EWM23144.1, cds7501 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23144.1 vs. NCBI_GenBank
Match: gi|585104025|gb|EWM23144.1| (Checkpoint protein Rad24 [Nannochloropsis gaditana]) HSP 1 Score: 1785 bits (4622), Expect = 0.000e+0 Identity = 883/883 (100.00%), Postives = 883/883 (100.00%), Query Frame = 0
Query: 1 MVAADFIEISSSEASTSSSDEGEEAEREGADSALQPHGQKRRVRLRRPNLSKSIENIEVKKNDAMAQKSRKRSRQRPSLSSCSSSDEEKARSNRHAHDAGENTDTCAEECIKSSVRRSNFSLCGKDSGNDMEGEDEEQEEQEEVDEQAGYEKMEPGGKGTRQTVRQGRKRISVSIRSASKRSQSHAKSPAGVSDAGSLDEEVGPPRRRSRTAMTGAPPASSSPAADSTSLFPSSTKKVPKMEAHARPSGSHVNALRLVFGKTPRPAPDKAFSTQAPSRPPRHNKEESTRGKSGALGAGSLWTEKHRPRKAADLSIPPKKVREVQQWLEGALGLVCEESGLRPGAHKGGGQKLLVVRGPAGVGKSAMVQVLAEALELPVLRWTEETPWESREDAKRKKWEGDEMAMGGGGRQYVSQAEGFRAFVRGAAYGPLEMAPSAKAGLDRSRDAGDPNACGDWADPGAEGRRQGPKGERKGEDVRRALLVMEEVPYHATGRAAAHFQAALASFLAASVHPAVVIFTEEHEDRAGSGALERLLTRPLLHAKGVRQIHINPATDANMRRILTHIASAEGLGPSRSEVEAIVACSRGDLRHAILTLQLQLQGSRAAPNAPPRALARSDASASSSHLLRQCTGGRKGEGGRGGEDKGGEGRGGRRVGRRREGEEAERKDTYMSSFHALGKVLHAKRLPESDESRKGEGDPRGRLSFVPEEVLKRCEMEAEGLSAFVQTHALALFGDVEELAEAMAFFADADVLLARVYSTAFHRDRTDATFPEEYVLSILGRTVAHSNRHPAGGQGTGFRGMTAPRYFEVLRQRRETGRRLGLLCQDYVGKVARAGRASSIRMTVGEMVDEMVPFAKQIGMPQDVREGIGVSMYEGWGEGKLED 883
MVAADFIEISSSEASTSSSDEGEEAEREGADSALQPHGQKRRVRLRRPNLSKSIENIEVKKNDAMAQKSRKRSRQRPSLSSCSSSDEEKARSNRHAHDAGENTDTCAEECIKSSVRRSNFSLCGKDSGNDMEGEDEEQEEQEEVDEQAGYEKMEPGGKGTRQTVRQGRKRISVSIRSASKRSQSHAKSPAGVSDAGSLDEEVGPPRRRSRTAMTGAPPASSSPAADSTSLFPSSTKKVPKMEAHARPSGSHVNALRLVFGKTPRPAPDKAFSTQAPSRPPRHNKEESTRGKSGALGAGSLWTEKHRPRKAADLSIPPKKVREVQQWLEGALGLVCEESGLRPGAHKGGGQKLLVVRGPAGVGKSAMVQVLAEALELPVLRWTEETPWESREDAKRKKWEGDEMAMGGGGRQYVSQAEGFRAFVRGAAYGPLEMAPSAKAGLDRSRDAGDPNACGDWADPGAEGRRQGPKGERKGEDVRRALLVMEEVPYHATGRAAAHFQAALASFLAASVHPAVVIFTEEHEDRAGSGALERLLTRPLLHAKGVRQIHINPATDANMRRILTHIASAEGLGPSRSEVEAIVACSRGDLRHAILTLQLQLQGSRAAPNAPPRALARSDASASSSHLLRQCTGGRKGEGGRGGEDKGGEGRGGRRVGRRREGEEAERKDTYMSSFHALGKVLHAKRLPESDESRKGEGDPRGRLSFVPEEVLKRCEMEAEGLSAFVQTHALALFGDVEELAEAMAFFADADVLLARVYSTAFHRDRTDATFPEEYVLSILGRTVAHSNRHPAGGQGTGFRGMTAPRYFEVLRQRRETGRRLGLLCQDYVGKVARAGRASSIRMTVGEMVDEMVPFAKQIGMPQDVREGIGVSMYEGWGEGKLED
Sbjct: 1 MVAADFIEISSSEASTSSSDEGEEAEREGADSALQPHGQKRRVRLRRPNLSKSIENIEVKKNDAMAQKSRKRSRQRPSLSSCSSSDEEKARSNRHAHDAGENTDTCAEECIKSSVRRSNFSLCGKDSGNDMEGEDEEQEEQEEVDEQAGYEKMEPGGKGTRQTVRQGRKRISVSIRSASKRSQSHAKSPAGVSDAGSLDEEVGPPRRRSRTAMTGAPPASSSPAADSTSLFPSSTKKVPKMEAHARPSGSHVNALRLVFGKTPRPAPDKAFSTQAPSRPPRHNKEESTRGKSGALGAGSLWTEKHRPRKAADLSIPPKKVREVQQWLEGALGLVCEESGLRPGAHKGGGQKLLVVRGPAGVGKSAMVQVLAEALELPVLRWTEETPWESREDAKRKKWEGDEMAMGGGGRQYVSQAEGFRAFVRGAAYGPLEMAPSAKAGLDRSRDAGDPNACGDWADPGAEGRRQGPKGERKGEDVRRALLVMEEVPYHATGRAAAHFQAALASFLAASVHPAVVIFTEEHEDRAGSGALERLLTRPLLHAKGVRQIHINPATDANMRRILTHIASAEGLGPSRSEVEAIVACSRGDLRHAILTLQLQLQGSRAAPNAPPRALARSDASASSSHLLRQCTGGRKGEGGRGGEDKGGEGRGGRRVGRRREGEEAERKDTYMSSFHALGKVLHAKRLPESDESRKGEGDPRGRLSFVPEEVLKRCEMEAEGLSAFVQTHALALFGDVEELAEAMAFFADADVLLARVYSTAFHRDRTDATFPEEYVLSILGRTVAHSNRHPAGGQGTGFRGMTAPRYFEVLRQRRETGRRLGLLCQDYVGKVARAGRASSIRMTVGEMVDEMVPFAKQIGMPQDVREGIGVSMYEGWGEGKLED 883
BLAST of EWM23144.1 vs. NCBI_GenBank
Match: gi|224002336|ref|XP_002290840.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220974262|gb|EED92592.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 206.453 bits (524), Expect = 1.318e-51 Identity = 172/622 (27.65%), Postives = 273/622 (43.89%), Query Frame = 0
Query: 286 ESTRGKSGALGAGSLWTEKHRPRKAADLSIPPKKVREVQQWLEGALGLVCEESGLRP----------------------------GAHKGGGQKLLVVRGPAGVGKSAMVQVLAEALELPVLRWTEETPWESREDAKRKKWEGDEMAMGGGGRQ--YVSQAEGFRAFVRGAAYGPLEMAPSAKAGLDRSRDAGDPNACGDWADPGAEGRRQGPKGERKGEDVRRALLVMEEVPYHATGRAAAHFQAALASFLAASVHPAVVIFTEEHEDRAGSGALERLLTRPLLHAKGVRQIHINPATDANMRRILTHIASAEGLGPSRSEV-EAIVACSRGDLRHAILTLQLQLQGSRAAPNAPPRALARSDASASSSHLLRQCTGGRKGEGGRGGEDKGGEGRGGRRVGRRREGEEAERKDTYMSSFHALGKVLHAKRLPESD------ESRKGEG---DPRGRLSFVPEEVLKRCEMEAEGLSAFVQTHALALFGDVEELAEAMAFFADADVLLARVYSTAFHRDRTDATFPEEYVLSILGRTVAHSNRHPAGGQGTGFRGMTAPRYFEVLRQRRETGRRLGLLCQDYVG--KVARAGRASSIRMTVG---EMVDEMVPFAKQIGMPQ 862
+ST + A G+ +W +KH PR +L I PKK+ EV+ WL + +S +P G + K++++ G G+GKSAMV+VLA + L +L W ++ A ++ G G Y SQ F F+ G L M AGLD ++ R E+ GE +++++EE+P +A F+ + + + P V +F++ +E + LERL+ +L++ V+ + I T A M++ L IA EGLG +E+ E + S GDLRHAIL LQ + GS G GGR + +A ++D +S+FHALGK+L+AKR P S E R G D RG L FVPE+VL++ +M +F+ H+ F D+ +L++A +DA + R+ +TD FP +Y S+ GR +A +N++PA Q FR ++AP+ FEV+ ++RE ++ L + G K+A I T+G + V +PF + + +PQ
Sbjct: 336 QSTAADAAAKGSSEMWIDKHAPRTTKELCIAPKKIDEVKSWLVSHIN--SRQSKRKPHSNSNNNNNNNNNNKAMSMHTTPYDNPLGDNPPPDTKMMILIGSPGIGKSAMVKVLAREMNLEILMWNDDHVDYVDNSASF------QIGCDGAGEYLPYQSQLASFEEFLNT---GGLGMDSLEVAGLDSGGGG---------GGKSSKSGRTSLTSEKDGE-YEGSVILIEEIPNIYNAESAQAFRNIMERHIRRTNVPTVFVFSDVYEGKHKPEDLERLIPSSMLYSLLVQTLQIQAVTKAKMKKSLEAIAKEEGLGRLPTELMEELHLSSGGDLRHAILALQFRF-GS-------------------------------------------GSSTGGRARAVDLDSTKASKRDVKLSTFHALGKLLYAKRKPRSQDPYSTTEKRTGISAWDDGRGPLDFVPEQVLEKTDMATSSAISFIAYHSPDFFTDIAQLSDAFDSISDAGEFMDRL-------GQTDGPFPMDYASSLGGRAIADANKNPAPSQ---FRHLSAPKVFEVMNKKRENETKMKQLRKRLSGSEKIA-------INDTIGSAHQFVTNSLPFMRNV-IPQ 874
BLAST of EWM23144.1 vs. NCBI_GenBank
Match: gi|1072230845|gb|OEU15578.1| (P-loop containing nucleoside triphosphate hydrolase protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 172.555 bits (436), Expect = 2.029e-42 Identity = 152/568 (26.76%), Postives = 246/568 (43.31%), Query Frame = 0
Query: 300 LWTEKHRPRKAADLSIPPKKVREVQQWLEGALGLVCEESGLRPGAHKGGGQKLLVVRGPAGVGKSAMVQVLAEALELPVLRWTEETPWESREDAKRKKWEGDEMAMGGGGRQYVSQAEGFRAFVR--GAAYGPLEMAPSAKAGLDRSRDAGDPNACGDWADPGAEGRRQGPKGERKGEDVRRALLVMEEVPYHATGRAAAHFQAALASFLAASVHPAVVIFTEEHEDRAGSGALERLLTRPLLHAKGVRQI-HINPATDANMRRILTHIASAEGLGPSRSEVEAIVACSRGDLRHAILTLQLQLQGSRAAPNAPPRALARSDASASSSHLLRQCTGGRKGEGGRGGEDKGGEGRGGRRVGRRREGEEAERKDTYMSSFHALGKVLHAKRLPESDESRKGEGDPRGRLSFVPEEVLKRCEMEAEGLSAFVQTHALALFGDVEELAEAMAFFADADVLLARVYSTAFHRDRTDATFPEEYVLSILGRTVAHSNRHPAGGQGTGFRGMTAPRYFEVLRQRRETGRRLGLLCQDYVGKVARAGRASSIRMTVGEMVDEMVPFAKQIGMPQDV 864
+W EK P+ ++DL + PKKV+E+ W++G C++ + G GVGKS ++++A+ L LP++ W E R + EG + Q S + F F++ GA +G L++ S+ +++++E++P A F+ L++ L S P V+IF++ E + LERL+ L+ I INP T M++IL+ IA E + +E I S GD+RHA++TLQL G ++SD + + T KG+ R DT +S+FH+LGK+L+AKR S G RL+F PE +L+R ++ +G F++ H+ F D+ EL+ A F+DA LL + + + F +Y SI GR VA++N HPA + FR + P+ F+V+R ++ Q V +++R R S + V E +PF +QI +PQDV
Sbjct: 1 MWVEKFTPKSSSDLCVAPKKVKEIMSWIQG-----CKKKKQKLLILVGS----------PGVGKSTTIRLIAKELNLPIVSWNESY-------NPRGEQEGVDSRSLFSVEQ-TSALDSFNEFLQQSGAGFGSLQLMSSSPD-----------------------------NASNNSNSNSNSIILLEDLPNLHGKNAELRFRTYLSNHLQRSQLPTVLIFSDVSEGKHKPEDLERLIDPNDLYDNDRTTIMQINPVTKPKMKKILSTIAKREKYYFDSNFLEEIHHQSHGDIRHAVMTLQLHATGR-----------SKSDCATT--------TTLHKGQNNR---------------------------DTKLSAFHSLGKILYAKR-----ASINGVD---SRLTFDPEAILERSDLGVDGSLRFLEFHSPDFFTDITELSNAYGHFSDAAFLLGHDTVSGSRSNDNGSAF--KYASSIAGRAVANTNIHPAPNK---FRQFSRPKVFDVIRNGKQN--------QILVDQLSR--RLSKCHCPLSNFVTESLPFVRQI-VPQDV 446
BLAST of EWM23144.1 vs. NCBI_GenBank
Match: gi|1210529058|dbj|GAX12204.1| (cell cycle checkpoint protein [Fistulifera solaris]) HSP 1 Score: 165.236 bits (417), Expect = 1.129e-39 Identity = 148/584 (25.34%), Postives = 243/584 (41.61%), Query Frame = 0
Query: 299 SLWTEKHRPRKAADLSIPPKKVREVQQWLEGALGLVCEESGLRPGAHKGGGQKLLVVRGPAGVGKSAMVQVLAEALELPVLRWTEE-----TPWESREDAKRKKWEGDEMAMGGGGRQYVSQAEGFRAFVR--GAAYGPLEMAPSAKAGLDRSRDAGDPNACGDWADPGAEGRRQGPKGERKGEDVRRALLVMEEVPYHATGRAAAHFQAALASFLAASVHPAVVIFTEEHEDRAGSGALERLLTRPLLHAKGVRQIHINPATDAN-MRRILTHIASAEGLGPSRSEVEAIVACSRGDLRHAILTLQLQLQGSRAAPNAPPRALARSDASASSSHLLRQCTGGRKGEGGRGGEDKGGEGRGGRRVGRRREGEEAERKDTYMSSFHALGKVLHAKRLPESDESRKGEGDPRGRLSFVPEEVLKRCEMEAEGLSAFVQTHALALFGDVEELAEAMAFFADADVLLARVYSTA-FHRDRTDATFPEEYVLSILGRTVAHSNRHPAGGQGTGFRGMTAPRYFEVLRQRRETGRRL-----GLLCQDYVGKVARAGRASSIRMTVGEMVDEMVPFAKQIGMPQDVREGI 868
SLW++++ P DL + KKV+EV WL+ ++ KLL++ G G+GKS M+ +L + VL W E T SR D+ E Y S + F+ F+ G Y PL ++ GE D RR ++++++PY T A F+ L S P ++I ++ E + + L R L ++ V IH+NP T + + +++ +A+ G+ S E I GD R A+ TLQ + G + EG R + GG+ R D +++FHALGK+L+AKR +S R L F PE V+++ + E + AF++ H++ + D+ + +EA +DA + L++ + T + + FPE YV S+ GRTVA +N+HPA + FR +AP ++V R+RR+ +L LL Q + +A + S+ E+VPF ++I PQ + +
Sbjct: 41 SLWSDEYAPTSINDLCVASKKVKEVTAWLDQSIS------------------KLLILVGSPGIGKSTMIHLLLKERSWNVLEWNESFSSLYTNGSSRNDSTLSSIE------------YQSPVDSFQQFLEEAGTGYHPLSIS-----------------------------------GE---TDSRRTAILLDDLPYLHTAETQARFRRLFQQHLEQSRIPTILIMSDVTEGKC-QHLTDYLDNRFLYNSGLVTIIHVNPPTRSRFVSKVVQRVATLAGISISVDAAEDIYDRVEGDARAALATLQFEYVG--------------------------------RKEGQRTAKFHGGDMR-----------------DKKLNAFHALGKLLYAKR-----KSTSASLYERPPLEFDPERVVEQSDTELSNVLAFLEFHSVDFYTDISDFSEATHCLSDAALWLSQSHLTGNYTKHSPSHVFPEAYVTSLAGRTVAWTNQHPAVSR---FRQFSAPPIYQVARKRRDNQNQLSQWRDSLLNQGVIHDLANSTAWST----------EIVPFVRKI-FPQSMTSSL 487
BLAST of EWM23144.1 vs. NCBI_GenBank
Match: gi|765131538|ref|XP_011477992.1| (cell cycle checkpoint protein RAD17 [Oryzias latipes]) HSP 1 Score: 144.05 bits (362), Expect = 4.454e-32 Identity = 154/602 (25.58%), Postives = 239/602 (39.70%), Query Frame = 0
Query: 257 LVFGKTPRPAPDK----AFSTQAPSRPPRHNKEESTRGKSGALGAGSLWTEKHRPRKAADLSIPPKKVREVQQWLEGALGLVCEESGLRPGAHKGGGQKLLVVRGPAGVGKSAMVQVLAEALELPVLRWTEETPWESREDAKRKKWEGDEMAMGGGGRQYVSQAEGFRAF-VRGAAYGPLEMAPSAKAGLDRSRDAGDPNACGDWADPGAEGRRQGPKGERKGEDVRRALLVMEEVPYHATGRAAAHFQAALASFLAASVHPAVVIFTEEHEDRAGSGALERLLTRPLLHAKGVRQIHINPATDANMRRILTHIASAEGLG-------PSRSEVEAIVACSRGDLRHAILTLQLQLQGSRAAPNAPPRALARSDASASSSHLLRQCTGGRKGEGG--RGGEDKGGEG-RGGRRVGR------RREGEEAER----KDTYMSSFHALGKVLHAKR-----LPESDESRKGEGDPRGRLSFVPEEVLKRCEMEAEGLSAFVQTHALALFGDVEELAEAMAFFADADVLLARVYSTAFHRDRTDATFPEEYVLSILGRTVAHSNRHPAGGQGTGFRGMTAPRYFEVLRQRRETGRRLGLLCQDYV 828
++ KT P K AFS Q + ES +G G W +++ P+ A+L++ KKV +VQ W+ AH+ G +LV+ GP+G GK+A V+VL++ L L V WT + E + W D G Y SQ FR F +R YG L MA D GA G++ L+++E+ P + R + L F+ + P V + + E +G G++ L R + + I NP +M ++L I++ E + P ++E+EA+ + S GD+R AI +LQ C G G G R +D+ G RG R + + +E ER KD + F ALGK+LH KR +P R L PE V++R + AE + ++ + L F +VE++ A + +DAD+L A D T+ +Y S+ R + HSN H GFR + P + +V + RE L +D+
Sbjct: 34 FLWSKTDTKNPKKRKGGAFSCQ---------RLESDQG-----GQDESWVDRYSPQSQAELAVHKKKVEDVQTWM---------------NAHRSKG-GILVLTGPSGSGKTATVRVLSQELGLKVQEWTNPSNVEPYSSWQNADWRID-------GLTYSSQVTQFREFLLRAYKYGCLSMA----------------------GDGGAAGKK---------------LILVEDFP-NQFSRQPSSLHDLLRRFVRIARCPLVFVVS---ESVSGDGSVRSLFPREIQEELHINCISFNPVAPTSMMKVLGSISAQEAVKSGGRTSVPGQAELEALCSGSAGDIRSAINSLQF------------------------------LCLLGSSGNSGVSRTKKDRPASGRRGASRSNQKTKKTKTVKDQEEERAIGGKDAALFLFRALGKILHCKRGGHTEVPSPALPPHLLHHCREDLLVEPEVVVERSHVSAEMFNLYLHQNYLDFFSEVEDVERASEYLSDADLLAA---------DWTNRIILRDYSSSVAVRGILHSNSHQV---SVGFRPLHKPAWLQVSTKHRENCLAARHLFRDFC 515
BLAST of EWM23144.1 vs. NCBI_GenBank
Match: gi|1007788042|ref|XP_015830530.1| (PREDICTED: cell cycle checkpoint protein RAD17 isoform X2 [Nothobranchius furzeri]) HSP 1 Score: 142.895 bits (359), Expect = 6.733e-32 Identity = 139/534 (26.03%), Postives = 216/534 (40.45%), Query Frame = 0
Query: 298 GSLWTEKHRPRKAADLSIPPKKVREVQQWLEGALGLVCEESGLRPGAHKGGGQKLLVVRGPAGVGKSAMVQVLAEALELPVLRWTEETPWESREDAKRKKWEGDEMAMGGGGRQYVSQAEGFRAFV-RGAAYGPLEMAPSAKAGLDRSRDAGDPNACGDWADPGAEGRRQGPKGERKGEDVRRALLVMEEVPYHATGRAAAHFQAALASFLAASVHPAVVIFTEEHEDRAGSGALERLLTRPLLHAKGVRQIHINPATDANMRRILTHIASAEG-------LGPSRSEVEAIVACSRGDLRHAILTLQLQLQGSRAAPNAPPRALARSDASASSSHLLRQCTGGRKGEGGRGGEDKGGEGRGGRRVGRRREGEEAERKDTYMSSFHALGKVLHAKRLPESDESRKGEGDP-------RGRLSFVPEEVLKRCEMEAEGLSAFVQTHALALFGDVEELAEAMAFFADADVLLARVYSTAFHRDRTDATFPEEYVLSILGRTVAHSNRHPAGGQGTGFRGMTAPRYFEVLRQRRET 816
G W + + PR ADL++ KKV EV++W++ K G +L++ GP+G GK+A VQVL++ + + V WT + ES ++ W + G Y SQ F F+ R Y L+M D G N R L+++E+ P + R A A L F+ +S H ++V E ++G + L R L G+ I NP M+++L HI E P +++E + + S GD+R A+ +LQ P + L + R+C R E + K G RG E + KD + F ALGK+LH KR ++ G P R L PE V++R M E S ++ + L F D+E++ A + +DAD+L A D T + E Y S+ R + HS+ H +GFR + P +F V ++ R+
Sbjct: 67 GEAWVDTYSPRSQADLAVHRKKVEEVEKWIKT-----------HTNTSKAG---VLILTGPSGCGKTATVQVLSQEMGVQVQEWTNTSNLESYGSSQHADWSTN-------GFSYSSQLTQFEEFLLRANKYKCLKMI----------SDKGTTN---------------------------RKLILVEDFP-NQFYRHPASLHAVLRRFVNSS-HSSLVFVVSE--SQSGGSRSQALFPRELQEELGISCISFNPVAPTAMKKVLNHILLQETRKSCERVCVPDHAQLEVLCSGSSGDIRSAVNSLQFFC--------LPEKELFMAK---------RRCVAPR--ERVQRISMKAGPSRG-------EEDQAIGGKDASLFLFRALGKILHCKR---GNQDASVPGLPPHLLQHHRHTLLVTPELVVERSHMSGELFSLYLHQNYLDFFSDLEDVDRASQYLSDADLLTA---------DWTSRSLLEPYGSSVACRGLLHSHSHQV---SSGFRPLHKPSWFLVNKKYRDN 497
BLAST of EWM23144.1 vs. NCBI_GenBank
Match: gi|1007788040|ref|XP_015830529.1| (PREDICTED: cell cycle checkpoint protein RAD17 isoform X1 [Nothobranchius furzeri]) HSP 1 Score: 142.895 bits (359), Expect = 7.385e-32 Identity = 139/534 (26.03%), Postives = 216/534 (40.45%), Query Frame = 0
Query: 298 GSLWTEKHRPRKAADLSIPPKKVREVQQWLEGALGLVCEESGLRPGAHKGGGQKLLVVRGPAGVGKSAMVQVLAEALELPVLRWTEETPWESREDAKRKKWEGDEMAMGGGGRQYVSQAEGFRAFV-RGAAYGPLEMAPSAKAGLDRSRDAGDPNACGDWADPGAEGRRQGPKGERKGEDVRRALLVMEEVPYHATGRAAAHFQAALASFLAASVHPAVVIFTEEHEDRAGSGALERLLTRPLLHAKGVRQIHINPATDANMRRILTHIASAEG-------LGPSRSEVEAIVACSRGDLRHAILTLQLQLQGSRAAPNAPPRALARSDASASSSHLLRQCTGGRKGEGGRGGEDKGGEGRGGRRVGRRREGEEAERKDTYMSSFHALGKVLHAKRLPESDESRKGEGDP-------RGRLSFVPEEVLKRCEMEAEGLSAFVQTHALALFGDVEELAEAMAFFADADVLLARVYSTAFHRDRTDATFPEEYVLSILGRTVAHSNRHPAGGQGTGFRGMTAPRYFEVLRQRRET 816
G W + + PR ADL++ KKV EV++W++ K G +L++ GP+G GK+A VQVL++ + + V WT + ES ++ W + G Y SQ F F+ R Y L+M D G N R L+++E+ P + R A A L F+ +S H ++V E ++G + L R L G+ I NP M+++L HI E P +++E + + S GD+R A+ +LQ P + L + R+C R E + K G RG E + KD + F ALGK+LH KR ++ G P R L PE V++R M E S ++ + L F D+E++ A + +DAD+L A D T + E Y S+ R + HS+ H +GFR + P +F V ++ R+
Sbjct: 67 GEAWVDTYSPRSQADLAVHRKKVEEVEKWIKT-----------HTNTSKAG---VLILTGPSGCGKTATVQVLSQEMGVQVQEWTNTSNLESYGSSQHADWSTN-------GFSYSSQLTQFEEFLLRANKYKCLKMI----------SDKGTTN---------------------------RKLILVEDFP-NQFYRHPASLHAVLRRFVNSS-HSSLVFVVSE--SQSGGSRSQALFPRELQEELGISCISFNPVAPTAMKKVLNHILLQETRKSCERVCVPDHAQLEVLCSGSSGDIRSAVNSLQFFC--------LPEKELFMAK---------RRCVAPR--ERVQRISMKAGPSRG-------EEDQAIGGKDASLFLFRALGKILHCKR---GNQDASVPGLPPHLLQHHRHTLLVTPELVVERSHMSGELFSLYLHQNYLDFFSDLEDVDRASQYLSDADLLTA---------DWTSRSLLEPYGSSVACRGLLHSHSHQV---SSGFRPLHKPSWFLVNKKYRDN 497
BLAST of EWM23144.1 vs. NCBI_GenBank
Match: gi|1211247463|ref|XP_021477869.1| (cell cycle checkpoint protein RAD17 [Oncorhynchus mykiss]) HSP 1 Score: 141.354 bits (355), Expect = 5.498e-31 Identity = 163/644 (25.31%), Postives = 260/644 (40.37%), Query Frame = 0
Query: 245 ARPSGSHVNALRLVFGKTPRPAPDKAFSTQAPSRPPRHNKEESTRGKSGALGAGSLWTEKHRPRKAADLSIPPKKVREVQQWLEGALGLVCEESGLRPGAHKGGGQKLLVVRGPAGVGKSAMVQVLAEALELPVLRWTEETPWE--------SREDAKRKKWEGDEMAMGGGGRQYVSQAEGFRAFV-RGAAYGPLEMAPSAKAGLDRSRDAGDPNACGDWADPGAEGRRQGPKGERKGEDVRRALLVMEEVPYHATGRAAAHFQAALASFLAASVHPAVVIFTEEHEDRAGSGALERLLTRPLLHAKGVRQIHINPATDANMRRILTHIASAEGLG-------PSRSEVEAIVACSRGDLRHAILTLQLQLQGSRAAPNAPPRALARSDASASSS--HLLRQCTGGRKGEGGRGGEDKGGEGRGGRRVGRRREGEEAERKDTYMSSFHALGKVLHAKR-LPESDESRKGEGDP-------RGRLSFVPEEVLKRCEMEAEGLSAFVQTHALALFGDVEELAEAMAFFADADVLLARVYSTAFHRDRTDATFPEEYVLSILGRTVAHSNR-HPAGGQGTGFRGMTAPRYFEVLRQRRETGRRLGLLCQDYVGKVARAGRASSIRMTVGEMVDEMVPFAKQIGMP 861
ARPS + +N+ + + + P K T + P + +++E W + H+P A+L++ KK+ EV+ W+ + P KGG +L++ GP+G GKSA VQVLA+ L V W+ + S D R+ ++ D G G SQ F+ F+ R Y L+M+ GE D R L+++E+ P + R L F+ P + I ++ + S L + + GV I NP +M ++L+ I S + + P ++ +E + + S GD+R AI +LQ + A+ R A+A+SS +++ G RK + G + + G KD+ + F ALGK+L+ KR PE+ E +G P R RL PE V++R M E S ++Q + L F DVE++A A + +DAD L A S + EY S+ R + HSN H AG GFR + P + V ++ RE CQ A S +T + E++P+ Q+ P
Sbjct: 53 ARPSSTDLNSSKRLCKRRAVPNASK-LQTSTSTEPAQGDQDEP-------------WVDIHKPHSQAELAVHKKKIEEVEDWMR---------VHVDPKTAKGGA--VLLLTGPSGCGKSATVQVLAQELGYRVQEWSNPSSLSEYRPSADRSDPDTYRQTFDPDSRFNGFYGS---SQTGLFQEFLLRANKYNRLQMS-----------------------------------GEGGASDSDRKLILVEDFP-NQFYRQPGSLHDILRRFVKTCRRPLLFIVSDSLSGDSSS---RLLFPKHIQEELGVCNISFNPVAPTSMMKVLSRIVSVQAVKSGGKMCVPGKAALELLCSGSSGDIRSAINSLQFSCLTDQPMKKGF-SAVERGKATATSSGRAVVKATRGKRKAKDSEGRDKELAIGG----------------KDSSLFLFRALGKILYCKRESPEASEGSQGPSLPAHLSEHHRDRLLVDPEAVVERSHMSGEFFSLYLQQNYLEFFSDVEDVARASEYLSDADFLTAEWSSRSTM---------GEYGSSVATRGLLHSNSGHVAG----GFRPLHKPNWLLVNKKYREN-------CQ------AAQSLFISFCLTPVSLQTELLPYLAQLSNP 586
BLAST of EWM23144.1 vs. NCBI_GenBank
Match: gi|929245611|ref|XP_013998881.1| (PREDICTED: cell cycle checkpoint protein RAD17 [Salmo salar] >gi|929245613|ref|XP_013998882.1| PREDICTED: cell cycle checkpoint protein RAD17 [Salmo salar]) HSP 1 Score: 140.198 bits (352), Expect = 1.150e-30 Identity = 156/588 (26.53%), Postives = 241/588 (40.99%), Query Frame = 0
Query: 301 WTEKHRPRKAADLSIPPKKVREVQQWLEGALGLVCEESGLRPGAHKGGGQKLLVVRGPAGVGKSAMVQVLAEALELPVLRWT------EETPWESRED--AKRKKWEGDEMAMGGGGRQYVSQAEGFRAFV-RGAAYGPLEMAPSAKAGLDRSRDAGDPNACGDWADPGAEGRRQGPKGERKGEDVRRALLVMEEVPYHATGRAAAHFQAALASFLAASVHPAVVIFTEEHEDRAGSGALERLLTRPLLHAKGVRQIHINPATDANMRRILTHIASAEGLG-------PSRSEVEAIVACSRGDLRHAILTLQLQLQGSRAAPNAPPRALARSDASASSS--HLLRQCTGGRKGEGGRGGEDKGGEGRGGRRVGRRREGEEAERKDTYMSSFHALGKVLHAKR-LPESDESRKGEGDP-------RGRLSFVPEEVLKRCEMEAEGLSAFVQTHALALFGDVEELAEAMAFFADADVLLARVYSTAFHRDRTDATFPEEYVLSILGRTVAHSNR-HPAGGQGTGFRGMTAPRYFEVLRQRRETGRRLGLLCQDYVGKVARAGRASSIRMTVGEMVDEMVPFAKQIGMP 861
W + H+P A+L++ KK+ EV+ W+ + P KGG +L++ GP+G GKSA VQVLA+ L V W+ E P R D R+ ++ D G G SQ F+ F+ R Y L+M+ GE D R L+++E+ P + R L F+ P + I ++ + S L + + GV I NP +M ++L+ I S + + P ++ +E + + S GD+R AI +LQ ++ A+ R A+A+SS +++ G RK + G + + + GG KD + F ALGK+L+ KR PE E +G P R RL PE V++R M E S ++Q + L F DVE++A A + +DAD L A S + EY S+ R + HSN H AG GFR + P + V ++ RE CQ A S +T + E++P+ Q+ P
Sbjct: 95 WVDTHKPHSQAELAVHKKKIEEVEDWMR---------VHVDPKTAKGGA--VLLLTGPSGCGKSATVQVLAQELGYRVQEWSNPSSLSEYRPSADRSDPDTYRQTFDPDSRFNGFYGS---SQTGLFQEFLLRANKYNRLQMS-----------------------------------GEGGASDSDRKLILVEDFP-NQFYRQPGCLHDILRRFVKTCRRPLLFIVSDSLSGDSSS---RLLFPKHVQEELGVCNISFNPVAPTSMMKVLSRIVSVQAVKSGGKMCVPDKAALELLCSGSSGDIRSAINSLQFSCLTDQSMKKGF-WAVERGKATATSSGRAVVKATRGKRKAKDAEGRDKE--QAIGG--------------KDASLFLFRALGKILYCKRESPEGSEGSQGPSLPAHLSEHHRDRLLVDPEAVVERSHMSGEFFSLYLQQNYLEFFSDVEDVARASEYLSDADFLTAEWSSRSTM---------GEYGSSVATRGLLHSNSGHVAG----GFRPLHKPNWLLVNKKYREN-------CQ------AAQSLFISFCLTPVSLQTELLPYLAQLSNP 586
BLAST of EWM23144.1 vs. NCBI_GenBank
Match: gi|1158835190|ref|XP_020326171.1| (cell cycle checkpoint protein RAD17 [Oncorhynchus kisutch]) HSP 1 Score: 140.198 bits (352), Expect = 1.398e-30 Identity = 166/646 (25.70%), Postives = 261/646 (40.40%), Query Frame = 0
Query: 245 ARPSGSHVNALRLVFGKTPRPAPDKAFSTQAPSRPPRHNKEESTRGKSGALGAGSLWTEKHRPRKAADLSIPPKKVREVQQWLEGALGLVCEESGLRPGAHKGGGQKLLVVRGPAGVGKSAMVQVLAEALELPVLRWT------EETPWESRED--AKRKKWEGDEMAMGGGGRQYVSQAEGFRAFV-RGAAYGPLEMAPSAKAGLDRSRDAGDPNACGDWADPGAEGRRQGPKGERKGEDVRRALLVMEEVPYHATGRAAAHFQAALASFLAASVHPAVVIFTEEHEDRAGSGALERLLTRPLLHAKGVRQIHINPATDANMRRILTHIASAEGLG-------PSRSEVEAIVACSRGDLRHAILTLQLQLQGSRAAPNAPPRALARSDASASSSHLLRQCTGGRKGEGGRGGEDKGGEGRGGRRVGRRREGEEAER----KDTYMSSFHALGKVLHAKR-LPESDESRKGEGDP-------RGRLSFVPEEVLKRCEMEAEGLSAFVQTHALALFGDVEELAEAMAFFADADVLLARVYSTAFHRDRTDATFPEEYVLSILGRTVAHSNR-HPAGGQGTGFRGMTAPRYFEVLRQRRETGRRLGLLCQDYVGKVARAGRASSIRMTVGEMVDEMVPFAKQIGMP 861
ARPS + +N+ + + + P K T + P + +++E W + H+P A+L++ KK+ EV+ W+ + P KGG +L++ GP+G GKSA VQVLA+ L V W+ E P R D R+ ++ D G SQ F+ F+ R Y L+M+ GE D R L+++E+ P + R L F+ P + I ++ + S L + + GV I NP +M ++L+ I S + + P ++ +E + + S GD+R AI +LQ ++ A+ R A+A+SS GR + G+R + EG++ E KD+ + F ALGK+L+ KR PE E +G P R RL PE V++R M E S ++Q + L F DVE++A A + +DAD L A S + EY S+ R + HSN H AG GFR + P + V ++ RE CQ A S +T + E++P+ Q+ P
Sbjct: 53 ARPSSTDLNSSKRLRKRRADPNVSK-LQTSTSTEPAQGDQDEP-------------WVDTHKPHSQAELAVHKKKIEEVEDWMR---------VHVDPKTAKGGA--VLLLTGPSGCGKSATVQVLAQELGYRVQEWSNPSSLSEYRPSADRADPDTYRQTFDPDSRFNCFYGS---SQTGLFQEFLLRANKYNRLQMS-----------------------------------GEGGASDSDRKLILVEDFP-NQFYRQPGSLHDVLRRFVKTCRRPLLFIVSDSLSGDSSSRLL---FPKHIQEELGVCNISFNPVAPTSMMKVLSRIVSVQAVKSGGKMCVPDKAALELLCSGSSGDIRSAINSLQFSCLTDQSMKKGF-SAVERGKATATSS--------------GRAVV----KAMRGKRKAKDSEGQDKELAIGGKDSSLFLFRALGKILYCKRESPEGSEGSQGPSLPAHLSEHHRDRLLVDPEAVVERSHMSGEFFSLYLQQNYLEFFSDVEDVARASEYLSDADFLTAEWSSRSTM---------GEYGSSVATRGLLHSNSGHVAG----GFRPLHKPNWLLVNKKYREN-------CQ------AAQSLFISFCLTPVSLQTELLPYLAQLSNP 586 The following BLAST results are available for this feature:
BLAST of EWM23144.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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