EWM23085.1, cds7588 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23085.1 vs. NCBI_GenBank
Match: gi|585103939|gb|EWM23085.1| (malic enzyme, partial [Nannochloropsis gaditana]) HSP 1 Score: 545.814 bits (1405), Expect = 0.000e+0 Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0
Query: 1 MLAHAARLPGLSGLPPRHAFSTLSRVSLSPLAMIGGRCQGRRQDGVGNHQQRQVGSPRRAFSSQHHSTQSLTCPLHPVHWKGHNYKPLLVKKRGVDIVQDPLYNKGTGFQHGERDRLNIRGLLPPRYLDFKTQIDRVMSNLRNQGDDMRKHIYLTELHDRNETLFHRVIVDNIEELAPIIYTPTVGRACVEFGQHFRRPRGMYFSTMDRGHFASMMYNWPQREVHVIVVTDGSRILGLGDLGANGAGIPIGKLALYCAAGKEK 263
MLAHAARLPGLSGLPPRHAFSTLSRVSLSPLAMIGGRCQGRRQDGVGNHQQRQVGSPRRAFSSQHHSTQSLTCPLHPVHWKGHNYKPLLVKKRGVDIVQDPLYNKGTGFQHGERDRLNIRGLLPPRYLDFKTQIDRVMSNLRNQGDDMRKHIYLTELHDRNETLFHRVIVDNIEELAPIIYTPTVGRACVEFGQHFRRPRGMYFSTMDRGHFASMMYNWPQREVHVIVVTDGSRILGLGDLGANGAGIPIGKLALYCAAGKEK
Sbjct: 1 MLAHAARLPGLSGLPPRHAFSTLSRVSLSPLAMIGGRCQGRRQDGVGNHQQRQVGSPRRAFSSQHHSTQSLTCPLHPVHWKGHNYKPLLVKKRGVDIVQDPLYNKGTGFQHGERDRLNIRGLLPPRYLDFKTQIDRVMSNLRNQGDDMRKHIYLTELHDRNETLFHRVIVDNIEELAPIIYTPTVGRACVEFGQHFRRPRGMYFSTMDRGHFASMMYNWPQREVHVIVVTDGSRILGLGDLGANGAGIPIGKLALYCAAGKEK 263
BLAST of EWM23085.1 vs. NCBI_GenBank
Match: gi|589908240|dbj|BAO52744.1| (NAD-dependent malic enzyme [Thalassiosira pseudonana]) HSP 1 Score: 259.61 bits (662), Expect = 1.283e-79 Identity = 117/174 (67.24%), Postives = 143/174 (82.18%), Query Frame = 0
Query: 87 PLLVKKRGVDIVQDPLYNKGTGFQHGERDRLNIRGLLPPRYLDFKTQIDRVMSNLRNQGDDMRKHIYLTELHDRNETLFHRVIVDNIEELAPIIYTPTVGRACVEFGQHFRRPRGMYFSTMDRGHFASMMYNWPQREVHVIVVTDGSRILGLGDLGANGAGIPIGKLALYCAAG 260
P+ V RG +I+ +PL+NK T F+ GERDRL RGLLPPR L+ K Q R++ +R + +RK++ L E+HDRNETL+HR++VD+IEE+APIIYTPTVG+AC EFG FRRPRGMYF DRGH A+M+YNWPQ++VHVIVVTDGSRILGLGDLGANG GIPIGKL+LYCAAG
Sbjct: 10 PISVNSRGSEILNNPLFNKSTAFKGGERDRLRFRGLLPPRRLNMKVQKQRILEEIRAEDSMIRKNMILEEVHDRNETLYHRILVDHIEEMAPIIYTPTVGQACKEFGMRFRRPRGMYFCEEDRGHMAAMVYNWPQKDVHVIVVTDGSRILGLGDLGANGMGIPIGKLSLYCAAG 183
BLAST of EWM23085.1 vs. NCBI_GenBank
Match: gi|1210516779|dbj|GAX24268.1| (malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [Fistulifera solaris]) HSP 1 Score: 259.225 bits (661), Expect = 3.691e-79 Identity = 121/185 (65.41%), Postives = 145/185 (78.38%), Query Frame = 0
Query: 79 HWKGHN---YKPLLVKKRGVDIVQDPLYNKGTGFQHGERDRLNIRGLLPPRYLDFKTQIDRVMSNLRNQGDDMRKHIYLTELHDRNETLFHRVIVDNIEELAPIIYTPTVGRACVEFGQHFRRPRGMYFSTMDRGHFASMMYNWPQREVHVIVVTDGSRILGLGDLGANGAGIPIGKLALYCAAG 260
W G PL V RG DI+ +PLYNKGT F+ GERDRL RGLLP R ++ +Q R + LR + ++K+I L +LHDRNETL+HRV+VD+IEE+AP+IYTPTVG+AC+EFG FRRPRGMYFS DRGH A+M+YNWP ++VHVIVVTDGSRILGLGDLGANG GIPIGKL+LYCAAG
Sbjct: 38 EWAGCKRSFMAPLRVAARGADILYNPLYNKGTAFKSGERDRLGFRGLLPSRAMNIHSQKARFLLALRAETSAIKKNIMLEDLHDRNETLYHRVLVDHIEEMAPLIYTPTVGQACLEFGARFRRPRGMYFSEEDRGHMAAMVYNWPHKDVHVIVVTDGSRILGLGDLGANGMGIPIGKLSLYCAAG 222
BLAST of EWM23085.1 vs. NCBI_GenBank
Match: gi|669158198|ref|XP_008614661.1| (hypothetical protein SDRG_10450 [Saprolegnia diclina VS20] >gi|530733691|gb|EQC31933.1| hypothetical protein SDRG_10450 [Saprolegnia diclina VS20]) HSP 1 Score: 258.455 bits (659), Expect = 6.610e-79 Identity = 116/174 (66.67%), Postives = 142/174 (81.61%), Query Frame = 0
Query: 87 PLLVKKRGVDIVQDPLYNKGTGFQHGERDRLNIRGLLPPRYLDFKTQIDRVMSNLRNQGDDMRKHIYLTELHDRNETLFHRVIVDNIEELAPIIYTPTVGRACVEFGQHFRRPRGMYFSTMDRGHFASMMYNWPQREVHVIVVTDGSRILGLGDLGANGAGIPIGKLALYCAAG 260
P+ KRG+DIV DPLYNKGTGF+ ERDRL +RGL+PPR L+ KTQ++++ + + D +RK I+L+EL +RNETLF R+++DNIEE+AP++YTPTVG+ C +FG FRRPRGMYFS+ DR FASMMYNWP +V VIVVTDGSRILGLGDLG NG GIPIGKLALY AAG
Sbjct: 46 PVRAGKRGIDIVHDPLYNKGTGFKAVERDRLGLRGLVPPRRLNMKTQLEKLYDLFQQEPDPLRKSIFLSELQNRNETLFFRLLIDNIEEMAPVVYTPTVGQVCQKFGSMFRRPRGMYFSSADRSQFASMMYNWPSDDVEVIVVTDGSRILGLGDLGVNGMGIPIGKLALYTAAG 219
BLAST of EWM23085.1 vs. NCBI_GenBank
Match: gi|813177892|ref|XP_012205415.1| (hypothetical protein SPRG_20891 [Saprolegnia parasitica CBS 223.65] >gi|641529770|gb|KDO23927.1| hypothetical protein SPRG_20891 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 255.373 bits (651), Expect = 1.249e-78 Identity = 116/174 (66.67%), Postives = 141/174 (81.03%), Query Frame = 0
Query: 87 PLLVKKRGVDIVQDPLYNKGTGFQHGERDRLNIRGLLPPRYLDFKTQIDRVMSNLRNQGDDMRKHIYLTELHDRNETLFHRVIVDNIEELAPIIYTPTVGRACVEFGQHFRRPRGMYFSTMDRGHFASMMYNWPQREVHVIVVTDGSRILGLGDLGANGAGIPIGKLALYCAAG 260
P+ KRG+DIV DPLYNKGTGF+ ERDRL +RGL+PPR L KTQ++++ + + D +RK I+L+EL +RNETLF R+++DNIEE+AP++YTPTVG+ C +FG FRRPRGMYFS+ DR FASMMYNWP +V VIVVTDGSRILGLGDLG NG GIPIGKLALY AAG
Sbjct: 46 PVRAGKRGIDIVHDPLYNKGTGFKAVERDRLGLRGLVPPRRLVMKTQLEKLYDLFQQEPDPLRKSIFLSELQNRNETLFFRLLIDNIEEMAPVVYTPTVGQVCQKFGSMFRRPRGMYFSSADRSQFASMMYNWPCDDVEVIVVTDGSRILGLGDLGVNGMGIPIGKLALYTAAG 219
BLAST of EWM23085.1 vs. NCBI_GenBank
Match: gi|219112277|ref|XP_002177890.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217410775|gb|EEC50704.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 257.684 bits (657), Expect = 3.412e-78 Identity = 134/254 (52.76%), Postives = 167/254 (65.75%), Query Frame = 0
Query: 20 FSTLSRVSLSPLAMIGGRCQGRRQDG-VGNHQQRQVGSPRRAFSSQHHSTQSLTC--------PLHPV-HWKGHNYK---PLLVKKRGVDIVQDPLYNKGTGFQHGERDRLNIRGLLPPRYLDFKTQIDRVMSNLRNQGDDMRKHIYLTELHDRNETLFHRVIVDNIEELAPIIYTPTVGRACVEFGQHFRRPRGMYFSTMDRGHFASMMYNWPQREVHVIVVTDGSRILGLGDLGANGAGIPIGKLALYCAAG 260
S+ R SL L + R R+ + + V AFSSQ + LT P+H W G P+ + RG DI+ DPLYNKGT F+ GERDRL RG+LP R ++ Q +R + LR + ++RK++ L +LHDRNETL+HRV+VD+IEE+AP IYTPTVG+AC+EF +RRPRGMYF+ DRGH A+M+YNWP R+VHVI VTDGSRILGLGDLGANG GIPIGKLALYCAAG
Sbjct: 2 ISSACRGSLKSLCSVQLRSNTRQHASLISCNNSPNVKRFSTAFSSQTDG-EVLTVGGALSGEEPIHETGEWAGCKRSFMIPIRISVRGTDILLDPLYNKGTAFKTGERDRLRFRGMLPHRIMNIHLQKERFLQALRAEDSNIRKNVMLEDLHDRNETLYHRVLVDHIEEMAPYIYTPTVGQACMEFATRYRRPRGMYFTEEDRGHMAAMVYNWPHRDVHVICVTDGSRILGLGDLGANGMGIPIGKLALYCAAG 254
BLAST of EWM23085.1 vs. NCBI_GenBank
Match: gi|813211780|ref|XP_012210381.1| (hypothetical protein SPRG_15810 [Saprolegnia parasitica CBS 223.65] >gi|641524289|gb|KDO18911.1| hypothetical protein SPRG_15810 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 255.373 bits (651), Expect = 8.857e-78 Identity = 116/174 (66.67%), Postives = 141/174 (81.03%), Query Frame = 0
Query: 87 PLLVKKRGVDIVQDPLYNKGTGFQHGERDRLNIRGLLPPRYLDFKTQIDRVMSNLRNQGDDMRKHIYLTELHDRNETLFHRVIVDNIEELAPIIYTPTVGRACVEFGQHFRRPRGMYFSTMDRGHFASMMYNWPQREVHVIVVTDGSRILGLGDLGANGAGIPIGKLALYCAAG 260
P+ KRG+DIV DPLYNKGTGF+ ERDRL +RGL+PPR L KTQ++++ + + D +RK I+L+EL +RNETLF R+++DNIEE+AP++YTPTVG+ C +FG FRRPRGMYFS+ DR FASMMYNWP +V VIVVTDGSRILGLGDLG NG GIPIGKLALY AAG
Sbjct: 46 PVRAGKRGIDIVHDPLYNKGTGFKAVERDRLGLRGLVPPRRLVMKTQLEKLYDLFQQEPDPLRKSIFLSELQNRNETLFFRLLIDNIEEMAPVVYTPTVGQVCQKFGSMFRRPRGMYFSSADRSQFASMMYNWPCDDVEVIVVTDGSRILGLGDLGVNGMGIPIGKLALYTAAG 219
BLAST of EWM23085.1 vs. NCBI_GenBank
Match: gi|1210512510|dbj|GAX28367.1| (malate dehydrogenase [Fistulifera solaris]) HSP 1 Score: 261.922 bits (668), Expect = 6.592e-77 Identity = 121/185 (65.41%), Postives = 145/185 (78.38%), Query Frame = 0
Query: 79 HWKGHN---YKPLLVKKRGVDIVQDPLYNKGTGFQHGERDRLNIRGLLPPRYLDFKTQIDRVMSNLRNQGDDMRKHIYLTELHDRNETLFHRVIVDNIEELAPIIYTPTVGRACVEFGQHFRRPRGMYFSTMDRGHFASMMYNWPQREVHVIVVTDGSRILGLGDLGANGAGIPIGKLALYCAAG 260
W G PL V RG DI+ +PLYNKGT F+ GERDRL RGLLP R ++ +Q R + LR + ++K+I L +LHDRNETL+HRV+VD+IEE+AP+IYTPTVG+AC+EFG FRRPRGMYFS DRGH A+M+YNWP ++VHVIVVTDGSRILGLGDLGANG GIPIGKL+LYCAAG
Sbjct: 78 EWAGCKRSFMAPLRVAARGADILYNPLYNKGTAFKSGERDRLGFRGLLPSRAMNIHSQKARFLLALRAETSAIKKNIMLEDLHDRNETLYHRVLVDHIEEMAPLIYTPTVGQACLEFGARFRRPRGMYFSEEDRGHMAAMVYNWPHKDVHVIVVTDGSRILGLGDLGANGMGIPIGKLSLYCAAG 262
BLAST of EWM23085.1 vs. NCBI_GenBank
Match: gi|1173953286|gb|OQS00837.1| (NAD-dependent malic enzyme [Achlya hypogyna]) HSP 1 Score: 253.062 bits (645), Expect = 7.321e-77 Identity = 116/174 (66.67%), Postives = 139/174 (79.89%), Query Frame = 0
Query: 87 PLLVKKRGVDIVQDPLYNKGTGFQHGERDRLNIRGLLPPRYLDFKTQIDRVMSNLRNQGDDMRKHIYLTELHDRNETLFHRVIVDNIEELAPIIYTPTVGRACVEFGQHFRRPRGMYFSTMDRGHFASMMYNWPQREVHVIVVTDGSRILGLGDLGANGAGIPIGKLALYCAAG 260
P+ KRG+DIV DPLYNKGTGF+ ERDRL +RGL+PPR L+ KTQ+ ++ + D +RK I+L+EL +RNETLF R+++DNIEE+AP++YTPTVG C +FG FRRPRGMYFS+ DR FASMMYNWP +V VIVVTDGSRILGLGDLG NG GIPIGKLALY AAG
Sbjct: 45 PVRSGKRGIDIVHDPLYNKGTGFKASERDRLGLRGLVPPRRLNMKTQLAKLYDLFHEEPDPLRKSIFLSELQNRNETLFFRLLIDNIEEMAPVVYTPTVGLVCQKFGSMFRRPRGMYFSSDDRSQFASMMYNWPCDDVEVIVVTDGSRILGLGDLGVNGMGIPIGKLALYTAAG 218
BLAST of EWM23085.1 vs. NCBI_GenBank
Match: gi|224001756|ref|XP_002290550.1| (NAD dependent malic enzyme [Thalassiosira pseudonana CCMP1335] >gi|220973972|gb|EED92302.1| NAD dependent malic enzyme [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 251.906 bits (642), Expect = 9.602e-77 Identity = 113/166 (68.07%), Postives = 138/166 (83.13%), Query Frame = 0
Query: 95 VDIVQDPLYNKGTGFQHGERDRLNIRGLLPPRYLDFKTQIDRVMSNLRNQGDDMRKHIYLTELHDRNETLFHRVIVDNIEELAPIIYTPTVGRACVEFGQHFRRPRGMYFSTMDRGHFASMMYNWPQREVHVIVVTDGSRILGLGDLGANGAGIPIGKLALYCAAG 260
+I+ +PL+NK T F+ GERDRL RGLLPPR L+ K Q R++ +R + +RK++ L E+HDRNETL+HR++VD+IEE+APIIYTPTVG+AC EFG FRRPRGMYF DRGH A+M+YNWPQ++VHVIVVTDGSRILGLGDLGANG GIPIGKL+LYCAAG
Sbjct: 10 TEILNNPLFNKSTAFKGGERDRLRFRGLLPPRRLNMKVQKQRILEEIRAEDSMIRKNMILEEVHDRNETLYHRILVDHIEEMAPIIYTPTVGQACKEFGMRFRRPRGMYFCEEDRGHMAAMVYNWPQKDVHVIVVTDGSRILGLGDLGANGMGIPIGKLSLYCAAG 175 The following BLAST results are available for this feature:
BLAST of EWM23085.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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