EWM23056.1, cds7617 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23056.1 vs. NCBI_GenBank
Match: gi|585103868|gb|EWM23056.1| (protein transport protein sec13, partial [Nannochloropsis gaditana]) HSP 1 Score: 507.294 bits (1305), Expect = 0.000e+0 Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 0
Query: 1 MNPYGQHQQQQMFYGQPPQQQQQQQPYGAGGYAHPQQQQYPPQAPSQAYGGYMQQPQQPTGYPPQQAYPPQAQPQQFSPAQIPAQPSYQPQPVPQVQEPQYSQIPPAAGSSALPTQVTAGPGGDMSMETQHEDMIHDAQLDYYGKKLATCSSDRTIKIFEVTGGQTPSSSPPYTIQAHSGPVWQVAWAHPRWGCLVASASYDGTVLIHRENKEQGVWDTGVVHQGLENQSVNSIAFVRLPPSLSPFLPPSLPPSFLPSL 259
MNPYGQHQQQQMFYGQPPQQQQQQQPYGAGGYAHPQQQQYPPQAPSQAYGGYMQQPQQPTGYPPQQAYPPQAQPQQFSPAQIPAQPSYQPQPVPQVQEPQYSQIPPAAGSSALPTQVTAGPGGDMSMETQHEDMIHDAQLDYYGKKLATCSSDRTIKIFEVTGGQTPSSSPPYTIQAHSGPVWQVAWAHPRWGCLVASASYDGTVLIHRENKEQGVWDTGVVHQGLENQSVNSIAFVRLPPSLSPFLPPSLPPSFLPSL
Sbjct: 1 MNPYGQHQQQQMFYGQPPQQQQQQQPYGAGGYAHPQQQQYPPQAPSQAYGGYMQQPQQPTGYPPQQAYPPQAQPQQFSPAQIPAQPSYQPQPVPQVQEPQYSQIPPAAGSSALPTQVTAGPGGDMSMETQHEDMIHDAQLDYYGKKLATCSSDRTIKIFEVTGGQTPSSSPPYTIQAHSGPVWQVAWAHPRWGCLVASASYDGTVLIHRENKEQGVWDTGVVHQGLENQSVNSIAFVRLPPSLSPFLPPSLPPSFLPSL 259
BLAST of EWM23056.1 vs. NCBI_GenBank
Match: gi|1023190906|gb|KZS88497.1| (WD40 repeat-like protein [Sistotremastrum niveocremeum HHB9708] >gi|1023237500|gb|KZT33486.1| WD40 repeat-like protein [Sistotremastrum suecicum HHB10207 ss-3]) HSP 1 Score: 143.28 bits (360), Expect = 2.595e-37 Identity = 71/128 (55.47%), Postives = 92/128 (71.88%), Query Frame = 0
Query: 113 LPTQVT-AGPGGDMSMETQHEDMIHDAQLDYYGKKLATCSSDRTIKIFEVTGGQTPSSSPPYTIQAHSGPVWQVAWAHPRWGCLVASASYDGTVLIHRENKEQ---GVWDTGVVHQGLENQSVNSIAF 236
+ TQ T GG + +ET H+DMIHDAQLDYYGK+LATCSSDRTIK+F+V GQ SSP T++ HSGPVWQVAWAHP++G ++AS SYDG VLI +E+++ G W + L SVNS+++
Sbjct: 1 MSTQATDIASGGSLPIETAHDDMIHDAQLDYYGKRLATCSSDRTIKVFDVVDGQQQKSSPGQTLKGHSGPVWQVAWAHPKYGHILASCSYDGKVLIWKEDQQSQQGGTW-LKMKEHSLHTASVNSVSW 127
BLAST of EWM23056.1 vs. NCBI_GenBank
Match: gi|1035383160|gb|OAX39702.1| (WD40 repeat-like protein [Rhizopogon vinicolor AM-OR11-026]) HSP 1 Score: 139.428 bits (350), Expect = 7.881e-36 Identity = 72/133 (54.14%), Postives = 90/133 (67.67%), Query Frame = 0
Query: 127 METQHEDMIHDAQLDYYGKKLATCSSDRTIKIFEVTGGQTPSSSPPYTIQAHSGPVWQVAWAHPRWGCLVASASYDGTVLIHRENKEQGVWDTGVVHQGLENQSVNSIAFVRLPPSLSPFLPPSLPPSFLPSL 259
+ET HEDMIHDAQLDYYGK+LATCSSDRT+K+F+V G+T S S +T++ H+GPVWQVAWAHP++G ++AS SYDG VLI RE G W T V L SVNS+++ P L L + L L
Sbjct: 12 IETAHEDMIHDAQLDYYGKRLATCSSDRTVKVFDVIDGET-SKSSGHTLKGHTGPVWQVAWAHPKFGHILASCSYDGKVLIWREQAAGG-W-TKVKEHTLHTASVNSVSWA--PHELGAILACASSDGKLSVL 139
BLAST of EWM23056.1 vs. NCBI_GenBank
Match: gi|648153039|gb|KDR66878.1| (hypothetical protein GALMADRAFT_258759 [Galerina marginata CBS 339.88]) HSP 1 Score: 139.428 bits (350), Expect = 1.022e-35 Identity = 67/114 (58.77%), Postives = 88/114 (77.19%), Query Frame = 0
Query: 127 METQHEDMIHDAQLDYYGKKLATCSSDRTIKIFEVTGGQTPSSSPPYTIQAHSGPVWQVAWAHPRWGCLVASASYDGTVLIHRENKEQGVWDTG----VVHQGLENQSVNSIAF 236
+ET HEDMIHDAQLDYYGK+LATCSSDRT+K+F+V G+T SSP +T++ H+GPVWQVAWAHP++G ++AS+SYDG VLI +E + QG TG + L SVNS+++
Sbjct: 12 IETAHEDMIHDAQLDYYGKRLATCSSDRTVKVFDVVDGET-RSSPGHTLKGHTGPVWQVAWAHPKYGHILASSSYDGKVLIWKEQQSQGN-STGGWIKIKEHTLHTASVNSVSW 123
BLAST of EWM23056.1 vs. NCBI_GenBank
Match: gi|1021837597|gb|KZP25899.1| (WD40 repeat-like protein [Fibularhizoctonia sp. CBS 109695]) HSP 1 Score: 135.576 bits (340), Expect = 2.968e-35 Identity = 69/137 (50.36%), Postives = 93/137 (67.88%), Query Frame = 0
Query: 127 METQHEDMIHDAQLDYYGKKLATCSSDRTIKIFEVTGGQTPSSSPPYTIQAHSGPVWQVAWAHPRWGCLVASASYDGTVLIHRENKEQGV----WDTGVVHQGLENQSVNSIAFVRLPPSLSPFLPPSLPPSFLPSL 259
+ET H+DMIHDAQLDYYGK+LATCSSDRT+K+F+V G T S+ +T++ H+GPVWQVAWAHP++G ++AS+SYDG VLI +E + QG W T + L + SVNS+++ P L L + L L
Sbjct: 12 IETAHDDMIHDAQLDYYGKRLATCSSDRTVKVFDVVDGDTQRSA-GHTLKGHTGPVWQVAWAHPKYGHILASSSYDGKVLIWKEQQGQGASAGGW-TKIKEHTLHSASVNSVSWA--PHELGAILACASSDGKLSVL 144
BLAST of EWM23056.1 vs. NCBI_GenBank
Match: gi|751051285|gb|KIK86600.1| (hypothetical protein PAXRUDRAFT_831899 [Paxillus rubicundulus Ve08.2h10]) HSP 1 Score: 137.502 bits (345), Expect = 4.247e-35 Identity = 69/136 (50.74%), Postives = 89/136 (65.44%), Query Frame = 0
Query: 127 METQHEDMIHDAQLDYYGKKLATCSSDRTIKIFEVTGGQTPSSSPPYTIQAHSGPVWQVAWAHPRWGCLVASASYDGTVLIHRENKE---QGVWDTGVVHQGLENQSVNSIAFVRLPPSLSPFLPPSLPPSFLPSL 259
+ET HEDMIHDAQLDYYGK+LATCSSDRT+K+F+V G+ S+ T++ H+GPVWQVAWAHP++G ++AS SYDG VL+ RE + G W T V + SVNSI++ P L L + L L
Sbjct: 12 IETAHEDMIHDAQLDYYGKRLATCSSDRTVKVFDVVDGEASKSTIGQTLKGHTGPVWQVAWAHPKFGNILASCSYDGKVLVWREQTQGPSAGGW-TKVKEHAMHTASVNSISWA--PHELGAILACASSDGKLSVL 144
BLAST of EWM23056.1 vs. NCBI_GenBank
Match: gi|751003783|gb|KIK45891.1| (hypothetical protein CY34DRAFT_801043 [Suillus luteus UH-Slu-Lm8-n1]) HSP 1 Score: 136.346 bits (342), Expect = 9.372e-35 Identity = 72/136 (52.94%), Postives = 91/136 (66.91%), Query Frame = 0
Query: 127 METQHEDMIHDAQLDYYGKKLATCSSDRTIKIFEVTGGQTPSSSPPYTIQAHSGPVWQVAWAHPRWGCLVASASYDGTVLIHRENKEQGVWDTG---VVHQGLENQSVNSIAFVRLPPSLSPFLPPSLPPSFLPSL 259
+ET HEDMIHDAQLDYYGK+LATCSSDRT+K+F+V GG+ P S +T++ H+GPVWQVAWAHP++G ++AS SYDG VLI E + QG D G V L SVNS+++ P L L + L L
Sbjct: 12 IETAHEDMIHDAQLDYYGKRLATCSSDRTVKVFDVIGGE-PLKSSGHTLKGHTGPVWQVAWAHPKFGHILASCSYDGKVLIWGE-RSQGTADGGWTRVKEHTLHTASVNSVSWA--PHELGAMLACASSDGKLSVL 143
BLAST of EWM23056.1 vs. NCBI_GenBank
Match: gi|749899794|gb|KIJ67346.1| (hypothetical protein HYDPIDRAFT_127263 [Hydnomerulius pinastri MD-312]) HSP 1 Score: 135.961 bits (341), Expect = 1.675e-34 Identity = 70/136 (51.47%), Postives = 89/136 (65.44%), Query Frame = 0
Query: 127 METQHEDMIHDAQLDYYGKKLATCSSDRTIKIFEVTGGQTPSSSPPYTIQAHSGPVWQVAWAHPRWGCLVASASYDGTVLIHRENKE---QGVWDTGVVHQGLENQSVNSIAFVRLPPSLSPFLPPSLPPSFLPSL 259
+ET HEDMIHDAQLDYYGK+LATCSSDRT+K+F+V G+ S+ T++ H+GPVWQVAWAHP++G ++AS SYDG VLI RE + G W T V L SVNS+++ P L L + L L
Sbjct: 12 IETAHEDMIHDAQLDYYGKRLATCSSDRTVKVFDVVDGEPSKSTGGQTLKGHTGPVWQVAWAHPKFGNILASCSYDGKVLIWREQSQGPATGGW-TKVKEHTLHTASVNSVSWA--PHELGAILACASSDGKLSVL 144
BLAST of EWM23056.1 vs. NCBI_GenBank
Match: gi|568444126|ref|XP_006457176.1| (hypothetical protein AGABI2DRAFT_196016 [Agaricus bisporus var. bisporus H97] >gi|598001223|ref|XP_007334668.1| hypothetical protein AGABI1DRAFT_116784 [Agaricus bisporus var. burnettii JB137-S8] >gi|409074311|gb|EKM74713.1| hypothetical protein AGABI1DRAFT_116784 [Agaricus bisporus var. burnettii JB137-S8] >gi|426192383|gb|EKV42320.1| hypothetical protein AGABI2DRAFT_196016 [Agaricus bisporus var. bisporus H97]) HSP 1 Score: 135.576 bits (340), Expect = 1.942e-34 Identity = 61/110 (55.45%), Postives = 82/110 (74.55%), Query Frame = 0
Query: 127 METQHEDMIHDAQLDYYGKKLATCSSDRTIKIFEVTGGQTPSSSPPYTIQAHSGPVWQVAWAHPRWGCLVASASYDGTVLIHRENKEQGVWDTGVVHQGLENQSVNSIAF 236
+ET HEDM+HDAQLDYYGK+LATCSSDRT+++F+V G+ SS +T++ H+GPVWQV WAHP++G ++AS SYDG VLI ++ QG W + L SVNSI++
Sbjct: 10 IETSHEDMVHDAQLDYYGKRLATCSSDRTVRVFDVVDGEPQRSSSGHTLKGHTGPVWQVGWAHPKYGNILASCSYDGKVLIWKDQTPQGGW-IKIGEHSLHTASVNSISW 118
BLAST of EWM23056.1 vs. NCBI_GenBank
Match: gi|1103356226|gb|OJA18963.1| (hypothetical protein AZE42_06043 [Rhizopogon vesiculosus]) HSP 1 Score: 140.969 bits (354), Expect = 2.315e-34 Identity = 67/110 (60.91%), Postives = 84/110 (76.36%), Query Frame = 0
Query: 127 METQHEDMIHDAQLDYYGKKLATCSSDRTIKIFEVTGGQTPSSSPPYTIQAHSGPVWQVAWAHPRWGCLVASASYDGTVLIHRENKEQGVWDTGVVHQGLENQSVNSIAF 236
+ET HEDMIHDAQLDYYGK+LATCSSDRT+K+F+V G+ PS S +T++ H+GPVWQVAWAHP++G ++AS SYDG VLI RE G W T V L SVNS+++
Sbjct: 12 IETAHEDMIHDAQLDYYGKRLATCSSDRTVKVFDVIDGE-PSKSSGHTLKGHTGPVWQVAWAHPKFGHILASCSYDGKVLIWREQPAGG-W-TKVKEHTLHTASVNSVSW 118 The following BLAST results are available for this feature:
BLAST of EWM23056.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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