EWM23434.1, cds7238 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23434.1 vs. NCBI_GenBank
Match: gi|585104461|gb|EWM23434.1| (kelch repeat containing protein, partial [Nannochloropsis gaditana]) HSP 1 Score: 649.047 bits (1673), Expect = 0.000e+0 Identity = 312/312 (100.00%), Postives = 312/312 (100.00%), Query Frame = 0 Query: 1 MGNSTSIDPPGDDTRITDFRPQPPALNSGSAPTVRTTENVQTPGQEDLSLANIVPVSLQSNGITHTPAPSRPQAPPRSMLARRPSRERTGGTVGKKGDGNRSDWVWENSHWTKLKANKDKDREVPKCRSGHACVQIGHYMYIIGGYSDGICFSDVYILDLNSHLWRHVENSGTVVQGRASHCCCIGPGNRDIYMFGGSGPCWGRTNLGDLCKFDTEKEEWSIMPLRGQMPPPGYGQSLCVYKHRLILFGGTCGSFFYNHLFEYDTKEQVGRRDGVEGRKGGREGGGRKHALLTQASAVVFFQKLTRVSPIPS 312 MGNSTSIDPPGDDTRITDFRPQPPALNSGSAPTVRTTENVQTPGQEDLSLANIVPVSLQSNGITHTPAPSRPQAPPRSMLARRPSRERTGGTVGKKGDGNRSDWVWENSHWTKLKANKDKDREVPKCRSGHACVQIGHYMYIIGGYSDGICFSDVYILDLNSHLWRHVENSGTVVQGRASHCCCIGPGNRDIYMFGGSGPCWGRTNLGDLCKFDTEKEEWSIMPLRGQMPPPGYGQSLCVYKHRLILFGGTCGSFFYNHLFEYDTKEQVGRRDGVEGRKGGREGGGRKHALLTQASAVVFFQKLTRVSPIPS Sbjct: 1 MGNSTSIDPPGDDTRITDFRPQPPALNSGSAPTVRTTENVQTPGQEDLSLANIVPVSLQSNGITHTPAPSRPQAPPRSMLARRPSRERTGGTVGKKGDGNRSDWVWENSHWTKLKANKDKDREVPKCRSGHACVQIGHYMYIIGGYSDGICFSDVYILDLNSHLWRHVENSGTVVQGRASHCCCIGPGNRDIYMFGGSGPCWGRTNLGDLCKFDTEKEEWSIMPLRGQMPPPGYGQSLCVYKHRLILFGGTCGSFFYNHLFEYDTKEQVGRRDGVEGRKGGREGGGRKHALLTQASAVVFFQKLTRVSPIPS 312
BLAST of EWM23434.1 vs. NCBI_GenBank
Match: gi|695382277|ref|XP_009517349.1| (hypothetical protein PHYSODRAFT_323522 [Phytophthora sojae] >gi|348690260|gb|EGZ30074.1| hypothetical protein PHYSODRAFT_323522 [Phytophthora sojae]) HSP 1 Score: 158.688 bits (400), Expect = 1.155e-41 Identity = 73/172 (42.44%), Postives = 104/172 (60.47%), Query Frame = 0 Query: 109 SHWTKLKANKDKDREVPKCRSGHACVQIGHYMYIIGGYSDGICFSDVYILDLNSHLWRHVENS-GTVVQGRASHCCCIGPGNRDIYMFGGSGPCWGRTNLGDLCKFDTEKEEWSIMPLRGQMPPPGYGQSLCVYKHRLILFGGTCGSFFYNHLFEYDTKEQVGRRDGVEGRK 279 S+WTK+ + + P RSGH+ + +G MY+ GGY+DG C +D+Y DL H W H+E S G GRASH C +Y+FGGSGP WG+TN+G L +F + W+I+ G PPPGYGQSLC ++L LFGGT G + N L+ +D ++ R++ G++ Sbjct: 41 SNWTKISTSGHR----PPVRSGHSSLVVGDMMYVFGGYNDGNCHNDIYAFDLIRHHWMHIETSNGISPDGRASHAWCTSTDKTKLYLFGGSGPHWGQTNMGKLLQFSIRDKNWTIVEAEGTQPPPGYGQSLCAINNKLYLFGGTSGHVYVNDLYVFDEVTKIWRKEETGGKR 208
BLAST of EWM23434.1 vs. NCBI_GenBank
Match: gi|675210655|ref|XP_008914212.1| (hypothetical protein PPTG_17991 [Phytophthora parasitica INRA-310] >gi|568085637|gb|ETN00541.1| hypothetical protein PPTG_17991 [Phytophthora parasitica INRA-310]) HSP 1 Score: 158.303 bits (399), Expect = 1.243e-41 Identity = 73/172 (42.44%), Postives = 106/172 (61.63%), Query Frame = 0 Query: 109 SHWTKLKANKDKDREVPKCRSGHACVQIGHYMYIIGGYSDGICFSDVYILDLNSHLWRHVENS-GTVVQGRASHCCCIGPGNRDIYMFGGSGPCWGRTNLGDLCKFDTEKEEWSIMPLRGQMPPPGYGQSLCVYKHRLILFGGTCGSFFYNHLFEYDTKEQVGRRDGVEGRK 279 S+WTK+ + + P RSGH+ + +G MY+ GGY+DG C +D+Y DL H W H+E S G GRASH C +Y+FGGSGP WG+TN+G L +F+ + W+I+ +G PPPGYGQSLC ++L LFGGT G + N L+ +D +V +++ G++ Sbjct: 41 SNWTKISTSGHR----PPVRSGHSSLVVGDMMYVFGGYNDGNCHNDIYAFDLVRHHWIHIETSNGISPDGRASHAWCTSTDKTKLYLFGGSGPHWGQTNMGKLLQFNIRDKNWTIVEAQGTQPPPGYGQSLCAINNKLYLFGGTSGHVYVNDLYVFDEVTKVWKKEETGGKR 208
BLAST of EWM23434.1 vs. NCBI_GenBank
Match: gi|566010261|gb|ETI33172.1| (hypothetical protein F443_20126 [Phytophthora parasitica P1569] >gi|568005885|gb|ETL80163.1| hypothetical protein L917_19320 [Phytophthora parasitica] >gi|568035783|gb|ETM33411.1| hypothetical protein L914_19355 [Phytophthora parasitica] >gi|570313960|gb|ETO61908.1| hypothetical protein F444_20140 [Phytophthora parasitica P1976]) HSP 1 Score: 158.303 bits (399), Expect = 1.269e-41 Identity = 73/172 (42.44%), Postives = 106/172 (61.63%), Query Frame = 0 Query: 109 SHWTKLKANKDKDREVPKCRSGHACVQIGHYMYIIGGYSDGICFSDVYILDLNSHLWRHVENS-GTVVQGRASHCCCIGPGNRDIYMFGGSGPCWGRTNLGDLCKFDTEKEEWSIMPLRGQMPPPGYGQSLCVYKHRLILFGGTCGSFFYNHLFEYDTKEQVGRRDGVEGRK 279 S+WTK+ + + P RSGH+ + +G MY+ GGY+DG C +D+Y DL H W H+E S G GRASH C +Y+FGGSGP WG+TN+G L +F+ + W+I+ +G PPPGYGQSLC ++L LFGGT G + N L+ +D +V +++ G++ Sbjct: 41 SNWTKISTSGHR----PPVRSGHSSLVVGDMMYVFGGYNDGNCHNDIYAFDLVRHHWIHIETSNGISPDGRASHAWCTSTDKTKLYLFGGSGPHWGQTNMGKLLQFNIRDKNWTIVEAQGTQPPPGYGQSLCAINNKLYLFGGTSGHVYVNDLYVFDEVTKVWKKEETGGKR 208
BLAST of EWM23434.1 vs. NCBI_GenBank
Match: gi|567976392|gb|ETL26916.1| (hypothetical protein L916_19480 [Phytophthora parasitica]) HSP 1 Score: 158.303 bits (399), Expect = 1.310e-41 Identity = 73/172 (42.44%), Postives = 106/172 (61.63%), Query Frame = 0 Query: 109 SHWTKLKANKDKDREVPKCRSGHACVQIGHYMYIIGGYSDGICFSDVYILDLNSHLWRHVENS-GTVVQGRASHCCCIGPGNRDIYMFGGSGPCWGRTNLGDLCKFDTEKEEWSIMPLRGQMPPPGYGQSLCVYKHRLILFGGTCGSFFYNHLFEYDTKEQVGRRDGVEGRK 279 S+WTK+ + + P RSGH+ + +G MY+ GGY+DG C +D+Y DL H W H+E S G GRASH C +Y+FGGSGP WG+TN+G L +F+ + W+I+ +G PPPGYGQSLC ++L LFGGT G + N L+ +D +V +++ G++ Sbjct: 41 SNWTKISTSGHR----PPVRSGHSSLVVGDMMYVFGGYNDGNCHNDIYAFDLVRHHWIHIETSNGISPDGRASHAWCTSTDKTKLYLFGGSGPHWGQTNMGKLLQFNIRDKNWTIVEAQGTQPPPGYGQSLCAINNKLYLFGGTSGHVYVNDLYVFDEGTKVWKKEETGGKR 208
BLAST of EWM23434.1 vs. NCBI_GenBank
Match: gi|970662353|gb|KUF99748.1| (Kelch domain-containing protein 10 [Phytophthora nicotianae]) HSP 1 Score: 158.303 bits (399), Expect = 1.501e-41 Identity = 73/172 (42.44%), Postives = 106/172 (61.63%), Query Frame = 0 Query: 109 SHWTKLKANKDKDREVPKCRSGHACVQIGHYMYIIGGYSDGICFSDVYILDLNSHLWRHVENS-GTVVQGRASHCCCIGPGNRDIYMFGGSGPCWGRTNLGDLCKFDTEKEEWSIMPLRGQMPPPGYGQSLCVYKHRLILFGGTCGSFFYNHLFEYDTKEQVGRRDGVEGRK 279 S+WTK+ + + P RSGH+ + +G MY+ GGY+DG C +D+Y DL H W H+E S G GRASH C +Y+FGGSGP WG+TN+G L +F+ + W+I+ +G PPPGYGQSLC ++L LFGGT G + N L+ +D +V +++ G++ Sbjct: 41 SNWTKISTSGHR----PPVRSGHSSLVVGDMMYVFGGYNDGNCHNDIYXFDLVRHHWIHIETSNGISPDGRASHAWCTSTDKTKLYLFGGSGPHWGQTNMGKLLQFNIRDKNWTIVEAQGTQPPPGYGQSLCAINNKLYLFGGTSGHVYVNDLYVFDEVTKVWKKEETGGKR 208
BLAST of EWM23434.1 vs. NCBI_GenBank
Match: gi|570968035|gb|ETP31154.1| (hypothetical protein F442_19955 [Phytophthora parasitica P10297]) HSP 1 Score: 157.918 bits (398), Expect = 2.077e-41 Identity = 73/172 (42.44%), Postives = 105/172 (61.05%), Query Frame = 0 Query: 109 SHWTKLKANKDKDREVPKCRSGHACVQIGHYMYIIGGYSDGICFSDVYILDLNSHLWRHVENS-GTVVQGRASHCCCIGPGNRDIYMFGGSGPCWGRTNLGDLCKFDTEKEEWSIMPLRGQMPPPGYGQSLCVYKHRLILFGGTCGSFFYNHLFEYDTKEQVGRRDGVEGRK 279 S+WTK+ + + P RSGH+ + +G MY+ GGY+DG C +D+Y DL H W H+E S G GRASH C +Y+FGGSGP WG+TN+G L +F + W+I+ +G PPPGYGQSLC ++L LFGGT G + N L+ +D +V +++ G++ Sbjct: 41 SNWTKISTSGHR----PPVRSGHSSLVVGDMMYVFGGYNDGNCHNDIYAFDLVRHHWIHIETSNGISPDGRASHAWCTSTDKTKLYLFGGSGPHWGQTNMGKLLQFSIRDKNWTIVEAQGTQPPPGYGQSLCAINNKLYLFGGTSGHVYVNDLYVFDEVTKVWKKEETGGKR 208
BLAST of EWM23434.1 vs. NCBI_GenBank
Match: gi|570937746|gb|ETP03003.1| (hypothetical protein F441_20006 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 157.918 bits (398), Expect = 2.143e-41 Identity = 73/172 (42.44%), Postives = 105/172 (61.05%), Query Frame = 0 Query: 109 SHWTKLKANKDKDREVPKCRSGHACVQIGHYMYIIGGYSDGICFSDVYILDLNSHLWRHVENS-GTVVQGRASHCCCIGPGNRDIYMFGGSGPCWGRTNLGDLCKFDTEKEEWSIMPLRGQMPPPGYGQSLCVYKHRLILFGGTCGSFFYNHLFEYDTKEQVGRRDGVEGRK 279 S+WTK+ + + P RSGH+ + +G MY+ GGY+DG C +D+Y DL H W H+E S G GRASH C +Y+FGGSGP WG+TN+G L +F + W+I+ +G PPPGYGQSLC ++L LFGGT G + N L+ +D +V +++ G++ Sbjct: 41 SNWTKISTSGHR----PPVRSGHSSLVVGDMMYVFGGYNDGNCHNDIYAFDLVRHHWIHIETSNGISPDGRASHAWCTSTDKTKLYLFGGSGPHWGQTNMGKLLQFSIRDKNWTIVEAQGTQPPPGYGQSLCAINNKLYLFGGTSGHVYVNDLYVFDEVTKVWKKEETGGKR 208
BLAST of EWM23434.1 vs. NCBI_GenBank
Match: gi|567947712|gb|ETK73486.1| (hypothetical protein L915_19589 [Phytophthora parasitica]) HSP 1 Score: 157.918 bits (398), Expect = 2.166e-41 Identity = 73/172 (42.44%), Postives = 105/172 (61.05%), Query Frame = 0 Query: 109 SHWTKLKANKDKDREVPKCRSGHACVQIGHYMYIIGGYSDGICFSDVYILDLNSHLWRHVENS-GTVVQGRASHCCCIGPGNRDIYMFGGSGPCWGRTNLGDLCKFDTEKEEWSIMPLRGQMPPPGYGQSLCVYKHRLILFGGTCGSFFYNHLFEYDTKEQVGRRDGVEGRK 279 S+WTK+ + + P RSGH+ + +G MY+ GGY+DG C +D+Y DL H W H+E S G GRASH C +Y+FGGSGP WG+TN+G L +F + W+I+ +G PPPGYGQSLC ++L LFGGT G + N L+ +D +V +++ G++ Sbjct: 41 SNWTKISTSGHR----PPVRSGHSSLVVGDMMYVFGGYNDGNCHNDIYAFDLVRHHWIHIETSNGISPDGRASHAWCTSTDKTKLYLFGGSGPHWGQTNMGKLLQFSIRDKNWTIVEAQGTQPPPGYGQSLCAINNKLYLFGGTSGHVYVNDLYVFDEVTKVWKKEETGGKR 208
BLAST of EWM23434.1 vs. NCBI_GenBank
Match: gi|1214702232|gb|OWZ14461.1| (hypothetical protein PHMEG_00012068 [Phytophthora megakarya]) HSP 1 Score: 157.918 bits (398), Expect = 2.191e-41 Identity = 71/172 (41.28%), Postives = 105/172 (61.05%), Query Frame = 0 Query: 109 SHWTKLKANKDKDREVPKCRSGHACVQIGHYMYIIGGYSDGICFSDVYILDLNSHLWRHVENS-GTVVQGRASHCCCIGPGNRDIYMFGGSGPCWGRTNLGDLCKFDTEKEEWSIMPLRGQMPPPGYGQSLCVYKHRLILFGGTCGSFFYNHLFEYDTKEQVGRRDGVEGRK 279 S+WTK+ + + P RSGH+ + +G MY+ GGY+DG C +D+Y DL H W H+E S G GRASH C +Y+FGGSGP WG+TN+G L +F+ + W+I+ G PPPGYGQS+C ++L LFGGT G + N L+ +D ++ +++ G++ Sbjct: 40 SNWTKISTSGHR----PPVRSGHSSLVVGDMMYVFGGYNDGNCHNDIYAFDLVRHHWLHIETSNGISPDGRASHAWCTSTDKTKLYLFGGSGPHWGQTNMGKLLQFNIRDKNWTIVDAEGTQPPPGYGQSMCAINNKLYLFGGTSGHVYVNDLYVFDEVTKIWKKEETSGKR 207 The following BLAST results are available for this feature:
BLAST of EWM23434.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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