EWM23088.1, cds7586 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23088.1 vs. NCBI_GenBank
Match: gi|585103943|gb|EWM23088.1| (rho gtpase [Nannochloropsis gaditana]) HSP 1 Score: 446.432 bits (1147), Expect = 8.594e-159 Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0
Query: 1 MSLMPALLSHTKGFLRRSYVSNLCLDSGSCVLWESHLYPRHLPPQPSKQSKHPTQAHSWHQGGRSSNCWSNGTFHPEGNDGFLVMQNIKCVVVGDGAVGKTCLLISYTTNSFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLLCYAVSSPSSFENIKNKWYPEIKHHAPGVPFILVGTKTDLRKDPECWPQS 213
MSLMPALLSHTKGFLRRSYVSNLCLDSGSCVLWESHLYPRHLPPQPSKQSKHPTQAHSWHQGGRSSNCWSNGTFHPEGNDGFLVMQNIKCVVVGDGAVGKTCLLISYTTNSFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLLCYAVSSPSSFENIKNKWYPEIKHHAPGVPFILVGTKTDLRKDPECWPQS
Sbjct: 1 MSLMPALLSHTKGFLRRSYVSNLCLDSGSCVLWESHLYPRHLPPQPSKQSKHPTQAHSWHQGGRSSNCWSNGTFHPEGNDGFLVMQNIKCVVVGDGAVGKTCLLISYTTNSFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLLCYAVSSPSSFENIKNKWYPEIKHHAPGVPFILVGTKTDLRKDPECWPQS 213
BLAST of EWM23088.1 vs. NCBI_GenBank
Match: gi|676385771|ref|XP_009036164.1| (hypothetical protein AURANDRAFT_70159 [Aureococcus anophagefferens] >gi|323453165|gb|EGB09037.1| hypothetical protein AURANDRAFT_70159 [Aureococcus anophagefferens]) HSP 1 Score: 244.973 bits (624), Expect = 1.688e-79 Identity = 111/124 (89.52%), Postives = 120/124 (96.77%), Query Frame = 0
Query: 85 MQNIKCVVVGDGAVGKTCLLISYTTNSFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLLCYAVSSPSSFENIKNKWYPEIKHHAPGVPFILVGTKTDLRKDPE 208
MQNIKCVVVGDGAVGKTCLLISYTTN+FPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLLC+++++P+SFENI+ KWYPEI HHAPGVPFILVGTK DLR DP+
Sbjct: 1 MQNIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLLCFSITNPNSFENIRTKWYPEINHHAPGVPFILVGTKLDLRNDPD 124
BLAST of EWM23088.1 vs. NCBI_GenBank
Match: gi|669168903|ref|XP_008619800.1| (Ras-like protein Rac1 [Saprolegnia diclina VS20] >gi|813157847|ref|XP_012202272.1| Ras-like protein Rac1 [Saprolegnia parasitica CBS 223.65] >gi|813224848|ref|XP_012211779.1| Ras-like protein Rac1 [Saprolegnia parasitica CBS 223.65] >gi|530728515|gb|EQC26757.1| Ras-like protein Rac1 [Saprolegnia diclina VS20] >gi|641522213|gb|KDO17513.1| Ras-like protein Rac1 [Saprolegnia parasitica CBS 223.65] >gi|641532875|gb|KDO26882.1| Ras-like protein Rac1 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 239.965 bits (611), Expect = 1.968e-77 Identity = 107/124 (86.29%), Postives = 119/124 (95.97%), Query Frame = 0
Query: 85 MQNIKCVVVGDGAVGKTCLLISYTTNSFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLLCYAVSSPSSFENIKNKWYPEIKHHAPGVPFILVGTKTDLRKDPE 208
MQN+KCVVVGDGAVGKTC+LISYTTN+FPGEYIPTVFDNYSANVMVD KP+NLGLWDTAGQEDYDRLRPLSYPQTDVFL+C++V SP+SFEN+K KWYPEI+HHAPGVPFILVGTK DLR+D +
Sbjct: 3 MQNMKCVVVGDGAVGKTCVLISYTTNAFPGEYIPTVFDNYSANVMVDAKPVNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSVVSPASFENVKAKWYPEIQHHAPGVPFILVGTKLDLREDED 126
BLAST of EWM23088.1 vs. NCBI_GenBank
Match: gi|1173956417|gb|OQS03199.1| (hypothetical protein THRCLA_04501 [Thraustotheca clavata]) HSP 1 Score: 238.424 bits (607), Expect = 5.492e-77 Identity = 107/124 (86.29%), Postives = 118/124 (95.16%), Query Frame = 0
Query: 85 MQNIKCVVVGDGAVGKTCLLISYTTNSFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLLCYAVSSPSSFENIKNKWYPEIKHHAPGVPFILVGTKTDLRKDPE 208
M N+KCVVVGDGAVGKTC+LISYTTN+FPGEYIPTVFDNYSANVMVD KPINLGLWDTAGQEDYDRLRPLSYPQTDVFL+C++V SP+SFEN+K KW+PEI+HHAPGVPFILVGTK DLR+D E
Sbjct: 1 MHNMKCVVVGDGAVGKTCVLISYTTNAFPGEYIPTVFDNYSANVMVDAKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSVVSPASFENVKAKWFPEIQHHAPGVPFILVGTKLDLREDEE 124
BLAST of EWM23088.1 vs. NCBI_GenBank
Match: gi|1021065454|emb|SAL98525.1| (hypothetical protein, partial, partial [Absidia glauca]) HSP 1 Score: 237.654 bits (605), Expect = 7.310e-77 Identity = 107/124 (86.29%), Postives = 117/124 (94.35%), Query Frame = 0
Query: 85 MQNIKCVVVGDGAVGKTCLLISYTTNSFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLLCYAVSSPSSFENIKNKWYPEIKHHAPGVPFILVGTKTDLRKDPE 208
MQ+IKCVVVGDGAVGKTCLLISYTTN+FPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFL+C+++ SP SFEN++ KWYPEI HHAP +P ILVGTK DLR+DPE
Sbjct: 1 MQSIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFSLVSPPSFENVRTKWYPEISHHAPNIPMILVGTKLDLREDPE 124
BLAST of EWM23088.1 vs. NCBI_GenBank
Match: gi|1021065882|emb|SAL97984.1| (hypothetical protein [Absidia glauca]) HSP 1 Score: 238.039 bits (606), Expect = 7.969e-77 Identity = 107/124 (86.29%), Postives = 117/124 (94.35%), Query Frame = 0
Query: 85 MQNIKCVVVGDGAVGKTCLLISYTTNSFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLLCYAVSSPSSFENIKNKWYPEIKHHAPGVPFILVGTKTDLRKDPE 208
MQ+IKCVVVGDGAVGKTCLLISYTTN+FPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFL+C+++ SP SFEN++ KWYPEI HHAP +P ILVGTK DLR+DPE
Sbjct: 1 MQSIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFSLVSPPSFENVRTKWYPEISHHAPNIPMILVGTKLDLREDPE 124
BLAST of EWM23088.1 vs. NCBI_GenBank
Match: gi|1183321771|gb|ORX51573.1| (hypothetical protein DM01DRAFT_1337088 [Hesseltinella vesiculosa]) HSP 1 Score: 237.654 bits (605), Expect = 1.094e-76 Identity = 108/124 (87.10%), Postives = 116/124 (93.55%), Query Frame = 0
Query: 85 MQNIKCVVVGDGAVGKTCLLISYTTNSFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLLCYAVSSPSSFENIKNKWYPEIKHHAPGVPFILVGTKTDLRKDPE 208
MQ+IKCVVVGDGAVGKTCLLISYTTN+FPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFL+C+++ SP SFEN+K KWYPEI HHAP P ILVGTK DLR+DPE
Sbjct: 1 MQSIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPPSFENVKTKWYPEISHHAPNTPIILVGTKLDLREDPE 124
BLAST of EWM23088.1 vs. NCBI_GenBank
Match: gi|675181823|ref|XP_008899796.1| (hypothetical protein PPTG_07366 [Phytophthora parasitica INRA-310] >gi|566031756|gb|ETI54667.1| hypothetical protein F443_02555 [Phytophthora parasitica P1569] >gi|567969450|gb|ETK94537.1| hypothetical protein L915_02430 [Phytophthora parasitica] >gi|567997832|gb|ETL47911.1| hypothetical protein L916_02405 [Phytophthora parasitica] >gi|568027055|gb|ETM01023.1| hypothetical protein L917_02331 [Phytophthora parasitica] >gi|568057539|gb|ETM54201.1| hypothetical protein L914_02427 [Phytophthora parasitica] >gi|568100498|gb|ETN15197.1| hypothetical protein PPTG_07366 [Phytophthora parasitica INRA-310] >gi|570335478|gb|ETO83426.1| hypothetical protein F444_02550 [Phytophthora parasitica P1976] >gi|570959539|gb|ETP24518.1| hypothetical protein F441_02497 [Phytophthora parasitica CJ01A1] >gi|570995663|gb|ETP52464.1| hypothetical protein F442_02524 [Phytophthora parasitica P10297]) HSP 1 Score: 237.654 bits (605), Expect = 1.813e-76 Identity = 106/124 (85.48%), Postives = 118/124 (95.16%), Query Frame = 0
Query: 85 MQNIKCVVVGDGAVGKTCLLISYTTNSFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLLCYAVSSPSSFENIKNKWYPEIKHHAPGVPFILVGTKTDLRKDPE 208
MQN+KCVVVGDGAVGKTC+LISYTTN+FPGEYIPTVFDNYSANVMVD +PINLGLWDTAGQEDYDRLRPLSYPQTDVFL+C++V S +SFEN+K+KW PEI+HHAPGVPFILVGTK+DLR D E
Sbjct: 4 MQNMKCVVVGDGAVGKTCVLISYTTNTFPGEYIPTVFDNYSANVMVDNRPINLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSVVSRASFENVKSKWLPEIRHHAPGVPFILVGTKSDLRDDEE 127
BLAST of EWM23088.1 vs. NCBI_GenBank
Match: gi|1183324845|gb|ORX54619.1| (GTP binding protein Rac1 [Hesseltinella vesiculosa]) HSP 1 Score: 237.269 bits (604), Expect = 1.932e-76 Identity = 107/124 (86.29%), Postives = 117/124 (94.35%), Query Frame = 0
Query: 85 MQNIKCVVVGDGAVGKTCLLISYTTNSFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLLCYAVSSPSSFENIKNKWYPEIKHHAPGVPFILVGTKTDLRKDPE 208
MQ+IKCVVVGDGAVGKTCLLISYTTN+FPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFL+C+++ SP SFEN++ KWYPEI HHAP +P ILVGTK DLR+DPE
Sbjct: 1 MQSIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFSLVSPPSFENVRTKWYPEISHHAPNIPMILVGTKLDLREDPE 124
BLAST of EWM23088.1 vs. NCBI_GenBank
Match: gi|970642290|gb|KUF84008.1| (Ras-related protein Rac1 [Phytophthora nicotianae]) HSP 1 Score: 236.884 bits (603), Expect = 2.570e-76 Identity = 106/124 (85.48%), Postives = 118/124 (95.16%), Query Frame = 0
Query: 85 MQNIKCVVVGDGAVGKTCLLISYTTNSFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLLCYAVSSPSSFENIKNKWYPEIKHHAPGVPFILVGTKTDLRKDPE 208
MQN+KCVVVGDGAVGKTC+LISYTTN+FPGEYIPTVFDNYSANVMVD +PINLGLWDTAGQEDYDRLRPLSYPQTDVFL+C++V S +SFEN+K+KW PEI+HHAPGVPFILVGTK+DLR D E
Sbjct: 1 MQNMKCVVVGDGAVGKTCVLISYTTNTFPGEYIPTVFDNYSANVMVDNRPINLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSVVSRASFENVKSKWLPEIRHHAPGVPFILVGTKSDLRDDEE 124 The following BLAST results are available for this feature:
BLAST of EWM23088.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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