EWM29891.1, cds750 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM29891.1 vs. NCBI_GenBank
Match: gi|585112474|gb|EWM29891.1| (hypothetical protein Naga_100035g8 [Nannochloropsis gaditana]) HSP 1 Score: 653.284 bits (1684), Expect = 0.000e+0 Identity = 319/319 (100.00%), Postives = 319/319 (100.00%), Query Frame = 0
Query: 1 MGKTTTKRSMTSKVGKPSSSTRSSKELMIPSSETVELQDLSTLAKQMEEQLMQEFEVLLSARRKKENSGAVGNSLNAGITGNRGDKDQDARDALYWKHMYERLRDLRETDAERLLRESVQHADERERSLLDLISHLEEGGATDGARRSRSKSGKMDVRLSDVSLCEFSGRDTRSTAMEVGGQSEAKAVGHQDTRELQAQIATLQGKLSDLKRILIAYQRFTSLCISMEREASAPGGMSKLSCTAINHVHKKAVKFSLKMNVDVEDSSNMDATFRPEANKELFPPFLQQEATLETKQCPLLLLSILKTLFDEKKNGAGKE 319
MGKTTTKRSMTSKVGKPSSSTRSSKELMIPSSETVELQDLSTLAKQMEEQLMQEFEVLLSARRKKENSGAVGNSLNAGITGNRGDKDQDARDALYWKHMYERLRDLRETDAERLLRESVQHADERERSLLDLISHLEEGGATDGARRSRSKSGKMDVRLSDVSLCEFSGRDTRSTAMEVGGQSEAKAVGHQDTRELQAQIATLQGKLSDLKRILIAYQRFTSLCISMEREASAPGGMSKLSCTAINHVHKKAVKFSLKMNVDVEDSSNMDATFRPEANKELFPPFLQQEATLETKQCPLLLLSILKTLFDEKKNGAGKE
Sbjct: 1 MGKTTTKRSMTSKVGKPSSSTRSSKELMIPSSETVELQDLSTLAKQMEEQLMQEFEVLLSARRKKENSGAVGNSLNAGITGNRGDKDQDARDALYWKHMYERLRDLRETDAERLLRESVQHADERERSLLDLISHLEEGGATDGARRSRSKSGKMDVRLSDVSLCEFSGRDTRSTAMEVGGQSEAKAVGHQDTRELQAQIATLQGKLSDLKRILIAYQRFTSLCISMEREASAPGGMSKLSCTAINHVHKKAVKFSLKMNVDVEDSSNMDATFRPEANKELFPPFLQQEATLETKQCPLLLLSILKTLFDEKKNGAGKE 319
BLAST of EWM29891.1 vs. NCBI_GenBank
Match: gi|298711114|emb|CBJ32342.1| (expressed unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 77.411 bits (189), Expect = 4.392e-12 Identity = 63/229 (27.51%), Postives = 98/229 (42.79%), Query Frame = 0
Query: 92 DALYWKHMYERLRDLRETDAERLLRESVQHADERERSLLDLISHL--EEGGATDGARRSRSKSGKMDVRLSDVSLCEFSGRDTRSTAMEVGGQSEAKAVGHQDTRELQAQIATLQGKLSDLKRILIAYQRFTSLCISMEREASAPGG---------MSKLSCTAINHVHKKAVKFSLKMNVDVEDSSNMDATFRPEANKELFPPFLQQEATLETKQCPLLLLSILKTLF 309
+A YWK MY+ L LR T E L +HA ER+R+ I L + GGA + S + + S +E G + ++ + L+ K ++I+ YQ +SL I + + G + ++CTA+NHVH++AV+F LK+ + ED D +R N L P ++Q QCPL L +L+ LF
Sbjct: 425 EAEYWKGMYDELASLRHTMPEEQLALFKEHAAERDRTSASYIEQLRKKNGGAAEKPSPSAAPGAAAGAEPGAAPAAAPATVGAPSAGVEEG----------EYCSFSESYVRGLEEKQVYHRKIIRLYQNLSSLAIHPKEKKKGSGDAGGDAGKRDLDVITCTAVNHVHRRAVRFDLKIPHE-EDVG--DFAYRATGNTHLLPEYMQHPLLFTKNQCPLFLTKLLQNLF 640 The following BLAST results are available for this feature:
BLAST of EWM29891.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 2
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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