EWM23386.1, cds7288 (CDS) Nannochloropsis gaditana

Overview
NameEWM23386.1
Unique Namecds7288
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002471.1:293669..294226 -

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Properties
Property NameValue
Protein idEWM23386.1
ProductVRR-NUC domain protein
Partialtrue
Orig transcript idgnl|cribi|Naga_100189g1.10207.mrna
GbkeyCDS
End range.
End range294226
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:293669..294226 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0016788hydrolase activity, acting on ester bonds
Vocabulary: INTERPRO
TermDefinition
IPR014883VRR_NUC
Homology
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BLAST of EWM23386.1 vs. NCBI_GenBank
Match: gi|585104398|gb|EWM23386.1| (VRR-NUC domain protein, partial [Nannochloropsis gaditana])

HSP 1 Score: 351.288 bits (900), Expect = 3.910e-122
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0 
Query:    1 SSASMERDGPESLCVQLVERENEAWREGCGRREGRKPGAGREEEGTDGREEEGWERRAGGGGSREGGLCEVEEISQTWGRSFMRSFQPGASRREGEGGEGEEEEEEEDPSIEVKLVEVKSKNDFLSPHQEAWICELLRDEKGWNAEGGGEAGREGGRKGGREAGAKGGTAAPPTTSFELCHVRSV 185
            SSASMERDGPESLCVQLVERENEAWREGCGRREGRKPGAGREEEGTDGREEEGWERRAGGGGSREGGLCEVEEISQTWGRSFMRSFQPGASRREGEGGEGEEEEEEEDPSIEVKLVEVKSKNDFLSPHQEAWICELLRDEKGWNAEGGGEAGREGGRKGGREAGAKGGTAAPPTTSFELCHVRSV
Sbjct:    1 SSASMERDGPESLCVQLVERENEAWREGCGRREGRKPGAGREEEGTDGREEEGWERRAGGGGSREGGLCEVEEISQTWGRSFMRSFQPGASRREGEGGEGEEEEEEEDPSIEVKLVEVKSKNDFLSPHQEAWICELLRDEKGWNAEGGGEAGREGGRKGGREAGAKGGTAAPPTTSFELCHVRSV 185
The following BLAST results are available for this feature:
BLAST of EWM23386.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585104398|gb|EWM23386.1|3.910e-122100.00VRR-NUC domain protein, partial [Nannochloropsis g... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7305rna7305Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications