EWM23308.1, cds7348 (CDS) Nannochloropsis gaditana

Overview
NameEWM23308.1
Unique Namecds7348
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002471.1:421583..421946 +
Alignment locationCM002471.1:422095..422099 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23308.1
ProductTautomerase
Orig transcript idgnl|cribi|Naga_100053g19.5048.mrna
GbkeyCDS
Noteencoded by transcript variant 1; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:421583..421946 +
CM002471.1supercontigCM002471.1:422095..422099 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR014347Tautomerase/MIF_sf
IPR001398Macrophage_inhib_fac
Homology
BLAST of EWM23308.1 vs. NCBI_GenBank
Match: gi|585104315|gb|EWM23308.1| (Tautomerase [Nannochloropsis gaditana] >gi|585104316|gb|EWM23309.1| Tautomerase [Nannochloropsis gaditana])

HSP 1 Score: 249.21 bits (635), Expect = 8.277e-84
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0
Query:    1 MPFVNIRTSAQLDASGVKAVTDAAHNAIRDVLNKPDQYIAVDVTVSPNLQFGGTKAPAAMISVHSIGYGANAKANKEALLKALGTAMKAAGDVPGDRLFVSFEDVHKDFWGFNGQLFSTIFG 122
            MPFVNIRTSAQLDASGVKAVTDAAHNAIRDVLNKPDQYIAVDVTVSPNLQFGGTKAPAAMISVHSIGYGANAKANKEALLKALGTAMKAAGDVPGDRLFVSFEDVHKDFWGFNGQLFSTIFG
Sbjct:    1 MPFVNIRTSAQLDASGVKAVTDAAHNAIRDVLNKPDQYIAVDVTVSPNLQFGGTKAPAAMISVHSIGYGANAKANKEALLKALGTAMKAAGDVPGDRLFVSFEDVHKDFWGFNGQLFSTIFG 122          
BLAST of EWM23308.1 vs. NCBI_GenBank
Match: gi|1074929923|ref|WP_070073073.1| (hypothetical protein [Acidihalobacter prosperus] >gi|1073977814|gb|AOV17525.1| hypothetical protein BJI67_11035 [Acidihalobacter prosperus])

HSP 1 Score: 81.6481 bits (200), Expect = 1.326e-17
Identity = 40/117 (34.19%), Postives = 66/117 (56.41%), Query Frame = 0
Query:    1 MPFVNIRTSAQLDASGVKAVTDAAHNAIRDVLNKPDQYIAVDVTVSPNLQFGGTKAPAAMISVHSIGYGANAKANKEALLKALGTAMKAAGDVPGDRLFVSFEDVHKDFWGFNGQLF 117
            MP ++I  +  L+ASGV+A+   +   +  +L KP+ Y+ V    +P+L+FGG + PAA + +HSIG      A  + L +AL   ++    +PG R ++ FE+V    WG +G  F
Sbjct:    1 MPLLSIEINRSLEASGVEALLTESSALVAGLLGKPESYMMVRHQYNPDLRFGGQEGPAAHLELHSIGL---PDAMTQDLSQALCKLIERHAGIPGSRTYILFENVPGQLWGHDGTTF 114          
BLAST of EWM23308.1 vs. NCBI_GenBank
Match: gi|515934983|ref|WP_017365566.1| (hypothetical protein [Methylococcus capsulatus])

HSP 1 Score: 77.411 bits (189), Expect = 5.539e-16
Identity = 38/117 (32.48%), Postives = 65/117 (55.56%), Query Frame = 0
Query:    1 MPFVNIRTSAQLDASGVKAVTDAAHNAIRDVLNKPDQYIAVDVTVSPNLQFGGTKAPAAMISVHSIGYGANAKANKEALLKALGTAMKAAGDVPGDRLFVSFEDVHKDFWGFNGQLF 117
            MP++ I  + +L+    KA+  AA   +   L KP++Y+ V++T +P + F GT  PAA + + SIG  A      +AL + L + ++ +  +   R+++ F DV   FWG+NG  F
Sbjct:    1 MPYLKIHMNRELEPGKSKALLAAASQRMASELGKPERYVMVELTSNPAMLFAGTDEPAAFVELKSIGLPAG---KTKALSQTLCSLLQDSAGIAPARVYIEFTDVAGGFWGWNGSTF 114          
BLAST of EWM23308.1 vs. NCBI_GenBank
Match: gi|499264603|ref|WP_010961996.1| (hypothetical protein [Methylococcus capsulatus] >gi|53756802|gb|AAU91093.1| putative phenylpyruvate tautomerase [Methylococcus capsulatus str. Bath])

HSP 1 Score: 76.2554 bits (186), Expect = 1.534e-15
Identity = 37/117 (31.62%), Postives = 65/117 (55.56%), Query Frame = 0
Query:    1 MPFVNIRTSAQLDASGVKAVTDAAHNAIRDVLNKPDQYIAVDVTVSPNLQFGGTKAPAAMISVHSIGYGANAKANKEALLKALGTAMKAAGDVPGDRLFVSFEDVHKDFWGFNGQLF 117
            MP++ I  + +++    KA+  AA   +   L KP++Y+ V++T +P + F GT  PAA + + SIG  A      +AL + L + ++ +  +   R+++ F DV   FWG+NG  F
Sbjct:    1 MPYLKIHMNREIEPGKSKALLAAASQRMASELGKPERYVMVELTSNPAMLFAGTDEPAAFVELKSIGLPAG---KTKALSQTLCSLLQDSAGIAPARVYIEFTDVAGGFWGWNGSTF 114          
BLAST of EWM23308.1 vs. NCBI_GenBank
Match: gi|740248567|ref|WP_038089501.1| (hypothetical protein [Acidihalobacter prosperus] >gi|1040016896|gb|OBS09933.1| hypothetical protein Thpro_020983 [Acidihalobacter prosperus])

HSP 1 Score: 75.0998 bits (183), Expect = 3.458e-15
Identity = 39/114 (34.21%), Postives = 60/114 (52.63%), Query Frame = 0
Query:    1 MPFVNIRTSAQLDASGVKAVTDAAHNAIRDVLNKPDQYIAVDVTVSPNLQFGGTKAPAAMISVHSIGYGANAKANKEALLKALGTAMKAAGDVPGDRLFVSFEDVHKDFWGFNG 114
            MP ++I  S  L+A  + A+   A   +  +L KP+ Y+ V    +P ++ GG  AP A+I + SIG    A A    L KAL   ++    +PG R+++ F DV +  WG NG
Sbjct:    1 MPLLSIEISLALEAPAIDALLGEASGLVAGLLGKPESYMMVRHQYNPAMRLGGHDAPLALIELRSIGLPETAPAE---LSKALCALLERHAGIPGTRVYLLFADVPRARWGHNG 111          
BLAST of EWM23308.1 vs. NCBI_GenBank
Match: gi|516837020|ref|WP_018123543.1| (hypothetical protein [Desulfovibrio oxyclinae])

HSP 1 Score: 74.7146 bits (182), Expect = 5.651e-15
Identity = 37/117 (31.62%), Postives = 64/117 (54.70%), Query Frame = 0
Query:    1 MPFVNIRTSAQLDASGVKAVTDAAHNAIRDVLNKPDQYIAVDVTVSPNLQFGGTKAPAAMISVHSIGYGANAKANKEALLKALGTAMKAAGDVPGDRLFVSFEDVHKDFWGFNGQLF 117
            MPFVN+ T+ +LD   +     A    I D+L KP+ Y+   +     L FGG+   AA + + SIG      A+   L + L T +++A D+P DR++++F D+ +  +G++ + F
Sbjct:    1 MPFVNVTTNIELDKQRLDETLGALSRFISDILGKPESYVMAQMQPGAQLVFGGSADAAAYVQLASIGLPTEKTAD---LSRELCTFLESALDIPSDRVYIAFADLERTMFGWDKRTF 114          
BLAST of EWM23308.1 vs. NCBI_GenBank
Match: gi|524149308|emb|CCZ21858.1| (macrophage migration inhibitory factor (MIF) [Acetobacter sp. CAG:977])

HSP 1 Score: 74.3294 bits (181), Expect = 9.572e-15
Identity = 38/117 (32.48%), Postives = 62/117 (52.99%), Query Frame = 0
Query:    1 MPFVNIRTSAQLDASGVKAVTDAAHNAIRDVLNKPDQYIAVDVTVSPNLQFGGTKAPAAMISVHSIGYGANAKANKEALLKALGTAMKAAGDVPGDRLFVSFEDVHKDFWGFNGQLF 117
            MPF+ I+T+  LD +  + V + A   I     KP+++I V+V    +L FG   APA  + + S+G    ++     L KAL   +++   VPG+R+++ F  V    WG+NG  F
Sbjct:    1 MPFLLIKTNIPLDKTMRETVLNQASTVIARTTGKPEKFIMVNVCSGEDLLFGAKSAPAVYMEMKSVGL---SQGLVPVLSKALTEMIESRLQVPGNRIYIEFSSVPGHMWGYNGTTF 114          
BLAST of EWM23308.1 vs. NCBI_GenBank
Match: gi|302757057|ref|XP_002961952.1| (hypothetical protein SELMODRAFT_76736 [Selaginella moellendorffii] >gi|302775436|ref|XP_002971135.1| hypothetical protein SELMODRAFT_147673 [Selaginella moellendorffii] >gi|300161117|gb|EFJ27733.1| hypothetical protein SELMODRAFT_147673 [Selaginella moellendorffii] >gi|300170611|gb|EFJ37212.1| hypothetical protein SELMODRAFT_76736 [Selaginella moellendorffii])

HSP 1 Score: 73.9442 bits (180), Expect = 1.273e-14
Identity = 41/117 (35.04%), Postives = 64/117 (54.70%), Query Frame = 0
Query:    1 MPFVNIRTSAQLDASGVKAVTDAAHNAIRDVLNKPDQYIAVDVTVSPNLQFGGTKAPAAMISVHSIGYGANAKANKEALLKALGTAMKAAGDVPGDRLFVSFEDVHKDFWGFNGQLF 117
            MP +N+ T+   D+     +   A  A+  ++ KP+QY+ + +  S  + FGGT+ PAA   V SIG G     NKE L +AL   +++   VP  R ++ F DV + F+G+NG  F
Sbjct:    1 MPTLNLSTNVPADSIVSSDILKDASKAVSRIIGKPEQYVMIVLKDSVPMSFGGTEEPAAYGEVISIG-GLGPSVNKE-LSEALSEILESKLSVPPSRFYIKFYDVQRSFFGWNGSTF 115          
BLAST of EWM23308.1 vs. NCBI_GenBank
Match: gi|1037116812|emb|SBT09039.1| (putative phenylpyruvate tautomerase [Candidatus Propionivibrio aalborgensis])

HSP 1 Score: 73.559 bits (179), Expect = 1.398e-14
Identity = 41/119 (34.45%), Postives = 64/119 (53.78%), Query Frame = 0
Query:    1 MPFVNIRTSAQLDASGVKAVTDAAHNAIRDVLNKPDQYIAVDVTVSPNLQFGGTKAPAAMISVHSIGY--GANAKANKEALLKALGTAMKAAGDVPGDRLFVSFEDVHKDFWGFNGQLF 117
            MP + I+T+  LDA   K +   A  A+  +L KP++Y+ V +  +  + FGG  +P A + + SIG   G  A+ +K AL K + TA+     V  DR+++ F D     WG+NG  F
Sbjct:    1 MPLLKIQTNVILDAEAGKTLVADASRAVAAMLGKPERYVLVSLESAATMAFGGDSSPLAYLEMKSIGLPQGRTAEFSK-ALCKLMSTAL----GVSADRVYIEFADAQGSMWGWNGGTF 114          
BLAST of EWM23308.1 vs. NCBI_GenBank
Match: gi|551330684|ref|WP_022950126.1| (hypothetical protein [Methylohalobius crimeensis])

HSP 1 Score: 73.559 bits (179), Expect = 1.575e-14
Identity = 35/117 (29.91%), Postives = 64/117 (54.70%), Query Frame = 0
Query:    1 MPFVNIRTSAQLDASGVKAVTDAAHNAIRDVLNKPDQYIAVDVTVSPNLQFGGTKAPAAMISVHSIGYGANAKANKEALLKALGTAMKAAGDVPGDRLFVSFEDVHKDFWGFNGQLF 117
            MP++ + T+ +L +   +++   A   + D L KP++++ V V    +L FGGT  PAA + + SIG   N     E L + +   ++A  ++P DR++V   D+ + +WG+N   F
Sbjct:    1 MPYLRVETNLELSSDKRESILKEASAQLVDKLGKPERFVMVQVVGGADLIFGGTSDPAAYVELKSIGLPEN---QTEPLSRFVCEFLQAQLNIPPDRVYVELIDIPRKYWGWNNGTF 114          
The following BLAST results are available for this feature:
BLAST of EWM23308.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585104315|gb|EWM23308.1|8.277e-84100.00Tautomerase [Nannochloropsis gaditana] >gi|5851043... [more]
gi|1074929923|ref|WP_070073073.1|1.326e-1734.19hypothetical protein [Acidihalobacter prosperus] >... [more]
gi|515934983|ref|WP_017365566.1|5.539e-1632.48hypothetical protein [Methylococcus capsulatus][more]
gi|499264603|ref|WP_010961996.1|1.534e-1531.62hypothetical protein [Methylococcus capsulatus] >g... [more]
gi|740248567|ref|WP_038089501.1|3.458e-1534.21hypothetical protein [Acidihalobacter prosperus] >... [more]
gi|516837020|ref|WP_018123543.1|5.651e-1531.62hypothetical protein [Desulfovibrio oxyclinae][more]
gi|524149308|emb|CCZ21858.1|9.572e-1532.48macrophage migration inhibitory factor (MIF) [Acet... [more]
gi|302757057|ref|XP_002961952.1|1.273e-1435.04hypothetical protein SELMODRAFT_76736 [Selaginella... [more]
gi|1037116812|emb|SBT09039.1|1.398e-1434.45putative phenylpyruvate tautomerase [Candidatus Pr... [more]
gi|551330684|ref|WP_022950126.1|1.575e-1429.91hypothetical protein [Methylohalobius crimeensis][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7365rna7365Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications