EWM29931.1, cds743 (CDS) Nannochloropsis gaditana

Overview
NameEWM29931.1
Unique Namecds743
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:307103..307180 +
Alignment locationCM002456.1:307326..307739 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29931.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100661g2.3412.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:307103..307180 +
CM002456.1supercontigCM002456.1:307326..307739 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM29931.1 vs. NCBI_GenBank
Match: gi|585112516|gb|EWM29931.1| (hypothetical protein Naga_100661g2 [Nannochloropsis gaditana])

HSP 1 Score: 327.791 bits (839), Expect = 1.593e-113
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0 
Query:    1 MATLRRSMAWTSSCMRSVERGESSDKETAKQSPRTRFSRLSIHPPTDPGKPTRRNGNTSRGPYPPQCRAMAGRRRPSKTLPRSTEKPPPCDTEADRSFACVMSGFCSTLGTTREEGLLRKLPNPKPSAIPRRIPARVRLYLLYASFKLSWVVTTWKMAIRWKT 163
            MATLRRSMAWTSSCMRSVERGESSDKETAKQSPRTRFSRLSIHPPTDPGKPTRRNGNTSRGPYPPQCRAMAGRRRPSKTLPRSTEKPPPCDTEADRSFACVMSGFCSTLGTTREEGLLRKLPNPKPSAIPRRIPARVRLYLLYASFKLSWVVTTWKMAIRWKT
Sbjct:    1 MATLRRSMAWTSSCMRSVERGESSDKETAKQSPRTRFSRLSIHPPTDPGKPTRRNGNTSRGPYPPQCRAMAGRRRPSKTLPRSTEKPPPCDTEADRSFACVMSGFCSTLGTTREEGLLRKLPNPKPSAIPRRIPARVRLYLLYASFKLSWVVTTWKMAIRWKT 163
The following BLAST results are available for this feature:
BLAST of EWM29931.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585112516|gb|EWM29931.1|1.593e-113100.00hypothetical protein Naga_100661g2 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna743rna743Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications