EWM23190.1, cds7483 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23190.1 vs. NCBI_GenBank
Match: gi|585104080|gb|EWM23190.1| (hypothetical protein Naga_101571g1 [Nannochloropsis gaditana]) HSP 1 Score: 497.664 bits (1280), Expect = 2.872e-178 Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0
Query: 1 MNSTPAVNIASSPGEGSEAETSAPLVTQEAELSASPASETRTEQSESASTASTDPSENTSTMTNASTGVLSTSTATEISPPLVAPTPTYPGHWTRGAGRKIIVGVCAREKKAKSKAMNEILSRLDRKKFQVLIFGDQCILQQPPEQWPFCDALIAFYSTGFPLAKAEAYAELVKPYVLNDLSMQRALHDRRCVYDLLMENNIDVPVHAYLNRDEPGGGRLEEFDEFIVVNGMQGGSLGH 239
MNSTPAVNIASSPGEGSEAETSAPLVTQEAELSASPASETRTEQSESASTASTDPSENTSTMTNASTGVLSTSTATEISPPLVAPTPTYPGHWTRGAGRKIIVGVCAREKKAKSKAMNEILSRLDRKKFQVLIFGDQCILQQPPEQWPFCDALIAFYSTGFPLAKAEAYAELVKPYVLNDLSMQRALHDRRCVYDLLMENNIDVPVHAYLNRDEPGGGRLEEFDEFIVVNGMQGGSLGH
Sbjct: 1 MNSTPAVNIASSPGEGSEAETSAPLVTQEAELSASPASETRTEQSESASTASTDPSENTSTMTNASTGVLSTSTATEISPPLVAPTPTYPGHWTRGAGRKIIVGVCAREKKAKSKAMNEILSRLDRKKFQVLIFGDQCILQQPPEQWPFCDALIAFYSTGFPLAKAEAYAELVKPYVLNDLSMQRALHDRRCVYDLLMENNIDVPVHAYLNRDEPGGGRLEEFDEFIVVNGMQGGSLGH 239
BLAST of EWM23190.1 vs. NCBI_GenBank
Match: gi|673048415|ref|XP_008878168.1| (hypothetical protein H310_12755 [Aphanomyces invadans] >gi|574466114|gb|ETV93146.1| hypothetical protein H310_12755 [Aphanomyces invadans]) HSP 1 Score: 172.555 bits (436), Expect = 1.543e-45 Identity = 85/170 (50.00%), Postives = 116/170 (68.24%), Query Frame = 0
Query: 65 ASTGVLSTSTATEISPPLVAPTPTYPGHWTRGAGRKIIVGVCAREKKAKSKAMNEILSRLDRKK-FQVLIFGDQCILQQPPEQWPFCDALIAFYSTGFPLAKAEAYAELVKPYVLNDLSMQRALHDRRCVYDLLMENNIDVPVHAYLNRDEPGGGRLEEFDEFIVVNGMQ 233
AS +S+S +E P +PG +R A R+ +VGVCA EKK++SK M EIL RL +KK F ++IF D IL P E+WP C+A+ +FYSTGFPLAKAE+Y L +P ++NDLSMQ L DRR VY++L+ N ++VP HA +NRD P LEE + +++VNG+Q
Sbjct: 2 ASHSFVSSSIGSE-------EDPNHPGFQSR-AQRRYVVGVCAMEKKSRSKPMQEILRRLVKKKQFDLVIFTDDMILNHPIEEWPICEAIFSFYSTGFPLAKAESYVHLRRPVLVNDLSMQHVLFDRRKVYEVLIRNGVNVPRHAIVNRDCPNPDILEESENYVIVNGVQ 163
BLAST of EWM23190.1 vs. NCBI_GenBank
Match: gi|1173960851|gb|OQS06939.1| (inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase [Thraustotheca clavata]) HSP 1 Score: 169.088 bits (427), Expect = 2.187e-44 Identity = 82/155 (52.90%), Postives = 107/155 (69.03%), Query Frame = 0
Query: 80 PPLVAPTPTYPGHWTRGAGRKIIVGVCAREKKAKSKAMNEILSRLDRKK-FQVLIFGDQCILQQPPEQWPFCDALIAFYSTGFPLAKAEAYAELVKPYVLNDLSMQRALHDRRCVYDLLMENNIDVPVHAYLNRDEPGGGRLEEFDEFIVVNGMQ 233
PP VA TP RK +VG+CA EKK KSK M EIL RL++KK F +++F D IL+QP + WP CDAL++FYSTGFPL KAE+Y L +P ++NDLSMQ L DRR VY++L+ N ++VP HA +NRD P LEE + ++VNG+Q
Sbjct: 3 PPCVARTPP-------PMSRKYVVGICAMEKKTKSKPMQEILRRLNKKKHFDLVVFTDDMILRQPVDAWPVCDALLSFYSTGFPLEKAESYVHLRRPVLVNDLSMQHILFDRRKVYEVLIRNGVNVPRHAIVNRDGPTPDILEESENHVIVNGVQ 150
BLAST of EWM23190.1 vs. NCBI_GenBank
Match: gi|1173935918|gb|OQR86962.1| (inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase [Achlya hypogyna]) HSP 1 Score: 167.162 bits (422), Expect = 1.013e-43 Identity = 74/137 (54.01%), Postives = 101/137 (73.72%), Query Frame = 0
Query: 98 GRKIIVGVCAREKKAKSKAMNEILSRLDRKK-FQVLIFGDQCILQQPPEQWPFCDALIAFYSTGFPLAKAEAYAELVKPYVLNDLSMQRALHDRRCVYDLLMENNIDVPVHAYLNRDEPGGGRLEEFDEFIVVNGMQ 233
R+ +VGVCA EKK +SK M EIL RL++KK F +++F D+ L QP E+WP CDA+ +FYSTGFPL KAE Y +L +P ++NDLSMQ L DRR VY++L+ N ++VP HA +NRD P LEE + +++VNG+Q
Sbjct: 33 ARRYVVGVCAMEKKTRSKPMQEILRRLNKKKQFDLVVFTDEMTLHQPIEEWPICDAMFSFYSTGFPLEKAEQYVQLRRPVLVNDLSMQHVLFDRRKVYEVLIRNGVNVPRHAIVNRDGPTPDVLEESENYVIVNGVQ 169
BLAST of EWM23190.1 vs. NCBI_GenBank
Match: gi|669164100|ref|XP_008617612.1| (hypothetical protein SDRG_13310 [Saprolegnia diclina VS20] >gi|530730731|gb|EQC28973.1| hypothetical protein SDRG_13310 [Saprolegnia diclina VS20]) HSP 1 Score: 165.236 bits (417), Expect = 4.653e-43 Identity = 75/136 (55.15%), Postives = 100/136 (73.53%), Query Frame = 0
Query: 99 RKIIVGVCAREKKAKSKAMNEILSRLDRKK-FQVLIFGDQCILQQPPEQWPFCDALIAFYSTGFPLAKAEAYAELVKPYVLNDLSMQRALHDRRCVYDLLMENNIDVPVHAYLNRDEPGGGRLEEFDEFIVVNGMQ 233
R+ +VGVCA EKK +SK M EIL RL++KK F +++F D+ L+QP E WP CDA+ +FYSTGFPL KAE Y +L +P ++NDLSMQ L DRR VY++L+ N ++VP HA +NRD P LEE + I+VNG+Q
Sbjct: 36 RRYVVGVCAMEKKTRSKPMQEILRRLNKKKQFDLVVFTDEMTLRQPIEDWPICDAMFSFYSTGFPLEKAERYVQLRRPVLVNDLSMQHVLFDRRKVYEVLIRNGVNVPRHAIVNRDGPAPDVLEESENCIIVNGVQ 171
BLAST of EWM23190.1 vs. NCBI_GenBank
Match: gi|813177345|ref|XP_012205142.1| (hypothetical protein SPRG_10627 [Saprolegnia parasitica CBS 223.65] >gi|641530053|gb|KDO24198.1| hypothetical protein SPRG_10627 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 164.851 bits (416), Expect = 7.395e-43 Identity = 75/137 (54.74%), Postives = 100/137 (72.99%), Query Frame = 0
Query: 98 GRKIIVGVCAREKKAKSKAMNEILSRLDRKK-FQVLIFGDQCILQQPPEQWPFCDALIAFYSTGFPLAKAEAYAELVKPYVLNDLSMQRALHDRRCVYDLLMENNIDVPVHAYLNRDEPGGGRLEEFDEFIVVNGMQ 233
R+ +VGVCA EKK +SK M EIL RL++KK F +++F D+ L+QP E WP CDA+ +FYSTGFPL KAE Y +L +P ++NDLSMQ L DRR VY++L+ N ++VP HA +NRD P LEE + I+VNG+Q
Sbjct: 35 ARRYVVGVCAMEKKTRSKPMQEILRRLNKKKQFDLVVFTDEMTLRQPIEDWPICDAMFSFYSTGFPLEKAERYVQLRRPVLVNDLSMQHVLFDRRKVYEVLIRNGVNVPRHAVVNRDGPTPDVLEESENCIIVNGVQ 171
BLAST of EWM23190.1 vs. NCBI_GenBank
Match: gi|698797056|ref|XP_009831557.1| (hypothetical protein H257_07665 [Aphanomyces astaci] >gi|574113348|gb|ETV78838.1| hypothetical protein H257_07665 [Aphanomyces astaci]) HSP 1 Score: 164.466 bits (415), Expect = 1.023e-42 Identity = 77/148 (52.03%), Postives = 106/148 (71.62%), Query Frame = 0
Query: 87 PTYPGHWTRGAGRKIIVGVCAREKKAKSKAMNEILSRLDRKK-FQVLIFGDQCILQQPPEQWPFCDALIAFYSTGFPLAKAEAYAELVKPYVLNDLSMQRALHDRRCVYDLLMENNIDVPVHAYLNRDEPGGGRLEEFDEFIVVNGMQ 233
P P +R A R+ +VGVCA EKK++SK M EIL RL +KK F ++IF D IL +P E WP C+A+ +FYSTGFPLAKAE+Y L +P ++NDLS+Q L DRR VY++L+ N ++VP HA +NRD P L+E + +++VNG+Q
Sbjct: 18 PNNPSFQSR-AQRRYVVGVCAMEKKSRSKPMQEILRRLVKKKQFDLVIFTDDMILNRPIEDWPICEAIFSFYSTGFPLAKAESYVHLRRPVLVNDLSIQHVLFDRRKVYEVLIRNGVNVPRHAIVNRDGPTPDVLDESENYVIVNGVQ 164
BLAST of EWM23190.1 vs. NCBI_GenBank
Match: gi|223996735|ref|XP_002288041.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220977157|gb|EED95484.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 159.458 bits (402), Expect = 4.400e-41 Identity = 77/138 (55.80%), Postives = 99/138 (71.74%), Query Frame = 0
Query: 97 AGRKIIVGVCAREKKAKSKAMNEILSRLDRKKFQVLIFGDQCILQQPPEQWPFCDALIAFYSTGFPLAKAEAYAELVKPYVLNDLSMQRALHDRRCVYDLLMENNIDVPVHAYLNRD--EPGGGRLEEFDEFIVVNGM 232
++I +GVCA +KKA+SK M+EIL+RL+ + F+ + FGD IL +P E WP CD LIAFYS G+PL KAE Y L +PY+LNDL MQR L DRR VYDLL E+ IDVP H +++RD EP +EE D+ I VNG+
Sbjct: 3 VAKRIRLGVCAMDKKARSKPMSEILNRLNPETFEPVFFGDAVILNEPVENWPVCDVLIAFYSNGYPLEKAEKYVTLRQPYLLNDLKMQRVLMDRRRVYDLLEESGIDVPRHVFMSRDGYEPD---IEEHDDHIEVNGV 137
BLAST of EWM23190.1 vs. NCBI_GenBank
Match: gi|1210519701|dbj|GAX21470.1| (inositol-hexakisphosphate/diphosphoinositol-pentakisphosphate 1-kinase [Fistulifera solaris]) HSP 1 Score: 157.918 bits (398), Expect = 1.878e-40 Identity = 77/143 (53.85%), Postives = 96/143 (67.13%), Query Frame = 0
Query: 101 IIVGVCAREKKAKSKAMNEILSRLDRKKFQVLIFGDQCILQQPPEQWPFCDALIAFYSTGFPLAKAEAYAELVKPYVLNDLSMQRALHDRRCVYDLLMENNIDVPVHAYLNRD--------EPGGGR---LEEFDEFIVVNGM 232
I +G+CA +KKA+SK M EILSRLD F+V+ FGD IL +P E+WP CD LIAF+S +PL KA+ Y L KP +LNDL MQ L DRR VYDLL + IDVP HAYL+RD + G R ++EFD+ I VNG+
Sbjct: 68 IRLGICAMDKKARSKPMAEILSRLDEDHFRVVFFGDDVILNKPVEEWPICDVLIAFFSKNYPLPKAKEYVALRKPLILNDLEMQELLQDRRRVYDLLEASGIDVPRHAYLSRDGYVSTGTGDGNGNRNQEVQEFDDHIEVNGI 210
BLAST of EWM23190.1 vs. NCBI_GenBank
Match: gi|1210523876|dbj|GAX17200.1| (inositol-hexakisphosphate/diphosphoinositol-pentakisphosphate 1-kinase [Fistulifera solaris]) HSP 1 Score: 157.532 bits (397), Expect = 2.606e-40 Identity = 77/143 (53.85%), Postives = 96/143 (67.13%), Query Frame = 0
Query: 101 IIVGVCAREKKAKSKAMNEILSRLDRKKFQVLIFGDQCILQQPPEQWPFCDALIAFYSTGFPLAKAEAYAELVKPYVLNDLSMQRALHDRRCVYDLLMENNIDVPVHAYLNRD--------EPGGGR---LEEFDEFIVVNGM 232
I +G+CA +KKA+SK M EILSRLD F+V+ FGD IL +P E+WP CD LIAF+S +PL KA+ Y L KP +LNDL MQ L DRR VYDLL + IDVP HAYL+RD + G R ++EFD+ I VNG+
Sbjct: 70 IRLGICAMDKKARSKPMAEILSRLDEDHFRVVFFGDDVILNKPVEEWPVCDVLIAFFSKNYPLPKAKEYVALRKPLILNDLDMQELLQDRRRVYDLLEASGIDVPRHAYLSRDGYVSTGTGDGNGNRNQEVQEFDDHIEVNGI 212 The following BLAST results are available for this feature:
BLAST of EWM23190.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|