EWM29956.1, cds716 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29956.1 vs. NCBI_GenBank
Match: gi|585112550|gb|EWM29956.1| (smr domain-containing [Nannochloropsis gaditana]) HSP 1 Score: 287.73 bits (735), Expect = 2.176e-98 Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0 Query: 1 MKERHRAAGMAIFAARNPSERRIYQEGILDLHGLHVAEATEAVEELLPGIFAGGKVTEVTLITGTGKHSGGVSQHQARLFPAMEAYLQDLEAMVGEGRGRRGGSEGGRLYKCITDPQGYQAGLKVCLSRPLMEHWGLGELTR 142 MKERHRAAGMAIFAARNPSERRIYQEGILDLHGLHVAEATEAVEELLPGIFAGGKVTEVTLITGTGKHSGGVSQHQARLFPAMEAYLQDLEAMVGEGRGRRGGSEGGRLYKCITDPQGYQAGLKVCLSRPLMEHWGLGELTR Sbjct: 1 MKERHRAAGMAIFAARNPSERRIYQEGILDLHGLHVAEATEAVEELLPGIFAGGKVTEVTLITGTGKHSGGVSQHQARLFPAMEAYLQDLEAMVGEGRGRRGGSEGGRLYKCITDPQGYQAGLKVCLSRPLMEHWGLGELTR 142
BLAST of EWM29956.1 vs. NCBI_GenBank
Match: gi|325192207|emb|CCA26658.1| (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 74.3294 bits (181), Expect = 9.079e-13 Identity = 46/106 (43.40%), Postives = 62/106 (58.49%), Query Frame = 0 Query: 1 MKERHRAAGMAIFAARNPSERRIYQEGILDLHGLHVAEATEAVEELLPGIFAGGKVTEVTLITGTGKHSGGVSQHQARLFPAMEAYLQDLEAMVGEGRGRRGGSEG 106 MK+ H A IF +RNP E+ +Y++ ++DLHGLHV EA E + LP + G T V ++TGTG HS G Q+ ARL PA+E +L+ E E R G G Sbjct: 433 MKKLHLMAAEVIFKSRNPQEQ-VYRDRLMDLHGLHVVEAVEFLRSWLPQLAEDGLDT-VRIVTGTGHHSRG-PQNTARLLPAVEHFLRT-EGYESESVADRKGYVG 534
BLAST of EWM29956.1 vs. NCBI_GenBank
Match: gi|635362149|emb|CCI49043.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 72.7886 bits (177), Expect = 3.493e-12 Identity = 46/127 (36.22%), Postives = 70/127 (55.12%), Query Frame = 0 Query: 1 MKERHRAAGMAIFAARNPSERRIYQEGILDLHGLHVAEATEAVEELLPGIFAGGKVTEVTLITGTGKHSGGVSQHQARLFPAMEAYLQDLEAMVGEGRGRRGGSEGGRLYKCITDPQGYQAGLKVCL 127 MK+ H A IF +RNP +++Y++ ++DLHGLHV EA ++ LP + G + + ++TG G HS G Q+ ARL PA+E +L+ SEG YK + D +G+ L+V L Sbjct: 895 MKKLHLMAAEVIFKSRNP-HKQVYRDRLMDLHGLHVVEAVAFLQSWLPQLAEDG-LELIRIVTGAGHHSKG-PQNTARLLPAVEQFLR---------------SEGYE-YKSVVDRKGHVGMLQVNL 1002
BLAST of EWM29956.1 vs. NCBI_GenBank
Match: gi|669144408|ref|XP_008607766.1| (hypothetical protein SDRG_03897 [Saprolegnia diclina VS20] >gi|530740700|gb|EQC38942.1| hypothetical protein SDRG_03897 [Saprolegnia diclina VS20]) HSP 1 Score: 72.0182 bits (175), Expect = 5.965e-12 Identity = 41/87 (47.13%), Postives = 53/87 (60.92%), Query Frame = 0 Query: 1 MKERHRAAGMAIFAARNPSERRIYQEGILDLHGLHVAEATEAVEELLPGIFAGGKVTEVTLITGTGKHSGGVSQHQARLFPAMEAYL 87 MK+ H A IF ARNPS R +G+LDLHGLHVAEA E + +LLP + A + ++TG+G HS H RL PA+E +L Sbjct: 391 MKDAHYEAASLIFEARNPSYER---DGLLDLHGLHVAEALELLSQLLPTVTAET----ICIVTGSGHHS-----HHVRLKPAVERFL 465
BLAST of EWM29956.1 vs. NCBI_GenBank
Match: gi|970659409|gb|KUF97047.1| (Membrane metallo-endopeptidase 1 [Phytophthora nicotianae]) HSP 1 Score: 71.2478 bits (173), Expect = 7.093e-12 Identity = 39/87 (44.83%), Postives = 54/87 (62.07%), Query Frame = 0 Query: 1 MKERHRAAGMAIFAARNPSERRIYQEGILDLHGLHVAEATEAVEELLPGIFAGGKVTEVTLITGTGKHSGGVSQHQARLFPAMEAYL 87 MK H A IF +RNP ++Y + ++DLHGLHVAEA E + ++LP + G V + L+TG+G HS G ARL PA+E +L Sbjct: 233 MKNFHFLAASEIFESRNPP-NQLYMDRMMDLHGLHVAEAVEFLTQMLPKLADEG-VDSIYLVTGSGHHSKG-PDGNARLLPAVERFL 316
BLAST of EWM29956.1 vs. NCBI_GenBank
Match: gi|695413549|ref|XP_009526064.1| (hypothetical protein PHYSODRAFT_314545 [Phytophthora sojae] >gi|348677189|gb|EGZ17006.1| hypothetical protein PHYSODRAFT_314545 [Phytophthora sojae]) HSP 1 Score: 71.2478 bits (173), Expect = 8.891e-12 Identity = 39/87 (44.83%), Postives = 54/87 (62.07%), Query Frame = 0 Query: 1 MKERHRAAGMAIFAARNPSERRIYQEGILDLHGLHVAEATEAVEELLPGIFAGGKVTEVTLITGTGKHSGGVSQHQARLFPAMEAYL 87 MK H A IF +RNP ++Y + ++DLHGLHVAEA E + ++LP + A V + L+TG+G HS G ARL PA+E +L Sbjct: 493 MKNFHFLAASEIFESRNPP-NQLYMDRMMDLHGLHVAEAVEFLTQMLPKL-ADESVDSIYLVTGSGHHSKG-PDGNARLLPAVERFL 576
BLAST of EWM29956.1 vs. NCBI_GenBank
Match: gi|567945342|gb|ETK71153.1| (hypothetical protein, variant 1 [Phytophthora parasitica] >gi|567945343|gb|ETK71154.1| hypothetical protein, variant 2 [Phytophthora parasitica] >gi|570935292|gb|ETP00549.1| hypothetical protein, variant 1 [Phytophthora parasitica CJ01A1] >gi|570935293|gb|ETP00550.1| hypothetical protein, variant 2 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 70.4774 bits (171), Expect = 1.825e-11 Identity = 39/87 (44.83%), Postives = 54/87 (62.07%), Query Frame = 0 Query: 1 MKERHRAAGMAIFAARNPSERRIYQEGILDLHGLHVAEATEAVEELLPGIFAGGKVTEVTLITGTGKHSGGVSQHQARLFPAMEAYL 87 MK H A IF +RNP + +Y + ++DLHGLHVAEA E + ++LP + G V + L+TG+G HS G ARL PA+E +L Sbjct: 392 MKNFHFLAASEIFESRNPPNQ-LYMDRMMDLHGLHVAEAVEFLTQMLPKLADEG-VDSIYLVTGSGHHSKG-PDGNARLLPAVERFL 475
BLAST of EWM29956.1 vs. NCBI_GenBank
Match: gi|675195093|ref|XP_008906431.1| (hypothetical protein PPTG_12004 [Phytophthora parasitica INRA-310] >gi|566023151|gb|ETI46062.1| hypothetical protein, variant 1 [Phytophthora parasitica P1569] >gi|566023152|gb|ETI46063.1| hypothetical protein, variant 2 [Phytophthora parasitica P1569] >gi|567973952|gb|ETL24600.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|567973953|gb|ETL24601.1| hypothetical protein, variant 2 [Phytophthora parasitica] >gi|568018401|gb|ETL92575.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|568018402|gb|ETL92576.1| hypothetical protein, variant 2 [Phytophthora parasitica] >gi|568048837|gb|ETM45865.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|568048838|gb|ETM45866.1| hypothetical protein, variant 2 [Phytophthora parasitica] >gi|568093347|gb|ETN08143.1| hypothetical protein PPTG_12004 [Phytophthora parasitica INRA-310] >gi|570326798|gb|ETO74746.1| hypothetical protein, variant 1 [Phytophthora parasitica P1976] >gi|570326799|gb|ETO74747.1| hypothetical protein, variant 2 [Phytophthora parasitica P1976] >gi|570984288|gb|ETP43933.1| hypothetical protein, variant 1 [Phytophthora parasitica P10297] >gi|570984289|gb|ETP43934.1| hypothetical protein, variant 2 [Phytophthora parasitica P10297]) HSP 1 Score: 70.4774 bits (171), Expect = 1.825e-11 Identity = 39/87 (44.83%), Postives = 54/87 (62.07%), Query Frame = 0 Query: 1 MKERHRAAGMAIFAARNPSERRIYQEGILDLHGLHVAEATEAVEELLPGIFAGGKVTEVTLITGTGKHSGGVSQHQARLFPAMEAYL 87 MK H A IF +RNP + +Y + ++DLHGLHVAEA E + ++LP + G V + L+TG+G HS G ARL PA+E +L Sbjct: 392 MKNFHFLAASEIFESRNPPNQ-LYMDRMMDLHGLHVAEAVEFLTQMLPKLADEG-VDSIYLVTGSGHHSKG-PDGNARLLPAVERFL 475
BLAST of EWM29956.1 vs. NCBI_GenBank
Match: gi|970633613|gb|KUF79193.1| (NEDD4-binding protein 2 [Phytophthora nicotianae] >gi|970642341|gb|KUF84043.1| NEDD4-binding protein 2 [Phytophthora nicotianae]) HSP 1 Score: 70.4774 bits (171), Expect = 2.064e-11 Identity = 39/87 (44.83%), Postives = 54/87 (62.07%), Query Frame = 0 Query: 1 MKERHRAAGMAIFAARNPSERRIYQEGILDLHGLHVAEATEAVEELLPGIFAGGKVTEVTLITGTGKHSGGVSQHQARLFPAMEAYL 87 MK H A IF +RNP + +Y + ++DLHGLHVAEA E + ++LP + G V + L+TG+G HS G ARL PA+E +L Sbjct: 463 MKNFHFLAASEIFESRNPPNQ-LYMDRMMDLHGLHVAEAVEFLTQMLPKLADEG-VDSIYLVTGSGHHSKG-PDGNARLLPAVERFL 546
BLAST of EWM29956.1 vs. NCBI_GenBank
Match: gi|567945341|gb|ETK71152.1| (hypothetical protein L915_21532 [Phytophthora parasitica] >gi|570935291|gb|ETP00548.1| hypothetical protein F441_22033 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 70.4774 bits (171), Expect = 2.112e-11 Identity = 39/87 (44.83%), Postives = 54/87 (62.07%), Query Frame = 0 Query: 1 MKERHRAAGMAIFAARNPSERRIYQEGILDLHGLHVAEATEAVEELLPGIFAGGKVTEVTLITGTGKHSGGVSQHQARLFPAMEAYL 87 MK H A IF +RNP + +Y + ++DLHGLHVAEA E + ++LP + G V + L+TG+G HS G ARL PA+E +L Sbjct: 475 MKNFHFLAASEIFESRNPPNQ-LYMDRMMDLHGLHVAEAVEFLTQMLPKLADEG-VDSIYLVTGSGHHSKG-PDGNARLLPAVERFL 558 The following BLAST results are available for this feature:
BLAST of EWM29956.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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