EWM23477.1, cds7195 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23477.1 vs. NCBI_GenBank
Match: gi|585104545|gb|EWM23477.1| (Zn(2)-C6 fungal-type DNA-binding domain protein [Nannochloropsis gaditana]) HSP 1 Score: 1959.11 bits (5074), Expect = 0.000e+0 Identity = 949/949 (100.00%), Postives = 949/949 (100.00%), Query Frame = 0 Query: 1 MDTQKKYQDLGTSSKNKSCQKCYDSKSKCDFSLPCERCFRLNLPCRPRVRGSMTHSASKRTRGCSKSALGDEATGSPCWPPQESLPRLGGPGKAPRVGQEGRQWAGRDSYTSTEAASEDGEEDEGEGCQPEGSNAYRRDCAWGLLLERARYDFQRSMGTQPSGEESPIKAQPSRASASKEEENDGDGQSLLETILERVDRSRMAEEFLDAFHAVQRRGTVHREGMVGMLRHWKKLSDLSGQDLTLGVGAAIAKAFHVEQWELRYRRRNKVFNRSESSAGNVSLGSTPTSNSSQGQLSSKRFLTAVKEGPRGLLLEELMAVEAGAARLKASSLFRERDDGYTGLLLIEVDRTEDRVIVASNQAYLDVFLGPGFLLSEGLARGCLDPFLFAAFVAHSDRDTWFRMNLEALCSPRFRPEGGSSREGVPPRERLLYSEFLKIFSRDGHVRLYWARLAQLEATTREGEEEKLHFLLWMEPVPASRYITDRPEKATHSKTKLFKRRPHPKIGSSSLTVAADGEMMGERPLEQDVPEGQKGNGDSSGCGERQQVAQQKSGPPILLFPALASVPLPPGVTLPSFPSSWTISTDQARTGRQAAAFSPSCFPPLASPSPFTLHSSDSSPQPLASTLPHIFEIKSEFIRDLLRTAHKSVPAAKAHGKDTVTNSVIDAECKRVTNKQKVRRNKFLLSKISRSQEQNEVREIFRTTAGPKHLPPQHEQQQEEQKQEQPQKRQQQQQQQQPPPPGQPQEQQMPIFPFSKSSHCLPSGMSIGWEMEQQCQRHPLVFLHAHQKICSGGEHPPPFGQTNQEYDLNVGAFMLSPAAMSNDQQLNEHHVTQIRNHEAWYPASVGAKRRQYAEKQEHFRENFQYVDVNSQESNEEHRQPFLRRQFQHELEQGCSMSCWPPSTPWQRVQSRPTQQEEHRQPLSSIPHSKSRLGTGLFLLSMAAAQSNCDV 949 MDTQKKYQDLGTSSKNKSCQKCYDSKSKCDFSLPCERCFRLNLPCRPRVRGSMTHSASKRTRGCSKSALGDEATGSPCWPPQESLPRLGGPGKAPRVGQEGRQWAGRDSYTSTEAASEDGEEDEGEGCQPEGSNAYRRDCAWGLLLERARYDFQRSMGTQPSGEESPIKAQPSRASASKEEENDGDGQSLLETILERVDRSRMAEEFLDAFHAVQRRGTVHREGMVGMLRHWKKLSDLSGQDLTLGVGAAIAKAFHVEQWELRYRRRNKVFNRSESSAGNVSLGSTPTSNSSQGQLSSKRFLTAVKEGPRGLLLEELMAVEAGAARLKASSLFRERDDGYTGLLLIEVDRTEDRVIVASNQAYLDVFLGPGFLLSEGLARGCLDPFLFAAFVAHSDRDTWFRMNLEALCSPRFRPEGGSSREGVPPRERLLYSEFLKIFSRDGHVRLYWARLAQLEATTREGEEEKLHFLLWMEPVPASRYITDRPEKATHSKTKLFKRRPHPKIGSSSLTVAADGEMMGERPLEQDVPEGQKGNGDSSGCGERQQVAQQKSGPPILLFPALASVPLPPGVTLPSFPSSWTISTDQARTGRQAAAFSPSCFPPLASPSPFTLHSSDSSPQPLASTLPHIFEIKSEFIRDLLRTAHKSVPAAKAHGKDTVTNSVIDAECKRVTNKQKVRRNKFLLSKISRSQEQNEVREIFRTTAGPKHLPPQHEQQQEEQKQEQPQKRQQQQQQQQPPPPGQPQEQQMPIFPFSKSSHCLPSGMSIGWEMEQQCQRHPLVFLHAHQKICSGGEHPPPFGQTNQEYDLNVGAFMLSPAAMSNDQQLNEHHVTQIRNHEAWYPASVGAKRRQYAEKQEHFRENFQYVDVNSQESNEEHRQPFLRRQFQHELEQGCSMSCWPPSTPWQRVQSRPTQQEEHRQPLSSIPHSKSRLGTGLFLLSMAAAQSNCDV Sbjct: 1 MDTQKKYQDLGTSSKNKSCQKCYDSKSKCDFSLPCERCFRLNLPCRPRVRGSMTHSASKRTRGCSKSALGDEATGSPCWPPQESLPRLGGPGKAPRVGQEGRQWAGRDSYTSTEAASEDGEEDEGEGCQPEGSNAYRRDCAWGLLLERARYDFQRSMGTQPSGEESPIKAQPSRASASKEEENDGDGQSLLETILERVDRSRMAEEFLDAFHAVQRRGTVHREGMVGMLRHWKKLSDLSGQDLTLGVGAAIAKAFHVEQWELRYRRRNKVFNRSESSAGNVSLGSTPTSNSSQGQLSSKRFLTAVKEGPRGLLLEELMAVEAGAARLKASSLFRERDDGYTGLLLIEVDRTEDRVIVASNQAYLDVFLGPGFLLSEGLARGCLDPFLFAAFVAHSDRDTWFRMNLEALCSPRFRPEGGSSREGVPPRERLLYSEFLKIFSRDGHVRLYWARLAQLEATTREGEEEKLHFLLWMEPVPASRYITDRPEKATHSKTKLFKRRPHPKIGSSSLTVAADGEMMGERPLEQDVPEGQKGNGDSSGCGERQQVAQQKSGPPILLFPALASVPLPPGVTLPSFPSSWTISTDQARTGRQAAAFSPSCFPPLASPSPFTLHSSDSSPQPLASTLPHIFEIKSEFIRDLLRTAHKSVPAAKAHGKDTVTNSVIDAECKRVTNKQKVRRNKFLLSKISRSQEQNEVREIFRTTAGPKHLPPQHEQQQEEQKQEQPQKRQQQQQQQQPPPPGQPQEQQMPIFPFSKSSHCLPSGMSIGWEMEQQCQRHPLVFLHAHQKICSGGEHPPPFGQTNQEYDLNVGAFMLSPAAMSNDQQLNEHHVTQIRNHEAWYPASVGAKRRQYAEKQEHFRENFQYVDVNSQESNEEHRQPFLRRQFQHELEQGCSMSCWPPSTPWQRVQSRPTQQEEHRQPLSSIPHSKSRLGTGLFLLSMAAAQSNCDV 949
BLAST of EWM23477.1 vs. NCBI_GenBank
Match: gi|585100154|gb|EWM20491.1| (hypothetical protein Naga_100382g3 [Nannochloropsis gaditana]) HSP 1 Score: 877.085 bits (2265), Expect = 0.000e+0 Identity = 510/830 (61.45%), Postives = 596/830 (71.81%), Query Frame = 0 Query: 157 MGTQPSGEESPIKAQPSRASASKEEENDGDGQSLLETILERVDRSRMAEEFLDAFHAVQRRGTVHREGMVGMLRHWKKLSDLSGQDLTLGVGAAIAKAFHVEQWELRYRRRNKVFNRSESSAGNVSLGSTPTSNSSQGQLSSKRFLTAVKEGPRGLLLEE-LMAVEAGAARLKASSLFRERDDGYTGLLLIEVDRTEDRVIVASNQAYLDVFLGPGFLLSEGLARGCLDPFLFAAFVAHSDRDTWFRMNLEALCSPRFRPEGGSSREGVPPRERLLYSEFLKIFSRDGHVRLYWARLAQLEATTREGEEEKLHFLLWMEPVPASRYITDRPEKATHSKTKLFKRRPHPKIGSSS------LTVAADGEMMGERPLE-QDVPEG-QKGNGDSSGCGERQQVAQQKSGPPILLFPALASVPLPPGVTLPSFPSSWTISTDQARTGRQAAAFSPSCF--PPLA----SPS-PFTLHSSDSSPQPLASTLPHIFEIKSEFIRDLLRTAHKSVPAAKAHGKDTVTNSVIDAECKRVTNKQKVRRNKFLLSKISRSQEQNEVREIFRTTAGPKHLPPQHE--QQQEEQKQEQPQKRQQQQQQQQPPPPGQPQEQQMPIFPFSKSSHCLPSGMSIGWEMEQQCQRHPLVFLHAHQKICSGGEHPPPFGQTNQEYDLNVGAFMLSPAAMSNDQ-----------------------QLNEHHVTQIRNHEAWYPASVGAKRRQYAEKQEHFRENFQYVDVNSQESNEEHRQPFLRRQF-QHELEQGCSMSCWPPSTPWQRVQSRPTQQEEHRQPLSSIPHSKSRLGTGLFLLSMAAAQ 944 M TQ EE K Q S ASAS+EEE DG GQSLL TILERVDR RMAE+FLDAFHAVQRRG +HREGMVGMLRHWKKLSDL+G+DLTLG+GAAIA A VE WEL+YR + V RSES G+ SLG T NS QG+LSSKRF T V+EGP GLLLEE L AVEAGAARLKAS LFRERDDGYTGLLLIEVDRTEDRVIVASNQAYLDVFLGPGFLLSEGLARGCL+PFLFAAFVAHSDRDTWFRMNLEALCSPRFRPE G R+GVP RERLLYSEFLKIFSRDGHVRLYWARLAQLE + REGEEEK+HFLLWMEPVPASRYITDRPEK T SKT LF++RP + GS S +GE +G RPL+ QD E +KG+G SSGCGERQQVA QK PP L FPALASVPLPPG +LPS PSSWT++TDQ R G SPS F PP SPS P + + DS P++STLP +FEIKS+FI+ LL K+ A K+HG+ TVTN V+D +CK +T ++ R+ SKIS ++ + + + +F+ TA PKH P H+ QQQE Q Q+Q Q++QQ+QQ PG PQ+Q M +FP S+SS LPS + + EMEQQ QRHP +F H +Q C G + F QT+Q +DLNV A +L P AM N+Q + ++ H T I NHEA Y G +RR A++ E R +++ D++S+E ++H QP+L+RQ QHE E G S SCWPPSTPWQ QS+P QQ EH S IPHS +++GTGLFLLSMAAAQ Sbjct: 1 METQALEEELLTKGQTSGASASEEEEGDGKGQSLLGTILERVDRPRMAEQFLDAFHAVQRRGKIHREGMVGMLRHWKKLSDLAGEDLTLGIGAAIANALKVEAWELQYRGGDTV-KRSESWTGDSSLGIIHTPNSFQGRLSSKRFPTTVEEGPMGLLLEEELAAVEAGAARLKASPLFRERDDGYTGLLLIEVDRTEDRVIVASNQAYLDVFLGPGFLLSEGLARGCLEPFLFAAFVAHSDRDTWFRMNLEALCSPRFRPERGRRRDGVPRRERLLYSEFLKIFSRDGHVRLYWARLAQLEVSMREGEEEKMHFLLWMEPVPASRYITDRPEKTTQSKTTLFRQRPSAETGSLSREAREVCASVGEGEELGWRPLKLQDFSETEEKGDGASSGCGERQQVALQKRSPPSLFFPALASVPLPPGTSLPSLPSSWTVNTDQTRAGPPPGFLSPSGFPTPPFLFRSYSPSHPSSRYPLDSPAFPISSTLPDMFEIKSDFIKGLLPADPKTGLAGKSHGESTVTNPVVDVKCKHITKREMQRKK----SKISCARNEGKAQGVFQVTAEPKHSPKHHKEQQQQERQLQQQQQQQQQEQQNHHQQQPGLPQQQHMSVFPISRSSQYLPSSIDMKGEMEQQYQRHPSIFFHTYQDPCWGVKDHQVFRQTHQGHDLNVDASILPPVAMLNEQQLDKQQKQLILRLFSHAHREHHYKQHKQHTTYIENHEACYLPLDGRERRHNADENEDLRGAYRHWDIHSEEIYDDHLQPYLQRQLQQHEQEHGWSTSCWPPSTPWQGGQSQPIQQGEHGHSPSPIPHSTTKVGTGLFLLSMAAAQ 825
BLAST of EWM23477.1 vs. NCBI_GenBank
Match: gi|553187661|ref|XP_005854653.1| (hypothetical protein NGA_0196000, partial [Nannochloropsis gaditana CCMP526] >gi|422294410|gb|EKU21710.1| hypothetical protein NGA_0196000, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 484.567 bits (1246), Expect = 1.480e-162 Identity = 238/240 (99.17%), Postives = 238/240 (99.17%), Query Frame = 0 Query: 89 GGPGKAPRVGQEGRQWAGRDSYTSTEAASEDGEEDEGEGCQPEGSNAYRRDCAWGLLLERARYDFQRSMGTQPSGEESPIKAQPSRASASKEEENDGDGQSLLETILERVDRSRMAEEFLDAFHAVQRRGTVHREGMVGMLRHWKKLSDLSGQDLTLGVGAAIAKAFHVEQWELRYRRRNKVFNRSESSAGNVSLGSTPTSNSSQGQLSSKRFLTAVKEGPRGLLLEELMAVEAGAARLK 328 GGPGKAPRVGQEGRQWAGRDSYTSTEAASEDGEEDEGEGCQPEGSNAYRRDCAWGLLLERARYDFQRSMGTQPSGEESPIKAQPSRASASKEEENDGDGQSLLETILERVDRSRMAEEFLDAFHAVQRRGTVHR GMVGMLRHWKKLSDLSGQDLTLGVGAAIAKAFHVEQWELRYRRRNKV NRSESSAGNVSLGSTPTSNSSQGQLSSKRFLTAVKEGPRGLLLEELMAVEAGAARLK Sbjct: 6 GGPGKAPRVGQEGRQWAGRDSYTSTEAASEDGEEDEGEGCQPEGSNAYRRDCAWGLLLERARYDFQRSMGTQPSGEESPIKAQPSRASASKEEENDGDGQSLLETILERVDRSRMAEEFLDAFHAVQRRGTVHRGGMVGMLRHWKKLSDLSGQDLTLGVGAAIAKAFHVEQWELRYRRRNKVINRSESSAGNVSLGSTPTSNSSQGQLSSKRFLTAVKEGPRGLLLEELMAVEAGAARLK 245
BLAST of EWM23477.1 vs. NCBI_GenBank
Match: gi|553186124|ref|XP_005854365.1| (hypothetical protein NGA_0167300, partial [Nannochloropsis gaditana CCMP526] >gi|422294693|gb|EKU21993.1| hypothetical protein NGA_0167300, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 78.1814 bits (191), Expect = 1.440e-14 Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 0 Query: 1 MDTQKKYQDLGTSSKNKSCQKCYDSKSKCDFSLPCER 37 MDTQKKYQDLGTSSKNKSCQKCYDSKSKCDFSLPCER Sbjct: 1 MDTQKKYQDLGTSSKNKSCQKCYDSKSKCDFSLPCER 37
BLAST of EWM23477.1 vs. NCBI_GenBank
Match: gi|585100606|gb|EWM20744.1| (Zn(2)-C6 fungal-type DNA-binding domain protein [Nannochloropsis gaditana]) HSP 1 Score: 79.337 bits (194), Expect = 1.664e-11 Identity = 82/331 (24.77%), Postives = 132/331 (39.88%), Query Frame = 0 Query: 191 LETILERVDRSRMAEEFLDAFHAVQRRGTVHREGMVGMLRHWKKLSDLSGQDL--TLGVGAAIAKAFHVEQWELRYRRRNKVFNRSESSAGNVSLGSTPTSNSSQGQLSSKRFLTAVKEGPRGLLLEELMAVEAGAARLKASSLFRERDDGYTGLLLIEVDRTEDRVIVASNQAYLDVFLGPGFLLSEGLARGCLDPFLFAAFVAHSDRDTWFRMNLEALCSPRFRPEGGSSREGVPPRERLLYSEFLKIFSRDGHVRLYWARLAQLEATTREGEEEKLHFLLWMEPVPASRYITDRPEKATHSKTKLFKRRPHP-KIGSSSLTVAADGEM 518 L+ ++ER D M +L AF + + G ++R+ +G+L+ W L + D T G A + AF + EL L P ++ +G+L + R + E GA L+ + + R+ ++ + + +D + VI SN+A+ F P + + R CL FLFAA VA DR +F++ A S + + FLKIF R G + LY + + G E + EP P SR++T RP+ T HP S+S+ A G+M Sbjct: 173 LDLVIERSDLPAMVPLYLQAFQDLFQEGVLNRKRAIGLLKSWVDLGVMMDGDCDPTFGAFAEVKAAFQINDLELE---------------DPECLAYEPPLHAEKGRLWAARADRVLGE---------------GAKHLEENLVCRQANNSSRAVYMARMDCKDQWVI--SNKAHNTYFRSPAEFMQDMWKRRCLLAFLFAAGVAPEDRLAYFKLLHFATLSTSL----------------MKRTAFLKIFDRQGRMTLYLSD----HQVVKMGPNEYASLCV-TEPAPPSRHVTTRPDVTRLRSTH------HPCNSSSASMFRVASGDM 444 The following BLAST results are available for this feature:
BLAST of EWM23477.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 5
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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