EWM23423.1, cds7249 (CDS) Nannochloropsis gaditana

Overview
NameEWM23423.1
Unique Namecds7249
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002471.1:178620..178655 -
Alignment locationCM002471.1:178191..178541 -
Alignment locationCM002471.1:178085..178123 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM23423.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100843g1.3627.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:178620..178655 -
CM002471.1supercontigCM002471.1:178191..178541 -
CM002471.1supercontigCM002471.1:178085..178123 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM23423.1 vs. NCBI_GenBank
Match: gi|585104444|gb|EWM23423.1| (hypothetical protein Naga_100843g1 [Nannochloropsis gaditana])

HSP 1 Score: 290.426 bits (742), Expect = 1.947e-99
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0 
Query:    1 MGNQVSAKIPSSKRSLDGDTSSGTHVHRHQQPKGEQHANPSDVESEDNILHFAQSFPARLVDAATVDAALLPSPTQTSSPGQPSSAVSFMPPMSPRASVPPRGKFFGRAVTANQAAIREGNNTENYGMPKPRRCWRRPLPM 141
            MGNQVSAKIPSSKRSLDGDTSSGTHVHRHQQPKGEQHANPSDVESEDNILHFAQSFPARLVDAATVDAALLPSPTQTSSPGQPSSAVSFMPPMSPRASVPPRGKFFGRAVTANQAAIREGNNTENYGMPKPRRCWRRPLPM
Sbjct:    1 MGNQVSAKIPSSKRSLDGDTSSGTHVHRHQQPKGEQHANPSDVESEDNILHFAQSFPARLVDAATVDAALLPSPTQTSSPGQPSSAVSFMPPMSPRASVPPRGKFFGRAVTANQAAIREGNNTENYGMPKPRRCWRRPLPM 141
The following BLAST results are available for this feature:
BLAST of EWM23423.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585104444|gb|EWM23423.1|1.947e-99100.00hypothetical protein Naga_100843g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7266rna7266Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications