EWM29954.1, cds727 (CDS) Nannochloropsis gaditana

Overview
NameEWM29954.1
Unique Namecds727
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:271379..272509 -
Alignment locationCM002456.1:271036..271170 -
Alignment locationCM002456.1:269997..270833 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29954.1
Productring-finger-containing e3 ubiquitin
Orig transcript idgnl|cribi|Naga_100247g8.2337.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:271379..272509 -
CM002456.1supercontigCM002456.1:271036..271170 -
CM002456.1supercontigCM002456.1:269997..270833 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0004842ubiquitin-protein transferase activity
GO:0005515protein binding
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO:0016567protein ubiquitination
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR031127E3_UB_ligase_RBR
IPR002867Znf_C6HC
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING
Homology
BLAST of EWM29954.1 vs. NCBI_GenBank
Match: gi|585112542|gb|EWM29954.1| (ring-finger-containing e3 ubiquitin [Nannochloropsis gaditana])

HSP 1 Score: 1445.25 bits (3740), Expect = 0.000e+0
Identity = 700/700 (100.00%), Postives = 700/700 (100.00%), Query Frame = 0
Query:    1 MSWFFSRGREPSPTITEGEQRETRHDIRGPPDSDALVSLEEGHASSAALPPPSPLAPGASTVPTSQASTIPRPDGPPTAGERADITSWQEKNRKSRNVTEYVEGGRRSEGYYQHPNRQRHHDRPRRNSWGDVRGQPPHLHSHKHKHPREDSQTTSSGASGGGEGGGSGDGMGPSIGSTGSLSTLGKIGRHVSQSFQMSLDIVKTHLGEELVFCQVCREYERVSKTYRLGACGHRYCRGCFTSYLECKISEGQIHPTCFYSEENGRTGREGRRYRTIPRPCATPVLESDMYTLVCPETWLKYERFKFQKAHRNARMCPFCDSAELGDAEQPAMTCSKCGKQFCYFHASAHPNKSCTEYEQLTHEETLRNQAMISTIAKPCPGCGNPVEKSGGCNQMACVWCGQNWCWLCGKLVDNGTFPDHFQWWNVIGGCPNMQMQEDLEPPPPSHIRLVKFLSILQLIFIGPAAFVIGTGLYIACFPCFLFKCVGVIGQGDDERENEEGGRQLRAHYTGCISFWGNTLVAFLLIPFFVAMLLLFFLLTFFQVLCSSVHSRFGICCGMEKGWEGGGERGERGQGRREGTRPHGEEAEGGALATPPPSTVEAAAAAINVFAAMTHSFSVGGGGAGGGGGAGAMNRAHSSAVAGRSLVKSKEKVGAVEARELTAGKEGGGVATARALAAPEVQDMTRVRPAERGGREESLEM 700
            MSWFFSRGREPSPTITEGEQRETRHDIRGPPDSDALVSLEEGHASSAALPPPSPLAPGASTVPTSQASTIPRPDGPPTAGERADITSWQEKNRKSRNVTEYVEGGRRSEGYYQHPNRQRHHDRPRRNSWGDVRGQPPHLHSHKHKHPREDSQTTSSGASGGGEGGGSGDGMGPSIGSTGSLSTLGKIGRHVSQSFQMSLDIVKTHLGEELVFCQVCREYERVSKTYRLGACGHRYCRGCFTSYLECKISEGQIHPTCFYSEENGRTGREGRRYRTIPRPCATPVLESDMYTLVCPETWLKYERFKFQKAHRNARMCPFCDSAELGDAEQPAMTCSKCGKQFCYFHASAHPNKSCTEYEQLTHEETLRNQAMISTIAKPCPGCGNPVEKSGGCNQMACVWCGQNWCWLCGKLVDNGTFPDHFQWWNVIGGCPNMQMQEDLEPPPPSHIRLVKFLSILQLIFIGPAAFVIGTGLYIACFPCFLFKCVGVIGQGDDERENEEGGRQLRAHYTGCISFWGNTLVAFLLIPFFVAMLLLFFLLTFFQVLCSSVHSRFGICCGMEKGWEGGGERGERGQGRREGTRPHGEEAEGGALATPPPSTVEAAAAAINVFAAMTHSFSVGGGGAGGGGGAGAMNRAHSSAVAGRSLVKSKEKVGAVEARELTAGKEGGGVATARALAAPEVQDMTRVRPAERGGREESLEM
Sbjct:    1 MSWFFSRGREPSPTITEGEQRETRHDIRGPPDSDALVSLEEGHASSAALPPPSPLAPGASTVPTSQASTIPRPDGPPTAGERADITSWQEKNRKSRNVTEYVEGGRRSEGYYQHPNRQRHHDRPRRNSWGDVRGQPPHLHSHKHKHPREDSQTTSSGASGGGEGGGSGDGMGPSIGSTGSLSTLGKIGRHVSQSFQMSLDIVKTHLGEELVFCQVCREYERVSKTYRLGACGHRYCRGCFTSYLECKISEGQIHPTCFYSEENGRTGREGRRYRTIPRPCATPVLESDMYTLVCPETWLKYERFKFQKAHRNARMCPFCDSAELGDAEQPAMTCSKCGKQFCYFHASAHPNKSCTEYEQLTHEETLRNQAMISTIAKPCPGCGNPVEKSGGCNQMACVWCGQNWCWLCGKLVDNGTFPDHFQWWNVIGGCPNMQMQEDLEPPPPSHIRLVKFLSILQLIFIGPAAFVIGTGLYIACFPCFLFKCVGVIGQGDDERENEEGGRQLRAHYTGCISFWGNTLVAFLLIPFFVAMLLLFFLLTFFQVLCSSVHSRFGICCGMEKGWEGGGERGERGQGRREGTRPHGEEAEGGALATPPPSTVEAAAAAINVFAAMTHSFSVGGGGAGGGGGAGAMNRAHSSAVAGRSLVKSKEKVGAVEARELTAGKEGGGVATARALAAPEVQDMTRVRPAERGGREESLEM 700          
BLAST of EWM29954.1 vs. NCBI_GenBank
Match: gi|553182073|ref|XP_005853674.1| (ring-finger-containing e3 ubiquitin, partial [Nannochloropsis gaditana CCMP526] >gi|422295389|gb|EKU22688.1| ring-finger-containing e3 ubiquitin, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 813.142 bits (2099), Expect = 0.000e+0
Identity = 384/384 (100.00%), Postives = 384/384 (100.00%), Query Frame = 0
Query:  136 PPHLHSHKHKHPREDSQTTSSGASGGGEGGGSGDGMGPSIGSTGSLSTLGKIGRHVSQSFQMSLDIVKTHLGEELVFCQVCREYERVSKTYRLGACGHRYCRGCFTSYLECKISEGQIHPTCFYSEENGRTGREGRRYRTIPRPCATPVLESDMYTLVCPETWLKYERFKFQKAHRNARMCPFCDSAELGDAEQPAMTCSKCGKQFCYFHASAHPNKSCTEYEQLTHEETLRNQAMISTIAKPCPGCGNPVEKSGGCNQMACVWCGQNWCWLCGKLVDNGTFPDHFQWWNVIGGCPNMQMQEDLEPPPPSHIRLVKFLSILQLIFIGPAAFVIGTGLYIACFPCFLFKCVGVIGQGDDERENEEGGRQLRAHYTGCISFWGNTL 519
            PPHLHSHKHKHPREDSQTTSSGASGGGEGGGSGDGMGPSIGSTGSLSTLGKIGRHVSQSFQMSLDIVKTHLGEELVFCQVCREYERVSKTYRLGACGHRYCRGCFTSYLECKISEGQIHPTCFYSEENGRTGREGRRYRTIPRPCATPVLESDMYTLVCPETWLKYERFKFQKAHRNARMCPFCDSAELGDAEQPAMTCSKCGKQFCYFHASAHPNKSCTEYEQLTHEETLRNQAMISTIAKPCPGCGNPVEKSGGCNQMACVWCGQNWCWLCGKLVDNGTFPDHFQWWNVIGGCPNMQMQEDLEPPPPSHIRLVKFLSILQLIFIGPAAFVIGTGLYIACFPCFLFKCVGVIGQGDDERENEEGGRQLRAHYTGCISFWGNTL
Sbjct:    6 PPHLHSHKHKHPREDSQTTSSGASGGGEGGGSGDGMGPSIGSTGSLSTLGKIGRHVSQSFQMSLDIVKTHLGEELVFCQVCREYERVSKTYRLGACGHRYCRGCFTSYLECKISEGQIHPTCFYSEENGRTGREGRRYRTIPRPCATPVLESDMYTLVCPETWLKYERFKFQKAHRNARMCPFCDSAELGDAEQPAMTCSKCGKQFCYFHASAHPNKSCTEYEQLTHEETLRNQAMISTIAKPCPGCGNPVEKSGGCNQMACVWCGQNWCWLCGKLVDNGTFPDHFQWWNVIGGCPNMQMQEDLEPPPPSHIRLVKFLSILQLIFIGPAAFVIGTGLYIACFPCFLFKCVGVIGQGDDERENEEGGRQLRAHYTGCISFWGNTL 389          
BLAST of EWM29954.1 vs. NCBI_GenBank
Match: gi|1173948497|gb|OQR96619.1| (RING-finger-containing E3 ubiquitin ligase, partial [Thraustotheca clavata])

HSP 1 Score: 270.396 bits (690), Expect = 3.260e-75
Identity = 147/340 (43.24%), Postives = 186/340 (54.71%), Query Frame = 0
Query:  209 ELVFCQVCREYERVSKTYRLGACGHRYCRGCFTSYLECKISEGQIHPTCFYSEENGRTGREGRRYRTIPRPCATPVLESDMYTLVCPETWLKYERFKFQKAHRNARMCPFCDSAELGDA-EQPAMTCSKCGKQFCYFHASAHPNKSCTEYEQLTHEETLRNQAMISTIAKPCPGCGNPVEKSGGCNQMACVWCGQNWCWLCGKLVDNGTFPDHFQWWNVIGGCPNMQMQEDLEPPPPSHIRLVKF-LSILQLIFIGPAAFVIGTGLYI---ACFPCFLFKCVGVIGQGDDERENEEGGRQLRAHYTGCISFWGNTLVAFLLIPFFVA--MLLLFFLLTFF 541
            E  +CQ+C EY  VS TY L ACGHR+C  C  +YLE KI++G IHP CFY      TG       T  +PC   +   D+ TLV    + KYE+FKF K H +AR CPFC+  ++G     P M C KC K FCY H++AHP  SC EYE     E   NQA IS I+KPCPGC NPVEK+GGCNQM C+ CG ++CWLCGK VD G FP+HFQWWN + GC   QM E     P +  +L+ F   IL     GP AFV+     I    C PCF+                  G    R+ +  C    G  L++    PF +A  + LL F+++ +
Sbjct:  455 ETTYCQICLEYVDVSSTYPLSACGHRFCVECINAYLESKINDGLIHPKCFYMP--TATGD------TEAQPCQVLITSDDIQTLVSTSVYEKYEKFKFVKTHADARECPFCNFVQVGRGPNDPVMECIKCSKIFCYTHSNAHPTTSCIEYEVKMRAEEKINQAKISQISKPCPGCKNPVEKNGGCNQMKCIQCGCHFCWLCGKKVDGGVFPEHFQWWN-LRGCAGAQMSETASEGPSTCSKLLSFSWRILLCAIFGPPAFVMAVTFSILSCCCIPCFM-----------------RGKHFARSAFASCFCVSGYALMS----PFVIAACLPLLPFIISIW 764          
BLAST of EWM29954.1 vs. NCBI_GenBank
Match: gi|673033262|ref|XP_008870592.1| (hypothetical protein H310_07079 [Aphanomyces invadans] >gi|673033264|ref|XP_008870593.1| hypothetical protein, variant [Aphanomyces invadans] >gi|574473454|gb|ETW00457.1| hypothetical protein H310_07079 [Aphanomyces invadans] >gi|574473455|gb|ETW00458.1| hypothetical protein, variant [Aphanomyces invadans])

HSP 1 Score: 250.751 bits (639), Expect = 3.023e-71
Identity = 122/268 (45.52%), Postives = 160/268 (59.70%), Query Frame = 0
Query:  209 ELVFCQVCREYERVSKTYRLGACGHRYCRGCFTSYLECKISEGQIHPTCFYSEENGRTGREGRRYRTIPRPCATPVLESDMYTLVCP-ETWLKYERFKFQKAHRNARMCPFCDSAELGD--AEQPAMTCSKCGKQFCYFHASAHPNKSCTEYEQLTHEETLRNQAMISTIAKPCPGCGNPVEKSGGCNQMACVWCGQNWCWLCGKLVDNGTFPDHFQWWNVIGGCPNMQMQEDLEPPPPSHIRLVKFLSILQL-IFIGPAAFVIGTGL 472
            E  +CQ+C EY  V+ T  L ACGHR+C  C   Y+  KI++G ++PTCF++      G +      IP  C   +  +D+  ++   E W KYE+FKF K H NAR CPFC   ++    A  PA+TC +C + +C+ H+SAHP  SC EYE+    E   NQA IS IAK CPGC +PVEKSGGCNQM C+ CG ++CWLCGK VD+G FP+HFQWWN + GC   QM E     P    ++  FL  L L I  GP AF++    
Sbjct:  161 ETCYCQICLEYVDVASTIMLNACGHRFCIECMEGYVASKITDGLVYPTCFFTSPPSDDGSDS----AIPTTCHAAIHPTDLRAVISSDEVWSKYEKFKFNKEHANARECPFCHHVQVSATAAVDPAITCDECHEVYCFSHSSAHPGTSCVEYEKSRRAEEKLNQAKISQIAKLCPGCKSPVEKSGGCNQMKCITCGIHFCWLCGKQVDDGVFPEHFQWWN-LAGCAGAQMSESTAGQPSMLNKISWFLFRLVLCIVFGPPAFLMAIAF 423          
BLAST of EWM29954.1 vs. NCBI_GenBank
Match: gi|813185527|ref|XP_012206935.1| (hypothetical protein SPRG_11364 [Saprolegnia parasitica CBS 223.65] >gi|641528168|gb|KDO22412.1| hypothetical protein SPRG_11364 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 247.284 bits (630), Expect = 3.561e-71
Identity = 127/295 (43.05%), Postives = 169/295 (57.29%), Query Frame = 0
Query:  192 SQSFQMSLDIVKTHLGEELVFCQVCREYERVSKTYRLGACGHRYCRGCFTSYLECKISEGQIHPTCFYSEENGRTGREGRRYRTIPRPCATPVLESDMYTLVCPETWLKYERFKFQKAHRNARMCPFCDSAELGDA-EQPAMTCSKCGKQFCYFHASAHPNKSCTEYEQLTHEETLRNQAMISTIAKPCPGCGNPVEKSGGCNQMACVWCGQNWCWLCGKLVDNGTFPDHFQWWNVIGGCPNMQMQEDLEPPPPSHIRLVKF-LSILQLIFIGPAAFVIGTGLYI---ACFPCFL 481
            S SF  S+  +      E  +CQ+C EY  V+ T  L  CGHR+C  C   YL  KIS+G + P CF+++ +GR             PC   +  SD+  LV  + + KYE+F F KAH  AR CP C   ++G+  + P M C++CG+ FCY H++AHP+ +C EYE     E   NQA IS I+KPCPGC +PVEK+GGCNQM CV CG ++CWLCG+ VD+G FP+HFQWWN + GC   QM E     P +  ++V F   IL  +  GP A  +     I    C PC L
Sbjct:   33 SLSFLRSMSTMLGLGMAETSYCQICLEYVDVASTVALSVCGHRFCADCIHGYLASKISDGLVAPKCFFADGDGR-------------PCEALIPPSDIQALVSTDVFEKYEKFNFIKAHAGARECPHCHVLQVGNGPDDPHMDCTQCGEAFCYTHSNAHPHSTCLEYEAKMRAEDKVNQAKISQISKPCPGCKSPVEKNGGCNQMKCVTCGVHFCWLCGEKVDDGVFPEHFQWWN-LRGCAGAQMSETAVEGPSTLSKMVAFSWRILLCLVFGPPALALTLAFSILGCCCIPCCL 313          
BLAST of EWM29954.1 vs. NCBI_GenBank
Match: gi|669136974|ref|XP_008604055.1| (hypothetical protein SDRG_00360 [Saprolegnia diclina VS20] >gi|530744390|gb|EQC42632.1| hypothetical protein SDRG_00360 [Saprolegnia diclina VS20])

HSP 1 Score: 249.595 bits (636), Expect = 8.591e-71
Identity = 126/295 (42.71%), Postives = 168/295 (56.95%), Query Frame = 0
Query:  192 SQSFQMSLDIVKTHLGEELVFCQVCREYERVSKTYRLGACGHRYCRGCFTSYLECKISEGQIHPTCFYSEENGRTGREGRRYRTIPRPCATPVLESDMYTLVCPETWLKYERFKFQKAHRNARMCPFCDSAELGDA-EQPAMTCSKCGKQFCYFHASAHPNKSCTEYEQLTHEETLRNQAMISTIAKPCPGCGNPVEKSGGCNQMACVWCGQNWCWLCGKLVDNGTFPDHFQWWNVIGGCPNMQMQEDLEPPPPSHIRLVKF-LSILQLIFIGPAAFVIGTGLYI---ACFPCFL 481
            S SF  S+  +      E  +CQ+C EY  ++ T  L  CGHR+C  C   YL  KI++G I P CF+++ +G              PC   +  SD+  LV  E + KYE+FKF KAH +AR CP C   ++G+  + P M C +CG+ FCY H++AHPN +C  YE     E   NQA IS I+KPCPGC +PVEK+GGCNQM CV CG ++CWLCG+ VD+G FP+HFQWWN + GC   QM E     P +  +++ F   IL  +  GP A  +     I    C PC L
Sbjct:  145 SLSFLRSMSTMLGLGMAETSYCQICLEYVDIASTVALSVCGHRFCADCIHGYLANKIADGLIAPKCFFADSDGH-------------PCEAVIPPSDVQALVSTEVFEKYEKFKFIKAHADARECPHCHLLQVGNGPDDPHMDCMQCGESFCYTHSNAHPNSTCLAYEAKMRAEDKVNQAKISQISKPCPGCKSPVEKNGGCNQMKCVTCGVHFCWLCGEKVDDGVFPEHFQWWN-LRGCAGAQMSETAVEGPSTVSKMLSFSWRILLCLLFGPPALALTLAFSILSCCCIPCCL 425          
BLAST of EWM29954.1 vs. NCBI_GenBank
Match: gi|813226637|ref|XP_012212395.1| (hypothetical protein SPRG_17370 [Saprolegnia parasitica CBS 223.65] >gi|641521056|gb|KDO16895.1| hypothetical protein SPRG_17370 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 243.817 bits (621), Expect = 2.421e-70
Identity = 121/278 (43.53%), Postives = 164/278 (58.99%), Query Frame = 0
Query:  209 ELVFCQVCREYERVSKTYRLGACGHRYCRGCFTSYLECKISEGQIHPTCFYSEENGRTGREGRRYRTIPRPCATPVLESDMYTLVCPETWLKYERFKFQKAHRNARMCPFCDSAELGDA-EQPAMTCSKCGKQFCYFHASAHPNKSCTEYEQLTHEETLRNQAMISTIAKPCPGCGNPVEKSGGCNQMACVWCGQNWCWLCGKLVDNGTFPDHFQWWNVIGGCPNMQMQEDLEPPPPSHIRLVKF-LSILQLIFIGPAAFVIGTGLYI---ACFPCFL 481
            E  +CQ+C EY  V+ T  L  CGHR+C  C   YL  KIS+G + P CF+++ +GR             PC   +  SD+  LV  + + KYE+F F KAH +AR CP C   ++G+  + P M C++CG+ FCY H++AHP+ +C EYE     E   NQA IS I+KPCPGC +PVEK+GGCNQM CV CG ++CWLCG+ VD+G FP+HFQWWN + GC   QM E     P +  ++V F   +L  +  GP A  +     +    C PC L
Sbjct:   11 ETSYCQICLEYVDVASTVALSVCGHRFCADCIHGYLASKISDGLVAPKCFFADGDGR-------------PCEALIPPSDIQALVSTDVFEKYEKFNFIKAHADARECPHCHVLQVGNGPDDPHMDCTQCGEAFCYTHSNAHPHSTCLEYEAKMRAEDKVNQAKISQISKPCPGCKSPVEKNGGCNQMKCVTCGVHFCWLCGEKVDDGVFPEHFQWWN-LRGCAGAQMSETAVEGPSTLSKIVSFSWRLLLCLVFGPPALALTLAFSVLGCCCIPCCL 274          
BLAST of EWM29954.1 vs. NCBI_GenBank
Match: gi|1214708922|gb|OWZ20152.1| (RING-finger-containing E3 ubiquitin ligase [Phytophthora megakarya])

HSP 1 Score: 247.284 bits (630), Expect = 7.344e-70
Identity = 132/391 (33.76%), Postives = 195/391 (49.87%), Query Frame = 0
Query:  150 DSQTTSSGASGGGEGGGSGDGMGPSIGSTGSLSTLGKIGRHVSQSFQMSLDIVKTHLG---EELVFCQVCREYERVSKTYRLGACGHRYCRGCFTSYLECKISEGQIHPTCFYSEENGRTGREGRRYRTIPRPCATPVLESDMYTLVCPETWLKYERFKFQKAHRNARMCPFCDSAEL-GDAEQPAMTCSKCGKQFCYFHASAHPNKSCTEYEQLTHEETLRNQAMISTIAKPCPGCGNPVEKSGGCNQMACVWCGQNWCWLCGKLVDNGTFPDHFQWWNVIGGCPNMQMQEDLEPPPPSHIRLVKFLSILQLIFIGPAAFVIGTGLYIACFPCFLFKCVGVIGQGDDERENEEGGRQLRAHYTGCISFWGNTLVAFLLIPFFVAMLLLFF 536
            D  + +  AS   E  G  + +      + SL+   + G  +S S    L  + ++LG   EE   CQ+C +Y  V+ +Y L  CGH +C  C  +YLE KI EGQ++P CF+ +   +T             C   +   D+  LV  E W KY +FKF K H  AR CP+CD +++   ++ P   C  C ++FC+ H+SAH  ++C EY++        N A+IS I+K CPGC N VEK+GGCNQM CV C  ++CW+C K++D+  FP+HFQWWNV  GC   QM E +E    +   +   L +L  +  GP AF++     I C  C  F C                    R  +T C    G  L+A +++   +  L +F 
Sbjct:  137 DELSLAVAASSPSESAGEKENL------SFSLAYRRQEGNSLSHSVPSLLRSMASYLGLSMEETFLCQICYDYAPVNTSYALSICGHTFCETCVKNYLEFKIKEGQVYPKCFFEKSEDKTA------------CKADIAVDDIRLLVSEEVWQKYNKFKFNKEHELARQCPYCDHSQICAGSDNPECVCEACNREFCFVHSSAHQGRTCAEYDKKMIAVEKLNNALISKISKQCPGCQNNVEKTGGCNQMKCVVCNTSFCWICLKVIDDSVFPEHFQWWNV-RGCAGNQMAE-IEGQGSTQKGIGIVLRVLFFVIFGPPAFIVAVVFCILC--CCFFPCTA------------STHLTFRQAFTTCFCVSGYVLLAPIVLALGLVALGVFI 493          
BLAST of EWM29954.1 vs. NCBI_GenBank
Match: gi|695388843|ref|XP_009519281.1| (hypothetical protein PHYSODRAFT_487639 [Phytophthora sojae] >gi|348684178|gb|EGZ23993.1| hypothetical protein PHYSODRAFT_487639 [Phytophthora sojae])

HSP 1 Score: 247.284 bits (630), Expect = 8.043e-70
Identity = 129/375 (34.40%), Postives = 193/375 (51.47%), Query Frame = 0
Query:  167 SGDGMGPSIGSTGSLSTLGKIGRHVSQSFQMSLDIVKTHLG---EELVFCQVCREYERVSKTYRLGACGHRYCRGCFTSYLECKISEGQIHPTCFYSEENGRTGREGRRYRTIPRPCATPVLESDMYTLVCPETWLKYERFKFQKAHRNARMCPFCDSAEL-GDAEQPAMTCSKCGKQFCYFHASAHPNKSCTEYE-QLTHEETLRNQAMISTIAKPCPGCGNPVEKSGGCNQMACVWCGQNWCWLCGKLVDNGTFPDHFQWWNVIGGCPNMQMQEDLEPPPPSHIRLVKFLSILQLIFIGPAAFVIGTGLYIACFPCFLFKCVGVIGQGDDERENEEGGRQLRAHYTGCISFWGNTLVAFLLIPFFVAMLLLFF 536
            +GD +  ++ +    +   +    +  S    L  + ++LG   EE   CQ+C +Y  VS +Y L  CGH +C  C  +YLE KI EGQ++P CF+   + +              C   ++  D+ +LV  E W KY +FKF K H  AR CP+CD +++   ++ P   C  C ++FC+ H++AH  ++C EY+ Q+   E L N A+IS I+KPCPGC N VEK+GGCNQM CV C  ++CW+C K++D+  FP+HFQWWNV  GC   QM  D+E    +   +   + IL  +  GP AFV+     I C  C    C                    R  +T C    G  L+A +++   +A L +F 
Sbjct:  157 TGDEISLAVAALSLTAFRRQESNSLGHSVPSLLRSMASYLGLSMEETFLCQICYDYAPVSTSYALTGCGHTFCEACLKNYLEFKIKEGQVYPKCFFENSDDKAA------------CKADIVVDDIQSLVSDEVWQKYNKFKFNKEHELARQCPYCDHSQICAGSDHPECVCEACSREFCFVHSNAHQGRTCAEYDKQMIAVEKL-NNALISKISKPCPGCQNNVEKTGGCNQMKCVVCNTSFCWICLKVIDDSVFPEHFQWWNV-RGCAGNQM-ADIEGQGTTQKGIGMVMRILFFVLFGPPAFVLAVVFCILC--CCFLPC------------TTNARLTFRQAFTTCFCASGYVLLAPIVLALGLAALGVFI 502          
BLAST of EWM29954.1 vs. NCBI_GenBank
Match: gi|675165731|ref|XP_008891750.1| (hypothetical protein PPTG_02428 [Phytophthora parasitica INRA-310] >gi|568022474|gb|ETL96543.1| hypothetical protein L917_06000 [Phytophthora parasitica] >gi|568052835|gb|ETM49697.1| hypothetical protein L914_06120 [Phytophthora parasitica] >gi|568107879|gb|ETN22503.1| hypothetical protein PPTG_02428 [Phytophthora parasitica INRA-310] >gi|570330815|gb|ETO78763.1| hypothetical protein F444_06373 [Phytophthora parasitica P1976])

HSP 1 Score: 248.44 bits (633), Expect = 1.249e-69
Identity = 126/360 (35.00%), Postives = 185/360 (51.39%), Query Frame = 0
Query:  177 STGSLSTLGKIGRHVSQSFQMSLDIVKTHLG---EELVFCQVCREYERVSKTYRLGACGHRYCRGCFTSYLECKISEGQIHPTCFYSEENGRTGREGRRYRTIPRPCATPVLESDMYTLVCPETWLKYERFKFQKAHRNARMCPFCDSAEL-GDAEQPAMTCSKCGKQFCYFHASAHPNKSCTEYEQLTHEETLRNQAMISTIAKPCPGCGNPVEKSGGCNQMACVWCGQNWCWLCGKLVDNGTFPDHFQWWNVIGGCPNMQMQEDLEPPPPSHIRLVKFLSILQLIFIGPAAFVIGTGLYIACFPCFLFKCVGVIGQGDDERENEEGGRQLRAHYTGCISFWGNTLVAFLLIPFFVAML 532
            S  S++   +    +S S    L  + ++LG   EE   CQ+C +Y  V+ +Y L  CGH +C  C  +YLE KI EGQ++P CF+ +   +              C   +   D+ +LV  E W KY +FKF K H  AR CP+CD +++   ++ P   C  C ++FC+ H++AH  ++C EY++        N A+IS I+KPCPGC N VEK+GGCNQM CV C  ++CW+C K++D+  FP+HFQWWNV  GC   QM  D+E    +   +   + IL  +  GP AFV+     I C  CF   C                    R  +T C    G  L+A +++   +A L
Sbjct:  210 SLSSMAYRRQDSNSLSHSVPSLLRSMASYLGLSMEETFLCQICYDYASVNTSYGLSVCGHTFCEACLRNYLEFKIKEGQVYPKCFFEKSEDKVA------------CKAEISVDDIQSLVSDEIWQKYNKFKFNKEHELARQCPYCDHSQICAGSDHPECVCEACNREFCFVHSNAHQGRTCAEYDKKMIAVEKLNNALISKISKPCPGCQNNVEKTGGCNQMKCVVCNTSFCWICLKVIDDTVFPEHFQWWNV-RGCAGNQM-ADIEGQGATQKGIGLVMRILFFVIFGPPAFVMAVVFSIMC--CFFLPCTA------------HAHLTFRQAFTTCFCVSGYILLAPIVLVLGLAAL 541          
The following BLAST results are available for this feature:
BLAST of EWM29954.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Position :
0
Zoom :
x 1
01SequenceEWM29954.1XP_005853674.1OQR96619.1XP_008870592.1XP_012206935.1XP_008604055.1XP_012212395.1OWZ20152.1XP_009519281.1XP_008891750.1
Match NameE-valueIdentityDescription
gi|585112542|gb|EWM29954.1|0.000e+0100.00ring-finger-containing e3 ubiquitin [Nannochlorops... [more]
gi|553182073|ref|XP_005853674.1|0.000e+0100.00ring-finger-containing e3 ubiquitin, partial [Nann... [more]
gi|1173948497|gb|OQR96619.1|3.260e-7543.24RING-finger-containing E3 ubiquitin ligase, partia... [more]
gi|673033262|ref|XP_008870592.1|3.023e-7145.52hypothetical protein H310_07079 [Aphanomyces invad... [more]
gi|813185527|ref|XP_012206935.1|3.561e-7143.05hypothetical protein SPRG_11364 [Saprolegnia paras... [more]
gi|669136974|ref|XP_008604055.1|8.591e-7142.71hypothetical protein SDRG_00360 [Saprolegnia dicli... [more]
gi|813226637|ref|XP_012212395.1|2.421e-7043.53hypothetical protein SPRG_17370 [Saprolegnia paras... [more]
gi|1214708922|gb|OWZ20152.1|7.344e-7033.76RING-finger-containing E3 ubiquitin ligase [Phytop... [more]
gi|695388843|ref|XP_009519281.1|8.043e-7034.40hypothetical protein PHYSODRAFT_487639 [Phytophtho... [more]
gi|675165731|ref|XP_008891750.1|1.249e-6935.00hypothetical protein PPTG_02428 [Phytophthora para... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna727rna727Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications