EWM23461.1, cds7212 (CDS) Nannochloropsis gaditana

Overview
NameEWM23461.1
Unique Namecds7212
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002471.1:66141..66419 -
Alignment locationCM002471.1:65938..65976 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM23461.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101533g2.1554.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002471.1supercontigCM002471.1:66141..66419 -
CM002471.1supercontigCM002471.1:65938..65976 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM23461.1 vs. NCBI_GenBank
Match: gi|585104515|gb|EWM23461.1| (hypothetical protein Naga_101533g2 [Nannochloropsis gaditana])

HSP 1 Score: 209.149 bits (531), Expect = 2.020e-68
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0 
Query:    1 MKPEIFSSMEPPPSTPPRPATFSSSHFLCTEKTKQGKEKAEPSPSSSTSAGTLTLHLRRNHAVDASTLLGMLPFLFGPVLGPESCLAVAGTQKGKCRLCEGLLRS 105
            MKPEIFSSMEPPPSTPPRPATFSSSHFLCTEKTKQGKEKAEPSPSSSTSAGTLTLHLRRNHAVDASTLLGMLPFLFGPVLGPESCLAVAGTQKGKCRLCEGLLRS
Sbjct:    1 MKPEIFSSMEPPPSTPPRPATFSSSHFLCTEKTKQGKEKAEPSPSSSTSAGTLTLHLRRNHAVDASTLLGMLPFLFGPVLGPESCLAVAGTQKGKCRLCEGLLRS 105
The following BLAST results are available for this feature:
BLAST of EWM23461.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585104515|gb|EWM23461.1|2.020e-68100.00hypothetical protein Naga_101533g2 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7229rna7229Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications