EWM29954.1, cds727 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29954.1 vs. NCBI_GenBank
Match: gi|585112542|gb|EWM29954.1| (ring-finger-containing e3 ubiquitin [Nannochloropsis gaditana]) HSP 1 Score: 1445.25 bits (3740), Expect = 0.000e+0 Identity = 700/700 (100.00%), Postives = 700/700 (100.00%), Query Frame = 0 Query: 1 MSWFFSRGREPSPTITEGEQRETRHDIRGPPDSDALVSLEEGHASSAALPPPSPLAPGASTVPTSQASTIPRPDGPPTAGERADITSWQEKNRKSRNVTEYVEGGRRSEGYYQHPNRQRHHDRPRRNSWGDVRGQPPHLHSHKHKHPREDSQTTSSGASGGGEGGGSGDGMGPSIGSTGSLSTLGKIGRHVSQSFQMSLDIVKTHLGEELVFCQVCREYERVSKTYRLGACGHRYCRGCFTSYLECKISEGQIHPTCFYSEENGRTGREGRRYRTIPRPCATPVLESDMYTLVCPETWLKYERFKFQKAHRNARMCPFCDSAELGDAEQPAMTCSKCGKQFCYFHASAHPNKSCTEYEQLTHEETLRNQAMISTIAKPCPGCGNPVEKSGGCNQMACVWCGQNWCWLCGKLVDNGTFPDHFQWWNVIGGCPNMQMQEDLEPPPPSHIRLVKFLSILQLIFIGPAAFVIGTGLYIACFPCFLFKCVGVIGQGDDERENEEGGRQLRAHYTGCISFWGNTLVAFLLIPFFVAMLLLFFLLTFFQVLCSSVHSRFGICCGMEKGWEGGGERGERGQGRREGTRPHGEEAEGGALATPPPSTVEAAAAAINVFAAMTHSFSVGGGGAGGGGGAGAMNRAHSSAVAGRSLVKSKEKVGAVEARELTAGKEGGGVATARALAAPEVQDMTRVRPAERGGREESLEM 700 MSWFFSRGREPSPTITEGEQRETRHDIRGPPDSDALVSLEEGHASSAALPPPSPLAPGASTVPTSQASTIPRPDGPPTAGERADITSWQEKNRKSRNVTEYVEGGRRSEGYYQHPNRQRHHDRPRRNSWGDVRGQPPHLHSHKHKHPREDSQTTSSGASGGGEGGGSGDGMGPSIGSTGSLSTLGKIGRHVSQSFQMSLDIVKTHLGEELVFCQVCREYERVSKTYRLGACGHRYCRGCFTSYLECKISEGQIHPTCFYSEENGRTGREGRRYRTIPRPCATPVLESDMYTLVCPETWLKYERFKFQKAHRNARMCPFCDSAELGDAEQPAMTCSKCGKQFCYFHASAHPNKSCTEYEQLTHEETLRNQAMISTIAKPCPGCGNPVEKSGGCNQMACVWCGQNWCWLCGKLVDNGTFPDHFQWWNVIGGCPNMQMQEDLEPPPPSHIRLVKFLSILQLIFIGPAAFVIGTGLYIACFPCFLFKCVGVIGQGDDERENEEGGRQLRAHYTGCISFWGNTLVAFLLIPFFVAMLLLFFLLTFFQVLCSSVHSRFGICCGMEKGWEGGGERGERGQGRREGTRPHGEEAEGGALATPPPSTVEAAAAAINVFAAMTHSFSVGGGGAGGGGGAGAMNRAHSSAVAGRSLVKSKEKVGAVEARELTAGKEGGGVATARALAAPEVQDMTRVRPAERGGREESLEM Sbjct: 1 MSWFFSRGREPSPTITEGEQRETRHDIRGPPDSDALVSLEEGHASSAALPPPSPLAPGASTVPTSQASTIPRPDGPPTAGERADITSWQEKNRKSRNVTEYVEGGRRSEGYYQHPNRQRHHDRPRRNSWGDVRGQPPHLHSHKHKHPREDSQTTSSGASGGGEGGGSGDGMGPSIGSTGSLSTLGKIGRHVSQSFQMSLDIVKTHLGEELVFCQVCREYERVSKTYRLGACGHRYCRGCFTSYLECKISEGQIHPTCFYSEENGRTGREGRRYRTIPRPCATPVLESDMYTLVCPETWLKYERFKFQKAHRNARMCPFCDSAELGDAEQPAMTCSKCGKQFCYFHASAHPNKSCTEYEQLTHEETLRNQAMISTIAKPCPGCGNPVEKSGGCNQMACVWCGQNWCWLCGKLVDNGTFPDHFQWWNVIGGCPNMQMQEDLEPPPPSHIRLVKFLSILQLIFIGPAAFVIGTGLYIACFPCFLFKCVGVIGQGDDERENEEGGRQLRAHYTGCISFWGNTLVAFLLIPFFVAMLLLFFLLTFFQVLCSSVHSRFGICCGMEKGWEGGGERGERGQGRREGTRPHGEEAEGGALATPPPSTVEAAAAAINVFAAMTHSFSVGGGGAGGGGGAGAMNRAHSSAVAGRSLVKSKEKVGAVEARELTAGKEGGGVATARALAAPEVQDMTRVRPAERGGREESLEM 700
BLAST of EWM29954.1 vs. NCBI_GenBank
Match: gi|553182073|ref|XP_005853674.1| (ring-finger-containing e3 ubiquitin, partial [Nannochloropsis gaditana CCMP526] >gi|422295389|gb|EKU22688.1| ring-finger-containing e3 ubiquitin, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 813.142 bits (2099), Expect = 0.000e+0 Identity = 384/384 (100.00%), Postives = 384/384 (100.00%), Query Frame = 0 Query: 136 PPHLHSHKHKHPREDSQTTSSGASGGGEGGGSGDGMGPSIGSTGSLSTLGKIGRHVSQSFQMSLDIVKTHLGEELVFCQVCREYERVSKTYRLGACGHRYCRGCFTSYLECKISEGQIHPTCFYSEENGRTGREGRRYRTIPRPCATPVLESDMYTLVCPETWLKYERFKFQKAHRNARMCPFCDSAELGDAEQPAMTCSKCGKQFCYFHASAHPNKSCTEYEQLTHEETLRNQAMISTIAKPCPGCGNPVEKSGGCNQMACVWCGQNWCWLCGKLVDNGTFPDHFQWWNVIGGCPNMQMQEDLEPPPPSHIRLVKFLSILQLIFIGPAAFVIGTGLYIACFPCFLFKCVGVIGQGDDERENEEGGRQLRAHYTGCISFWGNTL 519 PPHLHSHKHKHPREDSQTTSSGASGGGEGGGSGDGMGPSIGSTGSLSTLGKIGRHVSQSFQMSLDIVKTHLGEELVFCQVCREYERVSKTYRLGACGHRYCRGCFTSYLECKISEGQIHPTCFYSEENGRTGREGRRYRTIPRPCATPVLESDMYTLVCPETWLKYERFKFQKAHRNARMCPFCDSAELGDAEQPAMTCSKCGKQFCYFHASAHPNKSCTEYEQLTHEETLRNQAMISTIAKPCPGCGNPVEKSGGCNQMACVWCGQNWCWLCGKLVDNGTFPDHFQWWNVIGGCPNMQMQEDLEPPPPSHIRLVKFLSILQLIFIGPAAFVIGTGLYIACFPCFLFKCVGVIGQGDDERENEEGGRQLRAHYTGCISFWGNTL Sbjct: 6 PPHLHSHKHKHPREDSQTTSSGASGGGEGGGSGDGMGPSIGSTGSLSTLGKIGRHVSQSFQMSLDIVKTHLGEELVFCQVCREYERVSKTYRLGACGHRYCRGCFTSYLECKISEGQIHPTCFYSEENGRTGREGRRYRTIPRPCATPVLESDMYTLVCPETWLKYERFKFQKAHRNARMCPFCDSAELGDAEQPAMTCSKCGKQFCYFHASAHPNKSCTEYEQLTHEETLRNQAMISTIAKPCPGCGNPVEKSGGCNQMACVWCGQNWCWLCGKLVDNGTFPDHFQWWNVIGGCPNMQMQEDLEPPPPSHIRLVKFLSILQLIFIGPAAFVIGTGLYIACFPCFLFKCVGVIGQGDDERENEEGGRQLRAHYTGCISFWGNTL 389
BLAST of EWM29954.1 vs. NCBI_GenBank
Match: gi|1173948497|gb|OQR96619.1| (RING-finger-containing E3 ubiquitin ligase, partial [Thraustotheca clavata]) HSP 1 Score: 270.396 bits (690), Expect = 3.260e-75 Identity = 147/340 (43.24%), Postives = 186/340 (54.71%), Query Frame = 0 Query: 209 ELVFCQVCREYERVSKTYRLGACGHRYCRGCFTSYLECKISEGQIHPTCFYSEENGRTGREGRRYRTIPRPCATPVLESDMYTLVCPETWLKYERFKFQKAHRNARMCPFCDSAELGDA-EQPAMTCSKCGKQFCYFHASAHPNKSCTEYEQLTHEETLRNQAMISTIAKPCPGCGNPVEKSGGCNQMACVWCGQNWCWLCGKLVDNGTFPDHFQWWNVIGGCPNMQMQEDLEPPPPSHIRLVKF-LSILQLIFIGPAAFVIGTGLYI---ACFPCFLFKCVGVIGQGDDERENEEGGRQLRAHYTGCISFWGNTLVAFLLIPFFVA--MLLLFFLLTFF 541 E +CQ+C EY VS TY L ACGHR+C C +YLE KI++G IHP CFY TG T +PC + D+ TLV + KYE+FKF K H +AR CPFC+ ++G P M C KC K FCY H++AHP SC EYE E NQA IS I+KPCPGC NPVEK+GGCNQM C+ CG ++CWLCGK VD G FP+HFQWWN + GC QM E P + +L+ F IL GP AFV+ I C PCF+ G R+ + C G L++ PF +A + LL F+++ + Sbjct: 455 ETTYCQICLEYVDVSSTYPLSACGHRFCVECINAYLESKINDGLIHPKCFYMP--TATGD------TEAQPCQVLITSDDIQTLVSTSVYEKYEKFKFVKTHADARECPFCNFVQVGRGPNDPVMECIKCSKIFCYTHSNAHPTTSCIEYEVKMRAEEKINQAKISQISKPCPGCKNPVEKNGGCNQMKCIQCGCHFCWLCGKKVDGGVFPEHFQWWN-LRGCAGAQMSETASEGPSTCSKLLSFSWRILLCAIFGPPAFVMAVTFSILSCCCIPCFM-----------------RGKHFARSAFASCFCVSGYALMS----PFVIAACLPLLPFIISIW 764
BLAST of EWM29954.1 vs. NCBI_GenBank
Match: gi|673033262|ref|XP_008870592.1| (hypothetical protein H310_07079 [Aphanomyces invadans] >gi|673033264|ref|XP_008870593.1| hypothetical protein, variant [Aphanomyces invadans] >gi|574473454|gb|ETW00457.1| hypothetical protein H310_07079 [Aphanomyces invadans] >gi|574473455|gb|ETW00458.1| hypothetical protein, variant [Aphanomyces invadans]) HSP 1 Score: 250.751 bits (639), Expect = 3.023e-71 Identity = 122/268 (45.52%), Postives = 160/268 (59.70%), Query Frame = 0 Query: 209 ELVFCQVCREYERVSKTYRLGACGHRYCRGCFTSYLECKISEGQIHPTCFYSEENGRTGREGRRYRTIPRPCATPVLESDMYTLVCP-ETWLKYERFKFQKAHRNARMCPFCDSAELGD--AEQPAMTCSKCGKQFCYFHASAHPNKSCTEYEQLTHEETLRNQAMISTIAKPCPGCGNPVEKSGGCNQMACVWCGQNWCWLCGKLVDNGTFPDHFQWWNVIGGCPNMQMQEDLEPPPPSHIRLVKFLSILQL-IFIGPAAFVIGTGL 472 E +CQ+C EY V+ T L ACGHR+C C Y+ KI++G ++PTCF++ G + IP C + +D+ ++ E W KYE+FKF K H NAR CPFC ++ A PA+TC +C + +C+ H+SAHP SC EYE+ E NQA IS IAK CPGC +PVEKSGGCNQM C+ CG ++CWLCGK VD+G FP+HFQWWN + GC QM E P ++ FL L L I GP AF++ Sbjct: 161 ETCYCQICLEYVDVASTIMLNACGHRFCIECMEGYVASKITDGLVYPTCFFTSPPSDDGSDS----AIPTTCHAAIHPTDLRAVISSDEVWSKYEKFKFNKEHANARECPFCHHVQVSATAAVDPAITCDECHEVYCFSHSSAHPGTSCVEYEKSRRAEEKLNQAKISQIAKLCPGCKSPVEKSGGCNQMKCITCGIHFCWLCGKQVDDGVFPEHFQWWN-LAGCAGAQMSESTAGQPSMLNKISWFLFRLVLCIVFGPPAFLMAIAF 423
BLAST of EWM29954.1 vs. NCBI_GenBank
Match: gi|813185527|ref|XP_012206935.1| (hypothetical protein SPRG_11364 [Saprolegnia parasitica CBS 223.65] >gi|641528168|gb|KDO22412.1| hypothetical protein SPRG_11364 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 247.284 bits (630), Expect = 3.561e-71 Identity = 127/295 (43.05%), Postives = 169/295 (57.29%), Query Frame = 0 Query: 192 SQSFQMSLDIVKTHLGEELVFCQVCREYERVSKTYRLGACGHRYCRGCFTSYLECKISEGQIHPTCFYSEENGRTGREGRRYRTIPRPCATPVLESDMYTLVCPETWLKYERFKFQKAHRNARMCPFCDSAELGDA-EQPAMTCSKCGKQFCYFHASAHPNKSCTEYEQLTHEETLRNQAMISTIAKPCPGCGNPVEKSGGCNQMACVWCGQNWCWLCGKLVDNGTFPDHFQWWNVIGGCPNMQMQEDLEPPPPSHIRLVKF-LSILQLIFIGPAAFVIGTGLYI---ACFPCFL 481 S SF S+ + E +CQ+C EY V+ T L CGHR+C C YL KIS+G + P CF+++ +GR PC + SD+ LV + + KYE+F F KAH AR CP C ++G+ + P M C++CG+ FCY H++AHP+ +C EYE E NQA IS I+KPCPGC +PVEK+GGCNQM CV CG ++CWLCG+ VD+G FP+HFQWWN + GC QM E P + ++V F IL + GP A + I C PC L Sbjct: 33 SLSFLRSMSTMLGLGMAETSYCQICLEYVDVASTVALSVCGHRFCADCIHGYLASKISDGLVAPKCFFADGDGR-------------PCEALIPPSDIQALVSTDVFEKYEKFNFIKAHAGARECPHCHVLQVGNGPDDPHMDCTQCGEAFCYTHSNAHPHSTCLEYEAKMRAEDKVNQAKISQISKPCPGCKSPVEKNGGCNQMKCVTCGVHFCWLCGEKVDDGVFPEHFQWWN-LRGCAGAQMSETAVEGPSTLSKMVAFSWRILLCLVFGPPALALTLAFSILGCCCIPCCL 313
BLAST of EWM29954.1 vs. NCBI_GenBank
Match: gi|669136974|ref|XP_008604055.1| (hypothetical protein SDRG_00360 [Saprolegnia diclina VS20] >gi|530744390|gb|EQC42632.1| hypothetical protein SDRG_00360 [Saprolegnia diclina VS20]) HSP 1 Score: 249.595 bits (636), Expect = 8.591e-71 Identity = 126/295 (42.71%), Postives = 168/295 (56.95%), Query Frame = 0 Query: 192 SQSFQMSLDIVKTHLGEELVFCQVCREYERVSKTYRLGACGHRYCRGCFTSYLECKISEGQIHPTCFYSEENGRTGREGRRYRTIPRPCATPVLESDMYTLVCPETWLKYERFKFQKAHRNARMCPFCDSAELGDA-EQPAMTCSKCGKQFCYFHASAHPNKSCTEYEQLTHEETLRNQAMISTIAKPCPGCGNPVEKSGGCNQMACVWCGQNWCWLCGKLVDNGTFPDHFQWWNVIGGCPNMQMQEDLEPPPPSHIRLVKF-LSILQLIFIGPAAFVIGTGLYI---ACFPCFL 481 S SF S+ + E +CQ+C EY ++ T L CGHR+C C YL KI++G I P CF+++ +G PC + SD+ LV E + KYE+FKF KAH +AR CP C ++G+ + P M C +CG+ FCY H++AHPN +C YE E NQA IS I+KPCPGC +PVEK+GGCNQM CV CG ++CWLCG+ VD+G FP+HFQWWN + GC QM E P + +++ F IL + GP A + I C PC L Sbjct: 145 SLSFLRSMSTMLGLGMAETSYCQICLEYVDIASTVALSVCGHRFCADCIHGYLANKIADGLIAPKCFFADSDGH-------------PCEAVIPPSDVQALVSTEVFEKYEKFKFIKAHADARECPHCHLLQVGNGPDDPHMDCMQCGESFCYTHSNAHPNSTCLAYEAKMRAEDKVNQAKISQISKPCPGCKSPVEKNGGCNQMKCVTCGVHFCWLCGEKVDDGVFPEHFQWWN-LRGCAGAQMSETAVEGPSTVSKMLSFSWRILLCLLFGPPALALTLAFSILSCCCIPCCL 425
BLAST of EWM29954.1 vs. NCBI_GenBank
Match: gi|813226637|ref|XP_012212395.1| (hypothetical protein SPRG_17370 [Saprolegnia parasitica CBS 223.65] >gi|641521056|gb|KDO16895.1| hypothetical protein SPRG_17370 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 243.817 bits (621), Expect = 2.421e-70 Identity = 121/278 (43.53%), Postives = 164/278 (58.99%), Query Frame = 0 Query: 209 ELVFCQVCREYERVSKTYRLGACGHRYCRGCFTSYLECKISEGQIHPTCFYSEENGRTGREGRRYRTIPRPCATPVLESDMYTLVCPETWLKYERFKFQKAHRNARMCPFCDSAELGDA-EQPAMTCSKCGKQFCYFHASAHPNKSCTEYEQLTHEETLRNQAMISTIAKPCPGCGNPVEKSGGCNQMACVWCGQNWCWLCGKLVDNGTFPDHFQWWNVIGGCPNMQMQEDLEPPPPSHIRLVKF-LSILQLIFIGPAAFVIGTGLYI---ACFPCFL 481 E +CQ+C EY V+ T L CGHR+C C YL KIS+G + P CF+++ +GR PC + SD+ LV + + KYE+F F KAH +AR CP C ++G+ + P M C++CG+ FCY H++AHP+ +C EYE E NQA IS I+KPCPGC +PVEK+GGCNQM CV CG ++CWLCG+ VD+G FP+HFQWWN + GC QM E P + ++V F +L + GP A + + C PC L Sbjct: 11 ETSYCQICLEYVDVASTVALSVCGHRFCADCIHGYLASKISDGLVAPKCFFADGDGR-------------PCEALIPPSDIQALVSTDVFEKYEKFNFIKAHADARECPHCHVLQVGNGPDDPHMDCTQCGEAFCYTHSNAHPHSTCLEYEAKMRAEDKVNQAKISQISKPCPGCKSPVEKNGGCNQMKCVTCGVHFCWLCGEKVDDGVFPEHFQWWN-LRGCAGAQMSETAVEGPSTLSKIVSFSWRLLLCLVFGPPALALTLAFSVLGCCCIPCCL 274
BLAST of EWM29954.1 vs. NCBI_GenBank
Match: gi|1214708922|gb|OWZ20152.1| (RING-finger-containing E3 ubiquitin ligase [Phytophthora megakarya]) HSP 1 Score: 247.284 bits (630), Expect = 7.344e-70 Identity = 132/391 (33.76%), Postives = 195/391 (49.87%), Query Frame = 0 Query: 150 DSQTTSSGASGGGEGGGSGDGMGPSIGSTGSLSTLGKIGRHVSQSFQMSLDIVKTHLG---EELVFCQVCREYERVSKTYRLGACGHRYCRGCFTSYLECKISEGQIHPTCFYSEENGRTGREGRRYRTIPRPCATPVLESDMYTLVCPETWLKYERFKFQKAHRNARMCPFCDSAEL-GDAEQPAMTCSKCGKQFCYFHASAHPNKSCTEYEQLTHEETLRNQAMISTIAKPCPGCGNPVEKSGGCNQMACVWCGQNWCWLCGKLVDNGTFPDHFQWWNVIGGCPNMQMQEDLEPPPPSHIRLVKFLSILQLIFIGPAAFVIGTGLYIACFPCFLFKCVGVIGQGDDERENEEGGRQLRAHYTGCISFWGNTLVAFLLIPFFVAMLLLFF 536 D + + AS E G + + + SL+ + G +S S L + ++LG EE CQ+C +Y V+ +Y L CGH +C C +YLE KI EGQ++P CF+ + +T C + D+ LV E W KY +FKF K H AR CP+CD +++ ++ P C C ++FC+ H+SAH ++C EY++ N A+IS I+K CPGC N VEK+GGCNQM CV C ++CW+C K++D+ FP+HFQWWNV GC QM E +E + + L +L + GP AF++ I C C F C R +T C G L+A +++ + L +F Sbjct: 137 DELSLAVAASSPSESAGEKENL------SFSLAYRRQEGNSLSHSVPSLLRSMASYLGLSMEETFLCQICYDYAPVNTSYALSICGHTFCETCVKNYLEFKIKEGQVYPKCFFEKSEDKTA------------CKADIAVDDIRLLVSEEVWQKYNKFKFNKEHELARQCPYCDHSQICAGSDNPECVCEACNREFCFVHSSAHQGRTCAEYDKKMIAVEKLNNALISKISKQCPGCQNNVEKTGGCNQMKCVVCNTSFCWICLKVIDDSVFPEHFQWWNV-RGCAGNQMAE-IEGQGSTQKGIGIVLRVLFFVIFGPPAFIVAVVFCILC--CCFFPCTA------------STHLTFRQAFTTCFCVSGYVLLAPIVLALGLVALGVFI 493
BLAST of EWM29954.1 vs. NCBI_GenBank
Match: gi|695388843|ref|XP_009519281.1| (hypothetical protein PHYSODRAFT_487639 [Phytophthora sojae] >gi|348684178|gb|EGZ23993.1| hypothetical protein PHYSODRAFT_487639 [Phytophthora sojae]) HSP 1 Score: 247.284 bits (630), Expect = 8.043e-70 Identity = 129/375 (34.40%), Postives = 193/375 (51.47%), Query Frame = 0 Query: 167 SGDGMGPSIGSTGSLSTLGKIGRHVSQSFQMSLDIVKTHLG---EELVFCQVCREYERVSKTYRLGACGHRYCRGCFTSYLECKISEGQIHPTCFYSEENGRTGREGRRYRTIPRPCATPVLESDMYTLVCPETWLKYERFKFQKAHRNARMCPFCDSAEL-GDAEQPAMTCSKCGKQFCYFHASAHPNKSCTEYE-QLTHEETLRNQAMISTIAKPCPGCGNPVEKSGGCNQMACVWCGQNWCWLCGKLVDNGTFPDHFQWWNVIGGCPNMQMQEDLEPPPPSHIRLVKFLSILQLIFIGPAAFVIGTGLYIACFPCFLFKCVGVIGQGDDERENEEGGRQLRAHYTGCISFWGNTLVAFLLIPFFVAMLLLFF 536 +GD + ++ + + + + S L + ++LG EE CQ+C +Y VS +Y L CGH +C C +YLE KI EGQ++P CF+ + + C ++ D+ +LV E W KY +FKF K H AR CP+CD +++ ++ P C C ++FC+ H++AH ++C EY+ Q+ E L N A+IS I+KPCPGC N VEK+GGCNQM CV C ++CW+C K++D+ FP+HFQWWNV GC QM D+E + + + IL + GP AFV+ I C C C R +T C G L+A +++ +A L +F Sbjct: 157 TGDEISLAVAALSLTAFRRQESNSLGHSVPSLLRSMASYLGLSMEETFLCQICYDYAPVSTSYALTGCGHTFCEACLKNYLEFKIKEGQVYPKCFFENSDDKAA------------CKADIVVDDIQSLVSDEVWQKYNKFKFNKEHELARQCPYCDHSQICAGSDHPECVCEACSREFCFVHSNAHQGRTCAEYDKQMIAVEKL-NNALISKISKPCPGCQNNVEKTGGCNQMKCVVCNTSFCWICLKVIDDSVFPEHFQWWNV-RGCAGNQM-ADIEGQGTTQKGIGMVMRILFFVLFGPPAFVLAVVFCILC--CCFLPC------------TTNARLTFRQAFTTCFCASGYVLLAPIVLALGLAALGVFI 502
BLAST of EWM29954.1 vs. NCBI_GenBank
Match: gi|675165731|ref|XP_008891750.1| (hypothetical protein PPTG_02428 [Phytophthora parasitica INRA-310] >gi|568022474|gb|ETL96543.1| hypothetical protein L917_06000 [Phytophthora parasitica] >gi|568052835|gb|ETM49697.1| hypothetical protein L914_06120 [Phytophthora parasitica] >gi|568107879|gb|ETN22503.1| hypothetical protein PPTG_02428 [Phytophthora parasitica INRA-310] >gi|570330815|gb|ETO78763.1| hypothetical protein F444_06373 [Phytophthora parasitica P1976]) HSP 1 Score: 248.44 bits (633), Expect = 1.249e-69 Identity = 126/360 (35.00%), Postives = 185/360 (51.39%), Query Frame = 0 Query: 177 STGSLSTLGKIGRHVSQSFQMSLDIVKTHLG---EELVFCQVCREYERVSKTYRLGACGHRYCRGCFTSYLECKISEGQIHPTCFYSEENGRTGREGRRYRTIPRPCATPVLESDMYTLVCPETWLKYERFKFQKAHRNARMCPFCDSAEL-GDAEQPAMTCSKCGKQFCYFHASAHPNKSCTEYEQLTHEETLRNQAMISTIAKPCPGCGNPVEKSGGCNQMACVWCGQNWCWLCGKLVDNGTFPDHFQWWNVIGGCPNMQMQEDLEPPPPSHIRLVKFLSILQLIFIGPAAFVIGTGLYIACFPCFLFKCVGVIGQGDDERENEEGGRQLRAHYTGCISFWGNTLVAFLLIPFFVAML 532 S S++ + +S S L + ++LG EE CQ+C +Y V+ +Y L CGH +C C +YLE KI EGQ++P CF+ + + C + D+ +LV E W KY +FKF K H AR CP+CD +++ ++ P C C ++FC+ H++AH ++C EY++ N A+IS I+KPCPGC N VEK+GGCNQM CV C ++CW+C K++D+ FP+HFQWWNV GC QM D+E + + + IL + GP AFV+ I C CF C R +T C G L+A +++ +A L Sbjct: 210 SLSSMAYRRQDSNSLSHSVPSLLRSMASYLGLSMEETFLCQICYDYASVNTSYGLSVCGHTFCEACLRNYLEFKIKEGQVYPKCFFEKSEDKVA------------CKAEISVDDIQSLVSDEIWQKYNKFKFNKEHELARQCPYCDHSQICAGSDHPECVCEACNREFCFVHSNAHQGRTCAEYDKKMIAVEKLNNALISKISKPCPGCQNNVEKTGGCNQMKCVVCNTSFCWICLKVIDDTVFPEHFQWWNV-RGCAGNQM-ADIEGQGATQKGIGLVMRILFFVIFGPPAFVMAVVFSIMC--CFFLPCTA------------HAHLTFRQAFTTCFCVSGYILLAPIVLVLGLAAL 541 The following BLAST results are available for this feature:
BLAST of EWM29954.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10 Position : 0 Zoom : x 1
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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