EWM23181.1, cds7492 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23181.1 vs. NCBI_GenBank
Match: gi|585104064|gb|EWM23181.1| (poly polymerase-like protein, partial [Nannochloropsis gaditana]) HSP 1 Score: 829.321 bits (2141), Expect = 0.000e+0 Identity = 419/419 (100.00%), Postives = 419/419 (100.00%), Query Frame = 0
Query: 1 MAHPPSTVPPFLGVSPPVNVDPPTEAEREATRHLEAFLKEAGSYESEGMSAARVKVIAKLQRMAEAWCEDLHGKAGSCPAAAPRSDALSRLATQAASNDRDGSTAHPPAASLPSLPSEPRQASHPKPLLLPFGSYRLDCHDPTSDLDLLLVLPRGLASRADFFQDFAGRVLRHHSGVSGLCPVPEAYTPVLKFRMDGLAVDLLFVALHGAEGGAKGGGELSGADLLDPSFLRGLDEWEVRSLNGVRVAEAILRLVPEPAAFSLTLRALKLWARRRKLYSSVLGFLGGVNLAILAAFVCQKYPLATPATLLLAFFRVYARWPWPSPAHPVLLCPLPPPPHPACAHLSSWTPSPAAGTRPLPPSLMTIVTPTFPAMNSAHNVGLPQLRRLQEELRRAESLTRPWLLDPRHLRRLQGGWRAL 419
MAHPPSTVPPFLGVSPPVNVDPPTEAEREATRHLEAFLKEAGSYESEGMSAARVKVIAKLQRMAEAWCEDLHGKAGSCPAAAPRSDALSRLATQAASNDRDGSTAHPPAASLPSLPSEPRQASHPKPLLLPFGSYRLDCHDPTSDLDLLLVLPRGLASRADFFQDFAGRVLRHHSGVSGLCPVPEAYTPVLKFRMDGLAVDLLFVALHGAEGGAKGGGELSGADLLDPSFLRGLDEWEVRSLNGVRVAEAILRLVPEPAAFSLTLRALKLWARRRKLYSSVLGFLGGVNLAILAAFVCQKYPLATPATLLLAFFRVYARWPWPSPAHPVLLCPLPPPPHPACAHLSSWTPSPAAGTRPLPPSLMTIVTPTFPAMNSAHNVGLPQLRRLQEELRRAESLTRPWLLDPRHLRRLQGGWRAL
Sbjct: 1 MAHPPSTVPPFLGVSPPVNVDPPTEAEREATRHLEAFLKEAGSYESEGMSAARVKVIAKLQRMAEAWCEDLHGKAGSCPAAAPRSDALSRLATQAASNDRDGSTAHPPAASLPSLPSEPRQASHPKPLLLPFGSYRLDCHDPTSDLDLLLVLPRGLASRADFFQDFAGRVLRHHSGVSGLCPVPEAYTPVLKFRMDGLAVDLLFVALHGAEGGAKGGGELSGADLLDPSFLRGLDEWEVRSLNGVRVAEAILRLVPEPAAFSLTLRALKLWARRRKLYSSVLGFLGGVNLAILAAFVCQKYPLATPATLLLAFFRVYARWPWPSPAHPVLLCPLPPPPHPACAHLSSWTPSPAAGTRPLPPSLMTIVTPTFPAMNSAHNVGLPQLRRLQEELRRAESLTRPWLLDPRHLRRLQGGWRAL 419
BLAST of EWM23181.1 vs. NCBI_GenBank
Match: gi|676388201|ref|XP_009037379.1| (hypothetical protein AURANDRAFT_27130, partial [Aureococcus anophagefferens] >gi|323452142|gb|EGB08017.1| hypothetical protein AURANDRAFT_27130, partial [Aureococcus anophagefferens]) HSP 1 Score: 254.218 bits (648), Expect = 1.252e-76 Identity = 164/413 (39.71%), Postives = 219/413 (53.03%), Query Frame = 0
Query: 12 LGVSPPVNVDPPTEAEREATRHLEAFLKEAGSYESEGMSAARVKVIAKLQRMAEAWCEDLHGKAGSCPAAAPRSDALSRLATQAASNDRDGSTAHPPAASLPSLPSEPRQASHPKPLLLPFGSYRLDCHDPTSDLDLLLVLPRGLASRADFFQDFAGRVLRHHSGVSGLCPVPEAYTPVLKFRMDGLAVDLLFVALHGAEGGAKGGGEL-SGADLLDPSFLRGLDEWEVRSLNGVRVAEAILRLVPEPAAFSLTLRALKLWARRRKLYSSVLGFLGGVNLAILAAFVCQKYPLATPATLLLAFFRVYARWPWPSPAHPVLLCPLPPPPHPA-----CAHLSSWTPSPAAGTRPLPPSLMTIVTPTFPAMNSAHNVGLPQLRRLQEELRRAESLTRPWLLDPRHLRRLQGGWRA 418
LGV+PP+N D P E + A+ L L+E G YES+ A R V+ +L+ +A+AWCE+ A ++ A A +R + + PP L + FGS RLD H P +D+D++LV PR RA F A H G G+ V +AYTPV+K R+ VDLLF L EL D++D + L GLDE +RSLNG RVAE +L LVP+PA F + LRA+K WAR + LYS+VLG LGGVN AILAAFVCQ+YP A P+T++ FFR++ W WP +PVL+ PP A + ++W P R L IVTP P MNS++NVG PQLR +++EL + T R + +L WRA
Sbjct: 13 LGVTPPINTDMPAEHDAAASEALVHTLRELGVYESDAGKAVRTGVLDRLRAIADAWCENEWALA------------IAERACDGADCERALAASAPPRCELRT-----------------FGSVRLDVHTPDADIDVVLVAPRHCTRRAFFDTLVAALEGDAHIGAGGVMAVRDAYTPVVKLRVGATDVDLLFAPL--------ACDELPEPLDVMDDAVLEGLDEAAIRSLNGARVAEMLLSLVPDPAVFRVALRAVKRWARCKGLYSNVLGLLGGVNCAILAAFVCQRYPNAAPSTVVGRFFRIFDGWDWP---NPVLIAAPGAPPSSAGDESVASRYAAWNPRLNPRDR---AHLAPIVTPAHPTMNSSYNVGAPQLRAIKDELSKGLETT-------RRVEKLAAHWRA 375
BLAST of EWM23181.1 vs. NCBI_GenBank
Match: gi|302804859|ref|XP_002984181.1| (hypothetical protein SELMODRAFT_180849, partial [Selaginella moellendorffii] >gi|300148030|gb|EFJ14691.1| hypothetical protein SELMODRAFT_180849, partial [Selaginella moellendorffii]) HSP 1 Score: 237.269 bits (604), Expect = 1.283e-69 Identity = 149/395 (37.72%), Postives = 204/395 (51.65%), Query Frame = 0
Query: 6 STVPPFLGVSPPVNVDPPTEAEREATRHLEAFLKEAGSYESEGMSAARVKVIAKLQRMAEAWCEDLHGKAGSCPAAAPRSDALSRLATQAASNDRDGSTAHPPAASLPSLPSEPRQASHPKPLLLPFGSYRLDCHDPTSDLDLLLVLPRGLASRADFFQDFAGRVLRHHSGVSGLCPVPEAYTPVLKFRMDGLAVDLLFVALHGAEGGAKGGGELSGADLLDPSFLRGLDEWEVRSLNGVRVAEAILRLVPEPAAFSLTLRALKLWARRRKLYSSVLGFLGGVNLAILAAFVCQKYPLATPATLLLAFFRVYARWPWPSPAHPVLLCPLPPPPHPACAHLSSWTP--SPAAGTRPLPPSLMTIVTPTFPAMNSAHNVGLPQLRRLQEELRRAESL 398
S +LGV+ P++ PTEA+ TR LE L EAG YES + R +V+ +L ++ + W +++ + G S TQ A+ + FGSYRL H P +D+D L V PR ++ DFF F G +L S V+ L PVP+A+ PV++F+ G+++DLL+ L D+ S LR LDE VRSLNG RV + ILRLVP F TLR +KLWAR+R +YS+V GFLGGVN A+L A +CQ YP A P+ L+ FFRVY +W WP+ PV+LC + LS W P +P T +P I+TP +P MNS++NV LR + EE RA +
Sbjct: 4 SNGKKYLGVTEPISTAGPTEADFARTRDLEKVLTEAGLYESPEEAVQREEVLGRLDQLVKEWVKNICLRKG-----------YSEQVTQEANAK-----------------------------IFTFGSYRLGVHGPGTDIDTLCVGPRHVSREEDFFGVFHG-MLEAMSEVTELHPVPDAHVPVMRFKFSGISIDLLYAPLAVWTIP-------EDLDISQESILRNLDEPSVRSLNGCRVTDQILRLVPNIEHFRTTLRCMKLWARKRGVYSNVTGFLGGVNWALLVARICQLYPNALPSMLVSRFFRVYTQWRWPN---PVMLCEI----EEGSLGLSVWDPRKNPRDRTHQMP-----IITPAYPCMNSSYNVSSSTLRVMVEEFSRANGI 338
BLAST of EWM23181.1 vs. NCBI_GenBank
Match: gi|302780986|ref|XP_002972267.1| (hypothetical protein SELMODRAFT_231918 [Selaginella moellendorffii] >gi|300159734|gb|EFJ26353.1| hypothetical protein SELMODRAFT_231918 [Selaginella moellendorffii]) HSP 1 Score: 236.884 bits (603), Expect = 6.889e-69 Identity = 149/395 (37.72%), Postives = 204/395 (51.65%), Query Frame = 0
Query: 6 STVPPFLGVSPPVNVDPPTEAEREATRHLEAFLKEAGSYESEGMSAARVKVIAKLQRMAEAWCEDLHGKAGSCPAAAPRSDALSRLATQAASNDRDGSTAHPPAASLPSLPSEPRQASHPKPLLLPFGSYRLDCHDPTSDLDLLLVLPRGLASRADFFQDFAGRVLRHHSGVSGLCPVPEAYTPVLKFRMDGLAVDLLFVALHGAEGGAKGGGELSGADLLDPSFLRGLDEWEVRSLNGVRVAEAILRLVPEPAAFSLTLRALKLWARRRKLYSSVLGFLGGVNLAILAAFVCQKYPLATPATLLLAFFRVYARWPWPSPAHPVLLCPLPPPPHPACAHLSSWTP--SPAAGTRPLPPSLMTIVTPTFPAMNSAHNVGLPQLRRLQEELRRAESL 398
S +LGV+ P++ PTEA+ TR LE L EAG YES + R +V+ +L ++ + W +++ + G S TQ A+ + FGSYRL H P +D+D L V PR ++ DFF F G +L S V+ L PVP+A+ PV++F+ G+++DLL+ L D+ S LR LDE VRSLNG RV + ILRLVP F TLR +KLWAR+R +YS+V GFLGGVN A+L A +CQ YP A P+ L+ FFRVY +W WP +PV+LC + LS W P +P T +P I+TP +P MNS++NV LR + EE RA +
Sbjct: 4 SNGKKYLGVTEPISTAGPTEADFARTRDLEKVLTEAGLYESPEEAVQREEVLGRLDQLVKEWVKNICLRKG-----------YSEQLTQEANAK-----------------------------IFTFGSYRLGVHGPGTDIDTLCVGPRHVSREEDFFGVFHG-MLEAMSEVTELHPVPDAHVPVMRFKFSGISIDLLYAPLAVWTIPED-------LDISQESILRNLDEPSVRSLNGCRVTDQILRLVPNIEHFRTTLRCMKLWARKRGVYSNVTGFLGGVNWALLVARICQLYPNALPSMLVSRFFRVYTQWRWP---NPVMLCEI----EEGSLGLSVWDPRKNPRDRTHQMP-----IITPAYPCMNSSYNVSSSTLRVMVEEFSRANGI 338
BLAST of EWM23181.1 vs. NCBI_GenBank
Match: gi|508779688|gb|EOY26944.1| (Nucleic acid binding protein, putative isoform 1 [Theobroma cacao]) HSP 1 Score: 237.269 bits (604), Expect = 6.540e-68 Identity = 150/407 (36.86%), Postives = 207/407 (50.86%), Query Frame = 0
Query: 4 PPSTVP-PFLGVSPPVNVDPPTEAEREATRHLEAFLKEAGSYESEGMSAARVKVIAKLQRMAEAWCEDLHGKAGSCPAAAPRSDALSRLATQAASNDRDGSTAHPPAASLPSLPSEPRQASHPKPLLLPFGSYRLDCHDPTSDLDLLLVLPRGLASRADFFQDFAGRVLRHHSGVSGLCPVPEAYTPVLKFRMDGLAVDLLFVALHGAEGGAKGGGEL----SGADLLDPSFLRGLDEWEVRSLNGVRVAEAILRLVPEPAAFSLTLRALKLWARRRKLYSSVLGFLGGVNLAILAAFVCQKYPLATPATLLLAFFRVYARWPWPSPAHPVLLCPLPPPPHPACAHLSSWTPSPAAGTRPLPPSLMTIVTPTFPAMNSAHNVGLPQLRRLQEELRRAESLTRPWLLD 405
PP VP GV+ P+++ PTEA+ + +R LE FL EAG Y+SE +A R +V+ ++Q + W + L+RL G T + K ++L FGSYRL H P SD+D L V P + DFF +L V+ L PVP+A+ PV+KF+ DG+++DLL+ ++ L D+ D S L +DE VRSLNG RVA+ IL+LVP F TLR LK WA+RR +YS+V GFLGGVN A+L A VCQ YP A P L+ FFRV+ +W WP +PV+LC + S W P R LM I+TP +P MNS++NV LR + E+L+ ++ L+
Sbjct: 12 PPVAVPVEQYGVTKPISMAGPTEADIQRSRELEKFLVEAGLYDSEEETAKREEVLGRIQDIVTDWVK-----------------QLTRLR---------GYTG--------------QMVEDAKAVILTFGSYRLGVHGPGSDVDTLCVGPSYVNREEDFFF-VLHNILAEREEVTELQPVPDAHVPVMKFKFDGISIDLLYASI-----------SLLVVPQDLDISDVSVLYNVDEPTVRSLNGCRVADQILKLVPNAEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPIMLVSRFFRVFTQWRWP---NPVMLCAIEEDE----LGFSVWDPRKNPRDR---THLMPIITPAYPCMNSSYNVSASTLRVMTEQLKYGNNICEEIQLN 356
BLAST of EWM23181.1 vs. NCBI_GenBank
Match: gi|508779690|gb|EOY26946.1| (Nucleic acid binding protein, putative isoform 3 [Theobroma cacao]) HSP 1 Score: 237.654 bits (605), Expect = 6.574e-68 Identity = 150/407 (36.86%), Postives = 207/407 (50.86%), Query Frame = 0
Query: 4 PPSTVP-PFLGVSPPVNVDPPTEAEREATRHLEAFLKEAGSYESEGMSAARVKVIAKLQRMAEAWCEDLHGKAGSCPAAAPRSDALSRLATQAASNDRDGSTAHPPAASLPSLPSEPRQASHPKPLLLPFGSYRLDCHDPTSDLDLLLVLPRGLASRADFFQDFAGRVLRHHSGVSGLCPVPEAYTPVLKFRMDGLAVDLLFVALHGAEGGAKGGGEL----SGADLLDPSFLRGLDEWEVRSLNGVRVAEAILRLVPEPAAFSLTLRALKLWARRRKLYSSVLGFLGGVNLAILAAFVCQKYPLATPATLLLAFFRVYARWPWPSPAHPVLLCPLPPPPHPACAHLSSWTPSPAAGTRPLPPSLMTIVTPTFPAMNSAHNVGLPQLRRLQEELRRAESLTRPWLLD 405
PP VP GV+ P+++ PTEA+ + +R LE FL EAG Y+SE +A R +V+ ++Q + W + L+RL G T + K ++L FGSYRL H P SD+D L V P + DFF +L V+ L PVP+A+ PV+KF+ DG+++DLL+ ++ L D+ D S L +DE VRSLNG RVA+ IL+LVP F TLR LK WA+RR +YS+V GFLGGVN A+L A VCQ YP A P L+ FFRV+ +W WP +PV+LC + S W P R LM I+TP +P MNS++NV LR + E+L+ ++ L+
Sbjct: 12 PPVAVPVEQYGVTKPISMAGPTEADIQRSRELEKFLVEAGLYDSEEETAKREEVLGRIQDIVTDWVK-----------------QLTRLR---------GYTG--------------QMVEDAKAVILTFGSYRLGVHGPGSDVDTLCVGPSYVNREEDFFF-VLHNILAEREEVTELQPVPDAHVPVMKFKFDGISIDLLYASI-----------SLLVVPQDLDISDVSVLYNVDEPTVRSLNGCRVADQILKLVPNAEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPIMLVSRFFRVFTQWRWP---NPVMLCAIEEDE----LGFSVWDPRKNPRDR---THLMPIITPAYPCMNSSYNVSASTLRVMTEQLKYGNNICEEIQLN 356
BLAST of EWM23181.1 vs. NCBI_GenBank
Match: gi|508779689|gb|EOY26945.1| (Nucleic acid binding protein, putative isoform 2 [Theobroma cacao]) HSP 1 Score: 237.654 bits (605), Expect = 6.623e-68 Identity = 150/407 (36.86%), Postives = 207/407 (50.86%), Query Frame = 0
Query: 4 PPSTVP-PFLGVSPPVNVDPPTEAEREATRHLEAFLKEAGSYESEGMSAARVKVIAKLQRMAEAWCEDLHGKAGSCPAAAPRSDALSRLATQAASNDRDGSTAHPPAASLPSLPSEPRQASHPKPLLLPFGSYRLDCHDPTSDLDLLLVLPRGLASRADFFQDFAGRVLRHHSGVSGLCPVPEAYTPVLKFRMDGLAVDLLFVALHGAEGGAKGGGEL----SGADLLDPSFLRGLDEWEVRSLNGVRVAEAILRLVPEPAAFSLTLRALKLWARRRKLYSSVLGFLGGVNLAILAAFVCQKYPLATPATLLLAFFRVYARWPWPSPAHPVLLCPLPPPPHPACAHLSSWTPSPAAGTRPLPPSLMTIVTPTFPAMNSAHNVGLPQLRRLQEELRRAESLTRPWLLD 405
PP VP GV+ P+++ PTEA+ + +R LE FL EAG Y+SE +A R +V+ ++Q + W + L+RL G T + K ++L FGSYRL H P SD+D L V P + DFF +L V+ L PVP+A+ PV+KF+ DG+++DLL+ ++ L D+ D S L +DE VRSLNG RVA+ IL+LVP F TLR LK WA+RR +YS+V GFLGGVN A+L A VCQ YP A P L+ FFRV+ +W WP +PV+LC + S W P R LM I+TP +P MNS++NV LR + E+L+ ++ L+
Sbjct: 12 PPVAVPVEQYGVTKPISMAGPTEADIQRSRELEKFLVEAGLYDSEEETAKREEVLGRIQDIVTDWVK-----------------QLTRLR---------GYTG--------------QMVEDAKAVILTFGSYRLGVHGPGSDVDTLCVGPSYVNREEDFFF-VLHNILAEREEVTELQPVPDAHVPVMKFKFDGISIDLLYASI-----------SLLVVPQDLDISDVSVLYNVDEPTVRSLNGCRVADQILKLVPNAEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPIMLVSRFFRVFTQWRWP---NPVMLCAIEEDE----LGFSVWDPRKNPRDR---THLMPIITPAYPCMNSSYNVSASTLRVMTEQLKYGNNICEEIQLN 356
BLAST of EWM23181.1 vs. NCBI_GenBank
Match: gi|1021566618|ref|XP_016174556.1| (nuclear poly(A) polymerase 4 isoform X1 [Arachis ipaensis]) HSP 1 Score: 236.498 bits (602), Expect = 1.749e-67 Identity = 140/389 (35.99%), Postives = 206/389 (52.96%), Query Frame = 0
Query: 13 GVSPPVNVDPPTEAEREATRHLEAFLKEAGSYESEGMSAARVKVIAKLQRMAEAWCEDLHGKAGSCPAAAPRSDALSRLATQAASNDRDGSTAHPPAASLPSLPSEPRQASHPKPLLLPFGSYRLDCHDPTSDLDLLLVLPRGLASRADFFQDFA-GRVLRHHSGVSGLCPVPEAYTPVLKFRMDGLAVDLLFVALHGAEGGAKGGGELSGADLLDPSFLRGLDEWEVRSLNGVRVAEAILRLVPEPAAFSLTLRALKLWARRRKLYSSVLGFLGGVNLAILAAFVCQKYPLATPATLLLAFFRVYARWPWPSPAHPVLLCPLPPPPHPACAHLSSWTP--SPAAGTRPLPPSLMTIVTPTFPAMNSAHNVGLPQLRRLQEELRRAESL 398
GV+ P++ PT A+ + T+ LE FL ++G YESE +A RV+V+ +L ++ ++W + L + G ++A+ + FGSYRL H P +DLD L + P + DFF FA +L + ++ L P+P+A+ PV+KF+ DG+++DLL+ ++ D+ D S L+ +DE VRSLNG RVA+ IL+LVP F TLR LK WA+RR +YS+V GFLGGVNLA+L A VCQ YP A P+ L+ FFRVY +W WP +PV+LCP+ S W P +P T +P I+TP +P MNS++NV LR + E+ + + +
Sbjct: 15 GVTKPISKAGPTVADIQRTKELEKFLVDSGLYESEEEAAKRVEVLHRLGQVLKSWVKMLTRRRGYTDQMVEDANAV----------------------------------------IFTFGSYRLGVHGPGADLDTLCIGPSYVNREEDFF--FALHDILANMEEITELQPIPDAHVPVMKFKFDGISIDLLYASISCLV-------VRDDLDIADVSILQNIDEPTVRSLNGCRVADQILKLVPNVENFRTTLRCLKFWAKRRGVYSNVTGFLGGVNLALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWP---NPVMLCPIEENE----LGFSVWDPRKNPRDRTHHMP-----IITPAYPCMNSSYNVSTSTLRVMMEQFQYSNKI 342
BLAST of EWM23181.1 vs. NCBI_GenBank
Match: gi|673052403|ref|XP_008880162.1| (hypothetical protein, variant [Aphanomyces invadans] >gi|574464275|gb|ETV91325.1| hypothetical protein, variant [Aphanomyces invadans]) HSP 1 Score: 228.794 bits (582), Expect = 2.789e-67 Identity = 152/388 (39.18%), Postives = 201/388 (51.80%), Query Frame = 0
Query: 13 GVSPPVNVDPPTEAEREATRHLEAFLKEAGSYESEGMSAARVKVIAKLQRMAEAWCEDLHGKAGSCPAAAPRSDALSRLATQAASNDRDGSTAHPPAASLPSLPSEPRQASHPKPLLLPFGSYRLDCHDPTSDLDLLLVLPRGLASRADFFQDFAGRVLRHHSGVSGLCPVPEAYTPVLKFRMDGLAVDLLFVALHGAEGGAKGGGELSGADLLDPSFLRGLDEWEVRSLNGVRVAEAILRLVPEPAAFSLTLRALKLWARRRKLYSSVLGFLGGVNLAILAAFVCQKYPLATPATLLLAFFRVYARWPWPSPAHPVLLCPLPPP--PHPACAHLSSWTPSPAAGTRPLPPSLMTIVTPTFPAMNSAHNVGLPQLRRLQEELRRAESL 398
G++PP+++ PT + + T L L++ YES S R + + E W ++ K G A +L+++ T FGSYRL H P +D+D L + PR SR FF F +L+H + V+ + +P+AY PV+KF++ G+A+DLLFVAL A DLLDP LR +DE VRSLNG RVAE IL+LVP F LTL A+K WAR R +YS+VLGFLGGVN AIL A VCQ YP + TLL FFRVY +W WP+ P+LL + H HL SW P R LM I+TP FPAMNS++NV LR +Q E R+A ++
Sbjct: 9 GITPPISLAGPTSTDHQLTSSLTDTLRQWNLYESAEGSLRRENALELVGAWVEQWAQNEATKRGLVVDAT----SLTQIRT--------------------------------------FGSYRLGVHSPEADIDTLCLAPRH-CSRLGFFTSFP-LLLKHQAQVTSVHSIPDAYVPVIKFQVLGVAIDLLFVALDVASVP-------EDIDLLDPKTLRDVDEPGVRSLNGCRVAEMILQLVPNLDQFRLTLVAVKHWARMRGIYSNVLGFLGGVNWAILVARVCQLYPQSLAGTLLTKFFRVYHQWIWPN---PILLNNIMDDDGKHAELHHLQSWNPKLYPRDR---LHLMPIITPAFPAMNSSYNVLDCTLRLMQAEFRQAATV 339
BLAST of EWM23181.1 vs. NCBI_GenBank
Match: gi|1012230976|ref|XP_015938371.1| (nuclear poly(A) polymerase 4 isoform X1 [Arachis duranensis]) HSP 1 Score: 235.343 bits (599), Expect = 4.477e-67 Identity = 138/388 (35.57%), Postives = 204/388 (52.58%), Query Frame = 0
Query: 13 GVSPPVNVDPPTEAEREATRHLEAFLKEAGSYESEGMSAARVKVIAKLQRMAEAWCEDLHGKAGSCPAAAPRSDALSRLATQAASNDRDGSTAHPPAASLPSLPSEPRQASHPKPLLLPFGSYRLDCHDPTSDLDLLLVLPRGLASRADFFQDFAGRVLRHHSGVSGLCPVPEAYTPVLKFRMDGLAVDLLFVALHGAEGGAKGGGELSGADLLDPSFLRGLDEWEVRSLNGVRVAEAILRLVPEPAAFSLTLRALKLWARRRKLYSSVLGFLGGVNLAILAAFVCQKYPLATPATLLLAFFRVYARWPWPSPAHPVLLCPLPPPPHPACAHLSSWTP--SPAAGTRPLPPSLMTIVTPTFPAMNSAHNVGLPQLRRLQEELRRAESL 398
GV+ P++ PT A+ + T+ LE FL ++G YESE +A RV+V+ +L ++ ++W + L + G ++A+ + FGSYRL H P +DLD L + P + DFF +L + ++ L P+P+A+ PV+KF+ DG+++DLL+ ++ D+ D S L+ +DE VRSLNG RVA+ IL+LVP F TLR LK WA+RR +YS+V GFLGGVNLA+L A VCQ YP A P+ L+ FFRVY +W WP +PV+LCP+ S W P +P T +P I+TP +P MNS++NV LR + E+ + + +
Sbjct: 15 GVTKPISKAGPTVADIQRTKELEKFLVDSGLYESEEEAAKRVEVLHRLGQVLKSWVKMLTRRRGYTDQMVEDANAV----------------------------------------IFTFGSYRLGVHGPGADLDTLCIGPSYVNREEDFFFVLHD-ILANMEEITELQPIPDAHVPVMKFKFDGISIDLLYASISCLV-------VRDDLDIADVSILQNIDEPTVRSLNGCRVADQILKLVPNVQNFRTTLRCLKFWAKRRGVYSNVTGFLGGVNLALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWP---NPVMLCPIEENE----LGFSVWDPRKNPRDRTHHMP-----IITPAYPCMNSSYNVSTSTLRVMMEQFQYSNKI 342 The following BLAST results are available for this feature:
BLAST of EWM23181.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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