EWM23261.1, cds7412 (CDS) Nannochloropsis gaditana

Overview
NameEWM23261.1
Unique Namecds7412
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002471.1:567425..568055 +

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Properties
Property NameValue
Protein idEWM23261.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_102012g1.5753.mrna
GbkeyCDS
End range.
End range568055
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:567425..568055 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
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BLAST of EWM23261.1 vs. NCBI_GenBank
Match: gi|585104249|gb|EWM23261.1| (hypothetical protein Naga_102012g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 410.223 bits (1053), Expect = 1.132e-144
Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0 
Query:    1 MTRGRGGRALQGSLPPTLPPSLPPFIDTSPLPFLLSSFVGTRASCYDSFRVMSLQSFLLFLHSFPSPCFYHFAYLSRSIRLPFIHARSATNNTGVFLSSFVLLSSVHILYAFFLPSSSLLPLPFPPCILPLSATTAGTHLAKQNKGIQAATKALWRDIARLSKDPSTLPPPSSLSSPTPLVLNEALYPPTRLARLLSLQRQHDHAAVDAE 210
            MTRGRGGRALQGSLPPTLPPSLPPFIDTSPLPFLLSSFVGTRASCYDSFRVMSLQSFLLFLHSFPSPCFYHFAYLSRSIRLPFIHARSATNNTGVFLSSFVLLSSVHILYAFFLPSSSLLPLPFPPCILPLSATTAGTHLAKQNKGIQAATKALWRDIARLSKDPSTLPPPSSLSSPTPLVLNEALYPPTRLARLLSLQRQHDHAAVDAE
Sbjct:    1 MTRGRGGRALQGSLPPTLPPSLPPFIDTSPLPFLLSSFVGTRASCYDSFRVMSLQSFLLFLHSFPSPCFYHFAYLSRSIRLPFIHARSATNNTGVFLSSFVLLSSVHILYAFFLPSSSLLPLPFPPCILPLSATTAGTHLAKQNKGIQAATKALWRDIARLSKDPSTLPPPSSLSSPTPLVLNEALYPPTRLARLLSLQRQHDHAAVDAE 210
The following BLAST results are available for this feature:
BLAST of EWM23261.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585104249|gb|EWM23261.1|1.132e-144100.00hypothetical protein Naga_102012g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7430rna7430Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications