EWM29946.1, cds719 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29946.1 vs. NCBI_GenBank
Match: gi|585112534|gb|EWM29946.1| (formin 2 domain containing protein [Nannochloropsis gaditana]) HSP 1 Score: 721.079 bits (1860), Expect = 0.000e+0 Identity = 347/347 (100.00%), Postives = 347/347 (100.00%), Query Frame = 0 Query: 1 MGPPTPESVALLKDRFPNRYMVWNLSNEASHRIAPALQGQLCDFHWSAPGKSQNPALHSLFGLCYAIHAWLSLAPTHAAFVFCGNGKTRTGIVVACLLRYCAQVPTALEGFKLFCHKRCKALFEDVKSKIPPTMVNFFSHFDEAYDLGEFPNRHPLRLLSVRIDGVPVEDLPCIDVWNADSVKVYSSLTAPAASKSWEEETGLYREVEARLLGDFVLIGRFGGKYGHDEHDASKILFRYVGHTAFLTEGVVELRKDAFDIMQRYKQNFEEDSFAMELEFERLGPGLSAGLDDSATTLRLWEALPEKVTGWTPTGCKASFPGHNPPPPPARGEERREQEGRTYRPRRC 347 MGPPTPESVALLKDRFPNRYMVWNLSNEASHRIAPALQGQLCDFHWSAPGKSQNPALHSLFGLCYAIHAWLSLAPTHAAFVFCGNGKTRTGIVVACLLRYCAQVPTALEGFKLFCHKRCKALFEDVKSKIPPTMVNFFSHFDEAYDLGEFPNRHPLRLLSVRIDGVPVEDLPCIDVWNADSVKVYSSLTAPAASKSWEEETGLYREVEARLLGDFVLIGRFGGKYGHDEHDASKILFRYVGHTAFLTEGVVELRKDAFDIMQRYKQNFEEDSFAMELEFERLGPGLSAGLDDSATTLRLWEALPEKVTGWTPTGCKASFPGHNPPPPPARGEERREQEGRTYRPRRC Sbjct: 1 MGPPTPESVALLKDRFPNRYMVWNLSNEASHRIAPALQGQLCDFHWSAPGKSQNPALHSLFGLCYAIHAWLSLAPTHAAFVFCGNGKTRTGIVVACLLRYCAQVPTALEGFKLFCHKRCKALFEDVKSKIPPTMVNFFSHFDEAYDLGEFPNRHPLRLLSVRIDGVPVEDLPCIDVWNADSVKVYSSLTAPAASKSWEEETGLYREVEARLLGDFVLIGRFGGKYGHDEHDASKILFRYVGHTAFLTEGVVELRKDAFDIMQRYKQNFEEDSFAMELEFERLGPGLSAGLDDSATTLRLWEALPEKVTGWTPTGCKASFPGHNPPPPPARGEERREQEGRTYRPRRC 347
BLAST of EWM29946.1 vs. NCBI_GenBank
Match: gi|553176187|ref|XP_005852360.1| (formin like protein [Nannochloropsis gaditana CCMP526] >gi|422296168|gb|EKU23467.1| formin like protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 356.295 bits (913), Expect = 2.531e-121 Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0 Query: 134 MVNFFSHFDEAYDLGEFPNRHPLRLLSVRIDGVPVEDLPCIDVWNADSVKVYSSLTAPAASKSWEEETGLYREVEARLLGDFVLIGRFGGKYGHDEHDASKILFRYVGHTAFLTEGVVELRKDAFDIMQRYKQNFEEDSFAMELEFERLGPGLSAGLDDSATTLRLWEALPEKV 307 MVNFFSHFDEAYDLGEFPNRHPLRLLSVRIDGVPVEDLPCIDVWNADSVKVYSSLTAPAASKSWEEETGLYREVEARLLGDFVLIGRFGGKYGHDEHDASKILFRYVGHTAFLTEGVVELRKDAFDIMQRYKQNFEEDSFAMELEFERLGPGLSAGLDDSATTLRLWEALPEKV Sbjct: 1 MVNFFSHFDEAYDLGEFPNRHPLRLLSVRIDGVPVEDLPCIDVWNADSVKVYSSLTAPAASKSWEEETGLYREVEARLLGDFVLIGRFGGKYGHDEHDASKILFRYVGHTAFLTEGVVELRKDAFDIMQRYKQNFEEDSFAMELEFERLGPGLSAGLDDSATTLRLWEALPEKV 174
BLAST of EWM29946.1 vs. NCBI_GenBank
Match: gi|224007299|ref|XP_002292609.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220971471|gb|EED89805.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 193.356 bits (490), Expect = 3.694e-51 Identity = 104/253 (41.11%), Postives = 150/253 (59.29%), Query Frame = 0 Query: 52 SQNPALHSLFGLCYAIHAWLSLAP---THAAFVFCGNGKTRTGIVVACLLRYCAQVPTALEGFKLFCHKR----------------CKALFEDVKSKIPPTMVNFFSHFDEAYDLGEFPNRHPLRLLSVRIDGVPVEDLPCIDVW-NADSVK--VYSSLTAPAASKSWEEETGLYREVEARLLGDFVLIGRFGGKYGHDEHDASKILFRYVGHTAFLTEGVVELRKDAFDIMQRYKQNFEEDSFAMELEFERL 282 SQ PA+ + +CYAIHA+LS+A + A V+C NGKTRTG+VVAC LR+ QV ++ GF+LFC +R + D+ IPP++ FF +FDE L +P+ PL L SVR+ GVPV+D+PC+D+W + D V+ VYSS + ++ W++E G Y + L DF L+ RFGGK+ D D +K+LFRYV + FL + L + D+M+RY +F+ED F M +FE + Sbjct: 980 SQTPAVSRVLEICYAIHAYLSIASNSTSAVACVYCSNGKTRTGVVVACYLRFTNQVSKSMIGFELFCERRGIIPGLSSSKNANNTSMSSENVDMAGHIPPSLRQFFHNFDEVLMLNRYPHPEPLLLQSVRLQGVPVDDMPCVDIWEHGDVVRHLVYSSHDDTSLNE-WDDEEGSY-SIGQILKRDFTLVCRFGGKFASDSDDPTKVLFRYVNSSKFLRGERIVLNMGSVDMMRRYADSFDEDDFVMTFDFESV 1230
BLAST of EWM29946.1 vs. NCBI_GenBank
Match: gi|1210524154|dbj|GAX16883.1| (hypothetical protein FisN_5Hh256 [Fistulifera solaris]) HSP 1 Score: 179.489 bits (454), Expect = 9.049e-48 Identity = 111/310 (35.81%), Postives = 158/310 (50.97%), Query Frame = 0 Query: 5 TPESVA--LLKDRFPNRYMVWNL-SNEASHRIAPALQGQLCDFHW--SAPGKSQNPALHSLFGLCYAIHAWLSLA--------------PTHAAFVFCGNGKTRTGIVVACLLRYCAQVPTALEGFKLFCHKRC---KALFEDVKSKIPPTMVNFFSHFDEAYDLGEFPNRHPLRLLSVRIDGVPVEDLPCIDVWNADSVKVYSS---------LTAPAASK---SWEEETGLYREVEARLLGDFVLIGRFGGKYGHDEHDASKILFRYVGHTAFLTEGVVELRKDAFDIMQRYKQNFEEDSFAMELEFE 280 TP S+A L K Y++++L ++A L+ Q+ W S S+ P + L +CYA HAWL++ P H A ++C NGKTRT I +AC L++ QV +GF LF KRC + V +P ++ FF +FD +L + N+ PL L S+ + G+PVE+ PC++++NA VYSS +T P A + WEEE G + V L GDF L+ RFGG Y D D SKI+FRY T FL G ++LR D D+M+RY + F + FE Sbjct: 144 TPHSLAKFLNKKHGEGNYLLFSLCDDQADDSTLFHLRRQIVQLPWKLSRDNASELPTVPLLLNICYAFHAWLNMEDISNGNVGHSSLKRPQHVAVIYCPNGKTRTAIAIACYLKFTGQVDKTEDGFLLFLEKRCPDSELSPATVAKALPASIRTFFRNFDSTIELKRYMNQQPLLLRSIVMRGLPVEEKPCLNIFNAQGDHVYSSHPDLFGDISVTNPYAQQDRSQWEEEEGFF-PVNQILDGDFYLLCRFGGHYAGDLSDPSKIIFRYANTTGFLGAGPIDLRCDRVDLMRRYAHLIDCKEFLFTMSFE 452
BLAST of EWM29946.1 vs. NCBI_GenBank
Match: gi|970658094|gb|KUF95900.1| (hypothetical protein AM588_10008425 [Phytophthora nicotianae]) HSP 1 Score: 161.384 bits (407), Expect = 1.097e-42 Identity = 99/280 (35.36%), Postives = 147/280 (52.50%), Query Frame = 0 Query: 20 YMVWNL-------SNEASHRIAPALQGQLCDFHWSAPG-KSQNPALHSLFGLCYAIHAWLSLAPTHAAFVFCGNGKTRTGIVVACLLRYCAQVPTALEGFKLFCHKR--CKALF-EDVKSKIPPTMVNFFSHFDEAYDLGEFPNRHPLRLLSVRIDGVPVEDLPCIDVWN-------ADSVKVYSSLTAPAASKSWEEETGLYR---EVEARLLGDFVLIGRFGGKYGHDEHDA-SKILFRYVGHTAFLTEGVVELRKDAFDIMQRYKQNFEEDSFAMEL 277 +M++NL +++ +A L QL +F+W G K+ P L +F +CYA+ AWLSL P H A V C GKTR+G+VVAC L + + F F KR K+L +K K PP++ F + F E + PN PL L +V +PVE PC+ +W+ D +++ + AP W EE G + E L G F ++ FG Y D+ DA S++LFRY T FL G+V L+K D+M++Y+ F+ED F+++L Sbjct: 77 FMLFNLNALEDAAADDGRQSVADKLHEQLLEFNWERDGMKAHTPPLDLIFRICYALDAWLSLDPQHVALVNCQTGKTRSGVVVACYLLFARLADDPTDAFVEFYRKRWDMKSLTPHALKKKTPPSIQRFLTGFHELLAQQKPPNAKPLLLKAVIFRQLPVELQPCVQIWDDYKLVFCTDELQIGENGEAPVL--DWNEEDGFFAILWENGIELDGGFSILCSFGEDYDADDVDASSRVLFRYADSTLFLVPGLVTLKKHDLDLMKQYEHGFDEDQFSVDL 354
BLAST of EWM29946.1 vs. NCBI_GenBank
Match: gi|1210527213|dbj|GAX13848.1| (hypothetical protein FisN_5Lh256 [Fistulifera solaris]) HSP 1 Score: 155.221 bits (391), Expect = 1.745e-41 Identity = 85/219 (38.81%), Postives = 119/219 (54.34%), Query Frame = 0 Query: 77 HAAFVFCGNGKTRTGIVVACLLRYCAQVPTALEGFKLFCHKRC---KALFEDVKSKIPPTMVNFFSHFDEAYDLGEFPNRHPLRLLSVRIDGVPVEDLPCIDVWNADSVKVYSS---------LTAPAASKS---WEEETGLYREVEARLLGDFVLIGRFGGKYGHDEHDASKILFRYVGHTAFLTEGVVELRKDAFDIMQRYKQNFEEDSFAMELEFE 280 H ++C NGKTRT I +AC L++ QV +GF LF +RC + V +P ++ FF +FD L + N+ PL L S+ + G+PVE+ PC++++NA VYSS +T P A + WEEE G + V L GDF L+ RFGG Y D D SKI+FRY T+FL G + LR D D+M+RY + F + + FE Sbjct: 19 HVGVIYCPNGKTRTAIAIACYLKFTGQVDKTEDGFLLFLEQRCPDSELSPATVAKALPASIRTFFRNFDSTIKLKRYMNQQPLLLRSIVMRGLPVEEKPCLNIFNAQGDHVYSSHPDLFGDISVTNPYAQQDPGHWEEEEGFF-PVNQILEGDFYLLCRFGGHYADDLSDPSKIIFRYANTTSFLGAGPIHLRCDRVDLMRRYAHLIDYKEFLLSMTFE 236
BLAST of EWM29946.1 vs. NCBI_GenBank
Match: gi|970663927|gb|KUG00975.1| (Formin-y 2 domain-containing protein [Phytophthora nicotianae]) HSP 1 Score: 164.081 bits (414), Expect = 4.145e-41 Identity = 99/280 (35.36%), Postives = 147/280 (52.50%), Query Frame = 0 Query: 20 YMVWNL-------SNEASHRIAPALQGQLCDFHWSAPG-KSQNPALHSLFGLCYAIHAWLSLAPTHAAFVFCGNGKTRTGIVVACLLRYCAQVPTALEGFKLFCHKR--CKALF-EDVKSKIPPTMVNFFSHFDEAYDLGEFPNRHPLRLLSVRIDGVPVEDLPCIDVWN-------ADSVKVYSSLTAPAASKSWEEETGLYR---EVEARLLGDFVLIGRFGGKYGHDEHDA-SKILFRYVGHTAFLTEGVVELRKDAFDIMQRYKQNFEEDSFAMEL 277 +M++NL +++ +A L QL +F+W G K+ P L +F +CYA+ AWLSL P H A V C GKTR+G+VVAC L + + F F KR K+L +K K PP++ F + F E + PN PL L +V +PVE PC+ +W+ D +++ + AP W EE G + E L G F ++ FG Y D+ DA S++LFRY T FL G+V L+K D+M++Y+ F+ED F+++L Sbjct: 77 FMLFNLNALEDAAADDGRQSVADKLHEQLLEFNWERDGMKAHTPPLDLIFRICYALDAWLSLDPQHVALVNCQTGKTRSGVVVACYLLFARLADDPTDAFVEFYRKRWDMKSLTPHALKKKTPPSIQRFLTGFHELLAQQKPPNAKPLLLKAVIFRQLPVELQPCVQIWDDYKLVFCTDELQIGENGEAPVL--DWNEEDGFFAILWENGIELDGGFSILCSFGEDYDADDVDASSRVLFRYADSTLFLVPGLVTLKKHDLDLMKQYEHGFDEDQFSVDL 354
BLAST of EWM29946.1 vs. NCBI_GenBank
Match: gi|567955377|gb|ETK81010.1| (hypothetical protein, variant [Phytophthora parasitica] >gi|567984058|gb|ETL34435.1| hypothetical protein, variant [Phytophthora parasitica] >gi|570945439|gb|ETP10696.1| hypothetical protein, variant [Phytophthora parasitica CJ01A1]) HSP 1 Score: 160.614 bits (405), Expect = 6.329e-40 Identity = 99/281 (35.23%), Postives = 148/281 (52.67%), Query Frame = 0 Query: 20 YMVWNL-------SNEASHRIAPALQGQLCDFHWSAPG-KSQNPALHSLFGLCYAIHAWLSLAPTHAAFVFCGNGKTRTGIVVACLLRYCAQVPTALEGFKLFCHKR--CKALF-EDVKSKIPPTMVNFFSHFDEAYDLGEFPNRHPLRLLSVRIDGVPVEDLPCIDVWN-------ADSVKVYSSLTAPAASKSWEEETGLYR---EVEARLLGDFVLIGRFGGKYGH-DEHDA-SKILFRYVGHTAFLTEGVVELRKDAFDIMQRYKQNFEEDSFAMEL 277 +M++NL +++ +A L QL +F+W G K+ P L +F +CYA+ AWLSL P H A V C GKTR+G+VVAC L + + F F KR K+L +K K PP++ F + F E + PN PL L +V +PVE PC+ +W+ D +++ + AP W EE G + E L G F ++ FG Y + D+ DA S++LFRY T FL G+V L+K D+M++Y+ F+ED F+++L Sbjct: 77 FMLFNLNALEDAAADDGRQSVADKLHEQLLEFNWERDGMKAHTPPLDLIFRICYALDAWLSLDPQHVALVNCQTGKTRSGVVVACYLLFARLADDPTDAFVEFYRKRWDMKSLTPHALKKKTPPSIQRFLTGFHELLAQQKPPNAKPLLLKAVIFRQLPVELQPCVQIWDDYKLVFCTDELQIGENGEAPVL--DWNEEDGFFAILWENGIELDGGFSILCSFGEDYDNADDVDASSRVLFRYADSTLFLVPGLVTLKKHDLDLMKQYEHGFDEDQFSVDL 355
BLAST of EWM29946.1 vs. NCBI_GenBank
Match: gi|566018011|gb|ETI40922.1| (hypothetical protein, variant [Phytophthora parasitica P1569]) HSP 1 Score: 160.614 bits (405), Expect = 6.513e-40 Identity = 99/281 (35.23%), Postives = 148/281 (52.67%), Query Frame = 0 Query: 20 YMVWNL-------SNEASHRIAPALQGQLCDFHWSAPG-KSQNPALHSLFGLCYAIHAWLSLAPTHAAFVFCGNGKTRTGIVVACLLRYCAQVPTALEGFKLFCHKR--CKALF-EDVKSKIPPTMVNFFSHFDEAYDLGEFPNRHPLRLLSVRIDGVPVEDLPCIDVWN-------ADSVKVYSSLTAPAASKSWEEETGLYR---EVEARLLGDFVLIGRFGGKYGH-DEHDA-SKILFRYVGHTAFLTEGVVELRKDAFDIMQRYKQNFEEDSFAMEL 277 +M++NL +++ +A L QL +F+W G K+ P L +F +CYA+ AWLSL P H A V C GKTR+G+VVAC L + + F F KR K+L +K K PP++ F + F E + PN PL L +V +PVE PC+ +W+ D +++ + AP W EE G + E L G F ++ FG Y + D+ DA S++LFRY T FL G+V L+K D+M++Y+ F+ED F+++L Sbjct: 77 FMLFNLNALEDAAADDGRQSVADKLHEQLLEFNWERDGMKAHTPPLDLIFRICYALDAWLSLDPQHVALVNCQTGKTRSGVVVACYLLFARLADDPTDAFVEFYRKRWDMKSLTPHALKKKTPPSIQRFLTGFHELLAQQKPPNAKPLLLKAVIFRQLPVELQPCVQIWDDYKLVFCTDELQIGENGEAPVL--DWNEEDGFFAILWENGIELDGGFSILCSFGEDYDNADDVDASSRVLFRYADSTLFLVPGLVTLKKHDLDLMKQYEHGFDEDQFSVDL 355
BLAST of EWM29946.1 vs. NCBI_GenBank
Match: gi|568043658|gb|ETM40934.1| (hypothetical protein, variant [Phytophthora parasitica]) HSP 1 Score: 160.614 bits (405), Expect = 6.766e-40 Identity = 99/281 (35.23%), Postives = 148/281 (52.67%), Query Frame = 0 Query: 20 YMVWNL-------SNEASHRIAPALQGQLCDFHWSAPG-KSQNPALHSLFGLCYAIHAWLSLAPTHAAFVFCGNGKTRTGIVVACLLRYCAQVPTALEGFKLFCHKR--CKALF-EDVKSKIPPTMVNFFSHFDEAYDLGEFPNRHPLRLLSVRIDGVPVEDLPCIDVWN-------ADSVKVYSSLTAPAASKSWEEETGLYR---EVEARLLGDFVLIGRFGGKYGH-DEHDA-SKILFRYVGHTAFLTEGVVELRKDAFDIMQRYKQNFEEDSFAMEL 277 +M++NL +++ +A L QL +F+W G K+ P L +F +CYA+ AWLSL P H A V C GKTR+G+VVAC L + + F F KR K+L +K K PP++ F + F E + PN PL L +V +PVE PC+ +W+ D +++ + AP W EE G + E L G F ++ FG Y + D+ DA S++LFRY T FL G+V L+K D+M++Y+ F+ED F+++L Sbjct: 77 FMLFNLNALEDAAADDGRQSVADKLHEQLLEFNWERDGMKAHTPPLDLIFRICYALDAWLSLDPQHVALVNCQTGKTRSGVVVACYLLFARLADDPTDAFVEFYRKRWDMKSLTPHALKKKTPPSIQRFLTGFHELLAQQKPPNAKPLLLKAVIFRQLPVELQPCVQIWDDYKLVFCTDELQIGENGEAPVL--DWNEEDGFFAILWENGIELDGGFSILCSFGEDYDNADDVDASSRVLFRYADSTLFLVPGLVTLKKHDLDLMKQYEHGFDEDQFSVDL 355 The following BLAST results are available for this feature:
BLAST of EWM29946.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|