EWM23319.1, cds7366 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23319.1 vs. NCBI_GenBank
Match: gi|585104326|gb|EWM23319.1| (myc-induced nuclear antigen [Nannochloropsis gaditana]) HSP 1 Score: 997.268 bits (2577), Expect = 0.000e+0 Identity = 487/487 (100.00%), Postives = 487/487 (100.00%), Query Frame = 0 Query: 1 MRARRWWRVSCCALFLHVACSKAFLRPCPAVFNPPHSKHQDPQVPRLPGHCPLTTLPAATTANAPISTAPVVADQALGTLLVEADTGCDKLDLKRVFEALTAPSSPFLAKYWQRAPCFTSTSIPCLAQAWTMADMEEAIAKEFLLAGRGFFEENSETGGWKMAAVGLARGSSFEEAKLRPEDVRAALKQRSGTVVFNSVGGSVAALAGVCLDAVEAFRLPVALNLYMTAPGQSTSAPPHTDKQDVFVLQTQGRKRWRVLYMPAGFPHTTDTVVGMAEERDPSVHLTLGVDTHIWGLTHAALRDYFLYRLQPGPTATLPPPPPSTQTLPEAFVRFHAQLPLGLREAAAADAGTRWSALKQVLGAGVEAEFQAVMREIEDEHVLQRLEEEGAAEVLGEVVARLLDHHRSLTSVFRAMYSDVKYGLSDVTRDLSCLRSQPYYQNLETTMQALVDWAAPAPAGGRERERKMPGGQRRAKAASGGPRSSVHS 487 MRARRWWRVSCCALFLHVACSKAFLRPCPAVFNPPHSKHQDPQVPRLPGHCPLTTLPAATTANAPISTAPVVADQALGTLLVEADTGCDKLDLKRVFEALTAPSSPFLAKYWQRAPCFTSTSIPCLAQAWTMADMEEAIAKEFLLAGRGFFEENSETGGWKMAAVGLARGSSFEEAKLRPEDVRAALKQRSGTVVFNSVGGSVAALAGVCLDAVEAFRLPVALNLYMTAPGQSTSAPPHTDKQDVFVLQTQGRKRWRVLYMPAGFPHTTDTVVGMAEERDPSVHLTLGVDTHIWGLTHAALRDYFLYRLQPGPTATLPPPPPSTQTLPEAFVRFHAQLPLGLREAAAADAGTRWSALKQVLGAGVEAEFQAVMREIEDEHVLQRLEEEGAAEVLGEVVARLLDHHRSLTSVFRAMYSDVKYGLSDVTRDLSCLRSQPYYQNLETTMQALVDWAAPAPAGGRERERKMPGGQRRAKAASGGPRSSVHS Sbjct: 1 MRARRWWRVSCCALFLHVACSKAFLRPCPAVFNPPHSKHQDPQVPRLPGHCPLTTLPAATTANAPISTAPVVADQALGTLLVEADTGCDKLDLKRVFEALTAPSSPFLAKYWQRAPCFTSTSIPCLAQAWTMADMEEAIAKEFLLAGRGFFEENSETGGWKMAAVGLARGSSFEEAKLRPEDVRAALKQRSGTVVFNSVGGSVAALAGVCLDAVEAFRLPVALNLYMTAPGQSTSAPPHTDKQDVFVLQTQGRKRWRVLYMPAGFPHTTDTVVGMAEERDPSVHLTLGVDTHIWGLTHAALRDYFLYRLQPGPTATLPPPPPSTQTLPEAFVRFHAQLPLGLREAAAADAGTRWSALKQVLGAGVEAEFQAVMREIEDEHVLQRLEEEGAAEVLGEVVARLLDHHRSLTSVFRAMYSDVKYGLSDVTRDLSCLRSQPYYQNLETTMQALVDWAAPAPAGGRERERKMPGGQRRAKAASGGPRSSVHS 487
BLAST of EWM23319.1 vs. NCBI_GenBank
Match: gi|298711294|emb|CBJ26539.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 201.83 bits (512), Expect = 1.927e-55 Identity = 137/388 (35.31%), Postives = 197/388 (50.77%), Query Frame = 0 Query: 91 LDLKRVFEALTAPSSPFLAKYWQRAPCFTSTSIPCLAQAWTMADMEEAIAKEFLLAGRGFFEENSETGGWKMAAVGLARGSSFEEAKLRPEDVRAALKQRSGT-----VVFNSVGGSVAALAG----------VCLDAVEAFRLPVALNLYMTAPGQSTSAPPHTDKQDVFVLQTQGRKRWRVLYMPAGFPHTTDTVVGMA-EERDPSVHLTLGVDTHIWGLTHAALRDYFLYRLQPGPTATLPPPPPSTQTLPEAFVRFHAQLPLGLREAAAADAGTRWSALKQVLGAGVEAEFQAVMREIE----DEHVLQRLEEEGAAEVLGEVVARLLDHHRSLTSVFRAMYSDVKYGLSDVTRDLSCLRSQPYYQNLETTMQALVDWAAPAPA 458 L ++ +F A+ A F+ + WQ+ P F S+P LA +T+ D+++A+ +F+ AGRG F + S GW+MA V RG SFE+AKLR +DV++ALK++SGT VF A + LD + P AL + PGQ VL++PA F H DT M+ ++ DPSVHLT+GV THIWGL +A LR Y L R G + P + PE + R LPLG TRWS +K+ + + + R+++ DE V EE E + EV +L+DHH +T++F+ MY DV+YGL+DV +D LRS+PY +E TM LV+W + P+ Sbjct: 85 LGVEGIFSAM-ARDDVFVNELWQKKPFFCDASLPSLAGQYTLDDVQQAVDSDFVEAGRGTFSQGST--GWRMAPVSTPRGKSFEDAKLRFDDVKSALKEKSGTGRKRWRVFPPPPPQAKPKADPMARGKGADVLSLDEMIGDGKPGALVDVVLEPGQ-------------------------VLFVPARFSHPKDTATRMSQDDTDPSVHLTVGVYTHIWGLNYATLRSYSLSR--SGKQDGVKRPLEKSLGEPE-YWRLFTALPLGFLGERVTSGLTRWSQMKKAQVDEMMSTATRLERDLQPGRWDEGVAD--EEVLGGEKVQEVAQKLMDHHAKMTNIFKEMYGDVRYGLTDVPKDSCFLRSRPYLDLVERTMSQLVEWGSVRPS 439
BLAST of EWM23319.1 vs. NCBI_GenBank
Match: gi|922867712|gb|KOO34283.1| (cupin 4 family protein, partial [Chrysochromulina sp. CCMP291]) HSP 1 Score: 188.348 bits (477), Expect = 9.352e-51 Identity = 112/249 (44.98%), Postives = 143/249 (57.43%), Query Frame = 0 Query: 107 FLAKYWQRAPCFTSTSIPCLAQAWTMADMEEAIAKEFLLAGRGFFEENSETGGWKMAAVGLARGSSFEEAKLRPEDVRAALKQRSGTVVFNSVGGSVAALAGVCLDAVEAFRLPVALNLYMTAPGQSTSAPPHTDKQDVFVLQTQGRKRWRV-------------------------------------------LYMPAGFPHTTDTV---VGMAEERDPSVHLTLGVDTHIWGLTHAALRDYFLYRL 309 F + W R P +P +A+++T+ + A+ +FL AGRG E+ + GGWKMAAV RGSSFE+AK+R DV+ A++ GTVVFNS G ++ L +CL A++AF LP LNLY+TA G +TSAPPHTDKQDVFVLQ+ G KRWRV LY+PAGFPHTTDTV A + S+HLT+G+DTHIWGL +A LR L RL Sbjct: 37 FATETWARRPMLRR-DVPGVARSFTLEHLAAAVDGDFLDAGRGIAEDLGD-GGWKMAAVSQPRGSSFEDAKMRYVDVQKAMED--GTVVFNSAGAHISRLGSMCLAALDAFGLPNCLNLYVTAKGCATSAPPHTDKQDVFVLQSGGAKRWRVYTPPPPDAKPHADPLARGKAHDALRLDELAAPLLDVVLRPGDMLYVPAGFPHTTDTVHTAAAGAAADEDSIHLTIGLDTHIWGLDYAGLRRGALARL 281
BLAST of EWM23319.1 vs. NCBI_GenBank
Match: gi|219120835|ref|XP_002185649.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|209582498|gb|ACI65119.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 154.066 bits (388), Expect = 6.302e-37 Identity = 124/403 (30.77%), Postives = 176/403 (43.67%), Query Frame = 0 Query: 130 WTMADMEEAIAKEFLLAGRGFFEENSETGGWKMAAVGLARGSSFEEAKLRPEDVRAALKQRSGTVVFNSVGGSVAALAGVCLDAVEAFRLPVALNLYMTAPGQSTSAPPHTDKQDVFVLQTQGRKRWR------------------------------------------------VLYMPAGFPHTTDTVV--GMAEERDPSVHLTLGVDTHIWGLTHAALRDYFLYRLQPGPTA-------TLPPPPPSTQTLPEAFVRFHAQLPLGLREAAAADAGTRWSALKQVLGAGVEAEFQAVMREIEDEHVLQRLEEEGAAEVLGEVVARLLDHHRSLTSVFRAMY---------------------SDVKYGLS-DVTRDLSCLRSQPYYQNLETTMQALVDWA 453 +TM D+E+A++ +FL A RG GW++ V + RG SFEEA++ +DV+AAL++ GTV+FN+ G + LAG L E+ LP ALNLY+T G+ TSAPPHTDKQDV V+QT GRK W+ V+++PA FPHTT TV S+HLTLG+D HIW L + R L R TA P + + A+LPLGL G ++A + V AE + + RE+ DE + A V E V RL L + R MY V+ ++ + + LS R + Y+ ++ + +AL W+ Sbjct: 143 FTMKDLEKALSDDFLDAARG---STDNRKGWQITDVSVPRGQSFEEARMTFQDVQAALEK--GTVIFNAAGAHIPKLAGPSLACTESTLLPCALNLYVTDAGKRTSAPPHTDKQDVAVVQTSGRKHWKVYSPPNPAMKPTVDIFARGKGDDSLPLYILESDLGCQLLLETTLNPGDVMFVPAAFPHTTSTVTEDDSTHADKTSIHLTLGIDHHIWELDYLCCRRLALRRANVKDTALGQTGEEDSPYIGAANEVTAPLINDLFAELPLGLL------GGVDYAA---PVIEHVAAELERISREV-DETTASAV----GASVWREAVERLRTQGMELLDIHRDMYLAALEEGQIRDEEAAMTAHLGQAVRRAMTPERMQRLSLFRVKRYFDQIDASKKALQQWS 526
BLAST of EWM23319.1 vs. NCBI_GenBank
Match: gi|551549873|ref|XP_005762507.1| (hypothetical protein EMIHUDRAFT_216259 [Emiliania huxleyi CCMP1516] >gi|485611531|gb|EOD10078.1| hypothetical protein EMIHUDRAFT_216259 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 142.51 bits (358), Expect = 4.049e-35 Identity = 79/161 (49.07%), Postives = 100/161 (62.11%), Query Frame = 0 Query: 95 RVFEALTAPSSPFLAKYWQRAPCFTSTSIPCLAQAWTMADMEEAIAKEFLLAGRGFFEENSETGGWKMAAVGLARGSSFEEAKLRPEDVRAALKQRSGTVVFNSVGGSVAALAGVCLDAVEAFRLPVALNLYMTAPGQSTSAPPHTDKQDVFVLQTQGRKR 255 R FE L A + F+A W R P + I +A ++T+ D+ EA+ +FL AG G + GGWKMA V RGSS+E+AKLR DV A +++ GTVVFNS G V L +CL A+ AF LP LN+Y+T P SAPPHTDKQDVFVLQ G K+ Sbjct: 60 RAFEVL-ARDADFVADVWARKPLLVAEPIAGVAGSFTLDDVREAVDSDFLEAGLGV---PTAEGGWKMAPVSQPRGSSYEDAKLRYVDVAAGIER--GTVVFNSAGAHVPKLGAICLAALRAFGLPNCLNMYLTGPSVKQSAPPHTDKQDVFVLQMSGAKQ 214
BLAST of EWM23319.1 vs. NCBI_GenBank
Match: gi|1210523873|dbj|GAX17197.1| (hypothetical protein FisN_10Lh046 [Fistulifera solaris]) HSP 1 Score: 148.673 bits (374), Expect = 4.127e-35 Identity = 122/405 (30.12%), Postives = 174/405 (42.96%), Query Frame = 0 Query: 130 WTMADMEEAIAKEFLLAGRGFFEENSETGGWKMAAVGLARGSSFEEAKLRPEDVRAALKQRSGTVVFNSVGGSVAALAGVCLDAVEAFRLPVALNLYMTAPGQSTSAPPHTDKQDVFVLQTQGRKRWRV----------------------------------------------LYMPAGFPHTTDTVVGMAEERDPSVHLTLGVDTHIWGLTHAALR----------DYFLYRLQPGPTATLPPPPPSTQTLPEAFVRFHAQLPLGLREAAAADAGTRWSALKQVLGAGVEAEFQAVMREIEDEHVLQRLEEEGAAEVLGEVVARLLDHHRSLTSVFRAMY-SDVKYGLSDVTRD------------------------LSCLRSQPYYQNLETTMQALVDWA 453 +TM D+E+A+ +FL A RG + N GWK++ V RG SFEEA++ DV+AAL + GTV+ N+ G + LAG L +A LP A+NLY+TA + SAPPHTDKQDV V+QT GRKRW+V L+MPA FPHTT T+ E SVHLT G+D HIW L + + R D +L + + G P LP+A ++ D + S L + AE + + R + DE+ ++ + E + R+ L + R MY + ++ G TRD LS R + YY + + QAL +W+ Sbjct: 122 FTMNDLEKAVLDDFLDAARGSTDANK---GWKISGVSNPRGDSFEEARMTFADVQAALDK--GTVIMNAAGAHIPKLAGPSLACTDATSLPCAINLYVTAQSKPVSAPPHTDKQDVVVVQTAGRKRWKVYAPPDPSKKPHADIFARGKIDDMMPLYALEKDTELLIDTITNPGDILFMPAAFPHTTSTLDETVTE--TSVHLTFGIDHHIWELDYLSARRLALRRAGVIDTYLGQTKDGEN----PYVGKVNELPQAILKDLLA----ELPLGLLDDDEKASPLLE----KATAELERISRAV-DENTANSVD----PTIWKETIERVRQQGVELFEIHRDMYLAAIEEGR---TRDAEEAMTAHLNASPRRVMTPERMQRLSLFRVKRYYDKVNASKQALKEWS 499
BLAST of EWM23319.1 vs. NCBI_GenBank
Match: gi|1210519698|dbj|GAX21467.1| (hypothetical protein FisN_10Hh046 [Fistulifera solaris]) HSP 1 Score: 147.902 bits (372), Expect = 6.780e-35 Identity = 89/225 (39.56%), Postives = 117/225 (52.00%), Query Frame = 0 Query: 130 WTMADMEEAIAKEFLLAGRGFFEENSETGGWKMAAVGLARGSSFEEAKLRPEDVRAALKQRSGTVVFNSVGGSVAALAGVCLDAVEAFRLPVALNLYMTAPGQSTSAPPHTDKQDVFVLQTQGRKRWR----------------------------------------------VLYMPAGFPHTTDTVVGMAEERDPSVHLTLGVDTHIWGLTHAALRDYFLYR 308 +TM D+++A+ +FL A RG + N GWK++ V RG SFEEA++ DV+AAL++ GTV+ N+ G + LAG L +A LP A+NLY+TA + SAPPHTDKQDV V+QT GRKRW+ VL+MPA FPHTT T+ E SVHLT G+D HIW L + + R L R Sbjct: 121 FTMKDLQKAVLDDFLDAARGSTDANK---GWKISGVSNPRGDSFEEARMTFADVQAALEK--GTVIMNAAGAHIPKLAGPSLACTDATSLPCAINLYVTAQSKPVSAPPHTDKQDVVVVQTAGRKRWKVYAPPNPSKKPLADMFARGKIDDMMPLYALEKDTELLIDTITNPGDVLFMPAAFPHTTSTLDETVTE--TSVHLTFGIDHHIWELDYLSARRLALRR 338
BLAST of EWM23319.1 vs. NCBI_GenBank
Match: gi|397641977|gb|EJK74951.1| (hypothetical protein THAOC_03341 [Thalassiosira oceanica]) HSP 1 Score: 143.665 bits (361), Expect = 4.167e-33 Identity = 117/402 (29.10%), Postives = 170/402 (42.29%), Query Frame = 0 Query: 134 DMEEAIAKEFLLAGRGFFEENSETGGWKMAAVGLARGSSFEEAKLRPEDVRAALKQRSGTVVFNSVGGSVAALAGVCLDAVEAFRLPVALNLYMTAPGQSTSAPPHTDKQDVFVLQTQGRKRWR-----------------------------------------------------VLYMPAGFPHTTDTVVGMAEERDPSVHLTLGVDTHIWGLTHAALRDYFLYR-----LQPGPTATLPPPPPSTQTLPEAF-VRFHAQLPLGLREAAAADAGTRW--------SALKQVLGAGVEAEFQAVMREIEDEHVLQRLEEEGAAEVLGEVVARLLDHHRS----------LTSVFRAMYSDVKYGLSDVT-----RDLSCLRSQPYYQNLETTMQALVDWA 453 ++ A+ ++FL A G GW + AV + GSSFEEA++ E V++AL+ GTV+FN++G + LAG L +A LP A+N+Y TA G TSAPPHTD+QDV V+QT+G KRWR VLY+PAGFPHTTDTV + + S+HLT +DTH+W L + +R+ L R L P LP+ LPL +A + + S + +V G + +RE L+R+ G A +LD HR L + AM + V G + + LS R +P+++ L+ + L W+ Sbjct: 260 ELSTALEEDFLDAQVG---STDNRKGWTVNAVSMPSGSSFEEARMSLEQVKSALE--VGTVIFNNIGAHIPKLAGPTLACTDAMNLPGAVNMYCTARGMRTSAPPHTDRQDVVVVQTEGAKRWRVFTPPTDGNVKPSADPFARGKGEDSLPLHTLLEGKGSRLGSELLMDVVTREGDVLYIPAGFPHTTDTVEETDADYETSLHLTFNIDTHVWNLDNLNVRNIALKRAGYKDLLQSPRGEANLYTGKVNQLPQDLRSSMMDALPLNFLDADPSSYDDKLVNFVAGLCSDVSEVTGDSANTLTPSSIRE-----ALERIHSFGTA---------VLDIHRDMYLAAIEEGRLRTSEAAMTAHVSSGKKTLITPERMQRLSLFRVRPFFEQLDAAKKELAAWS 642
BLAST of EWM23319.1 vs. NCBI_GenBank
Match: gi|223993917|ref|XP_002286642.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220977957|gb|EED96283.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 136.346 bits (342), Expect = 1.479e-30 Identity = 82/233 (35.19%), Postives = 114/233 (48.93%), Query Frame = 0 Query: 138 AIAKEFLLAGRGFFEENSETGGWKMAAVGLARGSSFEEAKLRPEDVRAALKQRSGTVVFNSVGGSVAALAGVCLDAVEAFRLPVALNLYMTAPGQSTSAPPHTDKQDVFVLQTQGRKRWR-----------------------------------------------------VLYMPAGFPHTTDTV---------VGMAEERDPSVHLTLGVDTHIWGLTHAALRDYFLYR 308 A+ ++FL A RG GW+++AV GSSF++A++ V+ AL +GTV+FN++G + LAG L +A LP ALN+Y+TA G TSAPPHTD+QDV V+Q +G KRWR VL++PAGFPHTTDTV + E D S+HLT +DTH+W L + +R+ + R Sbjct: 291 ALEEDFLDAQRG---STDNRKGWQVSAVSQPTGSSFDDARMTLPQVQTALT--AGTVIFNNIGAHIPRLAGPTLACTDALSLPGALNMYVTAKGMRTSAPPHTDRQDVVVIQMEGAKRWRIFTPPTDGEVKPTADPFARGKGEDSLPLHTLLEGKEGRLGTELLMDVVSREGDVLFIPAGFPHTTDTVEETTADKTDSSVNTEYDTSIHLTFNIDTHVWDLDYLNVRNVAMRR 518
BLAST of EWM23319.1 vs. NCBI_GenBank
Match: gi|551561582|ref|XP_005767624.1| (hypothetical protein EMIHUDRAFT_245953 [Emiliania huxleyi CCMP1516] >gi|485618139|gb|EOD15195.1| hypothetical protein EMIHUDRAFT_245953 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 129.028 bits (323), Expect = 3.901e-28 Identity = 123/426 (28.87%), Postives = 173/426 (40.61%), Query Frame = 0 Query: 102 APSSPFLAKYWQRAPCFTSTSIPCLAQAWTMADMEEAIAKEFL-----LAGRGFFEENSETGGWKMAAV-------GLARGSSFEEAKLRPEDVRAALKQRSGTVVFNSVGGSVAALAGVCLDAVEAFRLPVALNLYMTAPGQSTSAPPHTDKQDVFVLQTQGRKRWRV-------------------------------------------LYMPAGFPHTTDTV---VGMAEERDPSVHLTLGVDTHIWGLTHAALRDYFLYRL-QPG---PTATLPP------PPPSTQTLPEAFVRFHAQLPLGLREAAAADAGTRWSALKQVLGAGVEAEFQAVMREIEDEHVLQRLEEEGAAEVLGEVVARLLDHHRSLTSVFRAMYSDVKYGLSDVTRD--LSCLRSQPYYQNLETTMQALVDWAAPAP 457 A S+ F+ K W + P T +A +TM D+ A L R ++ + +G W+ A G A S + LR ++V AL + G++V+N G + L +CL A+++F LPV NLY+T G +TSA PH+DKQ+V VLQ++G K WRV LY+PAGFPHTTDTV A + SVH+TLGV T++WGL++A R L R QP PTA P PS+ R H GL A+ RW + D V RL+ +++A+L H + S+ R M+ D LS R + Y + LE Q + W P Sbjct: 372 AASASFVHKEWGQTPVLYRTQ-QGIADIFTMDDLAVATDNNLLPFAQFFGRREGGDQLASSGVWRAAGADRGTGFYGFANVSLVQTKYLRFDEVEEALLK--GSIVYNCAGATHPKLGSLCLTAMDSFDLPVQANLYVTGKGIATSATPHSDKQNVLVLQSRGAKHWRVFAPPPPFAKPAADPLARGKLDDTLRTDELGEPLIDVVLKPGDCLYVPAGFPHTTDTVHVTGAGAAAAEASVHITLGVATNLWGLSYADARSGALSRTGQPDTLTPTALQPALYWLLMRAPSSLGFFRQHQREHEHACAGLVRASRLAETARWE-------------------NMSDAEVSSRLDAP-------QIIAQLERHRERIVSIHRKMHLGAVRHQRVAPSDPGLSIARVETYKKELEAAHQEHLQWFKSQP 768 The following BLAST results are available for this feature:
BLAST of EWM23319.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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