EWM23186.1, cds7486 (CDS) Nannochloropsis gaditana

Overview
NameEWM23186.1
Unique Namecds7486
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002472.1:110795..110917 -
Alignment locationCM002472.1:110474..110701 -
Alignment locationCM002472.1:110192..110353 -
Alignment locationCM002472.1:109623..110036 -
Alignment locationCM002472.1:109080..109094 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM23186.1
ProductAcyl transferase/acyl hydrolase/lysophospholipase
Orig transcript idgnl|cribi|Naga_100343g4.7640.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002472.1supercontigCM002472.1:110795..110917 -
CM002472.1supercontigCM002472.1:110474..110701 -
CM002472.1supercontigCM002472.1:110192..110353 -
CM002472.1supercontigCM002472.1:109623..110036 -
CM002472.1supercontigCM002472.1:109080..109094 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0006629lipid metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR016035Acyl_Trfase/lysoPLipase
IPR002641Patatin/PLipase_A2-rel
Homology
BLAST of EWM23186.1 vs. NCBI_GenBank
Match: gi|585104074|gb|EWM23186.1| (Acyl transferase/acyl hydrolase/lysophospholipase [Nannochloropsis gaditana])

HSP 1 Score: 637.876 bits (1644), Expect = 0.000e+0
Identity = 313/313 (100.00%), Postives = 313/313 (100.00%), Query Frame = 0
Query:    1 MHARLTPTQTESHSMKGDGAPNSRIRGWHQQRRRRITMMGQVFVGLCLGAVGAETTYPCRGSRSSYSFCACSAAFIPSHYEGCGSLSWEWERKGRHHQTTRYGHIKRAESFPEGGEQLRHLSPLFAPPRPGTQGLWALRRRTSEQEEADVDSENRRRKSVPVTSLEQLHQVLSPEGGLRLRDLDVRGDSTAALLSSSFPPSPSPSSSPSFHPVAAAIHARIASRSTPGARTDGLKIGLSLEGGGMRGCVGAGMLAALNHLGLRDAFDVVYGSSAGSLMGAYFLSGQTPLEGPGIYYDILSQAGRKFIDQAPIP 313
            MHARLTPTQTESHSMKGDGAPNSRIRGWHQQRRRRITMMGQVFVGLCLGAVGAETTYPCRGSRSSYSFCACSAAFIPSHYEGCGSLSWEWERKGRHHQTTRYGHIKRAESFPEGGEQLRHLSPLFAPPRPGTQGLWALRRRTSEQEEADVDSENRRRKSVPVTSLEQLHQVLSPEGGLRLRDLDVRGDSTAALLSSSFPPSPSPSSSPSFHPVAAAIHARIASRSTPGARTDGLKIGLSLEGGGMRGCVGAGMLAALNHLGLRDAFDVVYGSSAGSLMGAYFLSGQTPLEGPGIYYDILSQAGRKFIDQAPIP
Sbjct:    1 MHARLTPTQTESHSMKGDGAPNSRIRGWHQQRRRRITMMGQVFVGLCLGAVGAETTYPCRGSRSSYSFCACSAAFIPSHYEGCGSLSWEWERKGRHHQTTRYGHIKRAESFPEGGEQLRHLSPLFAPPRPGTQGLWALRRRTSEQEEADVDSENRRRKSVPVTSLEQLHQVLSPEGGLRLRDLDVRGDSTAALLSSSFPPSPSPSSSPSFHPVAAAIHARIASRSTPGARTDGLKIGLSLEGGGMRGCVGAGMLAALNHLGLRDAFDVVYGSSAGSLMGAYFLSGQTPLEGPGIYYDILSQAGRKFIDQAPIP 313          
BLAST of EWM23186.1 vs. NCBI_GenBank
Match: gi|551597250|ref|XP_005780750.1| (hypothetical protein EMIHUDRAFT_463071 [Emiliania huxleyi CCMP1516] >gi|485633450|gb|EOD28321.1| hypothetical protein EMIHUDRAFT_463071 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 140.198 bits (352), Expect = 2.498e-34
Identity = 83/172 (48.26%), Postives = 105/172 (61.05%), Query Frame = 0
Query:  137 ALRRRTSEQEEADVDSENRRRKSVPVTSLEQLHQVLSPEGGLRLRDLDVRGDSTAALLSSSFPPSPSPSSSPSFHPVAAAIHARIASRSTPGARTDGLKIGLSLEGGGMRGCVGAGMLAALNHLGLRDAFDVVYGSSAGSLMGAYFLSGQTPLEGPGIYYDILSQAGRKFID 308
            ++RR T   E A        R+ + V S     ++L+   G +   LDVRG+S+A                   HPVA A+ AR A  S PGARTDG+KI L++EGGGMRGCV AGM+AA++HLGL D+ D VYGSSAGSL+GAY LS Q P  G  IYY+ L +AGR+FID
Sbjct:   25 SVRRETRHVERA---RPGNSRQRLAVESQSSFRELLA--AGAKYSQLDVRGNSSAL--------------EQRLHPVAEAMQARRAVGSRPGARTDGIKIALAVEGGGMRGCVAAGMVAAIHHLGLTDSLDAVYGSSAGSLIGAYLLSRQDPRYGCSIYYEELPKAGRRFID 177          
BLAST of EWM23186.1 vs. NCBI_GenBank
Match: gi|873240096|emb|CEL93788.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 139.813 bits (351), Expect = 1.573e-33
Identity = 77/171 (45.03%), Postives = 106/171 (61.99%), Query Frame = 0
Query:  145 QEEADVDSENRRRKSVPVTSLEQLHQVLSPEGGLRLRDLDVRGDSTAALLSSSFPPSPSPSSSPS-----FHPVAAAIHARIASRSTPGARTDGLKIGLSLEGGGMRGCVGAGMLAALNHLGLRDAFDVVYGSSAGSLMGAYFLSGQTPLEGPGIYYDILSQAGRKFIDQA 310
            Q+   VD  + RR  +PV ++E+LH+ L  + G++L  LD+RG +    L    P      +S        HPV   ++ R    S PG RTDG ++ L++EGGGMRGC+GAGM+ AL  L L D FDV+YGSSAG+L+GAYF++GQ P EG  +YYD L  AG+ FI+ A
Sbjct:   68 QKGFTVDKGHARR--LPVRTVEELHRYL--DRGIKLPHLDIRGQTHLLPLPDKNPIINQADASAEVNCTGLHPVLQVLYKRRLEGSRPGQRTDGHQVALAIEGGGMRGCLGAGMVCALKQLNLTDCFDVIYGSSAGALVGAYFITGQVPYEGGQVYYDWLPAAGKDFINTA 234          
BLAST of EWM23186.1 vs. NCBI_GenBank
Match: gi|219118301|ref|XP_002179928.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217408981|gb|EEC48914.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 123.25 bits (308), Expect = 7.689e-28
Identity = 62/130 (47.69%), Postives = 80/130 (61.54%), Query Frame = 0
Query:  180 LRDLDVRGDSTAALLSSSFPPSPSPSSSPSFHPVAAAIHARIASRSTPGARTDGLKIGLSLEGGGMRGCVGAGMLAALNHLGLRDAFDVVYGSSAGSLMGAYFLSGQTPLEGPGIYYDILSQAGRKFIDQ 309
            +R L+V GD+              PS     HPVA  +H R    +  G   DG K+ L++EGGGMRGCV AGM+ AL+HL L   FDV+YGSSAGS+  AYF++GQ P  GP +YYD L+ AG+ FID+
Sbjct:  147 IRSLNVSGDTQII---------GDPSRPEYVHPVAQLVHERQRRGTALGQHKDGCKLALAVEGGGMRGCVTAGMICALHHLNLTSVFDVIYGSSAGSITSAYFITGQLPWFGPEVYYDQLTTAGKNFIDR 267          
BLAST of EWM23186.1 vs. NCBI_GenBank
Match: gi|1072223558|gb|OEU08313.1| (hypothetical protein FRACYDRAFT_229252 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 121.709 bits (304), Expect = 1.873e-27
Identity = 54/106 (50.94%), Postives = 74/106 (69.81%), Query Frame = 0
Query:  203 SPSSSPSFHPVAAAIHARIASRSTPGARTDGLKIGLSLEGGGMRGCVGAGMLAALNHLGLRDAFDVVYGSSAGSLMGAYFLSGQTPLEGPGIYYDILSQAGRKFID 308
            SP      HPV   ++ R  ++ +  A+ +G KI L +EGGGMRGCV  GM+ A+++LGLRD  D+VYGSSAGS++GAYF++GQ P  GP +YYD L+  G+ FID
Sbjct:   76 SPDHPDIIHPVVRVLYDRKRNQESGAAKDEGQKIALVIEGGGMRGCVTGGMVCAIDYLGLRDCVDIVYGSSAGSIIGAYFITGQLPWFGPELYYDQLTTVGKSFID 181          
BLAST of EWM23186.1 vs. NCBI_GenBank
Match: gi|1189386900|gb|OSX73989.1| (hypothetical protein BU14_0316s0017 [Porphyra umbilicalis])

HSP 1 Score: 120.939 bits (302), Expect = 1.013e-26
Identity = 60/100 (60.00%), Postives = 73/100 (73.00%), Query Frame = 0
Query:  210 FHPVAAAIHARIASRSTPGARTDGLKIGLSLEGGGMRGCVGAGMLAALNHLGLRDAFDVVYGSSAGSLMGAYFLSGQTPLEGPGIYYDILSQAGRKFIDQ 309
             HPV A + AR A  S PG R D  K+GL++EGGGMRG + AGM+AAL +LGL+DA DVVYGSSAGS++GAYF+SGQ PL G  IYYD  S    +FI +
Sbjct:  391 LHPVLAVLQARTACGSKPGKRADDFKVGLAIEGGGMRGVLSAGMVAALKYLGLQDAIDVVYGSSAGSIIGAYFVSGQGPLYGASIYYD--SICSDRFISK 488          
BLAST of EWM23186.1 vs. NCBI_GenBank
Match: gi|546318871|ref|XP_005716868.1| (unnamed protein product [Chondrus crispus] >gi|507113419|emb|CDF37049.1| unnamed protein product [Chondrus crispus])

HSP 1 Score: 115.161 bits (287), Expect = 3.352e-25
Identity = 56/107 (52.34%), Postives = 74/107 (69.16%), Query Frame = 0
Query:  205 SSSPSFHPVAAAIHARIASRSTPGARTDGLKIGLSLEGGGMRGCVGAGMLAALNHLGLRDAFDVVYGSSAGSLMGAYFLSGQTPLEGPGIYYDILS---QAGRKFID 308
            SS+   HPV   +  R+   S PG R D  K+ L +EGGGMRG V AGM+AA+ + GL +AFDVVYGSSAG+++GAYF+S Q P+ G  IYYDI+    + G++FID
Sbjct:   40 SSTEPLHPVLDILKRRLERPSKPGQRKDDRKVALCIEGGGMRGAVSAGMVAAIKYCGLENAFDVVYGSSAGAIVGAYFVSRQLPVYGAQIYYDIICSIPENGQRFID 146          
BLAST of EWM23186.1 vs. NCBI_GenBank
Match: gi|545710364|ref|XP_005707490.1| (hypothetical protein Gasu_17340 [Galdieria sulphuraria] >gi|452823964|gb|EME30970.1| hypothetical protein Gasu_17340 [Galdieria sulphuraria])

HSP 1 Score: 112.079 bits (279), Expect = 5.436e-24
Identity = 53/103 (51.46%), Postives = 68/103 (66.02%), Query Frame = 0
Query:  205 SSSPSFHPVAAAIHARIASRSTPGARTDGLKIGLSLEGGGMRGCVGAGMLAALNHLGLRDAFDVVYGSSAGSLMGAYFLSGQTPLEGPGIYYDILSQAGRKFI 307
            S+S S HPV + I  R    S PG R D  ++ L +EGGGMRG + AGM AA+ +L L + FDVVYGSSAG+++GAYF+S Q PL G  +YY+ L    R FI
Sbjct:  121 SNSTSVHPVLSIIQKRKLEASLPGKRNDSFRVALCIEGGGMRGSIAAGMTAAIKYLNLENVFDVVYGSSAGAIIGAYFVSRQLPLYGTSVYYEDL--CSRDFI 221          
BLAST of EWM23186.1 vs. NCBI_GenBank
Match: gi|223995323|ref|XP_002287345.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220976461|gb|EED94788.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 112.079 bits (279), Expect = 6.649e-24
Identity = 54/129 (41.86%), Postives = 75/129 (58.14%), Query Frame = 0
Query:  203 SPSSSPSFHPVAAAIHAR---------------IASRSTPGART--------DGLKIGLSLEGGGMRGCVGAGMLAALNHLGLRDAFDVVYGSSAGSLMGAYFLSGQTPLEGPGIYYDILSQAGRKFID 308
            SP    + HPV   +H R               + ++    +R         DG ++ L++EGGGMRGCV AGM+ A++HLGL D  DVVYGSSAG+++GAYF++ Q P  GP +YYD L+ AG  FI+
Sbjct:  181 SPDHKDAIHPVVKLVHERRRQIEKIKSATKNNDVTTQINDNSRNIHRTMPPEDGFRVALAVEGGGMRGCVTAGMVTAIHHLGLEDTIDVVYGSSAGTVIGAYFITRQLPWYGPEVYYDALTTAGDTFIN 309          
BLAST of EWM23186.1 vs. NCBI_GenBank
Match: gi|551666742|ref|XP_005836132.1| (hypothetical protein GUITHDRAFT_93499 [Guillardia theta CCMP2712] >gi|428180284|gb|EKX49152.1| hypothetical protein GUITHDRAFT_93499 [Guillardia theta CCMP2712])

HSP 1 Score: 108.612 bits (270), Expect = 3.633e-23
Identity = 54/108 (50.00%), Postives = 71/108 (65.74%), Query Frame = 0
Query:  209 SFHPVAAAIHARIASRSTPGARTDGLKIGLSLEGGGMRGCVGAGMLAALNHLGLRDAFDVVYGSSAGSLMGAYFLSGQ--TPLEGPGIYYDILS--QAGRKFIDQAPI 312
            + HPV   +  R    S PG R+DG K+ L++EGGGMRGCV AGM AA+   G  D FD VYGSSAGSL+GAY+++ Q   P  G  +YYD+L+  +A   FID++ I
Sbjct:   28 TIHPVLQVLMQRRRESSKPGQRSDGFKVALAIEGGGMRGCVAAGMAAAVKDAGFHDCFDAVYGSSAGSLIGAYWIANQFGMPQYGCSLYYDLLTDERAKENFIDRSQI 135          
The following BLAST results are available for this feature:
BLAST of EWM23186.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585104074|gb|EWM23186.1|0.000e+0100.00Acyl transferase/acyl hydrolase/lysophospholipase ... [more]
gi|551597250|ref|XP_005780750.1|2.498e-3448.26hypothetical protein EMIHUDRAFT_463071 [Emiliania ... [more]
gi|873240096|emb|CEL93788.1|1.573e-3345.03unnamed protein product [Vitrella brassicaformis C... [more]
gi|219118301|ref|XP_002179928.1|7.689e-2847.69predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|1072223558|gb|OEU08313.1|1.873e-2750.94hypothetical protein FRACYDRAFT_229252 [Fragilario... [more]
gi|1189386900|gb|OSX73989.1|1.013e-2660.00hypothetical protein BU14_0316s0017 [Porphyra umbi... [more]
gi|546318871|ref|XP_005716868.1|3.352e-2552.34unnamed protein product [Chondrus crispus] >gi|507... [more]
gi|545710364|ref|XP_005707490.1|5.436e-2451.46hypothetical protein Gasu_17340 [Galdieria sulphur... [more]
gi|223995323|ref|XP_002287345.1|6.649e-2441.86predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|551666742|ref|XP_005836132.1|3.633e-2350.00hypothetical protein GUITHDRAFT_93499 [Guillardia ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7504rna7504Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications