EWM23045.1, cds7627 (CDS) Nannochloropsis gaditana

Overview
NameEWM23045.1
Unique Namecds7627
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002472.1:466613..467030 +
Alignment locationCM002472.1:467131..467193 +
Alignment locationCM002472.1:467297..467405 +
Alignment locationCM002472.1:467571..467625 +
Alignment locationCM002472.1:467734..467796 +
Alignment locationCM002472.1:467931..468031 +
Alignment locationCM002472.1:468186..468324 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23045.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100570g2.9714.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002472.1supercontigCM002472.1:466613..467030 +
CM002472.1supercontigCM002472.1:467131..467193 +
CM002472.1supercontigCM002472.1:467297..467405 +
CM002472.1supercontigCM002472.1:467571..467625 +
CM002472.1supercontigCM002472.1:467734..467796 +
CM002472.1supercontigCM002472.1:467931..468031 +
CM002472.1supercontigCM002472.1:468186..468324 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM23045.1 vs. NCBI_GenBank
Match: gi|585103854|gb|EWM23045.1| (hypothetical protein Naga_100570g2 [Nannochloropsis gaditana])

HSP 1 Score: 631.713 bits (1628), Expect = 0.000e+0
Identity = 315/315 (100.00%), Postives = 315/315 (100.00%), Query Frame = 0 
Query:    1 MPSMWSTPGPRRPKLSIIVLGIFFLPSVQGFLHPPLPALLQISYPLSAGRSSSSSGGQQAPTEHVNQQKRRKQPLGPEIGSQSDEEKGKAQANADSPLSPSNPPDRSSPALSPSAAARLERLPDDTEERIEVVRVPDFEEMLAWAIRMDARVERRRIAGLGGLVAEPPSPQVDLTKRRPLSKRDEDKMNTVIRMLSQRAESKRVFYPNEMEELREALRDMESLMKDDAEHLKKAQQDALILNKAGRAKSRFQKKREVMIEETGDFDPIYGSKEVRDQIYLYLWSLVKREPRLLVTPWSEGEEEEGKDGRGEQEGD 315
            MPSMWSTPGPRRPKLSIIVLGIFFLPSVQGFLHPPLPALLQISYPLSAGRSSSSSGGQQAPTEHVNQQKRRKQPLGPEIGSQSDEEKGKAQANADSPLSPSNPPDRSSPALSPSAAARLERLPDDTEERIEVVRVPDFEEMLAWAIRMDARVERRRIAGLGGLVAEPPSPQVDLTKRRPLSKRDEDKMNTVIRMLSQRAESKRVFYPNEMEELREALRDMESLMKDDAEHLKKAQQDALILNKAGRAKSRFQKKREVMIEETGDFDPIYGSKEVRDQIYLYLWSLVKREPRLLVTPWSEGEEEEGKDGRGEQEGD
Sbjct:    1 MPSMWSTPGPRRPKLSIIVLGIFFLPSVQGFLHPPLPALLQISYPLSAGRSSSSSGGQQAPTEHVNQQKRRKQPLGPEIGSQSDEEKGKAQANADSPLSPSNPPDRSSPALSPSAAARLERLPDDTEERIEVVRVPDFEEMLAWAIRMDARVERRRIAGLGGLVAEPPSPQVDLTKRRPLSKRDEDKMNTVIRMLSQRAESKRVFYPNEMEELREALRDMESLMKDDAEHLKKAQQDALILNKAGRAKSRFQKKREVMIEETGDFDPIYGSKEVRDQIYLYLWSLVKREPRLLVTPWSEGEEEEGKDGRGEQEGD 315
The following BLAST results are available for this feature:
BLAST of EWM23045.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585103854|gb|EWM23045.1|0.000e+0100.00hypothetical protein Naga_100570g2 [Nannochloropsi... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7647rna7647Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications