EWM23341.1, cds7333 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23341.1 vs. NCBI_GenBank
Match: gi|553194499|ref|XP_005855971.1| (tpr repeat-containing protein [Nannochloropsis gaditana CCMP526] >gi|422293079|gb|EKU20380.1| tpr repeat-containing protein [Nannochloropsis gaditana CCMP526] >gi|585104348|gb|EWM23341.1| tetratricopeptide tpr_1 repeat-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 853.588 bits (2204), Expect = 0.000e+0 Identity = 414/414 (100.00%), Postives = 414/414 (100.00%), Query Frame = 0
Query: 1 MHTPSHVKLSVAICAMSVLFPVQDVSAFLTPAASGHRNPPLAPRSPTSDPTALAVSTEGDPDRCKIRNDVEQQFNRKDAVRSLNAWTLGATAGATWAALTMGGSRANSPSVPDLAPMAASSSDGPVEGAVVRKSVPELRFEMLKKGLDLTHAFQFEEAEDVYTELIGLFDSDYTSLSDQEKQLVAKAFSNRGNVRCSLTRVSEALLDYSRSIELCPDTAEYWTNRGLAFEVIADALLATREKDAFQFYETAIADYEHALVMDPENHRLYLNAGDVLTRTRRHDLALEYYRRALALFPMSPASRGKVALLEVENGNVGRGMYMLESINRRNPDFAEMLLASAALDWTLGRFVEGVDSYREAVSRDPRLFDDSYLKMDCHWPPTMLKMLDKLREAGTIEGLRSTAVSWFDSRGDII 414
MHTPSHVKLSVAICAMSVLFPVQDVSAFLTPAASGHRNPPLAPRSPTSDPTALAVSTEGDPDRCKIRNDVEQQFNRKDAVRSLNAWTLGATAGATWAALTMGGSRANSPSVPDLAPMAASSSDGPVEGAVVRKSVPELRFEMLKKGLDLTHAFQFEEAEDVYTELIGLFDSDYTSLSDQEKQLVAKAFSNRGNVRCSLTRVSEALLDYSRSIELCPDTAEYWTNRGLAFEVIADALLATREKDAFQFYETAIADYEHALVMDPENHRLYLNAGDVLTRTRRHDLALEYYRRALALFPMSPASRGKVALLEVENGNVGRGMYMLESINRRNPDFAEMLLASAALDWTLGRFVEGVDSYREAVSRDPRLFDDSYLKMDCHWPPTMLKMLDKLREAGTIEGLRSTAVSWFDSRGDII
Sbjct: 1 MHTPSHVKLSVAICAMSVLFPVQDVSAFLTPAASGHRNPPLAPRSPTSDPTALAVSTEGDPDRCKIRNDVEQQFNRKDAVRSLNAWTLGATAGATWAALTMGGSRANSPSVPDLAPMAASSSDGPVEGAVVRKSVPELRFEMLKKGLDLTHAFQFEEAEDVYTELIGLFDSDYTSLSDQEKQLVAKAFSNRGNVRCSLTRVSEALLDYSRSIELCPDTAEYWTNRGLAFEVIADALLATREKDAFQFYETAIADYEHALVMDPENHRLYLNAGDVLTRTRRHDLALEYYRRALALFPMSPASRGKVALLEVENGNVGRGMYMLESINRRNPDFAEMLLASAALDWTLGRFVEGVDSYREAVSRDPRLFDDSYLKMDCHWPPTMLKMLDKLREAGTIEGLRSTAVSWFDSRGDII 414
BLAST of EWM23341.1 vs. NCBI_GenBank
Match: gi|585104349|gb|EWM23342.1| (tetratricopeptide tpr_1 repeat-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 677.552 bits (1747), Expect = 0.000e+0 Identity = 329/329 (100.00%), Postives = 329/329 (100.00%), Query Frame = 0
Query: 1 MHTPSHVKLSVAICAMSVLFPVQDVSAFLTPAASGHRNPPLAPRSPTSDPTALAVSTEGDPDRCKIRNDVEQQFNRKDAVRSLNAWTLGATAGATWAALTMGGSRANSPSVPDLAPMAASSSDGPVEGAVVRKSVPELRFEMLKKGLDLTHAFQFEEAEDVYTELIGLFDSDYTSLSDQEKQLVAKAFSNRGNVRCSLTRVSEALLDYSRSIELCPDTAEYWTNRGLAFEVIADALLATREKDAFQFYETAIADYEHALVMDPENHRLYLNAGDVLTRTRRHDLALEYYRRALALFPMSPASRGKVALLEVENGNVGRGMYMLESINRR 329
MHTPSHVKLSVAICAMSVLFPVQDVSAFLTPAASGHRNPPLAPRSPTSDPTALAVSTEGDPDRCKIRNDVEQQFNRKDAVRSLNAWTLGATAGATWAALTMGGSRANSPSVPDLAPMAASSSDGPVEGAVVRKSVPELRFEMLKKGLDLTHAFQFEEAEDVYTELIGLFDSDYTSLSDQEKQLVAKAFSNRGNVRCSLTRVSEALLDYSRSIELCPDTAEYWTNRGLAFEVIADALLATREKDAFQFYETAIADYEHALVMDPENHRLYLNAGDVLTRTRRHDLALEYYRRALALFPMSPASRGKVALLEVENGNVGRGMYMLESINRR
Sbjct: 1 MHTPSHVKLSVAICAMSVLFPVQDVSAFLTPAASGHRNPPLAPRSPTSDPTALAVSTEGDPDRCKIRNDVEQQFNRKDAVRSLNAWTLGATAGATWAALTMGGSRANSPSVPDLAPMAASSSDGPVEGAVVRKSVPELRFEMLKKGLDLTHAFQFEEAEDVYTELIGLFDSDYTSLSDQEKQLVAKAFSNRGNVRCSLTRVSEALLDYSRSIELCPDTAEYWTNRGLAFEVIADALLATREKDAFQFYETAIADYEHALVMDPENHRLYLNAGDVLTRTRRHDLALEYYRRALALFPMSPASRGKVALLEVENGNVGRGMYMLESINRR 329
BLAST of EWM23341.1 vs. NCBI_GenBank
Match: gi|873232409|emb|CEM05563.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 213.772 bits (543), Expect = 1.409e-61 Identity = 106/256 (41.41%), Postives = 166/256 (64.84%), Query Frame = 0
Query: 139 RFEMLKKGLDLTHAFQFEEAEDVYTELIGLFDSDYTSLSDQEKQLVAKAFSNRGNVRCSLTRVSEALLDYSRSIELCPDTAEYWTNRGLAFEVIADALLATREKDAFQFYETAIADYEHALVMDPENHRLYLNAGDVLTRTRRHDLALEYYRRALALFPMSPASRGKVALLEVENGNVGRGMYMLESINRRNPDFAEMLLASAALDWTLGRFVEGVDSYREAVSRDPRLFDDSYLKMDCHWPPTMLKMLDKLREAG 394
++ + K GL+ T F F+EAE ++TE+I +++ S++ + ++A+A+++RGN R SL +++AL+DYS +IE PD A++W NR +A E A+ L + + A Q+Y+ A+ DYEHALV+ P + RLY N G++LT D ALE +R+A AL P + A + ++ALL+ + G+V R +++ I RR+PD+ EM+LA + LDW +GRF EG Y +V +P L DD +L D WPP ++ L LR AG
Sbjct: 141 QYSLFKAGLEETAKFDFKEAEGIFTEIIDSYETPKAKESERARFMLARAYTDRGNTRVSLGELNKALVDYSCAIEYAPDEADFWLNRAIACEQKAEQSLTSSLQFANQWYKEALEDYEHALVLKPSDPRLYANTGEILTLLEDFDAALEKFRQASALAPSNVAYKARIALLDAQLGDVRRSHFIINDIVRRSPDYWEMVLAKSMLDWNVGRFAEGAYLYDISVQENPLLLDDRHLVRDLRWPPYFVEGLRNLRMAG 396
BLAST of EWM23341.1 vs. NCBI_GenBank
Match: gi|298705617|emb|CBJ28868.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 137.117 bits (344), Expect = 3.299e-33 Identity = 73/169 (43.20%), Postives = 115/169 (68.05%), Query Frame = 0
Query: 137 ELRFEMLKKGLDLTHAFQFEEAEDVYTELIGLFDS-DYTSLSDQEKQLVAKAFSNRGNVRCSLTRVSEALLDYSRSIELCPDTAEYWTNRGLAFEVIAD-ALLATREKD---AFQFYETAIADYEHALVMDPENHRLYLNAGDVLTRTRRHDLALEYYRRALALFPMSP 300
E+++E+ K+G++L F AE +TE+I F+S ++ + + K L+A+A+SNRGN R SL + EA+LDYS SI+L P+ E+W RG+AFE +AD +LA +++ A FYE+A+ADY+HA+V+DP++ R+Y++ GD T + AL+ Y RA+ L PM+P
Sbjct: 149 EMQYELFKRGMELEDDDDFVGAERQWTEIIENFNSPNFRATNPGNKVLLARAYSNRGNTRLSLQKTREAILDYSESIDLVPEKGEFWLARGVAFEDMADRKVLARADRNVEVARTFYESALADYDHAVVLDPQDPRVYISRGDANTLLGQGRDALDNYIRAVNLSPMTP 317
BLAST of EWM23341.1 vs. NCBI_GenBank
Match: gi|1011334912|ref|WP_062249099.1| (hypothetical protein [Fischerella sp. NIES-3754]) HSP 1 Score: 129.028 bits (323), Expect = 4.942e-31 Identity = 84/274 (30.66%), Postives = 135/274 (49.27%), Query Frame = 0
Query: 124 GPVEGAVVRKSVPELRFEMLKKGLDL-------THAFQFEEAEDVYTELIGLFDSDYTSLSDQEKQLVAKAFSNRGNVRCSLTRVSEALLDYSRSIELCPDTAEYWTNRGLAFEVIADALLATREKDAFQFYETAIADYEHALVMDPENHRLYLNAGDVLTRTRRHDLALEYYRRALALFPMSPASRGKVALLEVENGNVGRGMYMLESINRRNPDFAEMLLASAALDWTLGRFVEGVDSYREAVSRDPRLFDDSYLKMDCHWPPTMLKMLDKL 390
G + A+ + P+ E ++K +L T F +AE +TE+I F + A +SNRGN R S ++ +AL D++++IEL PD A+ + NRG A E + +E AIADY H L ++P + Y N G R + A+ Y++A+A+ P +RG AL+ ENG + + + +++I R+ P+FA+ A A W G+ E ++ A DPR D +++K WPP+M+ LDK
Sbjct: 15 GWNQAAIAQPQTPKFTPEEIQKWDNLAKSAFAATSKGDFAKAEQYWTEIIERFPDN------------AAIWSNRGNSRVSQNKLPQALADFNKAIELAPDVADPYLNRGTALEGLGR-------------WEEAIADYNHVLEVNPNDAMAYNNRGTAKAGLGRWEEAIADYQKAMAIAPNLVIARGNYALVLYENGKIDQAIREMKNIVRKYPNFADTRAALTAALWVNGQKGEAESNWVAAYGLDPRYKDINWVKNIRRWPPSMVAALDKF 263
BLAST of EWM23341.1 vs. NCBI_GenBank
Match: gi|515390322|ref|WP_016879735.1| (hypothetical protein [Chlorogloeopsis fritschii]) HSP 1 Score: 129.028 bits (323), Expect = 5.115e-31 Identity = 86/274 (31.39%), Postives = 132/274 (48.18%), Query Frame = 0
Query: 124 GPVEGAVVRKSVPELRFEMLKKGLDLTHAF-------QFEEAEDVYTELIGLFDSDYTSLSDQEKQLVAKAFSNRGNVRCSLTRVSEALLDYSRSIELCPDTAEYWTNRGLAFEVIADALLATREKDAFQFYETAIADYEHALVMDPENHRLYLNAGDVLTRTRRHDLALEYYRRALALFPMSPASRGKVALLEVENGNVGRGMYMLESINRRNPDFAEMLLASAALDWTLGRFVEGVDSYREAVSRDPRLFDDSYLKMDCHWPPTMLKMLDKL 390
G E + + P + E L+KG +LT A F AE +TE+I F + +SNRGN R S ++ EAL D++++IEL PD + + NRG A E + +E AIADY+ L +DP++ Y N G R + A+ Y++A+AL P +RG AL+ E G + + +++I R+ P+FA+ A A W G+ E ++ A DPR D +++K WPP+M+ LDK
Sbjct: 16 GWAEAVMAQSQKPNITQEQLRKGDELTRAAFAATSKGDFATAEKYWTEIIEQFPDN------------PAIWSNRGNSRVSQNKLQEALADFNKAIELAPDITDPYLNRGTALEGLGR-------------WEEAIADYDRILEIDPQDAMAYNNRGTAEVGLERWEDAIADYKKAMALAPNLVIARGNYALVLYETGQIEPAIREMKNIVRKYPNFADTRAALTAALWVNGQKGEAESNWVAASGLDPRYKDINWVKNIRRWPPSMVTALDKF 264
BLAST of EWM23341.1 vs. NCBI_GenBank
Match: gi|965689051|dbj|BAU08193.1| (hypothetical protein FIS3754_41350 [Fischerella sp. NIES-3754]) HSP 1 Score: 129.413 bits (324), Expect = 1.321e-30 Identity = 84/274 (30.66%), Postives = 135/274 (49.27%), Query Frame = 0
Query: 124 GPVEGAVVRKSVPELRFEMLKKGLDL-------THAFQFEEAEDVYTELIGLFDSDYTSLSDQEKQLVAKAFSNRGNVRCSLTRVSEALLDYSRSIELCPDTAEYWTNRGLAFEVIADALLATREKDAFQFYETAIADYEHALVMDPENHRLYLNAGDVLTRTRRHDLALEYYRRALALFPMSPASRGKVALLEVENGNVGRGMYMLESINRRNPDFAEMLLASAALDWTLGRFVEGVDSYREAVSRDPRLFDDSYLKMDCHWPPTMLKMLDKL 390
G + A+ + P+ E ++K +L T F +AE +TE+I F + A +SNRGN R S ++ +AL D++++IEL PD A+ + NRG A E + +E AIADY H L ++P + Y N G R + A+ Y++A+A+ P +RG AL+ ENG + + + +++I R+ P+FA+ A A W G+ E ++ A DPR D +++K WPP+M+ LDK
Sbjct: 61 GWNQAAIAQPQTPKFTPEEIQKWDNLAKSAFAATSKGDFAKAEQYWTEIIERFPDN------------AAIWSNRGNSRVSQNKLPQALADFNKAIELAPDVADPYLNRGTALEGLGR-------------WEEAIADYNHVLEVNPNDAMAYNNRGTAKAGLGRWEEAIADYQKAMAIAPNLVIARGNYALVLYENGKIDQAIREMKNIVRKYPNFADTRAALTAALWVNGQKGEAESNWVAAYGLDPRYKDINWVKNIRRWPPSMVAALDKF 309
BLAST of EWM23341.1 vs. NCBI_GenBank
Match: gi|1121230925|ref|WP_073554773.1| (hypothetical protein [Fischerella major] >gi|1115251939|gb|OKH16443.1| hypothetical protein NIES592_02030 [Fischerella major NIES-592]) HSP 1 Score: 127.102 bits (318), Expect = 2.881e-30 Identity = 83/274 (30.29%), Postives = 134/274 (48.91%), Query Frame = 0
Query: 124 GPVEGAVVRKSVPELRFEMLKKGLDL-------THAFQFEEAEDVYTELIGLFDSDYTSLSDQEKQLVAKAFSNRGNVRCSLTRVSEALLDYSRSIELCPDTAEYWTNRGLAFEVIADALLATREKDAFQFYETAIADYEHALVMDPENHRLYLNAGDVLTRTRRHDLALEYYRRALALFPMSPASRGKVALLEVENGNVGRGMYMLESINRRNPDFAEMLLASAALDWTLGRFVEGVDSYREAVSRDPRLFDDSYLKMDCHWPPTMLKMLDKL 390
G + A+ + P+ E ++K +L T F +AE +TE+I F + A +SNRGN R S ++ +AL D++++IEL PD A+ + NRG A E + +E AIADY H L ++P + Y N G R + A+ Y++A+A+ P +RG AL+ E G + + + +++I R+ P+FA+ A A W G+ E ++ A DPR D +++K WPP+M+ LDK
Sbjct: 15 GWNQAAIAQPQTPKFTPEEIQKWDNLAKSAFAATSKGDFAKAEQYWTEIIERFPDN------------AAIWSNRGNSRVSQNKLPQALADFNKAIELAPDVADPYLNRGTALEGLGR-------------WEEAIADYNHVLEVNPNDAMAYNNRGTAKAGLGRWEQAIADYQKAMAIAPNLVIARGNYALVLYETGKIDQAIREMKNIVRKYPNFADTRAALTAALWVNGQKGEAESNWVAAYGLDPRYKDINWVKNIRRWPPSMVAALDKF 263
BLAST of EWM23341.1 vs. NCBI_GenBank
Match: gi|1213736029|gb|OWY68686.1| (hypothetical protein B7486_25045 [cyanobacterium TDX16]) HSP 1 Score: 125.561 bits (314), Expect = 1.224e-29 Identity = 84/276 (30.43%), Postives = 133/276 (48.19%), Query Frame = 0
Query: 124 GPVEGAVVRKSVPELRFEMLK-------KGLDLTHAFQFEEAEDVYTELIGLFDSDYTSLSDQEKQLVAKAFSNRGNVRCSLTRVSEALLDYSRSIELCPDTAEYWTNRGLAFEVIADALLATREKDAFQFYETAIADYEHALVMDPENHRLYLNAGDVLTRTRRHDLALEYYRRALALFPMSPASRGKVALLEVENGNVGRGMYMLESINRRNPDFAEMLLASAALDWTLGRFVEGVDSYREAVSRDPRLFDDSYLKMDCHWPPTMLKMLDKLRE 392
G VE AV + P L E L+ + LT F +AE +T++I F ++ A A+SNRGN R S +++EA+ DY+++IEL P + + NRG A E + +E AIADY H L +DP + Y N G+ + + A+ Y+++ P +R AL+ ++G + + L +I R+ P FA++ A A W G E ++ AV DPR D +++K WPPTM+ L+K ++
Sbjct: 17 GWVEPAVAQSPPPNLSAEQLQNLEKLANEAFVLTEKGNFPQAESYWTQIIEEFPTN------------AAAWSNRGNSRVSQNKLNEAIADYNKAIELAPGVTDPFLNRGAALEGLGK-------------WEEAIADYNHILEIDPNDAMAYNNRGNAEAGLGQWEKAIADYKKSADTAPNFAFARANYALVLYQDGQKDKALRELRNIIRKYPQFADVRAALTATLWEQGNQGEAESNWVAAVGLDPRYKDINWVKKIRRWPPTMVAALEKFQQ 267
BLAST of EWM23341.1 vs. NCBI_GenBank
Match: gi|493681356|ref|WP_006631530.1| (hypothetical protein [Microcoleus vaginatus] >gi|333461947|gb|EGK90552.1| Tetratricopeptide TPR_1 repeat-containing protein [Microcoleus vaginatus FGP-2]) HSP 1 Score: 124.79 bits (312), Expect = 2.083e-29 Identity = 79/250 (31.60%), Postives = 119/250 (47.60%), Query Frame = 0
Query: 141 EMLKKGLDLTHAFQFEEAEDVYTELIGLFDSDYTSLSDQEKQLVAKAFSNRGNVRCSLTRVSEALLDYSRSIELCPDTAEYWTNRGLAFEVIADALLATREKDAFQFYETAIADYEHALVMDPENHRLYLNAGDVLTRTRRHDLALEYYRRALALFPMSPASRGKVALLEVENGNVGRGMYMLESINRRNPDFAEMLLASAALDWTLGRFVEGVDSYREAVSRDPRLFDDSYLKMDCHWPPTMLKMLDKL 390
E+++K + T+ +F AE +T++I F S A A+SNRGN R S ++ A+ DY R+IEL PD + + NRG A E + +E AIADY H L +DP++ Y N G+ + + A+ Y +A L P +R AL +NG + +++I RR P FA+M A +A W G+ E ++ AV D R D ++ WPP + LDK
Sbjct: 44 ELVQKAFEATNEGKFPAAETFWTQIIDKFPSQ------------AAAWSNRGNSRVSQNKLQAAISDYERAIELAPDAPDPYLNRGTALEGLGR-------------WEEAIADYNHVLELDPKDPAAYNNRGNAEAGLGKWEQAIADYSKAFELAPEYAFARANHALALYQNGQTKEAIRNMKNIVRRYPQFADMRAALSACLWEAGKRGEAESNWVAAVGLDSRYKDIDWVAHTRRWPPVAVSALDKF 268 The following BLAST results are available for this feature:
BLAST of EWM23341.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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