EWM23497.1, cds7173 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23497.1 vs. NCBI_GenBank
Match: gi|585104568|gb|EWM23497.1| (myotubularin related protein 3 [Nannochloropsis gaditana]) HSP 1 Score: 756.518 bits (1952), Expect = 0.000e+0 Identity = 365/365 (100.00%), Postives = 365/365 (100.00%), Query Frame = 0
Query: 1 MDPFASSPCFLPPSLPPSITPSLPPNQDLRSADAMALHAALERNGTSFVRTASPRGPDAGYLSMDGQRREKFLVIDARPQLSARANQAARGMGFENTPQYKQVCRVLFMGVSNIHVIRKSWDALEVLCRRREGEGGGFGMQVENTRWLFHLHKVLAGALLIAHLMHHHGVSLLVHCSDGWDRTAQLCATAQLLMDPFYRTLTGFQALIHKDWVAFGHNFTRRNGLDRQGYASNERAPIFVQWLDVVHQILRQFPNRFQFTEGLLLFLARHAHAGWTGDFLYNCERERTEARVTERSISIFALIDANRHRFLNPAYQSSSSASSSSSLLTPVTSSKRLVLWEAYFFSWQTELYELAWRQGTGHLPA 365
MDPFASSPCFLPPSLPPSITPSLPPNQDLRSADAMALHAALERNGTSFVRTASPRGPDAGYLSMDGQRREKFLVIDARPQLSARANQAARGMGFENTPQYKQVCRVLFMGVSNIHVIRKSWDALEVLCRRREGEGGGFGMQVENTRWLFHLHKVLAGALLIAHLMHHHGVSLLVHCSDGWDRTAQLCATAQLLMDPFYRTLTGFQALIHKDWVAFGHNFTRRNGLDRQGYASNERAPIFVQWLDVVHQILRQFPNRFQFTEGLLLFLARHAHAGWTGDFLYNCERERTEARVTERSISIFALIDANRHRFLNPAYQSSSSASSSSSLLTPVTSSKRLVLWEAYFFSWQTELYELAWRQGTGHLPA
Sbjct: 1 MDPFASSPCFLPPSLPPSITPSLPPNQDLRSADAMALHAALERNGTSFVRTASPRGPDAGYLSMDGQRREKFLVIDARPQLSARANQAARGMGFENTPQYKQVCRVLFMGVSNIHVIRKSWDALEVLCRRREGEGGGFGMQVENTRWLFHLHKVLAGALLIAHLMHHHGVSLLVHCSDGWDRTAQLCATAQLLMDPFYRTLTGFQALIHKDWVAFGHNFTRRNGLDRQGYASNERAPIFVQWLDVVHQILRQFPNRFQFTEGLLLFLARHAHAGWTGDFLYNCERERTEARVTERSISIFALIDANRHRFLNPAYQSSSSASSSSSLLTPVTSSKRLVLWEAYFFSWQTELYELAWRQGTGHLPA 365
BLAST of EWM23497.1 vs. NCBI_GenBank
Match: gi|553191551|ref|XP_005855398.1| (myotubularin related protein 3 [Nannochloropsis gaditana CCMP526] >gi|422293661|gb|EKU20961.1| myotubularin related protein 3 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 489.96 bits (1260), Expect = 1.978e-171 Identity = 246/295 (83.39%), Postives = 247/295 (83.73%), Query Frame = 0
Query: 109 MGVSNIHVIRKSWDALEVLCRRREGEGGGFGMQVENTRWLFHLHKVLAGALLIAHLMHHHGVSLLVHCSDGWDRTAQLCATAQLLMDPFYRTLTGFQ-----------------------------------------------ALIHKDWVAFGHNFTRRNGLDRQGYASNERAPIFVQWLDVVHQILRQFPNRFQFTEGLLLFLARHAHAGWTGDFLYNCERERTEARVTERSISIFALIDANRHRFLNPAYQSSSSASSSSSLLTPVTSSKRLVLWEAYFFSWQTELYELAW 356
MGVSNIHVIRKSWDALEVLCRRREGEGGGFGMQVENTRWLFHLHKVLAGALLIAHLMHHHGVSLLVHCSDGWDRTAQLCATAQLLMDPFYRTLTGFQ ALIHKDWVAFGHNFTRRNGLDRQGYASNERAPIFVQWLDVVHQILRQFPNRFQFTEGLLLFLARHAHAGWTGDFLYNCERERTEARVTERSISIFALIDANRHRFLNPAYQSSSSASSSSSLLTPVTSSKRLVLWEAYFFSWQTELYEL +
Sbjct: 1 MGVSNIHVIRKSWDALEVLCRRREGEGGGFGMQVENTRWLFHLHKVLAGALLIAHLMHHHGVSLLVHCSDGWDRTAQLCATAQLLMDPFYRTLTGFQVKGWKIGRRGGRQRGREGNIREVVPSSRRRAGPPLAPTSCLALSPRQALIHKDWVAFGHNFTRRNGLDRQGYASNERAPIFVQWLDVVHQILRQFPNRFQFTEGLLLFLARHAHAGWTGDFLYNCERERTEARVTERSISIFALIDANRHRFLNPAYQSSSSASSSSSLLTPVTSSKRLVLWEAYFFSWQTELYELGY 295
BLAST of EWM23497.1 vs. NCBI_GenBank
Match: gi|678989106|gb|KFV96812.1| (Myotubularin-related protein 3, partial [Fulmarus glacialis]) HSP 1 Score: 232.646 bits (592), Expect = 2.262e-68 Identity = 120/276 (43.48%), Postives = 167/276 (60.51%), Query Frame = 0
Query: 70 EKFLVIDARPQLSARANQAARGMGFENTPQYKQVCRVLFMGVSNIHVIRKSWDALEVLCRRREGEGGGFGMQVENTRWLFHLHKVLAGALLIAHLMHHHGVSLLVHCSDGWDRTAQLCATAQLLMDPFYRTLTGFQALIHKDWVAFGHNFTRRNGLDRQGYASNERAPIFVQWLDVVHQILRQFPNRFQFTEGLLLFLARHAHAGWTGDFLYNCERERTEARVTERSISIFALIDANRHRFLNPAYQSSSSASSSSSLLTPVTSSKRLVLWEAYFF 345
+K L++DAR +A AN+A +G G E P+Y C V+FMG++NIH IRKS+ +L +LC + G +E+T+WL HL +L ALL+ H + +LVHCSDGWDRT Q+ A A+LL+DP+YRT GFQ L+ +W+ FGH F R G NER P+F+QWLD VHQ+ RQFP F+F E L+ L +H ++ G FL N +ER E ER+ S+++L+ A F N Y +S S S+L PV + L+LW A +
Sbjct: 87 QKLLILDARSYAAAVANRA-KGGGCE-CPEYYPNCEVVFMGMANIHSIRKSFQSLRLLCTQMPDPGNWLSA-LESTKWLQHLSVLLKSALLVVHAVDRDQRPVLVHCSDGWDRTPQIVALAKLLLDPYYRTTEGFQVLVETEWLDFGHKFADRCGHGENSDDLNERCPVFLQWLDCVHQLQRQFPCSFEFNEAFLVKLVQHTYSCLFGTFLCNNAKERGEKHTQERTCSVWSLLRAANKAFRNLLY-----SSQSESVLYPVCHVRNLMLWSAVYL 354
BLAST of EWM23497.1 vs. NCBI_GenBank
Match: gi|115744161|ref|XP_788958.2| (PREDICTED: myotubularin-related protein 2 isoform X2 [Strongylocentrotus purpuratus] >gi|780165368|ref|XP_011683683.1| PREDICTED: myotubularin-related protein 2 isoform X1 [Strongylocentrotus purpuratus]) HSP 1 Score: 234.958 bits (598), Expect = 1.084e-67 Identity = 119/297 (40.07%), Postives = 180/297 (60.61%), Query Frame = 0
Query: 58 DAGYLSM---DGQRREKFLVIDARPQLSARANQAARGMGFENTPQYKQVCRVLFMGVSNIHVIRKSWDALEVLCRRREGEGGGFGMQVENTRWLFHLHKVLAGALLIAHLMHHHGVSLLVHCSDGWDRTAQLCATAQLLMDPFYRTLTGFQALIHKDWVAFGHNFTRRNGLDRQGYASNERAPIFVQWLDVVHQILRQFPNRFQFTEGLLLFLARHAHAGWTGDFLYNCERERTEARVTERSISIFALIDANRHRFLNPAYQSSSSASSSSSLLTPVTSSKRLVLWEAYFFSWQTEL 351
D Y+ M + K +++DARP ++A AN+A +G G+EN Y Q + F+ + NIHV+R+S L+ +C E +E T WL H+ VLAGA+ IA + S++VHCSDGWDRTAQL A A LL+DP+YRT+ GF+ LI K+W+A GH +R+G + Y +R+PIF Q++D V Q+ RQFPN F+F E L+ + H ++ G FL+NCERER + +V +++S+++ I+++ F+NP Y S +L PV S +R+ LW +Y+ W +
Sbjct: 332 DEKYVQMILDANAQSHKLVIMDARPTVNAVANKA-KGGGYENEDTY-QNAEICFLDIHNIHVMRESLRKLKDICFPSIDEHHWLA-NLEATHWLEHVKMVLAGAVRIAERVEGQKTSVVVHCSDGWDRTAQLTALAMLLLDPYYRTIRGFEVLIEKEWLACGHKMAQRHGHGDKNYTDADRSPIFQQFIDCVWQVTRQFPNAFEFNEHFLITILDHLYSCLFGTFLFNCERERVKEQVKTKTVSLWSYINSSMEEFINPMYAS----YMHQHVLFPVASMRRIELWTSYYIRWNPRM 621
BLAST of EWM23497.1 vs. NCBI_GenBank
Match: gi|677307270|gb|KFP89698.1| (Myotubularin-related protein 3, partial [Apaloderma vittatum]) HSP 1 Score: 232.646 bits (592), Expect = 1.146e-67 Identity = 120/276 (43.48%), Postives = 167/276 (60.51%), Query Frame = 0
Query: 70 EKFLVIDARPQLSARANQAARGMGFENTPQYKQVCRVLFMGVSNIHVIRKSWDALEVLCRRREGEGGGFGMQVENTRWLFHLHKVLAGALLIAHLMHHHGVSLLVHCSDGWDRTAQLCATAQLLMDPFYRTLTGFQALIHKDWVAFGHNFTRRNGLDRQGYASNERAPIFVQWLDVVHQILRQFPNRFQFTEGLLLFLARHAHAGWTGDFLYNCERERTEARVTERSISIFALIDANRHRFLNPAYQSSSSASSSSSLLTPVTSSKRLVLWEAYFF 345
+K L++DAR +A AN+A +G G E P+Y C V+FMG++NIH IRKS+ +L +LC + G +E+T+WL HL +L ALL+ H + +LVHCSDGWDRT Q+ A A+LL+DP+YRT GFQ L+ +W+ FGH F R G NER P+F+QWLD VHQ+ RQFP F+F E L+ L +H ++ G FL N +ER E ER+ S+++L+ A F N Y +S S S+L PV + L+LW A +
Sbjct: 158 QKLLILDARSYAAAVANRA-KGGGCE-CPEYYPNCEVVFMGMANIHSIRKSFQSLRLLCTQMPDPGNWLSA-LESTKWLQHLSVLLKSALLVVHAVDRDQRPVLVHCSDGWDRTPQIVALAKLLLDPYYRTTEGFQVLVEMEWLDFGHKFADRCGHGENSDDLNERCPVFLQWLDCVHQLQRQFPCSFEFNEAFLVKLVQHTYSCLFGTFLCNNAKERGEKHTQERTCSVWSLLRAANKAFKNLLY-----SSQSESVLYPVCHVRNLMLWSAVYL 425
BLAST of EWM23497.1 vs. NCBI_GenBank
Match: gi|676379079|ref|XP_009032818.1| (hypothetical protein AURANDRAFT_1535, partial [Aureococcus anophagefferens] >gi|323456270|gb|EGB12137.1| hypothetical protein AURANDRAFT_1535, partial [Aureococcus anophagefferens]) HSP 1 Score: 226.868 bits (577), Expect = 1.383e-67 Identity = 113/278 (40.65%), Postives = 171/278 (61.51%), Query Frame = 0
Query: 72 FLVIDARPQLSARANQAARGMGFENTPQYKQVCRVLFMGVSNIHVIRKSWDAL-EVLCRRREGEGGGFGMQVENTRWLFHLHKVLAGALLIAHLMHHHGVSLLVHCSDGWDRTAQLCATAQLLMDPFYRTLTGFQALIHKDWVAFGHNFTRRNGLDRQGYASNERAPIFVQWLDVVHQILRQFPNRFQFTEGLLLFLARHAHAGWTGDFLYNCERERTEARVTERSISIFALIDANRHRFLNPAYQSSSSASSSSSLLTPVTSSKRLVLWEAYFFSWQ 348
LV+DAR L+ + NQ A G G E Y+ V R+ FMG++NIH +R + D L + +C G G ++ W L ++LA + + + HGV +LVHCSDGWDRT QL A + LLMDPFYRT+ GF L+ K+W A GH F R+G D +G+AS++R+P F+QW+D+VHQ+ RQ P+ F+F L+ +A A GWTG FL++C+R R ++ +R++S+++ ++A R F NP Y+ ++ P+ + LVL++A+F W
Sbjct: 115 LLVVDARSPLAVKGNQIAGGKGTETLEHYEGV-RISFMGIANIHAVRAAHDGLVDAVC----GRGDFAAACASSSGWFALLQRLLAAVVHVVDAVARHGVPVLVHCSDGWDRTPQLTAGSMLLMDPFYRTIRGFAVLVEKEWCACGHKFAERHGFDDKGHASSDRSPCFLQWIDLVHQVRRQAPDAFEFNVEFLVTVAAAASDGWTGTFLFDCDRLREAHKLKDRAVSLWSHVEARRRDFKNPTYR------PDDRVIYPLVGRQHLVLFDAWFQRWH 381
BLAST of EWM23497.1 vs. NCBI_GenBank
Match: gi|675622265|ref|XP_008939244.1| (PREDICTED: myotubularin-related protein 3, partial [Merops nubicus]) HSP 1 Score: 232.646 bits (592), Expect = 2.214e-67 Identity = 120/276 (43.48%), Postives = 167/276 (60.51%), Query Frame = 0
Query: 70 EKFLVIDARPQLSARANQAARGMGFENTPQYKQVCRVLFMGVSNIHVIRKSWDALEVLCRRREGEGGGFGMQVENTRWLFHLHKVLAGALLIAHLMHHHGVSLLVHCSDGWDRTAQLCATAQLLMDPFYRTLTGFQALIHKDWVAFGHNFTRRNGLDRQGYASNERAPIFVQWLDVVHQILRQFPNRFQFTEGLLLFLARHAHAGWTGDFLYNCERERTEARVTERSISIFALIDANRHRFLNPAYQSSSSASSSSSLLTPVTSSKRLVLWEAYFF 345
+K L++DAR +A AN+A +G G E P+Y C V+FMG++NIH IRKS+ +L +LC + G +E+T+WL HL +L ALL+ H + +LVHCSDGWDRT Q+ A A+LL+DP+YRT GFQ L+ +W+ FGH F R G NER P+F+QWLD VHQ+ RQFP F+F E L+ L +H ++ G FL N +ER E ER+ S+++L+ A F N Y +S S S+L PV + L+LW A +
Sbjct: 310 QKLLILDARSYAAAVANRA-KGGGCE-CPEYYPNCEVVFMGMANIHSIRKSFQSLRLLCTQMPDPGNWLSA-LESTKWLQHLSVLLKSALLVVHAVDRDQRPVLVHCSDGWDRTPQIVALAKLLLDPYYRTTEGFQVLVETEWLDFGHKFADRCGHGENSDDLNERCPVFLQWLDCVHQLQRQFPCSFEFNEAFLVKLVQHTYSCLFGTFLCNNAKERGEKHTQERTCSVWSLLRAANKAFKNLLY-----SSQSESVLYPVCHVRNLMLWSAVYL 577
BLAST of EWM23497.1 vs. NCBI_GenBank
Match: gi|1059872493|ref|XP_017791196.1| (PREDICTED: LOW QUALITY PROTEIN: myotubularin-related protein 6 [Habropoda laboriosa]) HSP 1 Score: 233.802 bits (595), Expect = 2.434e-67 Identity = 131/353 (37.11%), Postives = 201/353 (56.94%), Query Frame = 0
Query: 10 FLPPSLPPSITPSLPPNQDLRSADAMALHAALERNGTSFVRTASP------RGPDAG---YLSMDGQRREKFL-VIDARPQLSARANQAARGMGFENTPQYKQVCRVLFMGVSNIHVIRKSWDALEVLCRRREGEGGGFGMQVENTRWLFHLHKVLAGALLIAHLMHHHGVSLLVHCSDGWDRTAQLCATAQLLMDPFYRTLTGFQALIHKDWVAFGHNFTRRNGLDRQGYASNERAPIFVQWLDVVHQILRQFPNRFQFTEGLLLFLARHAHAGWTGDFLYNCERERTEARVTERSISIFALIDANRHRFLNPAYQSSSSASSSSSLLTPVTSSKRLVLWEAYFFSWQTELY 352
++P + +I L + RS + + L N + R + P R P+ Y + K++ V+D RP+++A AN+A G G+EN Y + + F G+ NIHV+R S + L L +R F +E+ WL H+ +L A IA + + GVS++VHCSDGWDRTAQ+C+ + LL+DP+YRT+ GFQALI KDW++FGH F+ R G S E APIF Q++D +Q+L+Q+P++FQF E LL L H H G F+ N E+ER RVTER+ S++ I N H ++NP Y+ + S +SS+L P + + + LW +F ++ +++
Sbjct: 163 YVPSTCACTI---LKGSAKFRSRGRLPVLTYLHSNKAAICRCSQPLSGFSARCPEDEQMMYNILCTNSNSKYMYVVDTRPRINAFANRAT-GKGYENENFYDNI-KFHFFGIENIHVMRTSLNKLIEL--QRTPSMSAFLSGLESCGWLKHIRSILEAAWFIARAVSN-GVSVVVHCSDGWDRTAQVCSLSALLLDPYYRTIQGFQALIEKDWLSFGHKFSDRCG--HISCDSKELAPIFTQFIDATYQLLQQYPHKFQFNEFFLLTLHDHVHNCQYGTFIGNSEKERHTLRVTERTYSLWGYIANNMHEYINPLYKCNRSNEDASSVLQPKLAPQSITLWRGMYFRFENDIH 505
BLAST of EWM23497.1 vs. NCBI_GenBank
Match: gi|677429492|gb|KFQ30379.1| (Myotubularin-related protein 3, partial [Merops nubicus]) HSP 1 Score: 232.261 bits (591), Expect = 2.592e-67 Identity = 120/276 (43.48%), Postives = 167/276 (60.51%), Query Frame = 0
Query: 70 EKFLVIDARPQLSARANQAARGMGFENTPQYKQVCRVLFMGVSNIHVIRKSWDALEVLCRRREGEGGGFGMQVENTRWLFHLHKVLAGALLIAHLMHHHGVSLLVHCSDGWDRTAQLCATAQLLMDPFYRTLTGFQALIHKDWVAFGHNFTRRNGLDRQGYASNERAPIFVQWLDVVHQILRQFPNRFQFTEGLLLFLARHAHAGWTGDFLYNCERERTEARVTERSISIFALIDANRHRFLNPAYQSSSSASSSSSLLTPVTSSKRLVLWEAYFF 345
+K L++DAR +A AN+A +G G E P+Y C V+FMG++NIH IRKS+ +L +LC + G +E+T+WL HL +L ALL+ H + +LVHCSDGWDRT Q+ A A+LL+DP+YRT GFQ L+ +W+ FGH F R G NER P+F+QWLD VHQ+ RQFP F+F E L+ L +H ++ G FL N +ER E ER+ S+++L+ A F N Y +S S S+L PV + L+LW A +
Sbjct: 310 QKLLILDARSYAAAVANRA-KGGGCE-CPEYYPNCEVVFMGMANIHSIRKSFQSLRLLCTQMPDPGNWLSA-LESTKWLQHLSVLLKSALLVVHAVDRDQRPVLVHCSDGWDRTPQIVALAKLLLDPYYRTTEGFQVLVETEWLDFGHKFADRCGHGENSDDLNERCPVFLQWLDCVHQLQRQFPCSFEFNEAFLVKLVQHTYSCLFGTFLCNNAKERGEKHTQERTCSVWSLLRAANKAFKNLLY-----SSQSESVLYPVCHVRNLMLWSAVYL 577
BLAST of EWM23497.1 vs. NCBI_GenBank
Match: gi|677082390|gb|KFP28848.1| (Myotubularin-related protein 3, partial [Colius striatus]) HSP 1 Score: 232.646 bits (592), Expect = 3.480e-67 Identity = 120/276 (43.48%), Postives = 167/276 (60.51%), Query Frame = 0
Query: 70 EKFLVIDARPQLSARANQAARGMGFENTPQYKQVCRVLFMGVSNIHVIRKSWDALEVLCRRREGEGGGFGMQVENTRWLFHLHKVLAGALLIAHLMHHHGVSLLVHCSDGWDRTAQLCATAQLLMDPFYRTLTGFQALIHKDWVAFGHNFTRRNGLDRQGYASNERAPIFVQWLDVVHQILRQFPNRFQFTEGLLLFLARHAHAGWTGDFLYNCERERTEARVTERSISIFALIDANRHRFLNPAYQSSSSASSSSSLLTPVTSSKRLVLWEAYFF 345
+K L++DAR +A AN+A +G G E P+Y C V+FMG++NIH IRKS+ +L +LC + G +E+T+WL HL +L ALL+ H + +LVHCSDGWDRT Q+ A A+LL+DP+YRT GFQ L+ +W+ FGH F R G NER P+F+QWLD VHQ+ RQFP F+F E L+ L +H ++ G FL N +ER E ER+ S+++L+ A F N Y +S S S+L PV + L+LW A +
Sbjct: 213 QKLLILDARSYAAAVANRA-KGGGCE-CPEYYPNCEVVFMGMANIHSIRKSFQSLRLLCTQMPDPGNWLSA-LESTKWLQHLSVLLKSALLVVHAVDRDQRPVLVHCSDGWDRTPQIVALAKLLLDPYYRTTEGFQVLVETEWLDFGHKFADRCGHGENSDDLNERCPVFLQWLDCVHQLQRQFPCSFEFNEAFLVKLVQHTYSCLFGTFLCNNAKERGEKHTQERTCSVWSLLRAANKAFKNLLY-----SSQSESVLYPVCHVRNLMLWSAVYL 480 The following BLAST results are available for this feature:
BLAST of EWM23497.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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