EWM23181.1, cds7492 (CDS) Nannochloropsis gaditana

Overview
NameEWM23181.1
Unique Namecds7492
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002472.1:129542..130797 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23181.1
Productpoly polymerase-like protein
Partialtrue
Orig transcript idgnl|cribi|Naga_101132g2.2567.mrna
GbkeyCDS
End range.
End range130797
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002472.1supercontigCM002472.1:129542..130797 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0043631RNA polyadenylation
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0004652polynucleotide adenylyltransferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR014492PolyA_polymerase
IPR007012PolA_pol_cen_dom
Homology
BLAST of EWM23181.1 vs. NCBI_GenBank
Match: gi|585104064|gb|EWM23181.1| (poly polymerase-like protein, partial [Nannochloropsis gaditana])

HSP 1 Score: 829.321 bits (2141), Expect = 0.000e+0
Identity = 419/419 (100.00%), Postives = 419/419 (100.00%), Query Frame = 0
Query:    1 MAHPPSTVPPFLGVSPPVNVDPPTEAEREATRHLEAFLKEAGSYESEGMSAARVKVIAKLQRMAEAWCEDLHGKAGSCPAAAPRSDALSRLATQAASNDRDGSTAHPPAASLPSLPSEPRQASHPKPLLLPFGSYRLDCHDPTSDLDLLLVLPRGLASRADFFQDFAGRVLRHHSGVSGLCPVPEAYTPVLKFRMDGLAVDLLFVALHGAEGGAKGGGELSGADLLDPSFLRGLDEWEVRSLNGVRVAEAILRLVPEPAAFSLTLRALKLWARRRKLYSSVLGFLGGVNLAILAAFVCQKYPLATPATLLLAFFRVYARWPWPSPAHPVLLCPLPPPPHPACAHLSSWTPSPAAGTRPLPPSLMTIVTPTFPAMNSAHNVGLPQLRRLQEELRRAESLTRPWLLDPRHLRRLQGGWRAL 419
            MAHPPSTVPPFLGVSPPVNVDPPTEAEREATRHLEAFLKEAGSYESEGMSAARVKVIAKLQRMAEAWCEDLHGKAGSCPAAAPRSDALSRLATQAASNDRDGSTAHPPAASLPSLPSEPRQASHPKPLLLPFGSYRLDCHDPTSDLDLLLVLPRGLASRADFFQDFAGRVLRHHSGVSGLCPVPEAYTPVLKFRMDGLAVDLLFVALHGAEGGAKGGGELSGADLLDPSFLRGLDEWEVRSLNGVRVAEAILRLVPEPAAFSLTLRALKLWARRRKLYSSVLGFLGGVNLAILAAFVCQKYPLATPATLLLAFFRVYARWPWPSPAHPVLLCPLPPPPHPACAHLSSWTPSPAAGTRPLPPSLMTIVTPTFPAMNSAHNVGLPQLRRLQEELRRAESLTRPWLLDPRHLRRLQGGWRAL
Sbjct:    1 MAHPPSTVPPFLGVSPPVNVDPPTEAEREATRHLEAFLKEAGSYESEGMSAARVKVIAKLQRMAEAWCEDLHGKAGSCPAAAPRSDALSRLATQAASNDRDGSTAHPPAASLPSLPSEPRQASHPKPLLLPFGSYRLDCHDPTSDLDLLLVLPRGLASRADFFQDFAGRVLRHHSGVSGLCPVPEAYTPVLKFRMDGLAVDLLFVALHGAEGGAKGGGELSGADLLDPSFLRGLDEWEVRSLNGVRVAEAILRLVPEPAAFSLTLRALKLWARRRKLYSSVLGFLGGVNLAILAAFVCQKYPLATPATLLLAFFRVYARWPWPSPAHPVLLCPLPPPPHPACAHLSSWTPSPAAGTRPLPPSLMTIVTPTFPAMNSAHNVGLPQLRRLQEELRRAESLTRPWLLDPRHLRRLQGGWRAL 419          
BLAST of EWM23181.1 vs. NCBI_GenBank
Match: gi|676388201|ref|XP_009037379.1| (hypothetical protein AURANDRAFT_27130, partial [Aureococcus anophagefferens] >gi|323452142|gb|EGB08017.1| hypothetical protein AURANDRAFT_27130, partial [Aureococcus anophagefferens])

HSP 1 Score: 254.218 bits (648), Expect = 1.252e-76
Identity = 164/413 (39.71%), Postives = 219/413 (53.03%), Query Frame = 0
Query:   12 LGVSPPVNVDPPTEAEREATRHLEAFLKEAGSYESEGMSAARVKVIAKLQRMAEAWCEDLHGKAGSCPAAAPRSDALSRLATQAASNDRDGSTAHPPAASLPSLPSEPRQASHPKPLLLPFGSYRLDCHDPTSDLDLLLVLPRGLASRADFFQDFAGRVLRHHSGVSGLCPVPEAYTPVLKFRMDGLAVDLLFVALHGAEGGAKGGGEL-SGADLLDPSFLRGLDEWEVRSLNGVRVAEAILRLVPEPAAFSLTLRALKLWARRRKLYSSVLGFLGGVNLAILAAFVCQKYPLATPATLLLAFFRVYARWPWPSPAHPVLLCPLPPPPHPA-----CAHLSSWTPSPAAGTRPLPPSLMTIVTPTFPAMNSAHNVGLPQLRRLQEELRRAESLTRPWLLDPRHLRRLQGGWRA 418
            LGV+PP+N D P E +  A+  L   L+E G YES+   A R  V+ +L+ +A+AWCE+    A            ++  A   A  +R  + + PP   L +                 FGS RLD H P +D+D++LV PR    RA F    A      H G  G+  V +AYTPV+K R+    VDLLF  L           EL    D++D + L GLDE  +RSLNG RVAE +L LVP+PA F + LRA+K WAR + LYS+VLG LGGVN AILAAFVCQ+YP A P+T++  FFR++  W WP   +PVL+     PP  A      +  ++W P      R     L  IVTP  P MNS++NVG PQLR +++EL +    T       R + +L   WRA
Sbjct:   13 LGVTPPINTDMPAEHDAAASEALVHTLRELGVYESDAGKAVRTGVLDRLRAIADAWCENEWALA------------IAERACDGADCERALAASAPPRCELRT-----------------FGSVRLDVHTPDADIDVVLVAPRHCTRRAFFDTLVAALEGDAHIGAGGVMAVRDAYTPVVKLRVGATDVDLLFAPL--------ACDELPEPLDVMDDAVLEGLDEAAIRSLNGARVAEMLLSLVPDPAVFRVALRAVKRWARCKGLYSNVLGLLGGVNCAILAAFVCQRYPNAAPSTVVGRFFRIFDGWDWP---NPVLIAAPGAPPSSAGDESVASRYAAWNPRLNPRDR---AHLAPIVTPAHPTMNSSYNVGAPQLRAIKDELSKGLETT-------RRVEKLAAHWRA 375          
BLAST of EWM23181.1 vs. NCBI_GenBank
Match: gi|302804859|ref|XP_002984181.1| (hypothetical protein SELMODRAFT_180849, partial [Selaginella moellendorffii] >gi|300148030|gb|EFJ14691.1| hypothetical protein SELMODRAFT_180849, partial [Selaginella moellendorffii])

HSP 1 Score: 237.269 bits (604), Expect = 1.283e-69
Identity = 149/395 (37.72%), Postives = 204/395 (51.65%), Query Frame = 0
Query:    6 STVPPFLGVSPPVNVDPPTEAEREATRHLEAFLKEAGSYESEGMSAARVKVIAKLQRMAEAWCEDLHGKAGSCPAAAPRSDALSRLATQAASNDRDGSTAHPPAASLPSLPSEPRQASHPKPLLLPFGSYRLDCHDPTSDLDLLLVLPRGLASRADFFQDFAGRVLRHHSGVSGLCPVPEAYTPVLKFRMDGLAVDLLFVALHGAEGGAKGGGELSGADLLDPSFLRGLDEWEVRSLNGVRVAEAILRLVPEPAAFSLTLRALKLWARRRKLYSSVLGFLGGVNLAILAAFVCQKYPLATPATLLLAFFRVYARWPWPSPAHPVLLCPLPPPPHPACAHLSSWTP--SPAAGTRPLPPSLMTIVTPTFPAMNSAHNVGLPQLRRLQEELRRAESL 398
            S    +LGV+ P++   PTEA+   TR LE  L EAG YES   +  R +V+ +L ++ + W +++  + G            S   TQ A+                               +  FGSYRL  H P +D+D L V PR ++   DFF  F G +L   S V+ L PVP+A+ PV++F+  G+++DLL+  L                D+   S LR LDE  VRSLNG RV + ILRLVP    F  TLR +KLWAR+R +YS+V GFLGGVN A+L A +CQ YP A P+ L+  FFRVY +W WP+   PV+LC +          LS W P  +P   T  +P     I+TP +P MNS++NV    LR + EE  RA  +
Sbjct:    4 SNGKKYLGVTEPISTAGPTEADFARTRDLEKVLTEAGLYESPEEAVQREEVLGRLDQLVKEWVKNICLRKG-----------YSEQVTQEANAK-----------------------------IFTFGSYRLGVHGPGTDIDTLCVGPRHVSREEDFFGVFHG-MLEAMSEVTELHPVPDAHVPVMRFKFSGISIDLLYAPLAVWTIP-------EDLDISQESILRNLDEPSVRSLNGCRVTDQILRLVPNIEHFRTTLRCMKLWARKRGVYSNVTGFLGGVNWALLVARICQLYPNALPSMLVSRFFRVYTQWRWPN---PVMLCEI----EEGSLGLSVWDPRKNPRDRTHQMP-----IITPAYPCMNSSYNVSSSTLRVMVEEFSRANGI 338          
BLAST of EWM23181.1 vs. NCBI_GenBank
Match: gi|302780986|ref|XP_002972267.1| (hypothetical protein SELMODRAFT_231918 [Selaginella moellendorffii] >gi|300159734|gb|EFJ26353.1| hypothetical protein SELMODRAFT_231918 [Selaginella moellendorffii])

HSP 1 Score: 236.884 bits (603), Expect = 6.889e-69
Identity = 149/395 (37.72%), Postives = 204/395 (51.65%), Query Frame = 0
Query:    6 STVPPFLGVSPPVNVDPPTEAEREATRHLEAFLKEAGSYESEGMSAARVKVIAKLQRMAEAWCEDLHGKAGSCPAAAPRSDALSRLATQAASNDRDGSTAHPPAASLPSLPSEPRQASHPKPLLLPFGSYRLDCHDPTSDLDLLLVLPRGLASRADFFQDFAGRVLRHHSGVSGLCPVPEAYTPVLKFRMDGLAVDLLFVALHGAEGGAKGGGELSGADLLDPSFLRGLDEWEVRSLNGVRVAEAILRLVPEPAAFSLTLRALKLWARRRKLYSSVLGFLGGVNLAILAAFVCQKYPLATPATLLLAFFRVYARWPWPSPAHPVLLCPLPPPPHPACAHLSSWTP--SPAAGTRPLPPSLMTIVTPTFPAMNSAHNVGLPQLRRLQEELRRAESL 398
            S    +LGV+ P++   PTEA+   TR LE  L EAG YES   +  R +V+ +L ++ + W +++  + G            S   TQ A+                               +  FGSYRL  H P +D+D L V PR ++   DFF  F G +L   S V+ L PVP+A+ PV++F+  G+++DLL+  L                D+   S LR LDE  VRSLNG RV + ILRLVP    F  TLR +KLWAR+R +YS+V GFLGGVN A+L A +CQ YP A P+ L+  FFRVY +W WP   +PV+LC +          LS W P  +P   T  +P     I+TP +P MNS++NV    LR + EE  RA  +
Sbjct:    4 SNGKKYLGVTEPISTAGPTEADFARTRDLEKVLTEAGLYESPEEAVQREEVLGRLDQLVKEWVKNICLRKG-----------YSEQLTQEANAK-----------------------------IFTFGSYRLGVHGPGTDIDTLCVGPRHVSREEDFFGVFHG-MLEAMSEVTELHPVPDAHVPVMRFKFSGISIDLLYAPLAVWTIPED-------LDISQESILRNLDEPSVRSLNGCRVTDQILRLVPNIEHFRTTLRCMKLWARKRGVYSNVTGFLGGVNWALLVARICQLYPNALPSMLVSRFFRVYTQWRWP---NPVMLCEI----EEGSLGLSVWDPRKNPRDRTHQMP-----IITPAYPCMNSSYNVSSSTLRVMVEEFSRANGI 338          
BLAST of EWM23181.1 vs. NCBI_GenBank
Match: gi|508779688|gb|EOY26944.1| (Nucleic acid binding protein, putative isoform 1 [Theobroma cacao])

HSP 1 Score: 237.269 bits (604), Expect = 6.540e-68
Identity = 150/407 (36.86%), Postives = 207/407 (50.86%), Query Frame = 0
Query:    4 PPSTVP-PFLGVSPPVNVDPPTEAEREATRHLEAFLKEAGSYESEGMSAARVKVIAKLQRMAEAWCEDLHGKAGSCPAAAPRSDALSRLATQAASNDRDGSTAHPPAASLPSLPSEPRQASHPKPLLLPFGSYRLDCHDPTSDLDLLLVLPRGLASRADFFQDFAGRVLRHHSGVSGLCPVPEAYTPVLKFRMDGLAVDLLFVALHGAEGGAKGGGEL----SGADLLDPSFLRGLDEWEVRSLNGVRVAEAILRLVPEPAAFSLTLRALKLWARRRKLYSSVLGFLGGVNLAILAAFVCQKYPLATPATLLLAFFRVYARWPWPSPAHPVLLCPLPPPPHPACAHLSSWTPSPAAGTRPLPPSLMTIVTPTFPAMNSAHNVGLPQLRRLQEELRRAESLTRPWLLD 405
            PP  VP    GV+ P+++  PTEA+ + +R LE FL EAG Y+SE  +A R +V+ ++Q +   W +                  L+RL          G T               +     K ++L FGSYRL  H P SD+D L V P  +    DFF      +L     V+ L PVP+A+ PV+KF+ DG+++DLL+ ++            L       D+ D S L  +DE  VRSLNG RVA+ IL+LVP    F  TLR LK WA+RR +YS+V GFLGGVN A+L A VCQ YP A P  L+  FFRV+ +W WP   +PV+LC +           S W P      R     LM I+TP +P MNS++NV    LR + E+L+   ++     L+
Sbjct:   12 PPVAVPVEQYGVTKPISMAGPTEADIQRSRELEKFLVEAGLYDSEEETAKREEVLGRIQDIVTDWVK-----------------QLTRLR---------GYTG--------------QMVEDAKAVILTFGSYRLGVHGPGSDVDTLCVGPSYVNREEDFFF-VLHNILAEREEVTELQPVPDAHVPVMKFKFDGISIDLLYASI-----------SLLVVPQDLDISDVSVLYNVDEPTVRSLNGCRVADQILKLVPNAEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPIMLVSRFFRVFTQWRWP---NPVMLCAIEEDE----LGFSVWDPRKNPRDR---THLMPIITPAYPCMNSSYNVSASTLRVMTEQLKYGNNICEEIQLN 356          
BLAST of EWM23181.1 vs. NCBI_GenBank
Match: gi|508779690|gb|EOY26946.1| (Nucleic acid binding protein, putative isoform 3 [Theobroma cacao])

HSP 1 Score: 237.654 bits (605), Expect = 6.574e-68
Identity = 150/407 (36.86%), Postives = 207/407 (50.86%), Query Frame = 0
Query:    4 PPSTVP-PFLGVSPPVNVDPPTEAEREATRHLEAFLKEAGSYESEGMSAARVKVIAKLQRMAEAWCEDLHGKAGSCPAAAPRSDALSRLATQAASNDRDGSTAHPPAASLPSLPSEPRQASHPKPLLLPFGSYRLDCHDPTSDLDLLLVLPRGLASRADFFQDFAGRVLRHHSGVSGLCPVPEAYTPVLKFRMDGLAVDLLFVALHGAEGGAKGGGEL----SGADLLDPSFLRGLDEWEVRSLNGVRVAEAILRLVPEPAAFSLTLRALKLWARRRKLYSSVLGFLGGVNLAILAAFVCQKYPLATPATLLLAFFRVYARWPWPSPAHPVLLCPLPPPPHPACAHLSSWTPSPAAGTRPLPPSLMTIVTPTFPAMNSAHNVGLPQLRRLQEELRRAESLTRPWLLD 405
            PP  VP    GV+ P+++  PTEA+ + +R LE FL EAG Y+SE  +A R +V+ ++Q +   W +                  L+RL          G T               +     K ++L FGSYRL  H P SD+D L V P  +    DFF      +L     V+ L PVP+A+ PV+KF+ DG+++DLL+ ++            L       D+ D S L  +DE  VRSLNG RVA+ IL+LVP    F  TLR LK WA+RR +YS+V GFLGGVN A+L A VCQ YP A P  L+  FFRV+ +W WP   +PV+LC +           S W P      R     LM I+TP +P MNS++NV    LR + E+L+   ++     L+
Sbjct:   12 PPVAVPVEQYGVTKPISMAGPTEADIQRSRELEKFLVEAGLYDSEEETAKREEVLGRIQDIVTDWVK-----------------QLTRLR---------GYTG--------------QMVEDAKAVILTFGSYRLGVHGPGSDVDTLCVGPSYVNREEDFFF-VLHNILAEREEVTELQPVPDAHVPVMKFKFDGISIDLLYASI-----------SLLVVPQDLDISDVSVLYNVDEPTVRSLNGCRVADQILKLVPNAEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPIMLVSRFFRVFTQWRWP---NPVMLCAIEEDE----LGFSVWDPRKNPRDR---THLMPIITPAYPCMNSSYNVSASTLRVMTEQLKYGNNICEEIQLN 356          
BLAST of EWM23181.1 vs. NCBI_GenBank
Match: gi|508779689|gb|EOY26945.1| (Nucleic acid binding protein, putative isoform 2 [Theobroma cacao])

HSP 1 Score: 237.654 bits (605), Expect = 6.623e-68
Identity = 150/407 (36.86%), Postives = 207/407 (50.86%), Query Frame = 0
Query:    4 PPSTVP-PFLGVSPPVNVDPPTEAEREATRHLEAFLKEAGSYESEGMSAARVKVIAKLQRMAEAWCEDLHGKAGSCPAAAPRSDALSRLATQAASNDRDGSTAHPPAASLPSLPSEPRQASHPKPLLLPFGSYRLDCHDPTSDLDLLLVLPRGLASRADFFQDFAGRVLRHHSGVSGLCPVPEAYTPVLKFRMDGLAVDLLFVALHGAEGGAKGGGEL----SGADLLDPSFLRGLDEWEVRSLNGVRVAEAILRLVPEPAAFSLTLRALKLWARRRKLYSSVLGFLGGVNLAILAAFVCQKYPLATPATLLLAFFRVYARWPWPSPAHPVLLCPLPPPPHPACAHLSSWTPSPAAGTRPLPPSLMTIVTPTFPAMNSAHNVGLPQLRRLQEELRRAESLTRPWLLD 405
            PP  VP    GV+ P+++  PTEA+ + +R LE FL EAG Y+SE  +A R +V+ ++Q +   W +                  L+RL          G T               +     K ++L FGSYRL  H P SD+D L V P  +    DFF      +L     V+ L PVP+A+ PV+KF+ DG+++DLL+ ++            L       D+ D S L  +DE  VRSLNG RVA+ IL+LVP    F  TLR LK WA+RR +YS+V GFLGGVN A+L A VCQ YP A P  L+  FFRV+ +W WP   +PV+LC +           S W P      R     LM I+TP +P MNS++NV    LR + E+L+   ++     L+
Sbjct:   12 PPVAVPVEQYGVTKPISMAGPTEADIQRSRELEKFLVEAGLYDSEEETAKREEVLGRIQDIVTDWVK-----------------QLTRLR---------GYTG--------------QMVEDAKAVILTFGSYRLGVHGPGSDVDTLCVGPSYVNREEDFFF-VLHNILAEREEVTELQPVPDAHVPVMKFKFDGISIDLLYASI-----------SLLVVPQDLDISDVSVLYNVDEPTVRSLNGCRVADQILKLVPNAEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARVCQLYPNAVPIMLVSRFFRVFTQWRWP---NPVMLCAIEEDE----LGFSVWDPRKNPRDR---THLMPIITPAYPCMNSSYNVSASTLRVMTEQLKYGNNICEEIQLN 356          
BLAST of EWM23181.1 vs. NCBI_GenBank
Match: gi|1021566618|ref|XP_016174556.1| (nuclear poly(A) polymerase 4 isoform X1 [Arachis ipaensis])

HSP 1 Score: 236.498 bits (602), Expect = 1.749e-67
Identity = 140/389 (35.99%), Postives = 206/389 (52.96%), Query Frame = 0
Query:   13 GVSPPVNVDPPTEAEREATRHLEAFLKEAGSYESEGMSAARVKVIAKLQRMAEAWCEDLHGKAGSCPAAAPRSDALSRLATQAASNDRDGSTAHPPAASLPSLPSEPRQASHPKPLLLPFGSYRLDCHDPTSDLDLLLVLPRGLASRADFFQDFA-GRVLRHHSGVSGLCPVPEAYTPVLKFRMDGLAVDLLFVALHGAEGGAKGGGELSGADLLDPSFLRGLDEWEVRSLNGVRVAEAILRLVPEPAAFSLTLRALKLWARRRKLYSSVLGFLGGVNLAILAAFVCQKYPLATPATLLLAFFRVYARWPWPSPAHPVLLCPLPPPPHPACAHLSSWTP--SPAAGTRPLPPSLMTIVTPTFPAMNSAHNVGLPQLRRLQEELRRAESL 398
            GV+ P++   PT A+ + T+ LE FL ++G YESE  +A RV+V+ +L ++ ++W + L  + G        ++A+                                        +  FGSYRL  H P +DLD L + P  +    DFF  FA   +L +   ++ L P+P+A+ PV+KF+ DG+++DLL+ ++                D+ D S L+ +DE  VRSLNG RVA+ IL+LVP    F  TLR LK WA+RR +YS+V GFLGGVNLA+L A VCQ YP A P+ L+  FFRVY +W WP   +PV+LCP+           S W P  +P   T  +P     I+TP +P MNS++NV    LR + E+ + +  +
Sbjct:   15 GVTKPISKAGPTVADIQRTKELEKFLVDSGLYESEEEAAKRVEVLHRLGQVLKSWVKMLTRRRGYTDQMVEDANAV----------------------------------------IFTFGSYRLGVHGPGADLDTLCIGPSYVNREEDFF--FALHDILANMEEITELQPIPDAHVPVMKFKFDGISIDLLYASISCLV-------VRDDLDIADVSILQNIDEPTVRSLNGCRVADQILKLVPNVENFRTTLRCLKFWAKRRGVYSNVTGFLGGVNLALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWP---NPVMLCPIEENE----LGFSVWDPRKNPRDRTHHMP-----IITPAYPCMNSSYNVSTSTLRVMMEQFQYSNKI 342          
BLAST of EWM23181.1 vs. NCBI_GenBank
Match: gi|673052403|ref|XP_008880162.1| (hypothetical protein, variant [Aphanomyces invadans] >gi|574464275|gb|ETV91325.1| hypothetical protein, variant [Aphanomyces invadans])

HSP 1 Score: 228.794 bits (582), Expect = 2.789e-67
Identity = 152/388 (39.18%), Postives = 201/388 (51.80%), Query Frame = 0
Query:   13 GVSPPVNVDPPTEAEREATRHLEAFLKEAGSYESEGMSAARVKVIAKLQRMAEAWCEDLHGKAGSCPAAAPRSDALSRLATQAASNDRDGSTAHPPAASLPSLPSEPRQASHPKPLLLPFGSYRLDCHDPTSDLDLLLVLPRGLASRADFFQDFAGRVLRHHSGVSGLCPVPEAYTPVLKFRMDGLAVDLLFVALHGAEGGAKGGGELSGADLLDPSFLRGLDEWEVRSLNGVRVAEAILRLVPEPAAFSLTLRALKLWARRRKLYSSVLGFLGGVNLAILAAFVCQKYPLATPATLLLAFFRVYARWPWPSPAHPVLLCPLPPP--PHPACAHLSSWTPSPAAGTRPLPPSLMTIVTPTFPAMNSAHNVGLPQLRRLQEELRRAESL 398
            G++PP+++  PT  + + T  L   L++   YES   S  R   +  +    E W ++   K G    A     +L+++ T                                      FGSYRL  H P +D+D L + PR   SR  FF  F   +L+H + V+ +  +P+AY PV+KF++ G+A+DLLFVAL  A             DLLDP  LR +DE  VRSLNG RVAE IL+LVP    F LTL A+K WAR R +YS+VLGFLGGVN AIL A VCQ YP +   TLL  FFRVY +W WP+   P+LL  +      H    HL SW P      R     LM I+TP FPAMNS++NV    LR +Q E R+A ++
Sbjct:    9 GITPPISLAGPTSTDHQLTSSLTDTLRQWNLYESAEGSLRRENALELVGAWVEQWAQNEATKRGLVVDAT----SLTQIRT--------------------------------------FGSYRLGVHSPEADIDTLCLAPRH-CSRLGFFTSFP-LLLKHQAQVTSVHSIPDAYVPVIKFQVLGVAIDLLFVALDVASVP-------EDIDLLDPKTLRDVDEPGVRSLNGCRVAEMILQLVPNLDQFRLTLVAVKHWARMRGIYSNVLGFLGGVNWAILVARVCQLYPQSLAGTLLTKFFRVYHQWIWPN---PILLNNIMDDDGKHAELHHLQSWNPKLYPRDR---LHLMPIITPAFPAMNSSYNVLDCTLRLMQAEFRQAATV 339          
BLAST of EWM23181.1 vs. NCBI_GenBank
Match: gi|1012230976|ref|XP_015938371.1| (nuclear poly(A) polymerase 4 isoform X1 [Arachis duranensis])

HSP 1 Score: 235.343 bits (599), Expect = 4.477e-67
Identity = 138/388 (35.57%), Postives = 204/388 (52.58%), Query Frame = 0
Query:   13 GVSPPVNVDPPTEAEREATRHLEAFLKEAGSYESEGMSAARVKVIAKLQRMAEAWCEDLHGKAGSCPAAAPRSDALSRLATQAASNDRDGSTAHPPAASLPSLPSEPRQASHPKPLLLPFGSYRLDCHDPTSDLDLLLVLPRGLASRADFFQDFAGRVLRHHSGVSGLCPVPEAYTPVLKFRMDGLAVDLLFVALHGAEGGAKGGGELSGADLLDPSFLRGLDEWEVRSLNGVRVAEAILRLVPEPAAFSLTLRALKLWARRRKLYSSVLGFLGGVNLAILAAFVCQKYPLATPATLLLAFFRVYARWPWPSPAHPVLLCPLPPPPHPACAHLSSWTP--SPAAGTRPLPPSLMTIVTPTFPAMNSAHNVGLPQLRRLQEELRRAESL 398
            GV+ P++   PT A+ + T+ LE FL ++G YESE  +A RV+V+ +L ++ ++W + L  + G        ++A+                                        +  FGSYRL  H P +DLD L + P  +    DFF      +L +   ++ L P+P+A+ PV+KF+ DG+++DLL+ ++                D+ D S L+ +DE  VRSLNG RVA+ IL+LVP    F  TLR LK WA+RR +YS+V GFLGGVNLA+L A VCQ YP A P+ L+  FFRVY +W WP   +PV+LCP+           S W P  +P   T  +P     I+TP +P MNS++NV    LR + E+ + +  +
Sbjct:   15 GVTKPISKAGPTVADIQRTKELEKFLVDSGLYESEEEAAKRVEVLHRLGQVLKSWVKMLTRRRGYTDQMVEDANAV----------------------------------------IFTFGSYRLGVHGPGADLDTLCIGPSYVNREEDFFFVLHD-ILANMEEITELQPIPDAHVPVMKFKFDGISIDLLYASISCLV-------VRDDLDIADVSILQNIDEPTVRSLNGCRVADQILKLVPNVQNFRTTLRCLKFWAKRRGVYSNVTGFLGGVNLALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWP---NPVMLCPIEENE----LGFSVWDPRKNPRDRTHHMP-----IITPAYPCMNSSYNVSTSTLRVMMEQFQYSNKI 342          
The following BLAST results are available for this feature:
BLAST of EWM23181.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585104064|gb|EWM23181.1|0.000e+0100.00poly polymerase-like protein, partial [Nannochloro... [more]
gi|676388201|ref|XP_009037379.1|1.252e-7639.71hypothetical protein AURANDRAFT_27130, partial [Au... [more]
gi|302804859|ref|XP_002984181.1|1.283e-6937.72hypothetical protein SELMODRAFT_180849, partial [S... [more]
gi|302780986|ref|XP_002972267.1|6.889e-6937.72hypothetical protein SELMODRAFT_231918 [Selaginell... [more]
gi|508779688|gb|EOY26944.1|6.540e-6836.86Nucleic acid binding protein, putative isoform 1 [... [more]
gi|508779690|gb|EOY26946.1|6.574e-6836.86Nucleic acid binding protein, putative isoform 3 [... [more]
gi|508779689|gb|EOY26945.1|6.623e-6836.86Nucleic acid binding protein, putative isoform 2 [... [more]
gi|1021566618|ref|XP_016174556.1|1.749e-6735.99nuclear poly(A) polymerase 4 isoform X1 [Arachis i... [more]
gi|673052403|ref|XP_008880162.1|2.789e-6739.18hypothetical protein, variant [Aphanomyces invadan... [more]
gi|1012230976|ref|XP_015938371.1|4.477e-6735.57nuclear poly(A) polymerase 4 isoform X1 [Arachis d... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7510rna7510Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications