EWM23491.1, cds7181 (CDS) Nannochloropsis gaditana

Overview
NameEWM23491.1
Unique Namecds7181
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002470.1:692414..692810 -
Alignment locationCM002470.1:692127..692188 -
Alignment locationCM002470.1:691911..692049 -
Alignment locationCM002470.1:691676..691768 -
Alignment locationCM002470.1:691378..691500 -
Alignment locationCM002470.1:691085..691166 -
Alignment locationCM002470.1:690717..690787 -
Alignment locationCM002470.1:690426..690614 -
Alignment locationCM002470.1:690152..690255 -
Alignment locationCM002470.1:689856..689948 -
Alignment locationCM002470.1:689492..689681 -
Alignment locationCM002470.1:689314..689382 -
Alignment locationCM002470.1:689106..689269 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM23491.1
Productpropionyl- carboxylase
Orig transcript idgnl|cribi|Naga_100198g5.5733.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:692414..692810 -
CM002470.1supercontigCM002470.1:692127..692188 -
CM002470.1supercontigCM002470.1:691911..692049 -
CM002470.1supercontigCM002470.1:691676..691768 -
CM002470.1supercontigCM002470.1:691378..691500 -
CM002470.1supercontigCM002470.1:691085..691166 -
CM002470.1supercontigCM002470.1:690717..690787 -
CM002470.1supercontigCM002470.1:690426..690614 -
CM002470.1supercontigCM002470.1:690152..690255 -
CM002470.1supercontigCM002470.1:689856..689948 -
CM002470.1supercontigCM002470.1:689492..689681 -
CM002470.1supercontigCM002470.1:689314..689382 -
CM002470.1supercontigCM002470.1:689106..689269 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016874ligase activity
Vocabulary: INTERPRO
TermDefinition
IPR011763COA_CT_C
IPR011762COA_CT_N
IPR029045ClpP/crotonase-like_dom
IPR000022Carboxyl_trans
Homology
BLAST of EWM23491.1 vs. NCBI_GenBank
Match: gi|585104561|gb|EWM23491.1| (propionyl- carboxylase [Nannochloropsis gaditana])

HSP 1 Score: 1208.74 bits (3126), Expect = 0.000e+0
Identity = 591/591 (100.00%), Postives = 591/591 (100.00%), Query Frame = 0
Query:    1 MLLLLPLGLLPCPYGSGRALVRRLSSQQGRNGRAGRPPRRHLGRSKRRPCLLVCICEHDSLGSGPHTPVFLGQVYQGGGELARSKHEQRGKLYVRERIERLVDPGTPFLELSPLAGRELYDQDKVPAGGIVTGIGRVAGLECMLVANDATVKGGTYYPITVKKHLRAQEIASQNKLPCIYLVDSGGAFLPRQDEVFPDRDHFGRIFFNQANMSAAGIPQIAVVMGSCTAGGAYVPAMSDESVIVKGSGTIFLGGPPLVKAATGEVVSAEDLGGADVHCRTSGVVDHYATDDLHALEITRSIVASLNVPEARTAAFSPNGKTGGPYEEPLYSPDELGGLVPLDPKRPFDVRSVIARVVDGSRFQEFKAFYGPTIVTGFARIHGILTGIVANNGILFSESALKAAHFIELCSQRHIPLVFLQNITGFMVGRKYENEGIAKNGAKLVTAVSTSKVPKITLLIAGSYGAGNYGMCGRAFSPRFLFMWPNAKISVMGGEQAANVLATVAAQGKDWTSVEESAFKAPILAKFSKESSCYYSSARAGLGAGGGSEGAGRKDAIWSLQDVIKHQRIVRKVLDASEKVYKCPMRVNRSLY 591
            MLLLLPLGLLPCPYGSGRALVRRLSSQQGRNGRAGRPPRRHLGRSKRRPCLLVCICEHDSLGSGPHTPVFLGQVYQGGGELARSKHEQRGKLYVRERIERLVDPGTPFLELSPLAGRELYDQDKVPAGGIVTGIGRVAGLECMLVANDATVKGGTYYPITVKKHLRAQEIASQNKLPCIYLVDSGGAFLPRQDEVFPDRDHFGRIFFNQANMSAAGIPQIAVVMGSCTAGGAYVPAMSDESVIVKGSGTIFLGGPPLVKAATGEVVSAEDLGGADVHCRTSGVVDHYATDDLHALEITRSIVASLNVPEARTAAFSPNGKTGGPYEEPLYSPDELGGLVPLDPKRPFDVRSVIARVVDGSRFQEFKAFYGPTIVTGFARIHGILTGIVANNGILFSESALKAAHFIELCSQRHIPLVFLQNITGFMVGRKYENEGIAKNGAKLVTAVSTSKVPKITLLIAGSYGAGNYGMCGRAFSPRFLFMWPNAKISVMGGEQAANVLATVAAQGKDWTSVEESAFKAPILAKFSKESSCYYSSARAGLGAGGGSEGAGRKDAIWSLQDVIKHQRIVRKVLDASEKVYKCPMRVNRSLY
Sbjct:    1 MLLLLPLGLLPCPYGSGRALVRRLSSQQGRNGRAGRPPRRHLGRSKRRPCLLVCICEHDSLGSGPHTPVFLGQVYQGGGELARSKHEQRGKLYVRERIERLVDPGTPFLELSPLAGRELYDQDKVPAGGIVTGIGRVAGLECMLVANDATVKGGTYYPITVKKHLRAQEIASQNKLPCIYLVDSGGAFLPRQDEVFPDRDHFGRIFFNQANMSAAGIPQIAVVMGSCTAGGAYVPAMSDESVIVKGSGTIFLGGPPLVKAATGEVVSAEDLGGADVHCRTSGVVDHYATDDLHALEITRSIVASLNVPEARTAAFSPNGKTGGPYEEPLYSPDELGGLVPLDPKRPFDVRSVIARVVDGSRFQEFKAFYGPTIVTGFARIHGILTGIVANNGILFSESALKAAHFIELCSQRHIPLVFLQNITGFMVGRKYENEGIAKNGAKLVTAVSTSKVPKITLLIAGSYGAGNYGMCGRAFSPRFLFMWPNAKISVMGGEQAANVLATVAAQGKDWTSVEESAFKAPILAKFSKESSCYYSSARAGLGAGGGSEGAGRKDAIWSLQDVIKHQRIVRKVLDASEKVYKCPMRVNRSLY 591          
BLAST of EWM23491.1 vs. NCBI_GenBank
Match: gi|675183887|ref|XP_008900828.1| (methylcrotonoyl-CoA carboxylase beta chain, mitochondrial [Phytophthora parasitica INRA-310] >gi|566030516|gb|ETI53427.1| methylcrotonoyl-CoA carboxylase beta chain, mitochondrial [Phytophthora parasitica P1569] >gi|568025818|gb|ETL99820.1| methylcrotonoyl-CoA carboxylase beta chain, mitochondrial [Phytophthora parasitica] >gi|568099035|gb|ETN13753.1| methylcrotonoyl-CoA carboxylase beta chain, mitochondrial [Phytophthora parasitica INRA-310] >gi|570334204|gb|ETO82152.1| methylcrotonoyl-CoA carboxylase beta chain, mitochondrial [Phytophthora parasitica P1976] >gi|570958236|gb|ETP23215.1| methylcrotonoyl-CoA carboxylase beta chain, mitochondrial [Phytophthora parasitica CJ01A1] >gi|570994013|gb|ETP51227.1| methylcrotonoyl-CoA carboxylase beta chain, mitochondrial [Phytophthora parasitica P10297] >gi|970655243|gb|KUF93432.1| Methylcrotonoyl-CoA carboxylase beta chain [Phytophthora nicotianae])

HSP 1 Score: 704.516 bits (1817), Expect = 0.000e+0
Identity = 339/473 (71.67%), Postives = 398/473 (84.14%), Query Frame = 0
Query:   71 LGQVYQGGGELARSKHEQRGKLYVRERIERLVDPGTPFLELSPLAGRELYDQDKVPAGGIVTGIGRVAGLECMLVANDATVKGGTYYPITVKKHLRAQEIASQNKLPCIYLVDSGGAFLPRQDEVFPDRDHFGRIFFNQANMSAAGIPQIAVVMGSCTAGGAYVPAMSDESVIVKGSGTIFLGGPPLVKAATGEVVSAEDLGGADVHCRTSGVVDHYATDDLHALEITRSIVASLNVPEARTAAFSPNGKTGGPYEEPLYSPDELGGLVPLDPKRPFDVRSVIARVVDGSRFQEFKAFYGPTIVTGFARIHGILTGIVANNGILFSESALKAAHFIELCSQRHIPLVFLQNITGFMVGRKYENEGIAKNGAKLVTAVSTSKVPKITLLIAGSYGAGNYGMCGRAFSPRFLFMWPNAKISVMGGEQAANVLATVAAQG-----KDWTSVEESAFKAPILAKFSKESSCYYSSAR 538
            + +  QGGGE AR +HE RGK+ VR+RI+ L+DPG+PFLELSPLA  ++Y  D VP+ GIVTGIGR+ G+ECM++ NDATVKGGTY+P+TVKKHLRAQEIA +N+LPC+YLVDSGGAFLP Q ++FPDRDHFGR F+NQA MSA GIPQIAVVMGSCTAGGAYVPAMSDESVIVKG+GT+FLGGPPLVKAATGEV++ E+LGGADVHCRTSGV DHYA +D HAL+ITR IV++LN  +           T  P EEP+YSPDELGG++P+D ++PFDVR VIAR+VDGSRF EFK  YGPTIVTGFAR++G   GIVANNGILFSES++KAAHFIELCSQR IPL+FLQNITGFMVG+K E+ GIAK+GAK+V AVS +KVPKIT +I GSYGAGNYGMCGRAFSPRFL+MWPNA+ISVMGGEQAA VLA V         + W++ EE+AFK PIL K+ KESS YYS+AR
Sbjct:   65 VAKARQGGGESARKRHESRGKMPVRDRIDSLLDPGSPFLELSPLAAYDMYGGD-VPSAGIVTGIGRINGVECMILGNDATVKGGTYFPLTVKKHLRAQEIAQENRLPCVYLVDSGGAFLPLQADIFPDRDHFGREFYNQATMSAMGIPQIAVVMGSCTAGGAYVPAMSDESVIVKGNGTVFLGGPPLVKAATGEVITPEELGGADVHCRTSGVTDHYANNDAHALDITRRIVSNLNYRKEPAV-------TQTPIEEPIYSPDELGGVIPVDSRKPFDVRKVIARIVDGSRFDEFKKEYGPTIVTGFARLYGNPVGIVANNGILFSESSVKAAHFIELCSQRGIPLLFLQNITGFMVGKKAEHGGIAKDGAKMVMAVSNAKVPKITCIIGGSYGAGNYGMCGRAFSPRFLYMWPNARISVMGGEQAAGVLAQVQRDNYERRKETWSAEEEAAFKQPILDKYEKESSAYYSTAR 529          
BLAST of EWM23491.1 vs. NCBI_GenBank
Match: gi|568056266|gb|ETM52978.1| (methylcrotonoyl-CoA carboxylase beta chain, mitochondrial [Phytophthora parasitica])

HSP 1 Score: 704.131 bits (1816), Expect = 0.000e+0
Identity = 339/473 (71.67%), Postives = 398/473 (84.14%), Query Frame = 0
Query:   71 LGQVYQGGGELARSKHEQRGKLYVRERIERLVDPGTPFLELSPLAGRELYDQDKVPAGGIVTGIGRVAGLECMLVANDATVKGGTYYPITVKKHLRAQEIASQNKLPCIYLVDSGGAFLPRQDEVFPDRDHFGRIFFNQANMSAAGIPQIAVVMGSCTAGGAYVPAMSDESVIVKGSGTIFLGGPPLVKAATGEVVSAEDLGGADVHCRTSGVVDHYATDDLHALEITRSIVASLNVPEARTAAFSPNGKTGGPYEEPLYSPDELGGLVPLDPKRPFDVRSVIARVVDGSRFQEFKAFYGPTIVTGFARIHGILTGIVANNGILFSESALKAAHFIELCSQRHIPLVFLQNITGFMVGRKYENEGIAKNGAKLVTAVSTSKVPKITLLIAGSYGAGNYGMCGRAFSPRFLFMWPNAKISVMGGEQAANVLATVAAQG-----KDWTSVEESAFKAPILAKFSKESSCYYSSAR 538
            + +  QGGGE AR +HE RGK+ VR+RI+ L+DPG+PFLELSPLA  ++Y  D VP+ GIVTGIGR+ G+ECM++ NDATVKGGTY+P+TVKKHLRAQEIA +N+LPC+YLVDSGGAFLP Q ++FPDRDHFGR F+NQA MSA GIPQIAVVMGSCTAGGAYVPAMSDESVIVKG+GT+FLGGPPLVKAATGEV++ E+LGGADVHCRTSGV DHYA +D HAL+ITR IV++LN  +           T  P EEP+YSPDELGG++P+D ++PFDVR VIAR+VDGSRF EFK  YGPTIVTGFAR++G   GIVANNGILFSES++KAAHFIELCSQR IPL+FLQNITGFMVG+K E+ GIAK+GAK+V AVS +KVPKIT +I GSYGAGNYGMCGRAFSPRFL+MWPNA+ISVMGGEQAA VLA V         + W++ EE+AFK PIL K+ KESS YYS+AR
Sbjct:   65 VAKARQGGGESARKRHESRGKMPVRDRIDSLLDPGSPFLELSPLAAYDMYGGD-VPSAGIVTGIGRINGVECMILGNDATVKGGTYFPLTVKKHLRAQEIAQENRLPCVYLVDSGGAFLPLQADIFPDRDHFGREFYNQATMSAMGIPQIAVVMGSCTAGGAYVPAMSDESVIVKGNGTVFLGGPPLVKAATGEVITPEELGGADVHCRTSGVTDHYANNDAHALDITRRIVSNLNYRKEPAI-------TQTPIEEPIYSPDELGGVIPVDSRKPFDVRKVIARIVDGSRFDEFKKEYGPTIVTGFARLYGNPVGIVANNGILFSESSVKAAHFIELCSQRGIPLLFLQNITGFMVGKKAEHGGIAKDGAKMVMAVSNAKVPKITCIIGGSYGAGNYGMCGRAFSPRFLYMWPNARISVMGGEQAAGVLAQVQRDNYERRKETWSAEEEAAFKQPILDKYEKESSAYYSTAR 529          
BLAST of EWM23491.1 vs. NCBI_GenBank
Match: gi|1214710977|gb|OWZ22021.1| (Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial [Phytophthora megakarya])

HSP 1 Score: 703.745 bits (1815), Expect = 0.000e+0
Identity = 337/468 (72.01%), Postives = 397/468 (84.83%), Query Frame = 0
Query:   76 QGGGELARSKHEQRGKLYVRERIERLVDPGTPFLELSPLAGRELYDQDKVPAGGIVTGIGRVAGLECMLVANDATVKGGTYYPITVKKHLRAQEIASQNKLPCIYLVDSGGAFLPRQDEVFPDRDHFGRIFFNQANMSAAGIPQIAVVMGSCTAGGAYVPAMSDESVIVKGSGTIFLGGPPLVKAATGEVVSAEDLGGADVHCRTSGVVDHYATDDLHALEITRSIVASLNVPEARTAAFSPNGKTGGPYEEPLYSPDELGGLVPLDPKRPFDVRSVIARVVDGSRFQEFKAFYGPTIVTGFARIHGILTGIVANNGILFSESALKAAHFIELCSQRHIPLVFLQNITGFMVGRKYENEGIAKNGAKLVTAVSTSKVPKITLLIAGSYGAGNYGMCGRAFSPRFLFMWPNAKISVMGGEQAANVLATVAAQG-----KDWTSVEESAFKAPILAKFSKESSCYYSSAR 538
            QGGGE AR++HE RGK+ VR+RI+ L+DPG+PFLELSPLA  ++Y +  VP+ GIVTGIGR+ G+ECM++ NDATVKGGTY+P+TVKKHLRAQEIA +N+LPC+YLVDSGGAFLP Q ++FPDRDHFGR F+NQA MSA GIPQIAVVMGSCTAGGAYVPAMSDESVIVKG+GT+FLGGPPLVKAATGEV++ E+LGGADVHCRTSGV DH+A +D HAL+ITR IV++LN  +  T        T  P EEP+YSP+ELGG++P+D ++PFDVR VIAR+VDGSRF EFK  YGPTIVTGFAR++G   GIVANNGILFSES++KAAHFIELCSQR IPL+FLQNITGFMVG+K E+ GIAK+GAK+V AVS +KVPKIT +I GSYGAGNYGMCGRAFSPRFL+MWPNA+ISVMGGEQAA VLA V         + W+  EE+AFK PIL K+ KESS YYS+AR
Sbjct:   69 QGGGEAARARHESRGKMPVRDRIDSLLDPGSPFLELSPLAAYDMY-EGSVPSAGIVTGIGRINGIECMILGNDATVKGGTYFPLTVKKHLRAQEIAQENRLPCVYLVDSGGAFLPLQADIFPDRDHFGREFYNQATMSAMGIPQIAVVMGSCTAGGAYVPAMSDESVIVKGNGTVFLGGPPLVKAATGEVITPEELGGADVHCRTSGVTDHFANNDAHALDITRRIVSNLNYRKEATV-------TQTPIEEPIYSPEELGGVIPVDSRKPFDVRKVIARIVDGSRFDEFKKEYGPTIVTGFARLYGNPVGIVANNGILFSESSVKAAHFIELCSQRGIPLLFLQNITGFMVGKKAEHGGIAKDGAKMVMAVSNAKVPKITCIIGGSYGAGNYGMCGRAFSPRFLYMWPNARISVMGGEQAAGVLAQVQRDNYERRKETWSEEEEAAFKQPILDKYEKESSAYYSTAR 528          
BLAST of EWM23491.1 vs. NCBI_GenBank
Match: gi|567996568|gb|ETL46675.1| (hypothetical protein L916_03468 [Phytophthora parasitica])

HSP 1 Score: 703.745 bits (1815), Expect = 0.000e+0
Identity = 338/473 (71.46%), Postives = 398/473 (84.14%), Query Frame = 0
Query:   71 LGQVYQGGGELARSKHEQRGKLYVRERIERLVDPGTPFLELSPLAGRELYDQDKVPAGGIVTGIGRVAGLECMLVANDATVKGGTYYPITVKKHLRAQEIASQNKLPCIYLVDSGGAFLPRQDEVFPDRDHFGRIFFNQANMSAAGIPQIAVVMGSCTAGGAYVPAMSDESVIVKGSGTIFLGGPPLVKAATGEVVSAEDLGGADVHCRTSGVVDHYATDDLHALEITRSIVASLNVPEARTAAFSPNGKTGGPYEEPLYSPDELGGLVPLDPKRPFDVRSVIARVVDGSRFQEFKAFYGPTIVTGFARIHGILTGIVANNGILFSESALKAAHFIELCSQRHIPLVFLQNITGFMVGRKYENEGIAKNGAKLVTAVSTSKVPKITLLIAGSYGAGNYGMCGRAFSPRFLFMWPNAKISVMGGEQAANVLATVAAQG-----KDWTSVEESAFKAPILAKFSKESSCYYSSAR 538
            + +  QGGGE AR +HE RGK+ VR+RI+ L+DPG+PFLELSPLA  ++Y  D VP+ GIVTGIGR+ G+ECM++ NDATVKGGTY+P+TVKKHLRAQEIA +N+LPC+YLVDSGGAFLP Q ++FPDRDHFGR F+NQA MSA GIPQIAVVMGSCTAGGAYVPAMSDESVIVKG+GT+FLGGPPLVKAATGEV++ E+LGGADVHCRTSGV DHYA +D HAL+ITR IV++LN  +           T  P EEP+YSPDELGG++P+D ++PFDVR V+AR+VDGSRF EFK  YGPTIVTGFAR++G   GIVANNGILFSES++KAAHFIELCSQR IPL+FLQNITGFMVG+K E+ GIAK+GAK+V AVS +KVPKIT +I GSYGAGNYGMCGRAFSPRFL+MWPNA+ISVMGGEQAA VLA V         + W++ EE+AFK PIL K+ KESS YYS+AR
Sbjct:   65 VAKARQGGGESARKRHESRGKMPVRDRIDSLLDPGSPFLELSPLAAYDMYGGD-VPSAGIVTGIGRINGVECMILGNDATVKGGTYFPLTVKKHLRAQEIAQENRLPCVYLVDSGGAFLPLQADIFPDRDHFGREFYNQATMSAMGIPQIAVVMGSCTAGGAYVPAMSDESVIVKGNGTVFLGGPPLVKAATGEVITPEELGGADVHCRTSGVTDHYANNDAHALDITRRIVSNLNYRKEPAV-------TQTPIEEPIYSPDELGGVIPVDSRKPFDVRKVVARIVDGSRFDEFKKEYGPTIVTGFARLYGNPVGIVANNGILFSESSVKAAHFIELCSQRGIPLLFLQNITGFMVGKKAEHGGIAKDGAKMVMAVSNAKVPKITCIIGGSYGAGNYGMCGRAFSPRFLYMWPNARISVMGGEQAAGVLAQVQRDNYERRKETWSAEEEAAFKQPILDKYEKESSAYYSTAR 529          
BLAST of EWM23491.1 vs. NCBI_GenBank
Match: gi|567968118|gb|ETK93268.1| (hypothetical protein L915_03517 [Phytophthora parasitica])

HSP 1 Score: 703.745 bits (1815), Expect = 0.000e+0
Identity = 338/473 (71.46%), Postives = 398/473 (84.14%), Query Frame = 0
Query:   71 LGQVYQGGGELARSKHEQRGKLYVRERIERLVDPGTPFLELSPLAGRELYDQDKVPAGGIVTGIGRVAGLECMLVANDATVKGGTYYPITVKKHLRAQEIASQNKLPCIYLVDSGGAFLPRQDEVFPDRDHFGRIFFNQANMSAAGIPQIAVVMGSCTAGGAYVPAMSDESVIVKGSGTIFLGGPPLVKAATGEVVSAEDLGGADVHCRTSGVVDHYATDDLHALEITRSIVASLNVPEARTAAFSPNGKTGGPYEEPLYSPDELGGLVPLDPKRPFDVRSVIARVVDGSRFQEFKAFYGPTIVTGFARIHGILTGIVANNGILFSESALKAAHFIELCSQRHIPLVFLQNITGFMVGRKYENEGIAKNGAKLVTAVSTSKVPKITLLIAGSYGAGNYGMCGRAFSPRFLFMWPNAKISVMGGEQAANVLATVAAQG-----KDWTSVEESAFKAPILAKFSKESSCYYSSAR 538
            + +  QGGGE AR +HE RGK+ VR+RI+ L+DPG+PFLELSPLA  ++Y  D VP+ GIVTGIGR+ G+ECM++ NDATVKGGTY+P+TVKKHLRAQEIA +N+LPC+YLVDSGGAFLP Q ++FPDRDHFGR F+NQA MSA GIPQIAVVMGSCTAGGAYVPAMSDESVIVKG+GT+FLGGPPLVKAATGEV++ E+LGGADVHCRTSGV DHYA +D HAL+ITR IV++LN  +           T  P EEP+YSPDELGG++P+D ++PFDVR V+AR+VDGSRF EFK  YGPTIVTGFAR++G   GIVANNGILFSES++KAAHFIELCSQR IPL+FLQNITGFMVG+K E+ GIAK+GAK+V AVS +KVPKIT +I GSYGAGNYGMCGRAFSPRFL+MWPNA+ISVMGGEQAA VLA V         + W++ EE+AFK PIL K+ KESS YYS+AR
Sbjct:   65 VAKARQGGGESARKRHESRGKMPVRDRIDSLLDPGSPFLELSPLAAYDMYGGD-VPSAGIVTGIGRINGVECMILGNDATVKGGTYFPLTVKKHLRAQEIAQENRLPCVYLVDSGGAFLPLQADIFPDRDHFGREFYNQATMSAMGIPQIAVVMGSCTAGGAYVPAMSDESVIVKGNGTVFLGGPPLVKAATGEVITPEELGGADVHCRTSGVTDHYANNDAHALDITRRIVSNLNYRKEPAV-------TQTPIEEPIYSPDELGGVIPVDSRKPFDVRKVVARIVDGSRFDEFKKEYGPTIVTGFARLYGNPVGIVANNGILFSESSVKAAHFIELCSQRGIPLLFLQNITGFMVGKKAEHGGIAKDGAKMVMAVSNAKVPKITCIIGGSYGAGNYGMCGRAFSPRFLYMWPNARISVMGGEQAAGVLAQVQRDNYERRKETWSAEEEAAFKQPILDKYEKESSAYYSTAR 529          
BLAST of EWM23491.1 vs. NCBI_GenBank
Match: gi|970660784|gb|KUF98307.1| (hypothetical protein AM588_10009698 [Phytophthora nicotianae])

HSP 1 Score: 702.59 bits (1812), Expect = 0.000e+0
Identity = 339/473 (71.67%), Postives = 398/473 (84.14%), Query Frame = 0
Query:   71 LGQVYQGGGELARSKHEQRGKLYVRERIERLVDPGTPFLELSPLAGRELYDQDKVPAGGIVTGIGRVAGLECMLVANDATVKGGTYYPITVKKHLRAQEIASQNKLPCIYLVDSGGAFLPRQDEVFPDRDHFGRIFFNQANMSAAGIPQIAVVMGSCTAGGAYVPAMSDESVIVKGSGTIFLGGPPLVKAATGEVVSAEDLGGADVHCRTSGVVDHYATDDLHALEITRSIVASLNVPEARTAAFSPNGKTGGPYEEPLYSPDELGGLVPLDPKRPFDVRSVIARVVDGSRFQEFKAFYGPTIVTGFARIHGILTGIVANNGILFSESALKAAHFIELCSQRHIPLVFLQNITGFMVGRKYENEGIAKNGAKLVTAVSTSKVPKITLLIAGSYGAGNYGMCGRAFSPRFLFMWPNAKISVMGGEQAANVLATVAAQG-----KDWTSVEESAFKAPILAKFSKESSCYYSSAR 538
            + +  QGGGE AR +HE RGK+ VR+RI+ L+DPG+PFLELSPLA  ++Y  D VP+ GIVTGIGR+ G+ECM++ NDATVKGGTY+P+TVKKHLRAQEIA +N+LPC+YLVDSGGAFLP Q ++FPDRDHFGR F+NQA MSA GIPQIAVVMGSCTAGGAYVPAMSDESVIVKG+GT+FLGGPPLVKAATGEV++ E+LGGADVHCRTSGV DHYA +D HAL+ITR IV++LN  +           T  P EEP+YSPDELGG++P+D ++PFDVR VIAR+VDGSRF EFK  YGPTIVTGFAR++G   GIVANNGILFSES++KAAHFIELCSQR IPL+FLQNITGFMVG+K E+ GIAK+GAK+V AVS +KVPKIT +I GSYGAGNYGMCGRAFSPRFL+MWPNA+ISVMGGEQAA VLA V         + W++ EE+AFK PIL K+ KESS YYS+AR
Sbjct:   12 VAKARQGGGESARKRHESRGKMPVRDRIDSLLDPGSPFLELSPLAAYDMYGGD-VPSAGIVTGIGRINGVECMILGNDATVKGGTYFPLTVKKHLRAQEIAQENRLPCVYLVDSGGAFLPLQADIFPDRDHFGREFYNQATMSAMGIPQIAVVMGSCTAGGAYVPAMSDESVIVKGNGTVFLGGPPLVKAATGEVITPEELGGADVHCRTSGVTDHYANNDAHALDITRRIVSNLNYRKEPAV-------TQTPIEEPIYSPDELGGVIPVDSRKPFDVRKVIARIVDGSRFDEFKKEYGPTIVTGFARLYGNPVGIVANNGILFSESSVKAAHFIELCSQRGIPLLFLQNITGFMVGKKAEHGGIAKDGAKMVMAVSNAKVPKITCIIGGSYGAGNYGMCGRAFSPRFLYMWPNARISVMGGEQAAGVLAQVQRDNYERRKETWSAEEEAAFKQPILDKYEKESSAYYSTAR 476          
BLAST of EWM23491.1 vs. NCBI_GenBank
Match: gi|301110198|ref|XP_002904179.1| (methylcrotonoyl-CoA carboxylase beta chain, mitochondrial precursor [Phytophthora infestans T30-4] >gi|262096305|gb|EEY54357.1| methylcrotonoyl-CoA carboxylase beta chain, mitochondrial precursor [Phytophthora infestans T30-4])

HSP 1 Score: 701.434 bits (1809), Expect = 0.000e+0
Identity = 339/468 (72.44%), Postives = 395/468 (84.40%), Query Frame = 0
Query:   76 QGGGELARSKHEQRGKLYVRERIERLVDPGTPFLELSPLAGRELYDQDKVPAGGIVTGIGRVAGLECMLVANDATVKGGTYYPITVKKHLRAQEIASQNKLPCIYLVDSGGAFLPRQDEVFPDRDHFGRIFFNQANMSAAGIPQIAVVMGSCTAGGAYVPAMSDESVIVKGSGTIFLGGPPLVKAATGEVVSAEDLGGADVHCRTSGVVDHYATDDLHALEITRSIVASLNVPEARTAAFSPNGKTGGPYEEPLYSPDELGGLVPLDPKRPFDVRSVIARVVDGSRFQEFKAFYGPTIVTGFARIHGILTGIVANNGILFSESALKAAHFIELCSQRHIPLVFLQNITGFMVGRKYENEGIAKNGAKLVTAVSTSKVPKITLLIAGSYGAGNYGMCGRAFSPRFLFMWPNAKISVMGGEQAANVLATVAAQG-----KDWTSVEESAFKAPILAKFSKESSCYYSSAR 538
            QGGGE AR +HE RGK+ VR+RI+ L+DPG+PFLELSPLA  ++Y    VP+ GIVTGIGR+ G+ECM++ NDATVKGGTY+P+TVKKHLRAQEIA +N+LPC+YLVDSGGAFLP Q ++FPDRDHFGR F+NQA MSA GIPQIAVVMGSCTAGGAYVPAMSDESVIVKG+GT+FLGGPPLVKAATGEV++ E+LGGADVHCRTSGV DHYA +D HAL+ITR IV++LN  +           T  P EEP+YSPDELGG++P+D ++PFDVR VIAR+VDGSRF EFK  YGPTIVTGFAR++G   GIVANNGILFSES++KAAHFIELCSQR IPL+FLQNITGFMVG+K E+ GIAK+GAK+V AVS +KVPKIT +I GSYGAGNYGMCGRAFSPRFL+MWPNA+ISVMGGEQAA VLA V         + WT+ EE+AFK PIL K+ KESS YYS+AR
Sbjct:   73 QGGGESARKRHESRGKMPVRDRIDSLLDPGSPFLELSPLAAYDMYG-GGVPSAGIVTGIGRINGVECMILGNDATVKGGTYFPLTVKKHLRAQEIAQENRLPCVYLVDSGGAFLPLQADIFPDRDHFGREFYNQATMSAMGIPQIAVVMGSCTAGGAYVPAMSDESVIVKGNGTVFLGGPPLVKAATGEVITPEELGGADVHCRTSGVTDHYANNDAHALDITRRIVSNLNYRKEPAV-------TQTPIEEPVYSPDELGGVIPVDSRKPFDVRKVIARIVDGSRFDEFKKEYGPTIVTGFARLYGNPVGIVANNGILFSESSVKAAHFIELCSQRGIPLLFLQNITGFMVGKKAEHGGIAKDGAKMVMAVSNAKVPKITCIIGGSYGAGNYGMCGRAFSPRFLYMWPNARISVMGGEQAAGVLAQVQRDNYERRQETWTTEEEAAFKQPILDKYEKESSAYYSTAR 532          
BLAST of EWM23491.1 vs. NCBI_GenBank
Match: gi|695456771|ref|XP_009537034.1| (hypothetical protein PHYSODRAFT_565421 [Phytophthora sojae] >gi|348667643|gb|EGZ07468.1| hypothetical protein PHYSODRAFT_565421 [Phytophthora sojae])

HSP 1 Score: 701.434 bits (1809), Expect = 0.000e+0
Identity = 337/474 (71.10%), Postives = 398/474 (83.97%), Query Frame = 0
Query:   71 LGQVYQGGGELARSKHEQRGKLYVRERIERLVDPGTPFLELSPLAGRELYDQD-KVPAGGIVTGIGRVAGLECMLVANDATVKGGTYYPITVKKHLRAQEIASQNKLPCIYLVDSGGAFLPRQDEVFPDRDHFGRIFFNQANMSAAGIPQIAVVMGSCTAGGAYVPAMSDESVIVKGSGTIFLGGPPLVKAATGEVVSAEDLGGADVHCRTSGVVDHYATDDLHALEITRSIVASLNVPEARTAAFSPNGKTGGPYEEPLYSPDELGGLVPLDPKRPFDVRSVIARVVDGSRFQEFKAFYGPTIVTGFARIHGILTGIVANNGILFSESALKAAHFIELCSQRHIPLVFLQNITGFMVGRKYENEGIAKNGAKLVTAVSTSKVPKITLLIAGSYGAGNYGMCGRAFSPRFLFMWPNAKISVMGGEQAANVLATVAAQG-----KDWTSVEESAFKAPILAKFSKESSCYYSSAR 538
            + +  QGGGE AR +HE RGK+ VR+RI+ L+D G+PFLELS LA   +Y  +  VP+ GIVTGIGR+AG+ECM++ NDATVKGGTY+P+TVKKHLRAQEIA +N+LPC+YLVDSGGAFLP Q ++FPDRDHFGR F+NQANMSA GIPQIAVVMGSCTAGGAYVPAMSDESVIVKG+GT+FLGGPPLVKAATGEV++ E+LGGADVHCRTSGV DHYA +D HAL+ITR IV++LN  +           T  P EEPLYSPDELGG++P+D ++PFDVR VIAR+VDGSRF EFK  YGPT+VTGFAR++G   GIVANNGILFSES++KAAHFIELCSQR IPL+FLQNITGFMVG+K E+ GIAK+GAK+V AVS +KVPKIT +I GSYGAGNYGMCGRAFSPRFL+MWPNA+ISVMGGEQAA VLA V         ++W++ EE+AFK PIL K+ +ESS YYS+AR
Sbjct:   74 VARTRQGGGETARKRHESRGKMLVRDRIDSLLDAGSPFLELSSLAAYNVYGGEFDVPSAGIVTGIGRIAGVECMILGNDATVKGGTYFPLTVKKHLRAQEIAQENRLPCVYLVDSGGAFLPLQADIFPDRDHFGREFYNQANMSAMGIPQIAVVMGSCTAGGAYVPAMSDESVIVKGNGTVFLGGPPLVKAATGEVITPEELGGADVHCRTSGVTDHYANNDAHALDITRRIVSNLNYRKQPAV-------TQTPIEEPLYSPDELGGVIPVDSRKPFDVRKVIARIVDGSRFDEFKKEYGPTMVTGFARLYGNPVGIVANNGILFSESSVKAAHFIELCSQRGIPLLFLQNITGFMVGKKAEHGGIAKDGAKMVMAVSNAKVPKITCIIGGSYGAGNYGMCGRAFSPRFLYMWPNARISVMGGEQAAGVLAQVQRDNYERRKENWSTEEEAAFKQPILDKYERESSAYYSTAR 540          
BLAST of EWM23491.1 vs. NCBI_GenBank
Match: gi|921309105|ref|WP_053243787.1| (methylcrotonoyl-CoA carboxylase [Achromobacter sp. DMS1] >gi|918215114|gb|KOF55429.1| methylcrotonoyl-CoA carboxylase [Achromobacter sp. DMS1])

HSP 1 Score: 690.263 bits (1780), Expect = 0.000e+0
Identity = 334/473 (70.61%), Postives = 388/473 (82.03%), Query Frame = 0
Query:   71 LGQVYQGGGELARSKHEQRGKLYVRERIERLVDPGTPFLELSPLAGRELYDQDKVPAGGIVTGIGRVAGLECMLVANDATVKGGTYYPITVKKHLRAQEIASQNKLPCIYLVDSGGAFLPRQDEVFPDRDHFGRIFFNQANMSAAGIPQIAVVMGSCTAGGAYVPAMSDESVIVKGSGTIFLGGPPLVKAATGEVVSAEDLGGADVHCRTSGVVDHYATDDLHALEITRSIVASLNVPEARTAAFSPNGKTGGPYEEPLYSPDELGGLVPLDPKRPFDVRSVIARVVDGSRFQEFKAFYGPTIVTGFARIHGILTGIVANNGILFSESALKAAHFIELCSQRHIPLVFLQNITGFMVGRKYENEGIAKNGAKLVTAVSTSKVPKITLLIAGSYGAGNYGMCGRAFSPRFLFMWPNAKISVMGGEQAANVLATV-----AAQGKDWTSVEESAFKAPILAKFSKESSCYYSSAR 538
            L Q  QGG E AR+KH  RGKL  RER+ERL+DPG+PFLELSPLA   +Y+ D+ P  GI+TGIGR+AG EC++V NDATVKGGTYYP+TVKKHLRAQEIA+QN+LPC+YLVDSGGA LPRQDEVFPDRDHFGRIF+NQA MS+ GI QIAVVMGSCTAGGAYVPAMSDES+IV+  GTIFLGGPPLVKAATGE VSAEDLGG DVH R SGV DH A +D+HAL++ R+ VA LN+ + +  A  P         EP Y P EL G++P D ++P+DVR VIAR+VDGS F EFKA +GPT+VTGFA IHG+  GIVANNGILFSESA K AHFIELC+QR IPLVFLQNITGFMVGRKYENEGIA++GAK+VTAV+T+ VPK T+LI GS+GAGNYGMCGRA+SPR LFMWPNA+ISVMGGEQAA+VLATV      A+G  W + EE AFKAPI A++ +E   YY++AR
Sbjct:   33 LAQAAQGGSESARAKHVARGKLLPRERVERLIDPGSPFLELSPLAAHGMYN-DEAPGAGIITGIGRIAGTECVIVCNDATVKGGTYYPMTVKKHLRAQEIAAQNRLPCVYLVDSGGANLPRQDEVFPDRDHFGRIFYNQAQMSSQGIAQIAVVMGSCTAGGAYVPAMSDESIIVRNQGTIFLGGPPLVKAATGEEVSAEDLGGGDVHTRLSGVADHLAANDMHALQLARNAVARLNLKKPQPLALKPA-------REPRYDPAELDGIIPADTRKPYDVREVIARIVDGSEFDEFKARFGPTLVTGFAHIHGMPVGIVANNGILFSESAQKGAHFIELCAQRKIPLVFLQNITGFMVGRKYENEGIARHGAKMVTAVATAAVPKFTVLIGGSFGAGNYGMCGRAYSPRMLFMWPNARISVMGGEQAASVLATVKRDGIEARGGQWPAEEEEAFKAPIRAQYEREGHPYYATAR 497          
The following BLAST results are available for this feature:
BLAST of EWM23491.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585104561|gb|EWM23491.1|0.000e+0100.00propionyl- carboxylase [Nannochloropsis gaditana][more]
gi|675183887|ref|XP_008900828.1|0.000e+071.67methylcrotonoyl-CoA carboxylase beta chain, mitoch... [more]
gi|568056266|gb|ETM52978.1|0.000e+071.67methylcrotonoyl-CoA carboxylase beta chain, mitoch... [more]
gi|1214710977|gb|OWZ22021.1|0.000e+072.01Methylcrotonoyl-CoA carboxylase beta chain, mitoch... [more]
gi|567996568|gb|ETL46675.1|0.000e+071.46hypothetical protein L916_03468 [Phytophthora para... [more]
gi|567968118|gb|ETK93268.1|0.000e+071.46hypothetical protein L915_03517 [Phytophthora para... [more]
gi|970660784|gb|KUF98307.1|0.000e+071.67hypothetical protein AM588_10009698 [Phytophthora ... [more]
gi|301110198|ref|XP_002904179.1|0.000e+072.44methylcrotonoyl-CoA carboxylase beta chain, mitoch... [more]
gi|695456771|ref|XP_009537034.1|0.000e+071.10hypothetical protein PHYSODRAFT_565421 [Phytophtho... [more]
gi|921309105|ref|WP_053243787.1|0.000e+070.61methylcrotonoyl-CoA carboxylase [Achromobacter sp.... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7198rna7198Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications