EWM23186.1, cds7486 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23186.1 vs. NCBI_GenBank
Match: gi|585104074|gb|EWM23186.1| (Acyl transferase/acyl hydrolase/lysophospholipase [Nannochloropsis gaditana]) HSP 1 Score: 637.876 bits (1644), Expect = 0.000e+0 Identity = 313/313 (100.00%), Postives = 313/313 (100.00%), Query Frame = 0
Query: 1 MHARLTPTQTESHSMKGDGAPNSRIRGWHQQRRRRITMMGQVFVGLCLGAVGAETTYPCRGSRSSYSFCACSAAFIPSHYEGCGSLSWEWERKGRHHQTTRYGHIKRAESFPEGGEQLRHLSPLFAPPRPGTQGLWALRRRTSEQEEADVDSENRRRKSVPVTSLEQLHQVLSPEGGLRLRDLDVRGDSTAALLSSSFPPSPSPSSSPSFHPVAAAIHARIASRSTPGARTDGLKIGLSLEGGGMRGCVGAGMLAALNHLGLRDAFDVVYGSSAGSLMGAYFLSGQTPLEGPGIYYDILSQAGRKFIDQAPIP 313
MHARLTPTQTESHSMKGDGAPNSRIRGWHQQRRRRITMMGQVFVGLCLGAVGAETTYPCRGSRSSYSFCACSAAFIPSHYEGCGSLSWEWERKGRHHQTTRYGHIKRAESFPEGGEQLRHLSPLFAPPRPGTQGLWALRRRTSEQEEADVDSENRRRKSVPVTSLEQLHQVLSPEGGLRLRDLDVRGDSTAALLSSSFPPSPSPSSSPSFHPVAAAIHARIASRSTPGARTDGLKIGLSLEGGGMRGCVGAGMLAALNHLGLRDAFDVVYGSSAGSLMGAYFLSGQTPLEGPGIYYDILSQAGRKFIDQAPIP
Sbjct: 1 MHARLTPTQTESHSMKGDGAPNSRIRGWHQQRRRRITMMGQVFVGLCLGAVGAETTYPCRGSRSSYSFCACSAAFIPSHYEGCGSLSWEWERKGRHHQTTRYGHIKRAESFPEGGEQLRHLSPLFAPPRPGTQGLWALRRRTSEQEEADVDSENRRRKSVPVTSLEQLHQVLSPEGGLRLRDLDVRGDSTAALLSSSFPPSPSPSSSPSFHPVAAAIHARIASRSTPGARTDGLKIGLSLEGGGMRGCVGAGMLAALNHLGLRDAFDVVYGSSAGSLMGAYFLSGQTPLEGPGIYYDILSQAGRKFIDQAPIP 313
BLAST of EWM23186.1 vs. NCBI_GenBank
Match: gi|551597250|ref|XP_005780750.1| (hypothetical protein EMIHUDRAFT_463071 [Emiliania huxleyi CCMP1516] >gi|485633450|gb|EOD28321.1| hypothetical protein EMIHUDRAFT_463071 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 140.198 bits (352), Expect = 2.498e-34 Identity = 83/172 (48.26%), Postives = 105/172 (61.05%), Query Frame = 0
Query: 137 ALRRRTSEQEEADVDSENRRRKSVPVTSLEQLHQVLSPEGGLRLRDLDVRGDSTAALLSSSFPPSPSPSSSPSFHPVAAAIHARIASRSTPGARTDGLKIGLSLEGGGMRGCVGAGMLAALNHLGLRDAFDVVYGSSAGSLMGAYFLSGQTPLEGPGIYYDILSQAGRKFID 308
++RR T E A R+ + V S ++L+ G + LDVRG+S+A HPVA A+ AR A S PGARTDG+KI L++EGGGMRGCV AGM+AA++HLGL D+ D VYGSSAGSL+GAY LS Q P G IYY+ L +AGR+FID
Sbjct: 25 SVRRETRHVERA---RPGNSRQRLAVESQSSFRELLA--AGAKYSQLDVRGNSSAL--------------EQRLHPVAEAMQARRAVGSRPGARTDGIKIALAVEGGGMRGCVAAGMVAAIHHLGLTDSLDAVYGSSAGSLIGAYLLSRQDPRYGCSIYYEELPKAGRRFID 177
BLAST of EWM23186.1 vs. NCBI_GenBank
Match: gi|873240096|emb|CEL93788.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 139.813 bits (351), Expect = 1.573e-33 Identity = 77/171 (45.03%), Postives = 106/171 (61.99%), Query Frame = 0
Query: 145 QEEADVDSENRRRKSVPVTSLEQLHQVLSPEGGLRLRDLDVRGDSTAALLSSSFPPSPSPSSSPS-----FHPVAAAIHARIASRSTPGARTDGLKIGLSLEGGGMRGCVGAGMLAALNHLGLRDAFDVVYGSSAGSLMGAYFLSGQTPLEGPGIYYDILSQAGRKFIDQA 310
Q+ VD + RR +PV ++E+LH+ L + G++L LD+RG + L P +S HPV ++ R S PG RTDG ++ L++EGGGMRGC+GAGM+ AL L L D FDV+YGSSAG+L+GAYF++GQ P EG +YYD L AG+ FI+ A
Sbjct: 68 QKGFTVDKGHARR--LPVRTVEELHRYL--DRGIKLPHLDIRGQTHLLPLPDKNPIINQADASAEVNCTGLHPVLQVLYKRRLEGSRPGQRTDGHQVALAIEGGGMRGCLGAGMVCALKQLNLTDCFDVIYGSSAGALVGAYFITGQVPYEGGQVYYDWLPAAGKDFINTA 234
BLAST of EWM23186.1 vs. NCBI_GenBank
Match: gi|219118301|ref|XP_002179928.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217408981|gb|EEC48914.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 123.25 bits (308), Expect = 7.689e-28 Identity = 62/130 (47.69%), Postives = 80/130 (61.54%), Query Frame = 0
Query: 180 LRDLDVRGDSTAALLSSSFPPSPSPSSSPSFHPVAAAIHARIASRSTPGARTDGLKIGLSLEGGGMRGCVGAGMLAALNHLGLRDAFDVVYGSSAGSLMGAYFLSGQTPLEGPGIYYDILSQAGRKFIDQ 309
+R L+V GD+ PS HPVA +H R + G DG K+ L++EGGGMRGCV AGM+ AL+HL L FDV+YGSSAGS+ AYF++GQ P GP +YYD L+ AG+ FID+
Sbjct: 147 IRSLNVSGDTQII---------GDPSRPEYVHPVAQLVHERQRRGTALGQHKDGCKLALAVEGGGMRGCVTAGMICALHHLNLTSVFDVIYGSSAGSITSAYFITGQLPWFGPEVYYDQLTTAGKNFIDR 267
BLAST of EWM23186.1 vs. NCBI_GenBank
Match: gi|1072223558|gb|OEU08313.1| (hypothetical protein FRACYDRAFT_229252 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 121.709 bits (304), Expect = 1.873e-27 Identity = 54/106 (50.94%), Postives = 74/106 (69.81%), Query Frame = 0
Query: 203 SPSSSPSFHPVAAAIHARIASRSTPGARTDGLKIGLSLEGGGMRGCVGAGMLAALNHLGLRDAFDVVYGSSAGSLMGAYFLSGQTPLEGPGIYYDILSQAGRKFID 308
SP HPV ++ R ++ + A+ +G KI L +EGGGMRGCV GM+ A+++LGLRD D+VYGSSAGS++GAYF++GQ P GP +YYD L+ G+ FID
Sbjct: 76 SPDHPDIIHPVVRVLYDRKRNQESGAAKDEGQKIALVIEGGGMRGCVTGGMVCAIDYLGLRDCVDIVYGSSAGSIIGAYFITGQLPWFGPELYYDQLTTVGKSFID 181
BLAST of EWM23186.1 vs. NCBI_GenBank
Match: gi|1189386900|gb|OSX73989.1| (hypothetical protein BU14_0316s0017 [Porphyra umbilicalis]) HSP 1 Score: 120.939 bits (302), Expect = 1.013e-26 Identity = 60/100 (60.00%), Postives = 73/100 (73.00%), Query Frame = 0
Query: 210 FHPVAAAIHARIASRSTPGARTDGLKIGLSLEGGGMRGCVGAGMLAALNHLGLRDAFDVVYGSSAGSLMGAYFLSGQTPLEGPGIYYDILSQAGRKFIDQ 309
HPV A + AR A S PG R D K+GL++EGGGMRG + AGM+AAL +LGL+DA DVVYGSSAGS++GAYF+SGQ PL G IYYD S +FI +
Sbjct: 391 LHPVLAVLQARTACGSKPGKRADDFKVGLAIEGGGMRGVLSAGMVAALKYLGLQDAIDVVYGSSAGSIIGAYFVSGQGPLYGASIYYD--SICSDRFISK 488
BLAST of EWM23186.1 vs. NCBI_GenBank
Match: gi|546318871|ref|XP_005716868.1| (unnamed protein product [Chondrus crispus] >gi|507113419|emb|CDF37049.1| unnamed protein product [Chondrus crispus]) HSP 1 Score: 115.161 bits (287), Expect = 3.352e-25 Identity = 56/107 (52.34%), Postives = 74/107 (69.16%), Query Frame = 0
Query: 205 SSSPSFHPVAAAIHARIASRSTPGARTDGLKIGLSLEGGGMRGCVGAGMLAALNHLGLRDAFDVVYGSSAGSLMGAYFLSGQTPLEGPGIYYDILS---QAGRKFID 308
SS+ HPV + R+ S PG R D K+ L +EGGGMRG V AGM+AA+ + GL +AFDVVYGSSAG+++GAYF+S Q P+ G IYYDI+ + G++FID
Sbjct: 40 SSTEPLHPVLDILKRRLERPSKPGQRKDDRKVALCIEGGGMRGAVSAGMVAAIKYCGLENAFDVVYGSSAGAIVGAYFVSRQLPVYGAQIYYDIICSIPENGQRFID 146
BLAST of EWM23186.1 vs. NCBI_GenBank
Match: gi|545710364|ref|XP_005707490.1| (hypothetical protein Gasu_17340 [Galdieria sulphuraria] >gi|452823964|gb|EME30970.1| hypothetical protein Gasu_17340 [Galdieria sulphuraria]) HSP 1 Score: 112.079 bits (279), Expect = 5.436e-24 Identity = 53/103 (51.46%), Postives = 68/103 (66.02%), Query Frame = 0
Query: 205 SSSPSFHPVAAAIHARIASRSTPGARTDGLKIGLSLEGGGMRGCVGAGMLAALNHLGLRDAFDVVYGSSAGSLMGAYFLSGQTPLEGPGIYYDILSQAGRKFI 307
S+S S HPV + I R S PG R D ++ L +EGGGMRG + AGM AA+ +L L + FDVVYGSSAG+++GAYF+S Q PL G +YY+ L R FI
Sbjct: 121 SNSTSVHPVLSIIQKRKLEASLPGKRNDSFRVALCIEGGGMRGSIAAGMTAAIKYLNLENVFDVVYGSSAGAIIGAYFVSRQLPLYGTSVYYEDL--CSRDFI 221
BLAST of EWM23186.1 vs. NCBI_GenBank
Match: gi|223995323|ref|XP_002287345.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220976461|gb|EED94788.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 112.079 bits (279), Expect = 6.649e-24 Identity = 54/129 (41.86%), Postives = 75/129 (58.14%), Query Frame = 0
Query: 203 SPSSSPSFHPVAAAIHAR---------------IASRSTPGART--------DGLKIGLSLEGGGMRGCVGAGMLAALNHLGLRDAFDVVYGSSAGSLMGAYFLSGQTPLEGPGIYYDILSQAGRKFID 308
SP + HPV +H R + ++ +R DG ++ L++EGGGMRGCV AGM+ A++HLGL D DVVYGSSAG+++GAYF++ Q P GP +YYD L+ AG FI+
Sbjct: 181 SPDHKDAIHPVVKLVHERRRQIEKIKSATKNNDVTTQINDNSRNIHRTMPPEDGFRVALAVEGGGMRGCVTAGMVTAIHHLGLEDTIDVVYGSSAGTVIGAYFITRQLPWYGPEVYYDALTTAGDTFIN 309
BLAST of EWM23186.1 vs. NCBI_GenBank
Match: gi|551666742|ref|XP_005836132.1| (hypothetical protein GUITHDRAFT_93499 [Guillardia theta CCMP2712] >gi|428180284|gb|EKX49152.1| hypothetical protein GUITHDRAFT_93499 [Guillardia theta CCMP2712]) HSP 1 Score: 108.612 bits (270), Expect = 3.633e-23 Identity = 54/108 (50.00%), Postives = 71/108 (65.74%), Query Frame = 0
Query: 209 SFHPVAAAIHARIASRSTPGARTDGLKIGLSLEGGGMRGCVGAGMLAALNHLGLRDAFDVVYGSSAGSLMGAYFLSGQ--TPLEGPGIYYDILS--QAGRKFIDQAPI 312
+ HPV + R S PG R+DG K+ L++EGGGMRGCV AGM AA+ G D FD VYGSSAGSL+GAY+++ Q P G +YYD+L+ +A FID++ I
Sbjct: 28 TIHPVLQVLMQRRRESSKPGQRSDGFKVALAIEGGGMRGCVAAGMAAAVKDAGFHDCFDAVYGSSAGSLIGAYWIANQFGMPQYGCSLYYDLLTDERAKENFIDRSQI 135 The following BLAST results are available for this feature:
BLAST of EWM23186.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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