EWM23324.1, cds7364 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23324.1 vs. NCBI_GenBank
Match: gi|585104331|gb|EWM23324.1| (uncharacterized protein Naga_100053g34 [Nannochloropsis gaditana]) HSP 1 Score: 311.612 bits (797), Expect = 1.463e-107 Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0 Query: 1 MGLITMPVNMLLIICWCLALLFSTRTAEASRRPVCTLTPFICPAPGLYRQHNGRRRTLNLYWGVFGGSSSKKINPGKGSGEDPAKVRARIASCRVCNKKGAVNCPVCAGTGIDQKNGAIFERYKCLKCQGFGYVSCEACNPGGLTPEQRGER 152 MGLITMPVNMLLIICWCLALLFSTRTAEASRRPVCTLTPFICPAPGLYRQHNGRRRTLNLYWGVFGGSSSKKINPGKGSGEDPAKVRARIASCRVCNKKGAVNCPVCAGTGIDQKNGAIFERYKCLKCQGFGYVSCEACNPGGLTPEQRGER Sbjct: 1 MGLITMPVNMLLIICWCLALLFSTRTAEASRRPVCTLTPFICPAPGLYRQHNGRRRTLNLYWGVFGGSSSKKINPGKGSGEDPAKVRARIASCRVCNKKGAVNCPVCAGTGIDQKNGAIFERYKCLKCQGFGYVSCEACNPGGLTPEQRGER 152
BLAST of EWM23324.1 vs. NCBI_GenBank
Match: gi|1130672530|ref|XP_019708373.1| (PREDICTED: protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic [Elaeis guineensis]) HSP 1 Score: 92.0485 bits (227), Expect = 1.750e-21 Identity = 42/67 (62.69%), Postives = 49/67 (73.13%), Query Frame = 0 Query: 86 VRARIASCRVCNKKGAVNCPVCAGTGIDQKNGAIFERYKCLKCQGFGYVSCEACNPGGLTPEQRGER 152 ++A SCR C KGA+ CP C GTG ++KNG IFER+KC CQGFG SC +C GGLTPEQRGER Sbjct: 39 IKAVFNSCRTCQGKGAIECPGCKGTGKNKKNGNIFERWKCFDCQGFGLKSCPSCGKGGLTPEQRGER 105
BLAST of EWM23324.1 vs. NCBI_GenBank
Match: gi|672126111|ref|XP_008786495.1| (PREDICTED: protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic [Phoenix dactylifera]) HSP 1 Score: 91.2781 bits (225), Expect = 4.355e-21 Identity = 43/67 (64.18%), Postives = 49/67 (73.13%), Query Frame = 0 Query: 86 VRARIASCRVCNKKGAVNCPVCAGTGIDQKNGAIFERYKCLKCQGFGYVSCEACNPGGLTPEQRGER 152 ++A SCR C KGAV CP C GTG ++KNG IFER+KC +CQGFG SC C GGLTPEQRGER Sbjct: 39 IKAVFNSCRTCRGKGAVECPGCKGTGKNKKNGNIFERWKCFECQGFGMKSCPNCGKGGLTPEQRGER 105
BLAST of EWM23324.1 vs. NCBI_GenBank
Match: gi|514744163|ref|XP_004960564.1| (PREDICTED: protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic [Setaria italica]) HSP 1 Score: 90.5077 bits (223), Expect = 1.030e-20 Identity = 45/74 (60.81%), Postives = 53/74 (71.62%), Query Frame = 0 Query: 83 PAKVRARI----ASCRVCNKKGAVNCPVCAGTGIDQKNGAIFERYKCLKCQGFGYVSCEACNPGGLTPEQRGER 152 P+K AR+ A C+ C KGAV CP C GTG ++KNG IFER+KC +CQGFG SC +C GGLTPEQRGER Sbjct: 44 PSKRGARLMVSAAGCKTCKGKGAVECPGCKGTGKNKKNGNIFERWKCFECQGFGLKSCPSCGKGGLTPEQRGER 117
BLAST of EWM23324.1 vs. NCBI_GenBank
Match: gi|567148773|ref|XP_006416179.1| (hypothetical protein EUTSA_v10009125mg [Eutrema salsugineum] >gi|557093950|gb|ESQ34532.1| hypothetical protein EUTSA_v10009125mg [Eutrema salsugineum]) HSP 1 Score: 89.7373 bits (221), Expect = 2.884e-20 Identity = 46/89 (51.69%), Postives = 55/89 (61.80%), Query Frame = 0 Query: 64 VFGGSSSKKINPGKGSGEDPAKVRARIASCRVCNKKGAVNCPVCAGTGIDQKNGAIFERYKCLKCQGFGYVSCEACNPGGLTPEQRGER 152 V G S S K++ K + SC C KGA++CP C GTG ++KNG IFER+KC +CQGFG SC C GGLTPEQRGER Sbjct: 36 VLGRSDSIKVSAAKSGNFSLGSI---FKSCETCGAKGAIDCPGCKGTGKNKKNGNIFERWKCFECQGFGMKSCPKCGKGGLTPEQRGER 121
BLAST of EWM23324.1 vs. NCBI_GenBank
Match: gi|226506660|ref|NP_001144962.1| (uncharacterized protein LOC100278105 [Zea mays] >gi|195649213|gb|ACG44074.1| hypothetical protein [Zea mays] >gi|1142837591|gb|AQK95677.1| hypothetical protein ZEAMMB73_Zm00001d011093 [Zea mays]) HSP 1 Score: 89.3521 bits (220), Expect = 3.214e-20 Identity = 41/62 (66.13%), Postives = 46/62 (74.19%), Query Frame = 0 Query: 91 ASCRVCNKKGAVNCPVCAGTGIDQKNGAIFERYKCLKCQGFGYVSCEACNPGGLTPEQRGER 152 A+C+ C KGAV CP C GTG ++KNG IFER+KC CQGFG SC C GGLTPEQRGER Sbjct: 58 AACKTCKGKGAVECPGCKGTGKNKKNGNIFERWKCFDCQGFGLKSCPTCGKGGLTPEQRGER 119
BLAST of EWM23324.1 vs. NCBI_GenBank
Match: gi|1040820100|ref|XP_017242129.1| (PREDICTED: uncharacterized protein LOC108214569 isoform X1 [Daucus carota subsp. sativus] >gi|1021051025|gb|KZN08803.1| hypothetical protein DCAR_001459 [Daucus carota subsp. sativus]) HSP 1 Score: 89.3521 bits (220), Expect = 3.504e-20 Identity = 54/141 (38.30%), Postives = 71/141 (50.35%), Query Frame = 0 Query: 12 LIICWCLALLFSTRTAEASRRPVCTLTPFICPAPGLYRQHNGRRRTLNLYWGVFGGSSSKKINPGKGSGEDPAKVRARIASCRVCNKKGAVNCPVCAGTGIDQKNGAIFERYKCLKCQGFGYVSCEACNPGGLTPEQRGER 152 L +CW + F S+ + + C GL Q GR+R++ + GG +S I+ G C C KG + CP C GTG ++KNG IFER+KC +CQGFG C +C GGLTPEQRGER Sbjct: 4 LCVCWSSMVPFPAPPDHDSKHHLLNIMTTSC---GLDEQGAGRKRSVTVSAAKSGGFAS--ISKG----------------CSTCKGKGGIECPGCKGTGRNKKNGNIFERWKCYECQGFGLKGCPSCGKGGLTPEQRGER 123
BLAST of EWM23324.1 vs. NCBI_GenBank
Match: gi|242086547|ref|XP_002439106.1| (protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic isoform X2 [Sorghum bicolor] >gi|241944391|gb|EES17536.1| hypothetical protein SORBI_3009G004500 [Sorghum bicolor]) HSP 1 Score: 89.3521 bits (220), Expect = 4.351e-20 Identity = 40/60 (66.67%), Postives = 45/60 (75.00%), Query Frame = 0 Query: 93 CRVCNKKGAVNCPVCAGTGIDQKNGAIFERYKCLKCQGFGYVSCEACNPGGLTPEQRGER 152 C+ C KGAV CP C GTG ++KNG IFER+KC CQGFG +SC C GGLTPEQRGER Sbjct: 64 CKTCKGKGAVECPGCKGTGKNKKNGNIFERWKCFDCQGFGLMSCPTCGKGGLTPEQRGER 123
BLAST of EWM23324.1 vs. NCBI_GenBank
Match: gi|565493326|ref|XP_006304302.1| (hypothetical protein CARUB_v10010657mg [Capsella rubella] >gi|482573013|gb|EOA37200.1| hypothetical protein CARUB_v10010657mg [Capsella rubella]) HSP 1 Score: 88.1965 bits (217), Expect = 1.243e-19 Identity = 54/135 (40.00%), Postives = 69/135 (51.11%), Query Frame = 0 Query: 18 LALLFSTRTAEASRRPVCTLTPFICPAPGLYRQHNGRRRTLNLYWGVFGGSSSKKINPGKGSGEDPAKVRARIASCRVCNKKGAVNCPVCAGTGIDQKNGAIFERYKCLKCQGFGYVSCEACNPGGLTPEQRGER 152 + LL S+ + E + P+C C L + R + V G S K++ GK + SC C KGA+ CP C GTG ++KNG +FER+KC CQGFG SC C GGLTPEQRGER Sbjct: 3 MLLLISSYSFEMLKAPLC------CSELSLEHKILAFERQI-----VSGRRDSIKVSAGKIGNFSFGSI---FKSCETCGAKGAIECPGCKGTGKNKKNGNMFERWKCFDCQGFGMKSCPKCGKGGLTPEQRGER 123
BLAST of EWM23324.1 vs. NCBI_GenBank
Match: gi|1002856145|ref|XP_015692939.1| (PREDICTED: protein EMBRYO SAC DEVELOPMENT ARREST 3, chloroplastic isoform X2 [Oryza brachyantha]) HSP 1 Score: 87.4261 bits (215), Expect = 1.369e-19 Identity = 43/69 (62.32%), Postives = 50/69 (72.46%), Query Frame = 0 Query: 84 AKVRARIASCRVCNKKGAVNCPVCAGTGIDQKNGAIFERYKCLKCQGFGYVSCEACNPGGLTPEQRGER 152 AKV+ A C+ C KGA+ CP C GTG ++KNG IFER+KC CQGFG SC +C GGLTPEQRGER Sbjct: 34 AKVKVS-AGCKTCRGKGAIECPGCKGTGRNKKNGNIFERWKCFDCQGFGLKSCPSCGKGGLTPEQRGER 101 The following BLAST results are available for this feature:
BLAST of EWM23324.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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