EWM23402.1, cds7262 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23402.1 vs. NCBI_GenBank
Match: gi|585104418|gb|EWM23402.1| (dynein heavy chain [Nannochloropsis gaditana]) HSP 1 Score: 510.375 bits (1313), Expect = 0.000e+0 Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0
Query: 1 MQRIISKVKITLQQLQLAIKGEVVMSEELASTLLAVYDAKVPHSWVFTVAGDEFSWILPTLGLWFSSLLQRDEQLRTWLNHGRPNSYWLPGFSNPQGLLTAMKQEVTRRHKADKWALDDVVYHTEVTSYERPEQIRSPPSEGIYVYGLSLEGAGWNKIEGTLVESEAKKLFVPLPVLHVTANTKSEEFKVRKDIFGTQGPYEAPCYKYPCRTDRFMVMMVTLKGGDRPPTHWALRGTALLCNIEG 245
MQRIISKVKITLQQLQLAIKGEVVMSEELASTLLAVYDAKVPHSWVFTVAGDEFSWILPTLGLWFSSLLQRDEQLRTWLNHGRPNSYWLPGFSNPQGLLTAMKQEVTRRHKADKWALDDVVYHTEVTSYERPEQIRSPPSEGIYVYGLSLEGAGWNKIEGTLVESEAKKLFVPLPVLHVTANTKSEEFKVRKDIFGTQGPYEAPCYKYPCRTDRFMVMMVTLKGGDRPPTHWALRGTALLCNIEG
Sbjct: 1 MQRIISKVKITLQQLQLAIKGEVVMSEELASTLLAVYDAKVPHSWVFTVAGDEFSWILPTLGLWFSSLLQRDEQLRTWLNHGRPNSYWLPGFSNPQGLLTAMKQEVTRRHKADKWALDDVVYHTEVTSYERPEQIRSPPSEGIYVYGLSLEGAGWNKIEGTLVESEAKKLFVPLPVLHVTANTKSEEFKVRKDIFGTQGPYEAPCYKYPCRTDRFMVMMVTLKGGDRPPTHWALRGTALLCNIEG 245
BLAST of EWM23402.1 vs. NCBI_GenBank
Match: gi|298708134|emb|CBJ30475.1| (dynein heavy chain [Ectocarpus siliculosus]) HSP 1 Score: 374.015 bits (959), Expect = 1.124e-115 Identity = 171/245 (69.80%), Postives = 205/245 (83.67%), Query Frame = 0
Query: 1 MQRIISKVKITLQQLQLAIKGEVVMSEELASTLLAVYDAKVPHSWVFTVAGDEFSWILPTLGLWFSSLLQRDEQLRTWLNHGRPNSYWLPGFSNPQGLLTAMKQEVTRRHKADKWALDDVVYHTEVTSYERPEQIRSPPSEGIYVYGLSLEGAGWNKIEGTLVESEAKKLFVPLPVLHVTANTKSEEFKVRKDIFGTQGPYEAPCYKYPCRTDRFMVMMVTLKGG-DRPPTHWALRGTALLCNIE 244
+Q++I+KV+ L QLQ AIKGEVVM+EEL TL AVYDAKVP W FT+ GDEFSWILPTLGLWFSSL+ RDEQ RTWLN+GRP YWL GF NPQG+LTAMKQEVTR+HKA+KWALDDVVYHTEVTSYER EQ+RSPP+EG+Y++GL L+GA W+K EG +VESE KKLFV LPVL V+ANTKS++ KV++++FG QGP+E PCYKY RTDR+++ MV LK ++ P W LRGTALLCN +
Sbjct: 4397 LQKVIAKVRSILTQLQQAIKGEVVMTEELQETLYAVYDAKVPRLWAFTITGDEFSWILPTLGLWFSSLITRDEQDRTWLNNGRPTCYWLTGFFNPQGMLTAMKQEVTRKHKAEKWALDDVVYHTEVTSYERMEQVRSPPAEGVYIHGLFLDGAAWSKQEGVMVESEPKKLFVSLPVLFVSANTKSDQVKVKREMFGAQGPFECPCYKYSARTDRYIIFMVNLKCTMEKNPQFWTLRGTALLCNTD 4641
BLAST of EWM23402.1 vs. NCBI_GenBank
Match: gi|1173947926|gb|OQR96095.1| (dynein heavy chain [Achlya hypogyna]) HSP 1 Score: 365.155 bits (936), Expect = 1.411e-112 Identity = 169/246 (68.70%), Postives = 202/246 (82.11%), Query Frame = 0
Query: 1 MQRIISKVKITLQQLQLAIKGEVVMSEELASTLLAVYDAKVPHSWVFTVAGDEFSWILPTLGLWFSSLLQRDEQLRTWLNHGRPNSYWLPGFSNPQGLLTAMKQEVTRRH-KADKWALDDVVYHTEVTSYERPEQIRSPPSEGIYVYGLSLEGAGWNKIEGTLVESEAKKLFVPLPVLHVTANTKSEEFKVRKDIFGTQGPYEAPCYKYPCRTDRFMVMMVTLKG-GDRPPTHWALRGTALLCNIE 244
+QR+ISKV+ L QLQ+AI+GEVVM+EEL+ TL A++DAKVP SW+ T GDEFSWILPTLGLWFSSLL RDEQ RTWLN RPN +WL GF NPQG+LTAMKQEVTR+H K DKWALDDVVYHTEVT++ER EQ+R PP+EGI +YGL L+GA W+K +GTLVESE KKLF LPVLHV + +K E K RK+++G+ GP+E PCYKYP RTDR+++ MVT+K +RPP HW LRG ALLCN E
Sbjct: 4337 LQRVISKVRTMLSQLQMAIRGEVVMTEELSWTLNAIFDAKVPPSWLRTSVGDEFSWILPTLGLWFSSLLSRDEQSRTWLNTRRPNCFWLTGFFNPQGMLTAMKQEVTRKHSKTDKWALDDVVYHTEVTTFERAEQVRQPPAEGILIYGLFLDGATWSKADGTLVESEPKKLFTSLPVLHVNSMSKELEMKSRKELYGSIGPFECPCYKYPMRTDRYIIFMVTMKCPSNRPPRHWGLRGVALLCNTE 4582
BLAST of EWM23402.1 vs. NCBI_GenBank
Match: gi|673032676|ref|XP_008870299.1| (hypothetical protein H310_06866 [Aphanomyces invadans] >gi|574474299|gb|ETW01301.1| hypothetical protein H310_06866 [Aphanomyces invadans]) HSP 1 Score: 364.77 bits (935), Expect = 2.245e-112 Identity = 168/246 (68.29%), Postives = 203/246 (82.52%), Query Frame = 0
Query: 1 MQRIISKVKITLQQLQLAIKGEVVMSEELASTLLAVYDAKVPHSWVFTVAGDEFSWILPTLGLWFSSLLQRDEQLRTWLNHGRPNSYWLPGFSNPQGLLTAMKQEVTRRH-KADKWALDDVVYHTEVTSYERPEQIRSPPSEGIYVYGLSLEGAGWNKIEGTLVESEAKKLFVPLPVLHVTANTKSEEFKVRKDIFGTQGPYEAPCYKYPCRTDRFMVMMVTLKG-GDRPPTHWALRGTALLCNIE 244
+QR+ISKV+ L QLQ+AI+GEVVM+EEL+ TL A++DAKVP SW+ T GDEFSWILPTLGLWFSSLL RDEQ RTWLN RPN +WL GF NPQG+LTAMKQEVTR+H K DKWALDDVVYHTEVT++ER EQ+R+PP+EG+ +YGL L+GA W+K +GTLVESE KKLF LPVLHV + +K E K RK+++G+ GP+E PCYKYP RTDR+++ MVT+K +RPP HW LRG ALLCN E
Sbjct: 4338 LQRVISKVRTMLSQLQMAIRGEVVMTEELSWTLNAIFDAKVPPSWLRTSVGDEFSWILPTLGLWFSSLLSRDEQSRTWLNTRRPNCFWLTGFFNPQGMLTAMKQEVTRKHSKTDKWALDDVVYHTEVTTFERAEQVRTPPAEGVLIYGLFLDGATWSKADGTLVESEPKKLFTSLPVLHVNSMSKELELKSRKELYGSIGPFECPCYKYPMRTDRYIIFMVTMKCPQNRPPRHWGLRGVALLCNTE 4583
BLAST of EWM23402.1 vs. NCBI_GenBank
Match: gi|1173961404|gb|OQS07437.1| (dynein heavy chain [Thraustotheca clavata]) HSP 1 Score: 363.999 bits (933), Expect = 3.435e-112 Identity = 169/246 (68.70%), Postives = 201/246 (81.71%), Query Frame = 0
Query: 1 MQRIISKVKITLQQLQLAIKGEVVMSEELASTLLAVYDAKVPHSWVFTVAGDEFSWILPTLGLWFSSLLQRDEQLRTWLNHGRPNSYWLPGFSNPQGLLTAMKQEVTRRH-KADKWALDDVVYHTEVTSYERPEQIRSPPSEGIYVYGLSLEGAGWNKIEGTLVESEAKKLFVPLPVLHVTANTKSEEFKVRKDIFGTQGPYEAPCYKYPCRTDRFMVMMVTLKG-GDRPPTHWALRGTALLCNIE 244
+QR+ISKV+ L QLQ+AI+GEVVM+EEL+ TL A++DAKVP SW+ T GDEFSWILPTLGLWFSSLL RDEQ RTWLN RPN +WL GF NPQG+LTAMKQEVTR+H K DKWALDDVVYHTEVT++ER EQ+R PP EGI +YGL L+GA W+K +GTLVESE KKLF LPVLHV + +K E K RK+++G+ GP+E PCYKYP RTDR+++ MVT+K +RPP HW LRG ALLCN E
Sbjct: 4337 LQRVISKVRTMLSQLQMAIRGEVVMTEELSGTLDAIFDAKVPPSWLRTSVGDEFSWILPTLGLWFSSLLSRDEQSRTWLNTRRPNCFWLTGFFNPQGMLTAMKQEVTRKHSKTDKWALDDVVYHTEVTTFERAEQVRQPPGEGILIYGLFLDGATWSKQDGTLVESEPKKLFTSLPVLHVNSMSKELEAKSRKELYGSIGPFECPCYKYPMRTDRYIIFMVTMKCPSNRPPRHWGLRGVALLCNTE 4582
BLAST of EWM23402.1 vs. NCBI_GenBank
Match: gi|698780141|ref|XP_009823114.1| (hypothetical protein H257_01548 [Aphanomyces astaci] >gi|574122775|gb|ETV88251.1| hypothetical protein H257_01548 [Aphanomyces astaci]) HSP 1 Score: 363.999 bits (933), Expect = 3.858e-112 Identity = 168/246 (68.29%), Postives = 202/246 (82.11%), Query Frame = 0
Query: 1 MQRIISKVKITLQQLQLAIKGEVVMSEELASTLLAVYDAKVPHSWVFTVAGDEFSWILPTLGLWFSSLLQRDEQLRTWLNHGRPNSYWLPGFSNPQGLLTAMKQEVTRRH-KADKWALDDVVYHTEVTSYERPEQIRSPPSEGIYVYGLSLEGAGWNKIEGTLVESEAKKLFVPLPVLHVTANTKSEEFKVRKDIFGTQGPYEAPCYKYPCRTDRFMVMMVTLKG-GDRPPTHWALRGTALLCNIE 244
+QR+ISKV+ L QLQ+AI+GEVVM+EEL+ TL A++DAKVP SW+ T GDEFSWILPTLGLWFSSLL RDEQ R WLN RPN +WL GF NPQG+LTAMKQEVTR+H K DKWALDDVVYHTEVT++ER EQ+R+PP+EGI +YGL L+GA W+K +GTLVESE KKLF LPVLHV + +K E K RK+++G+ GP+E PCYKYP RTDR+++ MVT+K +RPP HW LRG ALLCN E
Sbjct: 4338 LQRVISKVRTMLSQLQMAIRGEVVMTEELSWTLNAIFDAKVPPSWLRTSVGDEFSWILPTLGLWFSSLLSRDEQSRNWLNTRRPNCFWLTGFFNPQGMLTAMKQEVTRKHSKTDKWALDDVVYHTEVTTFERAEQVRTPPAEGILIYGLFLDGATWSKADGTLVESEPKKLFTSLPVLHVNSMSKDLELKSRKELYGSIGPFECPCYKYPMRTDRYIIFMVTMKCPQNRPPRHWGLRGVALLCNTE 4583
BLAST of EWM23402.1 vs. NCBI_GenBank
Match: gi|669155648|ref|XP_008613386.1| (hypothetical protein SDRG_09245 [Saprolegnia diclina VS20] >gi|530735021|gb|EQC33263.1| hypothetical protein SDRG_09245 [Saprolegnia diclina VS20]) HSP 1 Score: 361.303 bits (926), Expect = 3.601e-111 Identity = 168/246 (68.29%), Postives = 201/246 (81.71%), Query Frame = 0
Query: 1 MQRIISKVKITLQQLQLAIKGEVVMSEELASTLLAVYDAKVPHSWVFTVAGDEFSWILPTLGLWFSSLLQRDEQLRTWLNHGRPNSYWLPGFSNPQGLLTAMKQEVTRRH-KADKWALDDVVYHTEVTSYERPEQIRSPPSEGIYVYGLSLEGAGWNKIEGTLVESEAKKLFVPLPVLHVTANTKSEEFKVRKDIFGTQGPYEAPCYKYPCRTDRFMVMMVTLKG-GDRPPTHWALRGTALLCNIE 244
+QR+ISKV+ L QLQ+AI+GEVVM+EEL+ TL A++DAKVP SW+ T GDEFSWILPTLGLWFSSLL RDEQ R WLN RPN +WL GF NPQG+LTAMKQEVTR+H K DKWALDDVVYHTEVT++ER EQ+R PP+EGI +YGL L+GA W+K +GTLVESE KKLF LPVLHV + +K E K RK+++G+ GP+E PCYKYP RTDR+++ MVT+K +RPP HW LRG ALLCN E
Sbjct: 4337 LQRVISKVRTMLSQLQMAIRGEVVMTEELSWTLNAIFDAKVPPSWLRTSVGDEFSWILPTLGLWFSSLLSRDEQSRNWLNTRRPNCFWLTGFFNPQGMLTAMKQEVTRKHSKTDKWALDDVVYHTEVTTFERAEQVRQPPAEGILIYGLFLDGATWSKQDGTLVESEPKKLFTSLPVLHVNSMSKELENKSRKELYGSIGPFECPCYKYPMRTDRYIIFMVTMKCPSNRPPRHWGLRGVALLCNTE 4582
BLAST of EWM23402.1 vs. NCBI_GenBank
Match: gi|953502336|emb|CEG36522.1| (dynein heavy chain [Plasmopara halstedii]) HSP 1 Score: 360.533 bits (924), Expect = 6.817e-111 Identity = 167/246 (67.89%), Postives = 200/246 (81.30%), Query Frame = 0
Query: 1 MQRIISKVKITLQQLQLAIKGEVVMSEELASTLLAVYDAKVPHSWVFTVAGDEFSWILPTLGLWFSSLLQRDEQLRTWLNHGRPNSYWLPGFSNPQGLLTAMKQEVTRRH-KADKWALDDVVYHTEVTSYERPEQIRSPPSEGIYVYGLSLEGAGWNKIEGTLVESEAKKLFVPLPVLHVTANTKSEEFKVRKDIFGTQGPYEAPCYKYPCRTDRFMVMMVTLKG-GDRPPTHWALRGTALLCNIE 244
+QR+I+KV+ LQ LQ+AI+GEVVM+EEL+ TL A++DAKVP SW+ T GDEFSWILPTLGLWFSSL+ RDEQ RTWLN RPNS+WL GF NPQG+LTAMKQEVTR+H K DKWALDDVVYHTEVTS+ER EQ+R+PPSEG+Y+YGL ++GA W+K + T+VESE KKLF PLPVLHV + +K E K RK+++G GP+E PCYKY RTDR+ V MVT+K RPP HW LRG LLCN E
Sbjct: 4350 LQRVIAKVRSMLQSLQMAIRGEVVMTEELSWTLDAIFDAKVPPSWLRTSVGDEFSWILPTLGLWFSSLISRDEQNRTWLNTRRPNSFWLTGFFNPQGMLTAMKQEVTRKHSKTDKWALDDVVYHTEVTSFERAEQVRTPPSEGVYIYGLFMDGATWSKADSTIVESEPKKLFTPLPVLHVNSMSKELETKSRKELYGAAGPFECPCYKYATRTDRYFVFMVTMKCPPGRPPRHWGLRGVCLLCNTE 4595
BLAST of EWM23402.1 vs. NCBI_GenBank
Match: gi|570998897|gb|ETP55016.1| (hypothetical protein F442_00408 [Phytophthora parasitica P10297]) HSP 1 Score: 360.147 bits (923), Expect = 8.683e-111 Identity = 168/246 (68.29%), Postives = 200/246 (81.30%), Query Frame = 0
Query: 1 MQRIISKVKITLQQLQLAIKGEVVMSEELASTLLAVYDAKVPHSWVFTVAGDEFSWILPTLGLWFSSLLQRDEQLRTWLNHGRPNSYWLPGFSNPQGLLTAMKQEVTRRH-KADKWALDDVVYHTEVTSYERPEQIRSPPSEGIYVYGLSLEGAGWNKIEGTLVESEAKKLFVPLPVLHVTANTKSEEFKVRKDIFGTQGPYEAPCYKYPCRTDRFMVMMVTLKG-GDRPPTHWALRGTALLCNIE 244
+QR+ISKV+ LQ LQ+AI+GEVVM+EEL+ TL A++DAKVP SW+ T GDEFSWILPTLGLWFSSL+ RDEQ RTWLN RPNS+WL GF NPQG+LTAMKQEVTR+H K DKWALDDVVYHTEVTS+ER EQ+R+PPSEG+Y+YGL ++GA W+K +GT+VESE KKLF LPVLHV + +K E K RK+++G GP+E PCYKY RTDR+ V MVT+K RPP HW LRG LLCN E
Sbjct: 4377 LQRVISKVRSMLQSLQMAIRGEVVMTEELSWTLDAIFDAKVPPSWLRTSVGDEFSWILPTLGLWFSSLISRDEQNRTWLNTRRPNSFWLTGFFNPQGMLTAMKQEVTRKHSKTDKWALDDVVYHTEVTSFERAEQVRAPPSEGVYIYGLFMDGATWSKADGTIVESEPKKLFTSLPVLHVNSMSKELEAKSRKELYGAVGPFECPCYKYATRTDRYFVFMVTMKCPPGRPPRHWGLRGVCLLCNTE 4622
BLAST of EWM23402.1 vs. NCBI_GenBank
Match: gi|695392648|ref|XP_009520395.1| (hypothetical protein PHYSODRAFT_486395 [Phytophthora sojae] >gi|348685292|gb|EGZ25107.1| hypothetical protein PHYSODRAFT_486395 [Phytophthora sojae]) HSP 1 Score: 359.377 bits (921), Expect = 1.675e-110 Identity = 167/246 (67.89%), Postives = 200/246 (81.30%), Query Frame = 0
Query: 1 MQRIISKVKITLQQLQLAIKGEVVMSEELASTLLAVYDAKVPHSWVFTVAGDEFSWILPTLGLWFSSLLQRDEQLRTWLNHGRPNSYWLPGFSNPQGLLTAMKQEVTRRH-KADKWALDDVVYHTEVTSYERPEQIRSPPSEGIYVYGLSLEGAGWNKIEGTLVESEAKKLFVPLPVLHVTANTKSEEFKVRKDIFGTQGPYEAPCYKYPCRTDRFMVMMVTLKG-GDRPPTHWALRGTALLCNIE 244
+QR+I+KV+ LQ LQ+AI+GEVVM+EEL+ TL A++DAKVP SW+ T GDEFSWILPTLGLWFSSL+ RDEQ RTWLN RPNS+WL GF NPQG+LTAMKQEVTR+H K DKWALDDVVYHTEVTS+ER EQ+R+PPSEG+Y+YGL ++GA W+K +GT+VESE KKLF LPVLHV + +K E K RK+++G GP+E PCYKY RTDR+ V MVT+K RPP HW LRG LLCN E
Sbjct: 4332 LQRVIAKVRSMLQSLQMAIRGEVVMTEELSWTLDAIFDAKVPPSWLRTSVGDEFSWILPTLGLWFSSLISRDEQNRTWLNTRRPNSFWLTGFFNPQGMLTAMKQEVTRKHSKTDKWALDDVVYHTEVTSFERAEQVRAPPSEGVYIYGLFMDGATWSKADGTIVESEPKKLFTSLPVLHVNSMSKDLEAKSRKELYGAVGPFECPCYKYATRTDRYFVFMVTMKCPPGRPPRHWGLRGVCLLCNTE 4577 The following BLAST results are available for this feature:
BLAST of EWM23402.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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