EWM23239.1, cds7434 (CDS) Nannochloropsis gaditana

Overview
NameEWM23239.1
Unique Namecds7434
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002471.1:624162..624465 +
Alignment locationCM002471.1:624615..624733 +
Alignment locationCM002471.1:625156..625249 +
Alignment locationCM002471.1:625524..625601 +
Alignment locationCM002471.1:625675..625871 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23239.1
Productinorganic diphosphatase
Orig transcript idgnl|cribi|Naga_100966g1.5253.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:624162..624465 +
CM002471.1supercontigCM002471.1:624615..624733 +
CM002471.1supercontigCM002471.1:625156..625249 +
CM002471.1supercontigCM002471.1:625524..625601 +
CM002471.1supercontigCM002471.1:625675..625871 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0005488binding
GO:0004427inorganic diphosphatase activity
GO:0000287magnesium ion binding
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0008152metabolic process
GO:0006796phosphate-containing compound metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005829cytosol
GO:0016020membrane
GO:0005737cytoplasm
Vocabulary: INTERPRO
TermDefinition
IPR008162Pyrophosphatase
Homology
[Close]
BLAST of EWM23239.1 vs. NCBI_GenBank
Match: gi|585104192|gb|EWM23239.1| (inorganic diphosphatase [Nannochloropsis gaditana])

HSP 1 Score: 521.931 bits (1343), Expect = 0.000e+0
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0 
Query:    1 MLLLFRRGVAAASFFPPTRRTLLAPHTKAVGGLVRSASSSPLSSASRVNRLGRISLSSSSSSAAAQPRGVTATAALPGLAAFFFLLAQTEHEPTATAAAGSGSPPGNVSPSTHAQYAPVYDIPIEGKAFPGEVPVFIEVSKGSRMKYEWDSNVGLLRLDRVLHSAVFYPFDYGFIPQTLCDDGDPLDVLVMGDSSLEPGCIVDVRVLGYMVMEDEKGKDENGRRSPSLPPSLPPSLLFSCFIISVLLSSLSPALPLSLRSLPC 263
            MLLLFRRGVAAASFFPPTRRTLLAPHTKAVGGLVRSASSSPLSSASRVNRLGRISLSSSSSSAAAQPRGVTATAALPGLAAFFFLLAQTEHEPTATAAAGSGSPPGNVSPSTHAQYAPVYDIPIEGKAFPGEVPVFIEVSKGSRMKYEWDSNVGLLRLDRVLHSAVFYPFDYGFIPQTLCDDGDPLDVLVMGDSSLEPGCIVDVRVLGYMVMEDEKGKDENGRRSPSLPPSLPPSLLFSCFIISVLLSSLSPALPLSLRSLPC
Sbjct:    1 MLLLFRRGVAAASFFPPTRRTLLAPHTKAVGGLVRSASSSPLSSASRVNRLGRISLSSSSSSAAAQPRGVTATAALPGLAAFFFLLAQTEHEPTATAAAGSGSPPGNVSPSTHAQYAPVYDIPIEGKAFPGEVPVFIEVSKGSRMKYEWDSNVGLLRLDRVLHSAVFYPFDYGFIPQTLCDDGDPLDVLVMGDSSLEPGCIVDVRVLGYMVMEDEKGKDENGRRSPSLPPSLPPSLLFSCFIISVLLSSLSPALPLSLRSLPC 263
[Close]
BLAST of EWM23239.1 vs. NCBI_GenBank
Match: gi|298714926|emb|CBJ27682.1| (Inorganic diphosphatase [Ectocarpus siliculosus])

HSP 1 Score: 150.214 bits (378), Expect = 3.258e-40
Identity = 70/105 (66.67%), Postives = 79/105 (75.24%), Query Frame = 0 
Query:  117 APVYDIPIEGKAFPGEVPVFIEVSKGSRMKYEWDSNVGLLRLDRVLHSAVFYPFDYGFIPQTLCDDGDPLDVLVMGDSSLEPGCIVDVRVLGYMVMEDEKGKDEN 221
            A  Y +PI G+  P     FIEVS+ SRMKYEWD    +L+LDRVLH A FYP DYGFIPQTLC DGDPLDVLV+G S+L+PG IVDVR LG+M MEDEKG DE 
Sbjct:  104 AEAYSLPI-GRTSPQVCNCFIEVSRESRMKYEWDEETNMLKLDRVLHGAAFYPHDYGFIPQTLCGDGDPLDVLVLGTSALQPGSIVDVRPLGFMCMEDEKGLDEK 207
[Close]
BLAST of EWM23239.1 vs. NCBI_GenBank
Match: gi|1200294018|gb|OUU16002.1| (hypothetical protein CBB97_23450 [Alphaproteobacteria bacterium TMED37])

HSP 1 Score: 124.02 bits (310), Expect = 1.566e-31
Identity = 63/101 (62.38%), Postives = 71/101 (70.30%), Query Frame = 0 
Query:  120 YDIPIEGKAFPGEVPVFIEVSKGSRMKYEWDSNVGLLRLDRVLHSAVFYPFDYGFIPQTLCDDGDPLDVLVMGDSSLEPGCIVDVRVLGYMVMEDEKGKDE 220
            Y +   GK FP  +P  IEVSK SR KYEWD N+  L L RVLHS+V YP++YG  PQTL DDGD LDVLVM D  L PG +V VR + YMVMEDEKG DE
Sbjct:    7 YHLXXYGKGFPEILPAXIEVSKNSRCKYEWDDNLKTLVLXRVLHSSVVYPYNYGXXPQTLGDDGDCLDVLVMXDGELLPGSMVYVRPICYMVMEDEKGYDE 107
[Close]
BLAST of EWM23239.1 vs. NCBI_GenBank
Match: gi|1123896109|ref|WP_074419999.1| (inorganic pyrophosphatase [Hydrotalea flava])

HSP 1 Score: 119.783 bits (299), Expect = 1.096e-29
Identity = 54/95 (56.84%), Postives = 68/95 (71.58%), Query Frame = 0 
Query:  126 GKAFPGEVPVFIEVSKGSRMKYEWDSNVGLLRLDRVLHSAVFYPFDYGFIPQTLCDDGDPLDVLVMGDSSLEPGCIVDVRVLGYMVMEDEKGKDE 220
            G   P  V   IE+ KGSRMKYE D   GLLRLDRVL+SA++YP +YG +PQT  DDGDPLD+LV+    ++P C+VD R++G M MEDE G D+
Sbjct:   18 GNNVPNVVTTIIEIPKGSRMKYELDKASGLLRLDRVLYSAMYYPMNYGLVPQTYFDDGDPLDILVICSFDIQPLCVVDARIIGIMHMEDENGIDD 112
[Close]
BLAST of EWM23239.1 vs. NCBI_GenBank
Match: gi|1098373346|emb|SFE86146.1| (inorganic pyrophosphatase [Thermoflexibacter ruber])

HSP 1 Score: 117.472 bits (293), Expect = 5.876e-29
Identity = 55/95 (57.89%), Postives = 68/95 (71.58%), Query Frame = 0 
Query:  126 GKAFPGEVPVFIEVSKGSRMKYEWDSNVGLLRLDRVLHSAVFYPFDYGFIPQTLCDDGDPLDVLVMGDSSLEPGCIVDVRVLGYMVMEDEKGKDE 220
            G+ +P  V   IE+ KGSR KYE D   G LRLDRVL+S+V+YP +YGFIP+T CDDGDPLD+LVM   +LEP CIVD +V+G M M D    D+
Sbjct:   11 GRKYPSVVQSIIEIPKGSRAKYELDKESGFLRLDRVLYSSVYYPANYGFIPRTYCDDGDPLDILVMSLINLEPLCIVDAKVIGVMRMLDNGEADD 105
[Close]
BLAST of EWM23239.1 vs. NCBI_GenBank
Match: gi|973032571|gb|KUK11056.1| (Inorganic pyrophosphatase [Clostridia bacterium 41_269])

HSP 1 Score: 116.701 bits (291), Expect = 7.409e-29
Identity = 53/89 (59.55%), Postives = 64/89 (71.91%), Query Frame = 0 
Query:  133 VPVFIEVSKGSRMKYEWDSNVGLLRLDRVLHSAVFYPFDYGFIPQTLCDDGDPLDVLVMGDSSLEPGCIVDVRVLGYMVMEDEKGKDEN 221
            + VFIE+ +GS  KYE+D   GL RLDRVL+S VFYP DYGFIP TL DDGD LD +VM      PGC++  R++G  +MEDEKGKDE 
Sbjct:    6 IEVFIEIPRGSNNKYEYDKEKGLFRLDRVLYSPVFYPADYGFIPDTLADDGDALDAMVMTTFPTFPGCLIKARIIGMFIMEDEKGKDEK 94
[Close]
BLAST of EWM23239.1 vs. NCBI_GenBank
Match: gi|504668887|ref|WP_014855989.1| (inorganic pyrophosphatase [Melioribacter roseus] >gi|395811805|gb|AFN74554.1| inorganic pyrophosphatase family protein [Melioribacter roseus P3M-2])

HSP 1 Score: 116.701 bits (291), Expect = 1.967e-28
Identity = 58/129 (44.96%), Postives = 77/129 (59.69%), Query Frame = 0 
Query:   92 EPTATAAAGSGSPPGNVSPSTHAQYAPVYDIPIEGKAFPGEVPVFIEVSKGSRMKYEWDSNVGLLRLDRVLHSAVFYPFDYGFIPQTLCDDGDPLDVLVMGDSSLEPGCIVDVRVLGYMVMEDEKGKDE 220
            E   T A      P   +P  H +Y         G+  P  V   IE+ +GS+ KYE D N GLL+LDRVL SAV+YP +YGF+PQTL DDGDPLD+LV+    ++P CI++ +V+G M M DE   D+
Sbjct:    9 EQEKTVAETVAKIPKYFNPWHHVEY---------GQNAPAVVNAIIEIPQGSKAKYELDKNSGLLKLDRVLFSAVYYPANYGFLPQTLSDDGDPLDILVLSSIDVDPMCIIESKVIGMMRMVDEDEIDD 128
[Close]
BLAST of EWM23239.1 vs. NCBI_GenBank
Match: gi|551635010|ref|XP_005820342.1| (hypothetical protein GUITHDRAFT_147954 [Guillardia theta CCMP2712] >gi|428164333|gb|EKX33362.1| hypothetical protein GUITHDRAFT_147954 [Guillardia theta CCMP2712])

HSP 1 Score: 121.324 bits (303), Expect = 1.990e-28
Identity = 52/91 (57.14%), Postives = 68/91 (74.73%), Query Frame = 0 
Query:  131 GEVPVFIEVSKGSRMKYEWDSNVGLLRLDRVLHSAVFYPFDYGFIPQTLCDDGDPLDVLVMGDSSLEPGCIVDVRVLGYMVMEDEKGKDEN 221
            G    ++EV KG   KYEWD + G L LDRVLHS++FYP DYGFIP+TLC DGDP+DV+++ + SL PG + DVRV+G + M DEKG+D+ 
Sbjct:  127 GVCSAYVEVKKGDANKYEWDKDTGFLTLDRVLHSSIFYPGDYGFIPRTLCGDGDPIDVVILSNFSLTPGVLCDVRVVGALDMADEKGEDQK 217
[Close]
BLAST of EWM23239.1 vs. NCBI_GenBank
Match: gi|497675266|ref|WP_009989450.1| (inorganic pyrophosphatase [Sulfolobus solfataricus] >gi|21542102|sp|Q97W51.1|IPYR_SULSO RecName: Full=Inorganic pyrophosphatase; AltName: Full=Pyrophosphate phospho-hydrolase; Short=PPase >gi|13815694|gb|AAK42538.1| Inorganic pyrophosphatase, putative (ppa) [Sulfolobus solfataricus P2] >gi|261600891|gb|ACX90494.1| Inorganic diphosphatase [Sulfolobus solfataricus 98/2] >gi|800900450|gb|AKA72633.1| inorganic pyrophosphatase [Sulfolobus solfataricus] >gi|800903150|gb|AKA75332.1| inorganic pyrophosphatase [Sulfolobus solfataricus] >gi|800905844|gb|AKA78025.1| inorganic pyrophosphatase [Sulfolobus solfataricus] >gi|1016811834|emb|SAI86072.1| inorganic pyrophosphatase [Sulfolobus solfataricus])

HSP 1 Score: 115.161 bits (287), Expect = 3.516e-28
Identity = 49/94 (52.13%), Postives = 73/94 (77.66%), Query Frame = 0 
Query:  126 GKAFPGEVPVFIEVSKGSRMKYEWDSNVGLLRLDRVLHSAVFYPFDYGFIPQTLCDDGDPLDVLVMGDSSLEPGCIVDVRVLGYMVMEDEKGKD 219
            GK  P E+ VFIE+  GS +KYE+D    ++++DRVL++++ YPF+YGFIP+TL +DGDPLDVLV+G+ SL PG +++ R +G + M DE+G+D
Sbjct:    6 GKKAPDEINVFIEIPMGSNIKYEYDEEEDIIKVDRVLYTSMVYPFNYGFIPETLEEDGDPLDVLVLGNYSLMPGTVIEARPIGMIYMRDEEGED 99
[Close]
BLAST of EWM23239.1 vs. NCBI_GenBank
Match: gi|502103834|ref|WP_012710361.1| (inorganic pyrophosphatase [Sulfolobus islandicus] >gi|227455682|gb|ACP34369.1| Inorganic diphosphatase [Sulfolobus islandicus L.S.2.15] >gi|227458388|gb|ACP37074.1| Inorganic diphosphatase [Sulfolobus islandicus M.14.25] >gi|228008718|gb|ACP44480.1| Inorganic diphosphatase [Sulfolobus islandicus Y.G.57.14] >gi|228013932|gb|ACP49693.1| Inorganic diphosphatase [Sulfolobus islandicus Y.N.15.51] >gi|228018806|gb|ACP54213.1| Inorganic diphosphatase [Sulfolobus islandicus M.16.27] >gi|238379748|gb|ACR40836.1| Inorganic diphosphatase [Sulfolobus islandicus M.16.4] >gi|284444485|gb|ADB85987.1| Inorganic diphosphatase [Sulfolobus islandicus L.D.8.5] >gi|323473672|gb|ADX84278.1| inorganic diphosphatase [Sulfolobus islandicus REY15A] >gi|323476323|gb|ADX81561.1| Inorganic diphosphatase [Sulfolobus islandicus HVE10/4] >gi|478753083|gb|AGJ61655.1| Inorganic pyrophosphatase [Sulfolobus islandicus LAL14/1])

HSP 1 Score: 114.005 bits (284), Expect = 7.995e-28
Identity = 50/94 (53.19%), Postives = 73/94 (77.66%), Query Frame = 0 
Query:  126 GKAFPGEVPVFIEVSKGSRMKYEWDSNVGLLRLDRVLHSAVFYPFDYGFIPQTLCDDGDPLDVLVMGDSSLEPGCIVDVRVLGYMVMEDEKGKD 219
            GK  P EV VFIE+  GS +KYE+D    ++++DRVL++++ YPF+YGFIP+TL +DGDPLDVLV+G+ SL PG +++ R +G + M DE+G+D
Sbjct:    6 GKKAPDEVNVFIEIPMGSNIKYEYDEEGEVIKVDRVLYTSMVYPFNYGFIPETLEEDGDPLDVLVLGNYSLMPGTVIEARPIGMIYMRDEEGED 99
The following BLAST results are available for this feature:
BLAST of EWM23239.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585104192|gb|EWM23239.1|0.000e+0100.00inorganic diphosphatase [Nannochloropsis gaditana][more]
gi|298714926|emb|CBJ27682.1|3.258e-4066.67Inorganic diphosphatase [Ectocarpus siliculosus][more]
gi|1200294018|gb|OUU16002.1|1.566e-3162.38hypothetical protein CBB97_23450 [Alphaproteobacte... [more]
gi|1123896109|ref|WP_074419999.1|1.096e-2956.84inorganic pyrophosphatase [Hydrotalea flava][more]
gi|1098373346|emb|SFE86146.1|5.876e-2957.89inorganic pyrophosphatase [Thermoflexibacter ruber... [more]
gi|973032571|gb|KUK11056.1|7.409e-2959.55Inorganic pyrophosphatase [Clostridia bacterium 41... [more]
gi|504668887|ref|WP_014855989.1|1.967e-2844.96inorganic pyrophosphatase [Melioribacter roseus] >... [more]
gi|551635010|ref|XP_005820342.1|1.990e-2857.14hypothetical protein GUITHDRAFT_147954 [Guillardia... [more]
gi|497675266|ref|WP_009989450.1|3.516e-2852.13inorganic pyrophosphatase [Sulfolobus solfataricus... [more]
gi|502103834|ref|WP_012710361.1|7.995e-2853.19inorganic pyrophosphatase [Sulfolobus islandicus] ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7452rna7452Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications