EWM23388.1, cds7285 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM23388.1 vs. NCBI_GenBank
Match: gi|585104400|gb|EWM23388.1| (hypothetical protein Naga_100189g4 [Nannochloropsis gaditana]) HSP 1 Score: 434.876 bits (1117), Expect = 3.939e-154 Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0 Query: 1 MSQLFNMRVIASLLLLAAVCNAFQAPIVSRGRSRQAPQMLGNFFKTAAPSAATPGQGKVGAKAGKGGSRLNLKSIPKEAPPAPKKLASIAAGITPGGPKVPSFPFKLGRTKEAKEATARVVNGKLEGYFTNEQLQALEVARREVPSSAASYWQKIASKVPGQTAETCKAMTNQLLLDKARGTGKNFFGGYVEVKETKMVVDTEATVGKRLKAAFGLK 217 MSQLFNMRVIASLLLLAAVCNAFQAPIVSRGRSRQAPQMLGNFFKTAAPSAATPGQGKVGAKAGKGGSRLNLKSIPKEAPPAPKKLASIAAGITPGGPKVPSFPFKLGRTKEAKEATARVVNGKLEGYFTNEQLQALEVARREVPSSAASYWQKIASKVPGQTAETCKAMTNQLLLDKARGTGKNFFGGYVEVKETKMVVDTEATVGKRLKAAFGLK Sbjct: 1 MSQLFNMRVIASLLLLAAVCNAFQAPIVSRGRSRQAPQMLGNFFKTAAPSAATPGQGKVGAKAGKGGSRLNLKSIPKEAPPAPKKLASIAAGITPGGPKVPSFPFKLGRTKEAKEATARVVNGKLEGYFTNEQLQALEVARREVPSSAASYWQKIASKVPGQTAETCKAMTNQLLLDKARGTGKNFFGGYVEVKETKMVVDTEATVGKRLKAAFGLK 217
BLAST of EWM23388.1 vs. NCBI_GenBank
Match: gi|299473443|emb|CBN77840.1| (expressed unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 87.4261 bits (215), Expect = 1.082e-17 Identity = 44/103 (42.72%), Postives = 62/103 (60.19%), Query Frame = 0 Query: 114 KEATARVVNGKLEGYFTNEQLQALEVARREVPS-SAASYWQKIASKVPGQTAETCKAMTNQLLLDKARGTGKNFFGGYVEVKETKMVVDTEATVGKRLKAAFG 215 +E + + K EG FT Q +A + AR+EVPS +YW+KIA++VPGQ A CK + +L + A GT N+FGGY+E ET VD EA + ++ FG Sbjct: 103 RERSRKASTRKSEGVFTPPQFEAFKKARKEVPSGKGDAYWEKIAARVPGQNAAACKRVAESMLFEAAVGTKSNYFGGYIETIETPDYVDPEADIMFKINKLFG 205
BLAST of EWM23388.1 vs. NCBI_GenBank
Match: gi|873230551|emb|CEM10753.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 71.633 bits (174), Expect = 9.062e-12 Identity = 35/72 (48.61%), Postives = 45/72 (62.50%), Query Frame = 0 Query: 129 FTNEQLQALEVARREVPSSAASYWQKIASKVPGQTAETCKAMTNQLLLDKARGTGKNFFGGYVEVKETKMVV 200 + Q+ ALE ARREVPS A YW +IA +VPG+TA C+ L ++A GT KNFF + VKE +M V Sbjct: 99 WEKNQIIALETARREVPSGAFLYWDQIAERVPGKTATQCEDYVRTQLFNRAAGTNKNFFKEQIFVKEPEMKV 170 The following BLAST results are available for this feature:
BLAST of EWM23388.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|