSFVRAIRPRKIIPTVGAGDEKGVERQLKHF 283
            K I GT F VD F + S K CSAYFL+HFH+DHY GL   + HG IYC+++T  LL   L V P F+  L L    ++ G+++T+LDANHCPGA ++ F     +   LHTGDFRAS+ +     S+      R+ ILYLDTTYCN KY FPS+  VL  +  +  R     P T+  VG YSIGKE    A++  +G   L+    ++D   +S  S+ P  W            + P  +    +Y VPYSEHS++ EL+ FV+ +RP KIIPTV  G+     +   +F
Sbjct:   78 KRIAGTPFTVDAFCYGSVKGCSAYFLSHFHADHYIGLTKGWSHGPIYCTNLTARLLRICLYVSPSFICPLELGTEYSLNGIKITMLDANHCPGAALIHFRLPNGQC-YLHTGDFRASKLM----QSYPVLASQRINILYLDTTYCNPKYRFPSKEDVLEFVVGVTRRYLNNHPKTIVVVGAYSIGKEHVYSAISKALG--ILQRYLASQDGQYTSMLSFRPTGWTYSETIGENLNLIKPTSKGNITIYGVPYSEHSNFIELQEFVQFLRPEKIIPTVNVGNAVNRGKMQSYF 362          
BLAST of EWM23043.1 vs. NCBI_GenBank
Match: gi|545356950|ref|XP_005644152.1| (DRMBL-domain-containing protein, partial [Coccomyxa subellipsoidea C-169] >gi|384246117|gb|EIE19608.1| DRMBL-domain-containing protein, partial [Coccomyxa subellipsoidea C-169])

HSP 1 Score: 203.756 bits (517), Expect = 4.856e-59
Identity = 117/319 (36.68%), Postives = 160/319 (50.16%), Query Frame = 0
Query:   11 IEGTSFLVDGFNFLSPKCSAYFLTHFHSDHYWGLRPSFCHGTIYCSDVTGALLVGKLGVKPQFVHTLPLEKPTTIQGVEVTLLDANHCPGAVMLLFHNKK------TKSTILHTGDFRASEALTERTASWIRDRDLRVRILYLDTTYCNAKYTFPSQPSVLAALSRIAEREKAERPSTVFYVGTYSIGKERAVRAVAAGIGWSYLRNRK-----------------TARDACPS-----------SPSSYT------PWVNP-------------------QNGAKLYWVPYSEHSSYTELRSFVRAIRPRKIIPTVGA 270
            +  T F+VDGF F S +C  Y+L+H+HSDH  GL  SF  GTIYCS VT  LLV  + + P  +  LPL  P  + G+ VTL+DANHCPGAV+ LF          ++  ILHTGD R    +    A     ++ R+ +L+LDTTY + K+ FP Q   +A + R+ ++E   RP T+F +G+Y IGKERA    A  +GW    N                     RDA  +           +P + T      PW +                    +    +Y VPYSEHSS+ ELR  V+ +RPR+I+PTV A
Sbjct:    1 VPNTRFMVDGFRFQSSRCKHYWLSHYHSDHTTGLTTSFSSGTIYCSAVTANLLVKDMHINPSCIQPLPLNIPLLVDGINVTLIDANHCPGAVLFLFKTPPPPGSEFSEQVILHTGDMRWHPRMGRHPAL----KNQRIDMLFLDTTYASPKHVFPCQEDAIADIVRVMKQEAKARPGTLFIMGSYRIGKERAYLGAAKALGWKVHVNADKLRVLRLLGLPENDMALLTRDAAAARIHVSFMGKLLTPDALTDRIRAGPWTHVVAFRPTGWSFQKSGLSCRREGDVAIYGVPYSEHSSFAELRDCVKTLRPRRIVPTVNA 315          
BLAST of EWM23043.1 vs. NCBI_GenBank
Match: gi|1035907485|gb|OAY37082.1| (hypothetical protein MANES_11G073600 [Manihot esculenta])

HSP 1 Score: 202.601 bits (514), Expect = 3.241e-57
Identity = 123/290 (42.41%), Postives = 162/290 (55.86%), Query Frame = 0
Query:    9 KWIEGTSFLVDGFNFLSPK-CSAYFLTHFHSDHYWGLRPSFCHGTIYCSDVTGALLVGKLGVKPQFVHTLPLEKPTTIQGVEVTLLDANHCPGAVMLLFHNKKTKSTILHTGDFRASEALTERTASWIRDRDLRVRILYLDTTYCNAKYTFPSQPSVLAALSRIAEREKAERPSTVFYVGTYSIGKERAVRAVAAGIGW--SYLR---NRKTARDACPSSPSSYTPWVNPQ---------NGAKLYWVPYSEHSSYTELRSFVRAIRPRKIIPTVGAGDEKGVERQLKHF 283
            K I GT F VD F + S + CSAYFLTHFH DHY GL   + HG IYC+ +T  LL   L V   +VH L L     I GV VTLL+A HCPGA ++ F    T    LHTGDFRAS+ +     S+      +V +LYLDTTYCN KY FPS+  VL  + R+ +     +P T+  VG YSIGKE    A++  +G    YL+   N+  A  A   +  +Y+  V  Q             +Y VPYSEHSS++EL+ FV+ ++P KIIPTV  G+    ++   +F
Sbjct:  145 KRIPGTPFAVDAFRYGSIQGCSAYFLTHFHFDHYGGLTKGWSHGLIYCTRLTARLLTLCLSVNSSYVHPLDLNTEYVIGGVSVTLLEALHCPGAALIHFR-LPTGLCYLHTGDFRASKCM----QSYALLLKQKVNVLYLDTTYCNPKYNFPSKEDVLDYVVRVTKDFLKRQPKTLVVVGAYSIGKECVYLAISKALGTLKDYLKNFVNQYAAVLAFRPTGWTYSESVGKQLDQIRPISKGNVTIYGVPYSEHSSFSELKEFVKFLKPDKIIPTVNVGNPATRDKMQSYF 429          
BLAST of EWM23043.1 vs. NCBI_GenBank
Match: gi|355562792|gb|EHH19386.1| (hypothetical protein EGK_20079 [Macaca mulatta] >gi|355783112|gb|EHH65033.1| hypothetical protein EGM_18373 [Macaca fascicularis])

HSP 1 Score: 211.075 bits (536), Expect = 6.366e-57
Identity = 131/334 (39.22%), Postives = 170/334 (50.90%), Query Frame = 0
Query:    9 KWIEGTSFLVDGFNF-LSPKCSAYFLTHFHSDHYWGLRPSFCHGTIYCSDVTGALLVGKLGVKPQFVHTLPLEKPTTIQGVEVTLLDANHCPGAVMLLFHNKKTKSTILHTGDFRASEALTERTASWIRDRDLRVRILYLDTTYCNAKYTFPSQPSVLAALSRIAEREKAERPSTVFYVGTYSIGKERAVRAVAAGIG---------WSYLR-------NRKTARDACPS--------------------------------SPSSYTPW--------VNPQNGAKL--YWVPYSEHSSYTELRSFVRAIRPRKIIPTVGAGDEKGVERQLKHF 283
            K I GT F VD F + +   C+AYFLTHFHSDHY GL   F    +YCS++TG LL  KL V+ Q++HTLPL+    + GV+V LLDANHCPGAVM+LF+     + ILHTGDFRA  ++     +     D +V +LYLDTTYC+ +YTFPSQ  V+      A       P T+   GTYSIGKE+   A+A  +G         +  LR       N     D C S                                 P+ +T          V PQ    +  Y +PYSEHSSY E++ FV+ ++P+KIIPTV  G  K      K+F
Sbjct:  704 KKIPGTGFTVDAFQYGMVEGCTAYFLTHFHSDHYAGLSKHFTF-PVYCSEITGNLLKNKLHVQEQYIHTLPLDIECVVNGVKVVLLDANHCPGAVMILFY-LPNGTVILHTGDFRADPSMEHSLLA-----DQKVHMLYLDTTYCSPEYTFPSQQEVIQFAINTAFEALTLNPHTLVVCGTYSIGKEKVFLAIADVLGSKVGMSQEKYKTLRCLNIPEINSLITTDMCSSLVHLLPMMQINFKGLQNHLKKYGGKYNQILAFRPTGWTHSNKFPRIADVIPQTKGNISIYGIPYSEHSSYLEMKRFVQWLKPQKIIPTVNVGTWKSRNTMEKYF 1030          
BLAST of EWM23043.1 vs. NCBI_GenBank
Match: gi|109090605|ref|XP_001090942.1| (PREDICTED: DNA cross-link repair 1A protein [Macaca mulatta] >gi|966964783|ref|XP_015003704.1| PREDICTED: DNA cross-link repair 1A protein [Macaca mulatta] >gi|966964785|ref|XP_015003706.1| PREDICTED: DNA cross-link repair 1A protein [Macaca mulatta])

HSP 1 Score: 210.69 bits (535), Expect = 7.815e-57
Identity = 131/334 (39.22%), Postives = 171/334 (51.20%), Query Frame = 0
Query:    9 KWIEGTSFLVDGFNF-LSPKCSAYFLTHFHSDHYWGLRPSFCHGTIYCSDVTGALLVGKLGVKPQFVHTLPLEKPTTIQGVEVTLLDANHCPGAVMLLFHNKKTKSTILHTGDFRASEALTERTASWIRDRDLRVRILYLDTTYCNAKYTFPSQPSVLAALSRIAEREKAERPSTVFYVGTYSIGKERAVRAVAAGIG---------WSYLR-------NRKTARDACPS--------------------------------SPSSYT-----PWVN---PQNGAKL--YWVPYSEHSSYTELRSFVRAIRPRKIIPTVGAGDEKGVERQLKHF 283
            K I GT F VD F + +   C+AYFLTHFHSDHY GL   F    +YCS++TG LL  KL V+ Q++HTLPL+    + GV+V LLDANHCPGAVM+LF+     + ILHTGDFRA  ++     +     D +V +LYLDTTYC+ +YTFPSQ  V+      A       P T+   GTYSIGKE+   A+A  +G         +  LR       N     D C S                                 P+ +T     P +    PQ    +  Y +PYSEHSSY E++ FV+ ++P+KIIPTV  G  K      K+F
Sbjct:  704 KKIPGTGFTVDAFQYGMVEGCTAYFLTHFHSDHYAGLSKHFTF-PVYCSEITGNLLKNKLHVQEQYIHTLPLDIECVVNGVKVVLLDANHCPGAVMILFY-LPNGTVILHTGDFRADPSMEHSLLA-----DQKVHMLYLDTTYCSPEYTFPSQQEVIQFAINTAFEALTLNPHTLVVCGTYSIGKEKVFLAIADVLGSKVGMSQEKYKTLRCLNIPEINSLITTDMCSSLVHLLPMMQINFKGLQNHLKKYGGKYNQILAFRPTGWTHSNKFPRIADVIPQTKGNISIYGIPYSEHSSYLEMKRFVQWLKPQKIIPTVNVGTWKSRNTMEKYF 1030          
The following BLAST results are available for this feature:
BLAST of EWM23043.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585103850|gb|EWM23043.1|0.000e+0100.00dna cross-link repair 1a protein [Nannochloropsis ... [more]
gi|553194330|ref|XP_005855931.1|4.543e-13299.47hydrolase involved in interstrand cross-link repai... [more]
gi|1208526585|gb|OWM80540.1|1.465e-6142.41hypothetical protein CDL15_Pgr019820 [Punica grana... [more]
gi|552835210|ref|XP_005848921.1|9.394e-6140.41hypothetical protein CHLNCDRAFT_144365 [Chlorella ... [more]
gi|1205962288|ref|XP_021318004.1|9.122e-6041.48DNA cross-link repair protein SNM1 isoform X2 [Sor... [more]
gi|971535296|ref|XP_015163383.1|1.173e-5941.10PREDICTED: DNA cross-link repair protein SNM1 isof... [more]
gi|545356950|ref|XP_005644152.1|4.856e-5936.68DRMBL-domain-containing protein, partial [Coccomyx... [more]
gi|1035907485|gb|OAY37082.1|3.241e-5742.41hypothetical protein MANES_11G073600 [Manihot escu... [more]
gi|355562792|gb|EHH19386.1|6.366e-5739.22hypothetical protein EGK_20079 [Macaca mulatta] >g... [more]
gi|109090605|ref|XP_001090942.1|7.815e-5739.22PREDICTED: DNA cross-link repair 1A protein [Macac... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7651rna7651Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications