EWM23392.1, cds7279 (CDS) Nannochloropsis gaditana

Overview
NameEWM23392.1
Unique Namecds7279
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002471.1:270354..274016 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM23392.1
Productrna-binding protein
Orig transcript idgnl|cribi|Naga_100189g10.10213.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:270354..274016 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0003723RNA binding
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold
IPR011989ARM-like
IPR001313Pumilio_RNA-bd_rpt
Homology
BLAST of EWM23392.1 vs. NCBI_GenBank
Match: gi|585104404|gb|EWM23392.1| (rna-binding protein [Nannochloropsis gaditana])

HSP 1 Score: 2455.25 bits (6362), Expect = 0.000e+0
Identity = 1220/1220 (100.00%), Postives = 1220/1220 (100.00%), Query Frame = 0
Query:    1 MGGDVPVGIESSHHSSVTSLERESDRDSEQQLSPMGRTGQERNDCDSPEYHLHKAQRDSMSSGENKGSPPFSLLYKGEGGEKGGGGSRSPNETSPETSTSATSSLFGSNSASGSGSDSDGEGSGNSNAGFKAGEAPVGSSGSGSHPHGHASGPRPSFSTPSPSPADFLLGHATPPGSRGKGGGGSGSPLLDGPFGADLFGGFHATSEREGHRPQPTEGKEVIAPQRRSNSLSPPLPALSVHEAQSVFGSTGGLRPGAPLTPGGLSRRARDKGFHSTPGDGGLGAGREGDGTGMFDFEKMEYELAGLARRGERRPEPGSSEQDGRGETPRQTSEAMSNGGRGRTFASFAPAESPTEGLRHANNYASSSASSPSPSPSPSSLASSRSSPSPNSSSSTIQPMAFSGSGDVRAEASPLGMAAGSPYLLQQPGFPFGSVTAPGDGLQGYIQSAASPASGARASSSPRPGRTEEGAGMVFAYGPHSPLAPDNRVFGPPGGATLPTQVHIPVGAEGPVAMFPAAFEQQQQQLQQHQTTAVGNGLPTHLMTTAGLMPLSQIIALHQQHQFQQQQQQRDKGGAALPANLPFSHMTRGMGKTAGGSGNFNGAAHGNHAGATLDNMGHGGSDFPVLVAGNTSVHPEGSSHPAMLLHPTRQRQVGESQNPQRASFGRTGANLNAHDTSGSPSTASPTRNLDPYDVLYYGGTGPEVRQGLGGLYGSGGGTRRGGGRDRNDRRGFGGSLNGTGNNGGATLGGGSSAANLSGLLANLGSLGGGMAGLGLESLLLNGVSSPALKKRVERDPDILAALASATPSLEEILKSSTVQSLSQDQVGCRFLQLKLDEAGAEAATIIFQQAKPCMAEMMTDPFGNYLFQKILDKTSEQERATILSLVQDELVSGALNLHGTRSVQRILEVCRTKDQVATITAALRHDVVRLCVDANGNHVIQRALQHLGSEDRAFIFEAVSQACLEVSTHRHGCCVMQRCLDAATPLQRRALVVEIGRNCLQLMQDPYGNYVVQYVLDRCAADEIRPVTSCPLGRITSLSVQKYSSNVVEKCLEKASEDIQSAYIDEMCAPGNIKHLMQDQYANYVVQRALSVATHSRGLHLVEAVRPHLHAMRNTAGGRRILSKITKRFPNVDLGADMMAGGGAGGTVGNSGGPGGYVSGMNNGHGSMHHPGHMHALHGSGHPPPVQHHPHHQHSHPHLGFHQHRSNQPQAHFGGHHSGFR 1220
            MGGDVPVGIESSHHSSVTSLERESDRDSEQQLSPMGRTGQERNDCDSPEYHLHKAQRDSMSSGENKGSPPFSLLYKGEGGEKGGGGSRSPNETSPETSTSATSSLFGSNSASGSGSDSDGEGSGNSNAGFKAGEAPVGSSGSGSHPHGHASGPRPSFSTPSPSPADFLLGHATPPGSRGKGGGGSGSPLLDGPFGADLFGGFHATSEREGHRPQPTEGKEVIAPQRRSNSLSPPLPALSVHEAQSVFGSTGGLRPGAPLTPGGLSRRARDKGFHSTPGDGGLGAGREGDGTGMFDFEKMEYELAGLARRGERRPEPGSSEQDGRGETPRQTSEAMSNGGRGRTFASFAPAESPTEGLRHANNYASSSASSPSPSPSPSSLASSRSSPSPNSSSSTIQPMAFSGSGDVRAEASPLGMAAGSPYLLQQPGFPFGSVTAPGDGLQGYIQSAASPASGARASSSPRPGRTEEGAGMVFAYGPHSPLAPDNRVFGPPGGATLPTQVHIPVGAEGPVAMFPAAFEQQQQQLQQHQTTAVGNGLPTHLMTTAGLMPLSQIIALHQQHQFQQQQQQRDKGGAALPANLPFSHMTRGMGKTAGGSGNFNGAAHGNHAGATLDNMGHGGSDFPVLVAGNTSVHPEGSSHPAMLLHPTRQRQVGESQNPQRASFGRTGANLNAHDTSGSPSTASPTRNLDPYDVLYYGGTGPEVRQGLGGLYGSGGGTRRGGGRDRNDRRGFGGSLNGTGNNGGATLGGGSSAANLSGLLANLGSLGGGMAGLGLESLLLNGVSSPALKKRVERDPDILAALASATPSLEEILKSSTVQSLSQDQVGCRFLQLKLDEAGAEAATIIFQQAKPCMAEMMTDPFGNYLFQKILDKTSEQERATILSLVQDELVSGALNLHGTRSVQRILEVCRTKDQVATITAALRHDVVRLCVDANGNHVIQRALQHLGSEDRAFIFEAVSQACLEVSTHRHGCCVMQRCLDAATPLQRRALVVEIGRNCLQLMQDPYGNYVVQYVLDRCAADEIRPVTSCPLGRITSLSVQKYSSNVVEKCLEKASEDIQSAYIDEMCAPGNIKHLMQDQYANYVVQRALSVATHSRGLHLVEAVRPHLHAMRNTAGGRRILSKITKRFPNVDLGADMMAGGGAGGTVGNSGGPGGYVSGMNNGHGSMHHPGHMHALHGSGHPPPVQHHPHHQHSHPHLGFHQHRSNQPQAHFGGHHSGFR
Sbjct:    1 MGGDVPVGIESSHHSSVTSLERESDRDSEQQLSPMGRTGQERNDCDSPEYHLHKAQRDSMSSGENKGSPPFSLLYKGEGGEKGGGGSRSPNETSPETSTSATSSLFGSNSASGSGSDSDGEGSGNSNAGFKAGEAPVGSSGSGSHPHGHASGPRPSFSTPSPSPADFLLGHATPPGSRGKGGGGSGSPLLDGPFGADLFGGFHATSEREGHRPQPTEGKEVIAPQRRSNSLSPPLPALSVHEAQSVFGSTGGLRPGAPLTPGGLSRRARDKGFHSTPGDGGLGAGREGDGTGMFDFEKMEYELAGLARRGERRPEPGSSEQDGRGETPRQTSEAMSNGGRGRTFASFAPAESPTEGLRHANNYASSSASSPSPSPSPSSLASSRSSPSPNSSSSTIQPMAFSGSGDVRAEASPLGMAAGSPYLLQQPGFPFGSVTAPGDGLQGYIQSAASPASGARASSSPRPGRTEEGAGMVFAYGPHSPLAPDNRVFGPPGGATLPTQVHIPVGAEGPVAMFPAAFEQQQQQLQQHQTTAVGNGLPTHLMTTAGLMPLSQIIALHQQHQFQQQQQQRDKGGAALPANLPFSHMTRGMGKTAGGSGNFNGAAHGNHAGATLDNMGHGGSDFPVLVAGNTSVHPEGSSHPAMLLHPTRQRQVGESQNPQRASFGRTGANLNAHDTSGSPSTASPTRNLDPYDVLYYGGTGPEVRQGLGGLYGSGGGTRRGGGRDRNDRRGFGGSLNGTGNNGGATLGGGSSAANLSGLLANLGSLGGGMAGLGLESLLLNGVSSPALKKRVERDPDILAALASATPSLEEILKSSTVQSLSQDQVGCRFLQLKLDEAGAEAATIIFQQAKPCMAEMMTDPFGNYLFQKILDKTSEQERATILSLVQDELVSGALNLHGTRSVQRILEVCRTKDQVATITAALRHDVVRLCVDANGNHVIQRALQHLGSEDRAFIFEAVSQACLEVSTHRHGCCVMQRCLDAATPLQRRALVVEIGRNCLQLMQDPYGNYVVQYVLDRCAADEIRPVTSCPLGRITSLSVQKYSSNVVEKCLEKASEDIQSAYIDEMCAPGNIKHLMQDQYANYVVQRALSVATHSRGLHLVEAVRPHLHAMRNTAGGRRILSKITKRFPNVDLGADMMAGGGAGGTVGNSGGPGGYVSGMNNGHGSMHHPGHMHALHGSGHPPPVQHHPHHQHSHPHLGFHQHRSNQPQAHFGGHHSGFR 1220          
BLAST of EWM23392.1 vs. NCBI_GenBank
Match: gi|298709331|emb|CBJ31267.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 388.267 bits (996), Expect = 3.317e-116
Identity = 184/365 (50.41%), Postives = 255/365 (69.86%), Query Frame = 0
Query:  788 KKRVERDPDILAALASATPSLEEILKSSTVQSLSQDQVGCRFLQLKLDE---------AGAE-----AATIIFQQAKPCMAEMMTDPFGNYLFQKILDKTSEQERATILSLVQDELVSGALNLHGTRSVQRILEVCRTKDQVATITAALRHDVVRLCVDANGNHVIQRALQHLGSEDRAFIFEAVSQACLEVSTHRHGCCVMQRCLDAATPLQRRALVVEIGRNCLQLMQDPYGNYVVQYVLDRCAADEIRPVTSCPLGRITSLSVQKYSSNVVEKCLEKASEDIQSAYIDEMCAPGNIKHLMQDQYANYVVQRALSVATHSRGLHLVEAVRPHLHAMRNTAGGRRILSKITKRFPNVDLGADMM 1138
            +KR++R+ D+ A L +  P+L+++L    V S+S+DQVGCR LQ KLDE         AG E     A + IF +A P ++ MM DPFGNYLFQK+  K  + +R   +  V D +   A+NLHGTR VQ+++E+CRT  Q A I  +L   VV+L +D NGNHV+QRALQH+ +    F+ EA++ + ++V+ HRHGCCV+QRCLDAA P  R  L+ E+ RN L+LMQDP+GNYVVQYVL  C+ +E   + S PLG + SLS QK+SSNV+E CLE+A  ++QS +++E+   G I+ L+ DQYANYVVQRAL+VA +  GL LV A+RPHLH+M++T+ GRRI +KI KR+P VDLG +++
Sbjct:  361 RKRLDRESDMAALLEATRPALKDVL--GKVYSMSRDQVGCRLLQQKLDECPDRPPEGDAGKEPSEDDAVSAIFMEALPNLSMMMIDPFGNYLFQKLFVKVDDHQRLLAVEAVTDRMPEAAVNLHGTRCVQKVVELCRTDAQAAVIARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITASLVQVAIHRHGCCVLQRCLDAAGPNLRIKLIEEVARNGLRLMQDPFGNYVVQYVLKTCSREETYMLCSAPLGHVASLSTQKFSSNVMEACLERALPEVQSKFVEELAQQGRIRELILDQYANYVVQRALTVANNEEGLKLVNAIRPHLHSMQSTSSGRRIAAKIIKRYPTVDLGEEIL 723          
BLAST of EWM23392.1 vs. NCBI_GenBank
Match: gi|1173936746|gb|OQR87640.1| (hypothetical protein ACHHYP_08412 [Achlya hypogyna])

HSP 1 Score: 363.999 bits (933), Expect = 8.435e-109
Identity = 179/350 (51.14%), Postives = 249/350 (71.14%), Query Frame = 0
Query:  791 VERDPDILAALASATPSLEEILKSSTVQSLSQDQVGCRFLQLKLDEAGA-EAATIIFQQAKPCMAEMMTDPFGNYLFQKILDKTSEQERATILSLVQDELVSGALNLHGTRSVQRILEVCRTKDQVATITA-ALRHDVVRLCVDANGNHVIQRALQHLGSEDRAFIFEAVSQACLEVSTHRHGCCVMQRCLDAATPLQRRALVVEIGRNCLQLMQDPYGNYVVQYVLDRCAADEIRPVTSCPLGRITSLSVQKYSSNVVEKCLEKASEDIQSAYIDEMCAPGNIKHLMQDQYANYVVQRALSVATHSRGLHLVEAVRPHLHAMRNTAGGRRILSKITKRFPN-VDLGADM 1137
            VE  P +L   A+ T ++E++     V ++S+DQ GCR LQ +LD  G  +   +I+ +A P + +MM DPFGNYLFQK+L++ ++ +R  I+  V   LV+ ALNLHGTRSVQ+++EVC T   +ATI   ALR D VRLC+D+NGNHVIQRALQ L ++   F+F+AV+  C  V THRHGCCV+QRC+DAA   Q+RA++ ++  + ++LMQDPYGNYVVQYVLD C  DE   + +   G +  LSVQK+SSNVVEKCLE A  +++ A++ E+ A   +  ++QDQ+ANYVVQRALSVA+    L LV A++PHL AM+NT+GGRRI ++I KRFP+ V++  D+
Sbjct:  238 VEAPPSLLDFGANVTLAVEDL--QGRVYAMSKDQNGCRLLQEQLDCVGRPDLCDVIYTEALPHLVDMMVDPFGNYLFQKLLERVADDQRLEIVKRVSPHLVAAALNLHGTRSVQKVVEVCATDRTLATIIVKALRGDAVRLCIDSNGNHVIQRALQFLPADFNQFVFDAVATDCTVVGTHRHGCCVLQRCVDAANEAQKRAVISQVELHAMKLMQDPYGNYVVQYVLDACPNDETVGLMAKCAGHVYELSVQKFSSNVVEKCLELAPYELRQAFVREIIASPRMHRMLQDQFANYVVQRALSVASDELCLDLVHAIQPHLPAMKNTSGGRRIQARILKRFPHMVEMAMDL 585          
BLAST of EWM23392.1 vs. NCBI_GenBank
Match: gi|698816756|ref|XP_009841407.1| (hypothetical protein H257_15109 [Aphanomyces astaci] >gi|574103614|gb|ETV69154.1| hypothetical protein H257_15109 [Aphanomyces astaci])

HSP 1 Score: 365.925 bits (938), Expect = 3.391e-108
Identity = 171/330 (51.82%), Postives = 234/330 (70.91%), Query Frame = 0
Query:  817 VQSLSQDQVGCRFLQLKLD-------EAGAEAATIIFQQAKPCMAEMMTDPFGNYLFQKILDKTSEQERATILSLVQDELVSGALNLHGTRSVQRILEVCRTKDQVAT---ITAALRHDVVRLCVDANGNHVIQRALQHLGSEDRAFIFEAVSQACLEVSTHRHGCCVMQRCLDAATPLQRRALVVEIGRNCLQLMQDPYGNYVVQYVLDRCAADEIRPVTSCPLGRITSLSVQKYSSNVVEKCLEKASEDIQSAYIDEMCAPGNIKHLMQDQYANYVVQRALSVATHSRGLHLVEAVRPHLHAMRNTAGGRRILSKITKRFPNVDLGAD 1136
            V ++S+DQ GCR LQ +LD       ++ A+   +I+ ++ P + +MM DPFGNYLFQK+LD+  + +R  I+  V   LV+ ALNLHGTRSVQ+++E+       +    I  AL+ D VRLC+D+NGNHVIQRALQ L      F+F+AV+  C  V THRHGCCV+QRC+DAA P+QRRA++ ++  + ++LMQDPYGNYVVQYVLD C+A + R V +  +G +  LS+QK+SSNVVEKCLE A +D++   + E+ A   +  ++QDQYANYVVQRALSVA+    L LV A+RPHL +M+NT GGRRI ++I KRFP+VD+G D
Sbjct:  345 VFAMSKDQNGCRLLQEQLDSTDSEPGKSAADVCAVIYTESLPHLVDMMVDPFGNYLFQKLLDRGDDDQRLGIVQQVAPHLVAAALNLHGTRSVQKVVELAAASSSSSLVALIVGALKDDAVRLCIDSNGNHVIQRALQFLPPASNQFVFDAVAADCTVVGTHRHGCCVLQRCVDAADPVQRRAVIAQVEHHAMKLMQDPYGNYVVQYVLDACSAADARGVMAKCVGHVLDLSIQKFSSNVVEKCLELAPDDLRQTIVREIVASPRMYRMLQDQYANYVVQRALSVASDDNCLDLVAAIRPHLASMKNTQGGRRIQARILKRFPHVDVGWD 674          
BLAST of EWM23392.1 vs. NCBI_GenBank
Match: gi|673040669|ref|XP_008874295.1| (hypothetical protein H310_09878 [Aphanomyces invadans] >gi|574470037|gb|ETV97049.1| hypothetical protein H310_09878 [Aphanomyces invadans])

HSP 1 Score: 362.844 bits (930), Expect = 7.865e-107
Identity = 174/347 (50.14%), Postives = 241/347 (69.45%), Query Frame = 0
Query:  817 VQSLSQDQVGCRFLQLKLDEA---------GAEAATIIFQQAKPCMAEMMTDPFGNYLFQKILDKTSEQERATILSLVQDELVSGALNLHGTRSVQRILEVCRTKDQ---VATITAALRHDVVRLCVDANGNHVIQRALQHLGSEDRAFIFEAVSQACLEVSTHRHGCCVMQRCLDAATPLQRRALVVEIGRNCLQLMQDPYGNYVVQYVLDRCA-ADEIRPVTSCPLGRITSLSVQKYSSNVVEKCLEKASEDIQSAYIDEMCAPGNIKHLMQDQYANYVVQRALSVATHSRGLHLVEAVRPHLHAMRNTAGGRRILSKITKRFPNVDLG-----ADMMAGGGAGG 1145
            V ++S+DQ GCR LQ +LD +           +   +I+ ++ P + +MM DPFGNYLFQK+L+  +E +R  I+  V   LV+ ALNLHGTRSVQ+++E+C +      V  I  AL+ D VRLC+D+NGNHVIQRALQ++ +    F+F+AVS  C  V THRHGCCV+QRC+DAA P QRR ++ ++ ++ ++LMQDPYGNYVVQYVLD C+ AD +  +T C +G +  LS+QK+SSNV+EKCLE A + +   ++ E+ A   +  ++QDQYANYVVQRALSVA+    L LV A+RPHL +M+NT GGRRI ++I KRFP++D+G     AD+ AG  A G
Sbjct:  363 VFAMSKDQNGCRLLQEQLDNSVDQVHHPRTATDLCDVIYTESLPHLVDMMVDPFGNYLFQKLLECGTESQRFAIVQQVAHHLVAAALNLHGTRSVQKVVEICSSSSMPQLVELIVDALKDDAVRLCIDSNGNHVIQRALQYMPATYNQFVFDAVSAECTVVGTHRHGCCVLQRCVDAANPAQRREVIAQVEKHAMKLMQDPYGNYVVQYVLDACSTADVVGVMTKC-VGHVLELSIQKFSSNVIEKCLELAPDYLCQTFVREIIASPRMHRMLQDQYANYVVQRALSVASDENCLDLVTAMRPHLTSMKNTQGGRRIQARILKRFPHLDVGWDPDFADLAAGSPATG 708          
BLAST of EWM23392.1 vs. NCBI_GenBank
Match: gi|669148602|ref|XP_008609863.1| (hypothetical protein SDRG_05899 [Saprolegnia diclina VS20] >gi|530738200|gb|EQC36442.1| hypothetical protein SDRG_05899 [Saprolegnia diclina VS20])

HSP 1 Score: 359.377 bits (921), Expect = 9.244e-107
Identity = 169/316 (53.48%), Postives = 234/316 (74.05%), Query Frame = 0
Query:  817 VQSLSQDQVGCRFLQLKLDEAGAEAATIIFQQAKPCMAEMMTDPFGNYLFQKILDKTSEQERATILSLVQDELVSGALNLHGTRSVQRILEVCRTKDQVAT-ITAALRHDVVRLCVDANGNHVIQRALQHLGSEDRAFIFEAVSQACLEVSTHRHGCCVMQRCLDAATPLQRRALVVEIGRNCLQLMQDPYGNYVVQYVLDRCAADEIRPVTSCPLGRITSLSVQKYSSNVVEKCLEKASEDIQSAYIDEMCAPGNIKHLMQDQYANYVVQRALSVATHSRGLHLVEAVRPHLHAMRNTAGGRRILSKITKRFPNV 1131
            V ++S+DQ GCR LQ +LD   ++   +I+ +A P + +MM DPFGNYLFQK+L++ S+ +R  I+  V   LV+ ALNLHGTRSVQ+++EVC T   +A+ I +AL  D VRLC+D+NGNHVIQRALQ L +E   F+F+AV+  C  V THRHGCCV+QRC+DAA   Q+RA++ ++ R+ ++LMQDPYGNYVVQYVLD C +DE   V +  +G +  LSVQK+SSNVVEKCLE A  +++  ++ E+ A   ++ ++QDQ+ANYVVQRALSVA+    L LV A+ PHL +M+NT+GGRRI ++I KRFP++
Sbjct:  280 VYAMSKDQNGCRLLQEQLD-GRSDLCDVIYAEAVPHLVDMMVDPFGNYLFQKLLERVSDGQRLVIVQHVASHLVAAALNLHGTRSVQKVVEVCATDRALASLIVSALDDDAVRLCIDSNGNHVIQRALQFLPAEFNQFVFDAVAADCTVVGTHRHGCCVLQRCVDAANESQKRAVIAQVERHAMKLMQDPYGNYVVQYVLDACPSDETVGVMAKCVGHLFELSVQKFSSNVVEKCLELAPYELRQTFVKELIASPRMQRMLQDQFANYVVQRALSVASDEHCLALVHAIAPHLPSMKNTSGGRRIQARILKRFPHM 594          
BLAST of EWM23392.1 vs. NCBI_GenBank
Match: gi|1173959987|gb|OQS06158.1| (hypothetical protein THRCLA_01796 [Thraustotheca clavata])

HSP 1 Score: 357.451 bits (916), Expect = 2.114e-106
Identity = 172/324 (53.09%), Postives = 232/324 (71.60%), Query Frame = 0
Query:  817 VQSLSQDQVGCRFLQLKLDEAG-AEAATIIFQQAKPCMAEMMTDPFGNYLFQKILDKTSEQERATILSLVQDELVSGALNLHGTRSVQRILEVCRTKDQVA-TITAALRHDVVRLCVDANGNHVIQRALQHLGSEDRAFIFEAVSQACLEVSTHRHGCCVMQRCLDAATPLQRRALVVEIGRNCLQLMQDPYGNYVVQYVLDRCAADEIRPVTSCPLGRITSLSVQKYSSNVVEKCLEKASEDIQSAYIDEMCAPGNIKHLMQDQYANYVVQRALSVATHSRGLHLVEAVRPHLHAMRNTAGGRRILSKITKRFPN-VDLGADM 1137
            V ++S+DQ GCR LQ +LD     +   +I+ ++ P + +MM DPFGNYLFQK+L++ +  +R  I+  V   LV+ ALNLHGTRSVQ+++EVC     +A  I  AL+ D VRLC+D+NGNHVIQRALQ L SE   F+F+AVS  C  + THRHGCCV+QRC+DAA   Q+RA++ E+  + ++LMQDPYGNYVVQYVLD C  +E   V +  +G I  LSVQK+SSNVVEKCLE A  D++  ++ E+ A   +  ++QDQ+ANYVVQRALSVA+    L LV A++PHL AM+NT+GGRRI ++I KRFP+ V++  DM
Sbjct:  254 VFAMSKDQNGCRLLQEQLDYVDRTDLCDLIYTESVPHLVDMMVDPFGNYLFQKLLERVTNAQRLVIVQHVGYHLVAAALNLHGTRSVQKVVEVCAPDRVLAGLIVDALKDDAVRLCIDSNGNHVIQRALQFLPSEFNQFVFDAVSADCTVIGTHRHGCCVLQRCVDAANKTQKRAVIAEVENHAMKLMQDPYGNYVVQYVLDACPNEETAGVMAQCVGHIFELSVQKFSSNVVEKCLELAPFDLRQTFVKEIIASPRMHRMLQDQFANYVVQRALSVASDEHCLALVHAIQPHLAAMKNTSGGRRIQARILKRFPHMVEMAIDM 577          
BLAST of EWM23392.1 vs. NCBI_GenBank
Match: gi|635361782|emb|CCI49339.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 366.311 bits (939), Expect = 3.287e-106
Identity = 173/329 (52.58%), Postives = 231/329 (70.21%), Query Frame = 0
Query:  817 VQSLSQDQVGCRFLQLKLDEAGAEAAT-IIFQQAKPCMAEMMTDPFGNYLFQKILDKTSEQERATILSLVQDELVSGALNLHGTRSVQRILEVC-RTK----------DQVATITAALRHDVVRLCVDANGNHVIQRALQHLGSEDRAFIFEAVSQACLEVSTHRHGCCVMQRCLDAATPLQRRALVVEIGRNCLQLMQDPYGNYVVQYVLDRCAADEIRPVTSCPLGRITSLSVQKYSSNVVEKCLEKASEDIQSAYIDEMCAPGNIKHLMQDQYANYVVQRALSVATHSRGLHLVEAVRPHLHAMRNTAGGRRILSKITKRFPNVDL 1133
            V S+S+DQ GCR LQ +L+    +    IIFQ++   + EMM DPFGNYLFQK++ +  E +R  I+  V   L++ ALNLHGTRSVQ+++E+C  TK          D    +  AL+ D VRLC+D+NGNHVIQRALQ+  S+   FIF+AVS+ C  V THRHGCCV+QRCLDAA  LQ++ L+ ++  + ++LMQDPYGNYVVQYVLD C A+E   +   PLG +  LSVQK+SSNVVEKCLEKA E I+  Y++E+     ++ L+QDQ+ANYVVQRAL V   S+ + LV A+ PHL+AM+N++ GRRI ++I KRFP +DL
Sbjct:  544 VYSMSKDQNGCRLLQEQLEYDDRKVLWQIIFQESLDHLPEMMVDPFGNYLFQKLIARADEWQRLAIVRAVCPHLMAAALNLHGTRSVQKVVEICANTKSEHSNEENGMDLSELVVEALKDDAVRLCIDSNGNHVIQRALQYFQSKSTQFIFDAVSRECTTVGTHRHGCCVLQRCLDAANTLQKKELIAQVENHAMKLMQDPYGNYVVQYVLDACTAEEAIGIMIKPLGHVFELSVQKFSSNVVEKCLEKAPERIRRRYVEELIGCAKMQRLLQDQFANYVVQRALCVCAESQCMALVTAICPHLNAMKNSSNGRRITARIAKRFPQMDL 872          
BLAST of EWM23392.1 vs. NCBI_GenBank
Match: gi|325187460|emb|CCA21998.1| (conserved hypothetical protein [Albugo laibachii Nc14])

HSP 1 Score: 362.073 bits (928), Expect = 6.467e-105
Identity = 177/352 (50.28%), Postives = 239/352 (67.90%), Query Frame = 0
Query:  800 ALASATPSLEEILKSSTVQSLSQDQVGCRFLQLKLDEAGAEAAT-IIFQQAKPCMAEMMTDPFGNYLFQKILDKTSEQERATILSLVQDELVSGALNLHGTRSVQRILEVC-----RTKDQVAT-----ITAALRHDVVRLCVDANGNHVIQRALQHLGSEDRAFIFEAVSQACLEVSTHRHGCCVMQRCLDAATPLQRRALVVEIGRNCLQLMQDPYGNYVVQYVLDRCAADEIRPVTSCPLGRITSLSVQKYSSNVVEKCLEKASEDIQSAYIDEMCAPGNIKHLMQDQYANYVVQRALSVATHSRGLHLVEAVRPHLHAMRNTAGGRRILSKITKRFPNVDLGADMMAG 1140
            AL + + S E+I     V S+S+DQ GCR LQ +L+    +    IIFQ++   + EMM DPFGNYLFQK++ +  E +R  I+  V   L++ ALNLHGTRSVQ+++E+C       KD  +      I  AL+ D VRLC+D+NGNHVIQRALQ+   +   FIF+AVS+ C  V THRHGCCV+QRCLDAA   Q++ L+ ++  + ++LMQDPYGNYVVQYVLD C A+E   +   PLG +  LS+QK+SSNVVEKCLEKA E I+  Y++E+     ++ L+QDQ+ANYVVQRAL V   S+ + LV A+ PHL AM+N++ GRRI ++I KRFP +DL   M +G
Sbjct:  517 ALTTLSISEEDI--KGRVYSMSKDQNGCRLLQEQLEYDDRKTLWQIIFQESLHHLPEMMVDPFGNYLFQKLIARADEWQRLAIVRAVCPHLMAAALNLHGTRSVQKVVEICAISQSEKKDATSIDLPQLIVHALKDDAVRLCIDSNGNHVIQRALQYFNPKFTQFIFDAVSRECTTVGTHRHGCCVLQRCLDAANVTQKKELIAQVEYHAMKLMQDPYGNYVVQYVLDACTAEEAIGIMMKPLGHVFELSIQKFSSNVVEKCLEKAPERIRRRYVEELIVCAKMQRLLQDQFANYVVQRALCVCAESQCMALVAAICPHLSAMKNSSNGRRISARIEKRFPQMDLEMAMESG 866          
BLAST of EWM23392.1 vs. NCBI_GenBank
Match: gi|1210523070|dbj|GAX18121.1| (hypothetical protein FisN_25Hh102 [Fistulifera solaris])

HSP 1 Score: 358.992 bits (920), Expect = 1.269e-103
Identity = 194/429 (45.22%), Postives = 256/429 (59.67%), Query Frame = 0
Query:  803 SATPSLEEILKSSTVQSLSQDQVGCRFLQLKLDEAGAEAATIIFQQAKPCMAEMMTDPFGNYLFQKILDKTSEQERATILSLVQDELVSGALNLHGTRSVQRILEVCRTKDQ-------------VATITAALRHDVVRLCVDANGNHVIQRALQHLGSEDRAFIFEAVSQACLEVSTHRHGCCVMQRCLDAATPLQRRALVVEIGRNCLQLMQDPYGNYVVQYVLDRCAADEIRPVTSCPLGRITSLSVQKYSSNVVEKCLEKASEDIQSAYIDEMCAPGNIKHLMQDQYANYVVQRALSVATHSRGLHLVEAVRPHLHA-----------MRNTAGGRRILSKITKRFPNVDLGADMMAGGGAGGTVGNSGGPGGYVSGMNNGHGSMHHPGHM------HAL-HGSGHPPPVQHHP--HHQHSHPHL 1198
            S  P LE +L    V+ LS+DQVGCR +Q  LDE G  AAT+I  +  P   E M DPFGNYLFQKIL+K + +ER  ++  V   LV+ +LNLHGTRSVQ+++E+C   DQ                +T AL     RLC+D++GNHVIQR L  L      F+F+AV+ +  +V+ HRHGCCV+QRCLD+     R  LV+ I    L+LMQD YGNYVVQYVLD C+ D+++ V     G++  L++QK+SSNV+EKCLE+ S+ +++ Y+ EM  P  I+ LM D + NYVVQRALSVATH + + LVEA+RPHL A           +RNTAGGRRI++KI +RFPN  L           G++        Y    N+ H   H  GH       H+L H  GHP  +QHH   H +HS  H 
Sbjct:  419 SQRPPLEALL--GQVRRLSRDQVGCRLVQQALDEEGPTAATLILNEGLPFWGEAMVDPFGNYLFQKILEKITPEERVMLIKSVSSRLVNASLNLHGTRSVQKVVELCAIDDQQSPDDKGVETESAAQVLTNALAPAAARLCIDSHGNHVIQRILLKLDPRHSKFVFDAVAASVGDVARHRHGCCVIQRCLDSPQNESRANLVLRIVDKSLELMQDAYGNYVVQYVLDVCSDDDVQAVCESVAGKVNLLAIQKFSSNVMEKCLERCSDRVKAMYLAEMSDPERIRELMMDPFGNYVVQRALSVATHEQAIRLVEAMRPHLIATQTGNGQRNGGVRNTAGGRRIIAKICRRFPNFTLNP--------VGSIDEL-----YSQNRNSRHAVQHSHGHAVQHPHGHSLQHAHGHP--IQHHEGHHVRHSRGHQ 830          
The following BLAST results are available for this feature:
BLAST of EWM23392.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585104404|gb|EWM23392.1|0.000e+0100.00rna-binding protein [Nannochloropsis gaditana][more]
gi|298709331|emb|CBJ31267.1|3.317e-11650.41conserved unknown protein [Ectocarpus siliculosus][more]
gi|1173936746|gb|OQR87640.1|8.435e-10951.14hypothetical protein ACHHYP_08412 [Achlya hypogyna... [more]
gi|698816756|ref|XP_009841407.1|3.391e-10851.82hypothetical protein H257_15109 [Aphanomyces astac... [more]
gi|673040669|ref|XP_008874295.1|7.865e-10750.14hypothetical protein H310_09878 [Aphanomyces invad... [more]
gi|669148602|ref|XP_008609863.1|9.244e-10753.48hypothetical protein SDRG_05899 [Saprolegnia dicli... [more]
gi|1173959987|gb|OQS06158.1|2.114e-10653.09hypothetical protein THRCLA_01796 [Thraustotheca c... [more]
gi|635361782|emb|CCI49339.1|3.287e-10652.58unnamed protein product [Albugo candida][more]
gi|325187460|emb|CCA21998.1|6.467e-10550.28conserved hypothetical protein [Albugo laibachii N... [more]
gi|1210523070|dbj|GAX18121.1|1.269e-10345.22hypothetical protein FisN_25Hh102 [Fistulifera sol... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7296rna7296Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications