EWM23455.1, cds7217 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23455.1 vs. NCBI_GenBank
Match: gi|585104500|gb|EWM23455.1| (p-type atpase [Nannochloropsis gaditana]) HSP 1 Score: 824.313 bits (2128), Expect = 0.000e+0 Identity = 412/412 (100.00%), Postives = 412/412 (100.00%), Query Frame = 0
Query: 1 MGRVAVGNTRFLEEVEGVAFSPTAPASFPTRPSPPGNETRGGRGGGRKPLTEIRKALEAQGKTVVFVAAERRLQGLLAVSDKPRPDAARTVAALHRMGIQVWMLTGDSRAAAEAVAHSIGIKHVQAGTLPGQKAKKIQALQARGHRVCMLGDGINDSPALAQADVGVAIGTGAQVACEAADLILLHNSLPDLVTALHLARTVFRRIQLNMLWALGYNLIGIPFAAGAFLPILGWRLPPGYSGACSSLPARASRLPRLARDVMCWLTLSTLPPPFGLSVSPLPPPLQKRSGHDYVLPLCRHLLLGPPLLPTARLGQSWLDFCPAWARKTGEEGKDSLAAAAIGAGGSGAGGRRGRGQEERNEPRASGFRRFYGVFHLAGVGACSLSHHEHSHIPPIKSFSAVATHARLHAFGR 412
MGRVAVGNTRFLEEVEGVAFSPTAPASFPTRPSPPGNETRGGRGGGRKPLTEIRKALEAQGKTVVFVAAERRLQGLLAVSDKPRPDAARTVAALHRMGIQVWMLTGDSRAAAEAVAHSIGIKHVQAGTLPGQKAKKIQALQARGHRVCMLGDGINDSPALAQADVGVAIGTGAQVACEAADLILLHNSLPDLVTALHLARTVFRRIQLNMLWALGYNLIGIPFAAGAFLPILGWRLPPGYSGACSSLPARASRLPRLARDVMCWLTLSTLPPPFGLSVSPLPPPLQKRSGHDYVLPLCRHLLLGPPLLPTARLGQSWLDFCPAWARKTGEEGKDSLAAAAIGAGGSGAGGRRGRGQEERNEPRASGFRRFYGVFHLAGVGACSLSHHEHSHIPPIKSFSAVATHARLHAFGR
Sbjct: 1 MGRVAVGNTRFLEEVEGVAFSPTAPASFPTRPSPPGNETRGGRGGGRKPLTEIRKALEAQGKTVVFVAAERRLQGLLAVSDKPRPDAARTVAALHRMGIQVWMLTGDSRAAAEAVAHSIGIKHVQAGTLPGQKAKKIQALQARGHRVCMLGDGINDSPALAQADVGVAIGTGAQVACEAADLILLHNSLPDLVTALHLARTVFRRIQLNMLWALGYNLIGIPFAAGAFLPILGWRLPPGYSGACSSLPARASRLPRLARDVMCWLTLSTLPPPFGLSVSPLPPPLQKRSGHDYVLPLCRHLLLGPPLLPTARLGQSWLDFCPAWARKTGEEGKDSLAAAAIGAGGSGAGGRRGRGQEERNEPRASGFRRFYGVFHLAGVGACSLSHHEHSHIPPIKSFSAVATHARLHAFGR 412
BLAST of EWM23455.1 vs. NCBI_GenBank
Match: gi|585104499|gb|EWM23454.1| (p-type atpase [Nannochloropsis gaditana]) HSP 1 Score: 546.199 bits (1406), Expect = 0.000e+0 Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 0
Query: 97 MGIQVWMLTGDSRAAAEAVAHSIGIKHVQAGTLPGQKAKKIQALQARGHRVCMLGDGINDSPALAQADVGVAIGTGAQVACEAADLILLHNSLPDLVTALHLARTVFRRIQLNMLWALGYNLIGIPFAAGAFLPILGWRLPPGYSGACSSLPARASRLPRLARDVMCWLTLSTLPPPFGLSVSPLPPPLQKRSGHDYVLPLCRHLLLGPPLLPTARLGQSWLDFCPAWARKTGEEGKDSLAAAAIGAGGSGAGGRRGRGQEERNEPRASGFR 368
MGIQVWMLTGDSRAAAEAVAHSIGIKHVQAGTLPGQKAKKIQALQARGHRVCMLGDGINDSPALAQADVGVAIGTGAQVACEAADLILLHNSLPDLVTALHLARTVFRRIQLNMLWALGYNLIGIPFAAGAFLPILGWRLPPGYSGACSSLPARASRLPRLARDVMCWLTLSTLPPPFGLSVSPLPPPLQKRSGHDYVLPLCRHLLLGPPLLPTARLGQSWLDFCPAWARKTGEEGKDSLAAAAIGAGGSGAGGRRGRGQEERNEPRASGFR
Sbjct: 1 MGIQVWMLTGDSRAAAEAVAHSIGIKHVQAGTLPGQKAKKIQALQARGHRVCMLGDGINDSPALAQADVGVAIGTGAQVACEAADLILLHNSLPDLVTALHLARTVFRRIQLNMLWALGYNLIGIPFAAGAFLPILGWRLPPGYSGACSSLPARASRLPRLARDVMCWLTLSTLPPPFGLSVSPLPPPLQKRSGHDYVLPLCRHLLLGPPLLPTARLGQSWLDFCPAWARKTGEEGKDSLAAAAIGAGGSGAGGRRGRGQEERNEPRASGFR 272
BLAST of EWM23455.1 vs. NCBI_GenBank
Match: gi|66809993|ref|XP_638720.1| (P-type ATPase [Dictyostelium discoideum AX4] >gi|60467380|gb|EAL65411.1| P-type ATPase [Dictyostelium discoideum AX4]) HSP 1 Score: 211.846 bits (538), Expect = 4.409e-57 Identity = 104/243 (42.80%), Postives = 154/243 (63.37%), Query Frame = 0
Query: 3 RVAVGNTRFLEEVEGVAFSPTAPASFPTRPSPPGNETRGGRGGGRKPLTEIR---KALEAQGKTVVFVAAERRLQGLLAVSDKPRPDAARTVAALHRMGIQVWMLTGDSRAAAEAVAHSIGIKHVQAGTLPGQKAKKIQALQARGHRVCMLGDGINDSPALAQADVGVAIGTGAQVACEAADLILLHNSLPDLVTALHLARTVFRRIQLNMLWALGYNLIGIPFAAGAFLPILGWRLPPGYSG 242
+ +GN ++++ EG+++ PT S P R + L+ I + LE+ G TVV+V +R+L G +A+SD+ +P+A T+ L++MGI WM+TGD+ A A+A +GI V A LP K+KK+ L+ GH V M+GDGINDSPALA+ADVG+AIG G +A EAAD++L+ + L D++TA+ L++T F RI+ N LWA YN++GIP AAG +P G +PP +G
Sbjct: 665 EIMIGNLKWIKS-EGISYDPTLTIS-PDRSINNNHHHNDDDDDDEGTLSHIEDQVRRLESDGNTVVYVVIDRQLMGYIAISDQLKPEAHATITELNKMGICTWMVTGDNPRTANAIAQQVGIDQVFAEVLPSNKSKKVMELKKMGHTVAMIGDGINDSPALAEADVGIAIGAGTDIAIEAADIVLVKSDLRDVITAISLSKTTFNRIRFNYLWATLYNILGIPLAAGLLIP-FGISIPPMMAG 904
BLAST of EWM23455.1 vs. NCBI_GenBank
Match: gi|566022738|gb|ETI45649.1| (hypothetical protein F443_09849, partial [Phytophthora parasitica P1569]) HSP 1 Score: 199.519 bits (506), Expect = 9.741e-57 Identity = 95/193 (49.22%), Postives = 137/193 (70.98%), Query Frame = 0
Query: 57 LEAQGKTVVFVAAERRLQGLLAVSDKPRPDAARTVAALHRMGIQVWMLTGDSRAAAEAVAHSIGIKHVQAGTLPGQKAKKIQALQARGH-------RVCMLGDGINDSPALAQADVGVAIGTGAQVACEAADLILLHNSLPDLVTALHLARTVFRRIQLNMLWALGYNLIGIPFAAGAFLPILGWRLPPGYSG 242
LE +GKTVV V E +L G++A++D PRP+AA + L MG+ VW++TGD+ A A+A +GI HV+A LPG+KA +I+ALQ++ + VCM+GDGIND+PALAQ+D+G+AIG G Q+A AD++L+ ++L D+V AL LAR VF RI+LN +++ YN +GIP AAG F P++ +PP +G
Sbjct: 148 LELEGKTVVVVCVENKLVGVIALADAPRPEAAAVIKHLKSMGLDVWLITGDNLRTASAIARQMGISHVKAVALPGEKAAQIKALQSQVNPLTLKPRIVCMVGDGINDAPALAQSDIGMAIGAGTQIAKAEADMVLVKSALTDVVVALDLARVVFSRIKLNFFFSIIYNAVGIPLAAGMFFPLIHRMMPPACAG 340
BLAST of EWM23455.1 vs. NCBI_GenBank
Match: gi|299117411|emb|CBN73914.1| (heavy metal translocating P-type ATPase [Ectocarpus siliculosus]) HSP 1 Score: 211.075 bits (536), Expect = 1.722e-56 Identity = 104/185 (56.22%), Postives = 134/185 (72.43%), Query Frame = 0
Query: 56 ALEAQGKTVVFVAAERRLQGLLAVSDKPRPDAARTVAALHRMGIQVWMLTGDSRAAAEAVAHSIGI--KHVQAGTLPGQKAKKIQALQARGHRVCMLGDGINDSPALAQADVGVAIGTGAQVACEAADLILLHNSLPDLVTALHLARTVFRRIQLNMLWALGYNLIGIPFAAGAFLPILGWRLPP 238
+LE QGKTVVFVA +G+LAV+D RP+A V LHRMGI VW++TGD+RA AEAVA +GI V AG LP K++K+Q LQ G V M+GDG+NDSPALA ADVG+A+G G QVA EAAD++L+ + L D+V +LHL+R VFRRI++N +WAL YN++ +P AAG P LG + P
Sbjct: 1095 SLEWQGKTVVFVAGGGETKGVLAVADSVRPEAREAVGTLHRMGISVWVVTGDNRATAEAVAAIVGIPRGKVMAGVLPADKSRKVQELQRMGQAVAMVGDGVNDSPALAMADVGIAVGAGTQVAVEAADMVLVRSDLRDVVVSLHLSRAVFRRIRMNFVWALSYNVVALPLAAGLLKPWLGLGVTP 1279
BLAST of EWM23455.1 vs. NCBI_GenBank
Match: gi|567960025|gb|ETK85589.1| (hypothetical protein L915_09653 [Phytophthora parasitica]) HSP 1 Score: 200.29 bits (508), Expect = 1.901e-56 Identity = 95/193 (49.22%), Postives = 138/193 (71.50%), Query Frame = 0
Query: 57 LEAQGKTVVFVAAERRLQGLLAVSDKPRPDAARTVAALHRMGIQVWMLTGDSRAAAEAVAHSIGIKHVQAGTLPGQKAKKIQALQARGH-------RVCMLGDGINDSPALAQADVGVAIGTGAQVACEAADLILLHNSLPDLVTALHLARTVFRRIQLNMLWALGYNLIGIPFAAGAFLPILGWRLPPGYSG 242
LE +GKTVV V E +L G++A++D PRP+AA + L MG+ VW++TGD+ A A+A +GI HV+A LPG+KA +I+ALQ++ + VCM+GDGIND+PALAQ+D+G+AIG G Q+A AD++L+ ++L D+V AL LAR VF RI+LN +++ YN++GIP AAG F P++ +PP +G
Sbjct: 148 LELEGKTVVVVCVENKLVGVIALADAPRPEAAAVIKHLKSMGLDVWLITGDNLRTASAIARQMGISHVKAVALPGEKAAQIKALQSQVNPLTLKPRIVCMVGDGINDAPALAQSDIGMAIGAGTQIAKAEADMVLVKSALTDVVVALDLARVVFSRIKLNFFFSIIYNVVGIPLAAGMFFPLIHRMMPPACAG 340
BLAST of EWM23455.1 vs. NCBI_GenBank
Match: gi|567988759|gb|ETL39032.1| (hypothetical protein L916_09551 [Phytophthora parasitica] >gi|568017976|gb|ETL92153.1| hypothetical protein L917_09476 [Phytophthora parasitica]) HSP 1 Score: 200.29 bits (508), Expect = 1.928e-56 Identity = 95/193 (49.22%), Postives = 138/193 (71.50%), Query Frame = 0
Query: 57 LEAQGKTVVFVAAERRLQGLLAVSDKPRPDAARTVAALHRMGIQVWMLTGDSRAAAEAVAHSIGIKHVQAGTLPGQKAKKIQALQARGH-------RVCMLGDGINDSPALAQADVGVAIGTGAQVACEAADLILLHNSLPDLVTALHLARTVFRRIQLNMLWALGYNLIGIPFAAGAFLPILGWRLPPGYSG 242
LE +GKTVV V E +L G++A++D PRP+AA + L MG+ VW++TGD+ A A+A +GI HV+A LPG+KA +I+ALQ++ + VCM+GDGIND+PALAQ+D+G+AIG G Q+A AD++L+ ++L D+V AL LAR VF RI+LN +++ YN++GIP AAG F P++ +PP +G
Sbjct: 148 LELEGKTVVVVCVENKLVGVIALADAPRPEAAAVIKHLKSMGLDVWLITGDNLRTASAIARQMGISHVKAVALPGEKAAQIKALQSQVNPLTLKPRIVCMVGDGINDAPALAQSDIGMAIGAGTQIAKAEADMVLVKSALTDVVVALDLARVVFSRIKLNFFFSIIYNVVGIPLAAGMFFPLIHRMMPPACAG 340
BLAST of EWM23455.1 vs. NCBI_GenBank
Match: gi|570326352|gb|ETO74300.1| (hypothetical protein F444_09942 [Phytophthora parasitica P1976]) HSP 1 Score: 199.134 bits (505), Expect = 5.797e-56 Identity = 95/193 (49.22%), Postives = 137/193 (70.98%), Query Frame = 0
Query: 57 LEAQGKTVVFVAAERRLQGLLAVSDKPRPDAARTVAALHRMGIQVWMLTGDSRAAAEAVAHSIGIKHVQAGTLPGQKAKKIQALQARGH-------RVCMLGDGINDSPALAQADVGVAIGTGAQVACEAADLILLHNSLPDLVTALHLARTVFRRIQLNMLWALGYNLIGIPFAAGAFLPILGWRLPPGYSG 242
LE +GKTVV V E +L G++A++D PRP+AA + L MG+ VW++TGD+ A A+A +GI HV+A LPG+KA +I+ALQ++ + VCM+GDGIND+PALAQ+D+G+AIG G Q+A AD++L+ ++L D+V AL LAR VF RI+LN +++ YN +GIP AAG F P++ +PP +G
Sbjct: 148 LELEGKTVVVVCVENKLVGVIALADAPRPEAAAVIKHLKSMGLDVWLITGDNLRTASAIARQMGISHVKAVALPGEKAAQIKALQSQVNPLTLKPRIVCMVGDGINDAPALAQSDIGMAIGAGTQIAKAEADMVLVKSALTDVVVALDLARVVFSRIKLNFFFSIIYNAVGIPLAAGMFFPLIHRMMPPACAG 340
BLAST of EWM23455.1 vs. NCBI_GenBank
Match: gi|568017963|gb|ETL92140.1| (hypothetical protein L917_09480 [Phytophthora parasitica] >gi|568048384|gb|ETM45438.1| hypothetical protein L914_09520 [Phytophthora parasitica] >gi|570950181|gb|ETP15438.1| hypothetical protein F441_09800 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 199.134 bits (505), Expect = 5.962e-56 Identity = 95/193 (49.22%), Postives = 137/193 (70.98%), Query Frame = 0
Query: 57 LEAQGKTVVFVAAERRLQGLLAVSDKPRPDAARTVAALHRMGIQVWMLTGDSRAAAEAVAHSIGIKHVQAGTLPGQKAKKIQALQARGH-------RVCMLGDGINDSPALAQADVGVAIGTGAQVACEAADLILLHNSLPDLVTALHLARTVFRRIQLNMLWALGYNLIGIPFAAGAFLPILGWRLPPGYSG 242
LE +GKTVV V E +L G++A++D PRP+AA + L MG+ VW++TGD+ A A+A +GI HV+A LPG+KA +I+ALQ++ + VCM+GDGIND+PALAQ+D+G+AIG G Q+A AD++L+ ++L D+V AL LAR VF RI+LN +++ YN +GIP AAG F P++ +PP +G
Sbjct: 148 LELEGKTVVVVCVENKLVGVIALADAPRPEAAAVIKHLKSMGLDVWLITGDNLRTASAIARQMGISHVKAVALPGEKAAQIKALQSQVNPLTLKPRIVCMVGDGINDAPALAQSDIGMAIGAGTQIAKAEADMVLVKSALTDVVVALDLARVVFSRIKLNFFFSIIYNAVGIPLAAGMFFPLIHRMMPPACAG 340
BLAST of EWM23455.1 vs. NCBI_GenBank
Match: gi|669165894|ref|XP_008618509.1| (hypothetical protein SDRG_14177 [Saprolegnia diclina VS20] >gi|530729842|gb|EQC28084.1| hypothetical protein SDRG_14177 [Saprolegnia diclina VS20]) HSP 1 Score: 196.823 bits (499), Expect = 1.397e-55 Identity = 108/240 (45.00%), Postives = 151/240 (62.92%), Query Frame = 0
Query: 54 RKALEAQGKTVVFVAAERRLQGLLAVSDKPRPDAARTVAALHRMGIQVWMLTGDSRAAAEAVAHSIGI--KHVQAGTLPGQKAKKIQALQARGHRVCMLGDGINDSPALAQADVGVAIGTGAQVACEAADLILLHNSLPDLVTALHLARTVFRRIQLNMLWALGYNLIGIPFAAGAFLPILGW--RLPPGYSGACSSLPARASRLPRLARDVMCWLT---LSTLPPPFGLSVSPLPPPLQ 286
R LE GKTV+++ + L+ +SD PRP+A +T+A LH +G+ V+M+TGD+R A VA IG+ HV A LP K K+Q LQA+G V M+GDGIND+PALAQAD+GVAIG G +A E A ++L+ + L D+VTAL L+RT++RRIQLN +WA+GYNL+ +P +AG + W +PP ++GA + + + L W T ++TLPPP V P LQ
Sbjct: 135 RLRLEEAGKTVIYMGICDSVVALIGISDAPRPEAKQTIAHLHALGLDVYMVTGDNRRTAHWVAAQIGLPSHHVMAEVLPANKTAKVQELQAQGRIVAMVGDGINDAPALAQADLGVAIGAGTDIAIETAQMVLMKSKLQDVVTALDLSRTIYRRIQLNFVWAMGYNLVLLPLSAGV---LYHWSVSIPPMFAGAAMAFSSVSVVTSSLLLK---WYTPPNMTTLPPPTPRKVDEKSPLLQ 368 The following BLAST results are available for this feature:
BLAST of EWM23455.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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