EWM23459.1, cds7214 (CDS) Nannochloropsis gaditana

Overview
NameEWM23459.1
Unique Namecds7214
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002471.1:71265..71320 -
Alignment locationCM002471.1:70561..70873 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM23459.1
ProductProtein of unknown function DUF3752
Orig transcript idgnl|cribi|Naga_101749g1.7796.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:71265..71320 -
CM002471.1supercontigCM002471.1:70561..70873 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR022226DUF3752
Homology
[Close]
BLAST of EWM23459.1 vs. NCBI_GenBank
Match: gi|585104510|gb|EWM23459.1| (Protein of unknown function DUF3752 [Nannochloropsis gaditana])

HSP 1 Score: 244.202 bits (622), Expect = 9.920e-82
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0 
Query:    1 MERLRRDAMTSQKHRGFTQRSERQRVTNPTAPKGPTSATEARLAQDEASAAAGRKTLLELHQEKLQAAQKKEKEKQRVEGIKRTPWSREAFMEGTKEMGARQASDLFTQAKELTGRFSRQYR 122
            MERLRRDAMTSQKHRGFTQRSERQRVTNPTAPKGPTSATEARLAQDEASAAAGRKTLLELHQEKLQAAQKKEKEKQRVEGIKRTPWSREAFMEGTKEMGARQASDLFTQAKELTGRFSRQYR
Sbjct:    1 MERLRRDAMTSQKHRGFTQRSERQRVTNPTAPKGPTSATEARLAQDEASAAAGRKTLLELHQEKLQAAQKKEKEKQRVEGIKRTPWSREAFMEGTKEMGARQASDLFTQAKELTGRFSRQYR 122
[Close]
BLAST of EWM23459.1 vs. NCBI_GenBank
Match: gi|553176593|ref|XP_005852384.1| (hypothetical protein NGA_0702700 [Nannochloropsis gaditana CCMP526] >gi|422299743|gb|EKU23501.1| hypothetical protein NGA_0702700 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 242.662 bits (618), Expect = 5.774e-81
Identity = 121/122 (99.18%), Postives = 122/122 (100.00%), Query Frame = 0 
Query:    1 MERLRRDAMTSQKHRGFTQRSERQRVTNPTAPKGPTSATEARLAQDEASAAAGRKTLLELHQEKLQAAQKKEKEKQRVEGIKRTPWSREAFMEGTKEMGARQASDLFTQAKELTGRFSRQYR 122
            MERLRRDAMTSQKHRGFTQRSERQRVTNPTAPKGPTSATEARLAQ+EASAAAGRKTLLELHQEKLQAAQKKEKEKQRVEGIKRTPWSREAFMEGTKEMGARQASDLFTQAKELTGRFSRQYR
Sbjct:   16 MERLRRDAMTSQKHRGFTQRSERQRVTNPTAPKGPTSATEARLAQEEASAAAGRKTLLELHQEKLQAAQKKEKEKQRVEGIKRTPWSREAFMEGTKEMGARQASDLFTQAKELTGRFSRQYR 137
The following BLAST results are available for this feature:
BLAST of EWM23459.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585104510|gb|EWM23459.1|9.920e-82100.00Protein of unknown function DUF3752 [Nannochlorops... [more]
gi|553176593|ref|XP_005852384.1|5.774e-8199.18hypothetical protein NGA_0702700 [Nannochloropsis ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7231rna7231Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications