EWM23530.1, cds7143 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23530.1 vs. NCBI_GenBank
Match: gi|585104635|gb|EWM23530.1| (adenylosuccinate synthetase [Nannochloropsis gaditana]) HSP 1 Score: 329.331 bits (843), Expect = 4.461e-114 Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0
Query: 1 MYHGLSLSFLLSGEKSHISVSTIVHLLLTETLSSPSLPFFSFLSPFLFSSLLFLSPSYMGGSTLPAEQSPAHVDMKKEEEVNQLLNKIRRVESQSRRVPAPSPSVDVVLGSQWGDEGKGKLVDILSAQYDVVARVAGGLQCRPHHLRRWKEIQATAWSSTSRS 163
MYHGLSLSFLLSGEKSHISVSTIVHLLLTETLSSPSLPFFSFLSPFLFSSLLFLSPSYMGGSTLPAEQSPAHVDMKKEEEVNQLLNKIRRVESQSRRVPAPSPSVDVVLGSQWGDEGKGKLVDILSAQYDVVARVAGGLQCRPHHLRRWKEIQATAWSSTSRS
Sbjct: 1 MYHGLSLSFLLSGEKSHISVSTIVHLLLTETLSSPSLPFFSFLSPFLFSSLLFLSPSYMGGSTLPAEQSPAHVDMKKEEEVNQLLNKIRRVESQSRRVPAPSPSVDVVLGSQWGDEGKGKLVDILSAQYDVVARVAGGLQCRPHHLRRWKEIQATAWSSTSRS 163
BLAST of EWM23530.1 vs. NCBI_GenBank
Match: gi|669165020|ref|XP_008618072.1| (adenylosuccinate synthetase [Saprolegnia diclina VS20] >gi|530730182|gb|EQC28424.1| adenylosuccinate synthetase [Saprolegnia diclina VS20]) HSP 1 Score: 79.337 bits (194), Expect = 2.595e-14 Identity = 40/80 (50.00%), Postives = 53/80 (66.25%), Query Frame = 0
Query: 59 MGGSTLPAEQSPAHVDMKKEEEVNQLLNKIRRVESQSRRVPAPSPSVDVVLGSQWGDEGKGKLVDILSAQYDVVARVAGG 138
MG + L A + P + + ++L+K+ R+ES P VDVVLG+QWGDEGKGKLVD+LS +YDV+ARVAGG
Sbjct: 32 MGPTPLMANEVPLRDTTRGM--LREVLSKLNRIESAVANPKRDGPGVDVVLGAQWGDEGKGKLVDMLSQEYDVIARVAGG 109
BLAST of EWM23530.1 vs. NCBI_GenBank
Match: gi|673036698|ref|XP_008872310.1| (adenylosuccinate synthetase [Aphanomyces invadans] >gi|574471876|gb|ETV98882.1| adenylosuccinate synthetase [Aphanomyces invadans]) HSP 1 Score: 79.337 bits (194), Expect = 3.044e-14 Identity = 39/92 (42.39%), Postives = 55/92 (59.78%), Query Frame = 0
Query: 47 LFSSLLFLSPSYMGGSTLPAEQSPAHVDMKKEEEVNQLLNKIRRVESQSRRVPAPSPSVDVVLGSQWGDEGKGKLVDILSAQYDVVARVAGG 138
+++S+ F S M P + + + ++L+K+ R+ES P VDVVLG+QWGDEGKGKLVD+LS QYD++ RVAGG
Sbjct: 26 MYASMAFESKPLMANEVAPRDTTRGML--------REVLSKLNRIESAVANPKRDGPGVDVVLGAQWGDEGKGKLVDMLSQQYDIIVRVAGG 109
BLAST of EWM23530.1 vs. NCBI_GenBank
Match: gi|698807678|ref|XP_009836868.1| (adenylosuccinate synthetase [Aphanomyces astaci] >gi|574107933|gb|ETV73442.1| adenylosuccinate synthetase [Aphanomyces astaci]) HSP 1 Score: 78.9518 bits (193), Expect = 4.148e-14 Identity = 38/93 (40.86%), Postives = 55/93 (59.14%), Query Frame = 0
Query: 46 FLFSSLLFLSPSYMGGSTLPAEQSPAHVDMKKEEEVNQLLNKIRRVESQSRRVPAPSPSVDVVLGSQWGDEGKGKLVDILSAQYDVVARVAGG 138
+++S+ F S M P + + + ++++K+ R+ES P VDVVLG+QWGDEGKGKLVD+LS QYD++ RVAGG
Sbjct: 25 LMYASMAFESKPLMANEVAPRDTTRGML--------REVISKLNRIESAVANPKREGPGVDVVLGAQWGDEGKGKLVDMLSQQYDIIVRVAGG 109
BLAST of EWM23530.1 vs. NCBI_GenBank
Match: gi|1173934828|gb|OQR86053.1| (adenylosuccinate synthetase [Thraustotheca clavata]) HSP 1 Score: 78.5666 bits (192), Expect = 4.761e-14 Identity = 35/58 (60.34%), Postives = 45/58 (77.59%), Query Frame = 0
Query: 81 VNQLLNKIRRVESQSRRVPAPSPSVDVVLGSQWGDEGKGKLVDILSAQYDVVARVAGG 138
+ ++L+K+ R+ES P VDVVLG+QWGDEGKGKLVD+LS +YDV+ARVAGG
Sbjct: 49 LREVLSKLNRIESAVANPKRDGPGVDVVLGAQWGDEGKGKLVDMLSQEYDVIARVAGG 106
BLAST of EWM23530.1 vs. NCBI_GenBank
Match: gi|813189941|ref|XP_012207570.1| (hypothetical protein SPRG_13184 [Saprolegnia parasitica CBS 223.65] >gi|641527483|gb|KDO21770.1| hypothetical protein SPRG_13184 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 78.1814 bits (191), Expect = 7.583e-14 Identity = 40/80 (50.00%), Postives = 53/80 (66.25%), Query Frame = 0
Query: 59 MGGSTLPAEQSPAHVDMKKEEEVNQLLNKIRRVESQSRRVPAPSPSVDVVLGSQWGDEGKGKLVDILSAQYDVVARVAGG 138
MG + L A + P + + ++L+K+ R+ES P VDVVLG+QWGDEGKGKLVD+LS +YDV+ARVAGG
Sbjct: 7 MGPTPLMANEVPLRDTTRGM--LREVLSKLNRIESAVANPKRDGPGVDVVLGAQWGDEGKGKLVDMLSQEYDVIARVAGG 84
BLAST of EWM23530.1 vs. NCBI_GenBank
Match: gi|1173929247|gb|OQR82514.1| (adenylosuccinate synthetase [Achlya hypogyna]) HSP 1 Score: 77.0258 bits (188), Expect = 1.693e-13 Identity = 34/58 (58.62%), Postives = 45/58 (77.59%), Query Frame = 0
Query: 81 VNQLLNKIRRVESQSRRVPAPSPSVDVVLGSQWGDEGKGKLVDILSAQYDVVARVAGG 138
+ ++L+K+ R+ES P VDVVLG+QWGDEGKGKLVD+LS +YD++ARVAGG
Sbjct: 52 LREVLSKLNRIESAVANPKRDGPGVDVVLGAQWGDEGKGKLVDMLSQEYDIIARVAGG 109
BLAST of EWM23530.1 vs. NCBI_GenBank
Match: gi|635364540|emb|CCI47082.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 74.7146 bits (182), Expect = 1.030e-12 Identity = 37/68 (54.41%), Postives = 48/68 (70.59%), Query Frame = 0
Query: 74 DMKKEEEVNQLLNKIRRVE---SQSRRVPAPSPSVDVVLGSQWGDEGKGKLVDILSAQYDVVARVAGG 138
D +E Q+L ++ R+E + S+R + S VDVVLG+QWGDEGKGKLVD+LS YDV+ RVAGG
Sbjct: 91 DPTMKELWKQVLARLSRIEDAVTNSKRNTSTSACVDVVLGAQWGDEGKGKLVDMLSKSYDVIVRVAGG 158
BLAST of EWM23530.1 vs. NCBI_GenBank
Match: gi|695435253|ref|XP_009531643.1| (hypothetical protein PHYSODRAFT_347173 [Phytophthora sojae] >gi|348674395|gb|EGZ14214.1| hypothetical protein PHYSODRAFT_347173 [Phytophthora sojae]) HSP 1 Score: 70.4774 bits (171), Expect = 3.362e-11 Identity = 39/82 (47.56%), Postives = 48/82 (58.54%), Query Frame = 0
Query: 61 GSTLPAEQSPAHVDMKKEEEVNQLLNKIRRVESQ----SRRVPAPSPSVDVVLGSQWGDEGKGKLVDILSAQYDVVARVAGG 138
G+ P + M KE ++ K+ R+ES RR + VDVVLG+QWGDEGKGKLVD LS YDV+ RVAGG
Sbjct: 80 GAAKPVSREAVTQAMLKE-----VVAKLNRIESAVANPHRRTDGLNAGVDVVLGAQWGDEGKGKLVDSLSQSYDVIVRVAGG 156
BLAST of EWM23530.1 vs. NCBI_GenBank
Match: gi|325186364|emb|CCA20870.1| (unnamed protein product [Albugo laibachii Nc14]) HSP 1 Score: 69.3218 bits (168), Expect = 9.592e-11 Identity = 34/60 (56.67%), Postives = 41/60 (68.33%), Query Frame = 0
Query: 79 EEVNQLLNKIRRVESQSRRVPAPSPSVDVVLGSQWGDEGKGKLVDILSAQYDVVARVAGG 138
+EV LN+I + +R VDVVLG+QWGDEGKGKLVD+LS YDV+ RVAGG
Sbjct: 98 KEVLAKLNRIENAVANPKRNIDNLACVDVVLGAQWGDEGKGKLVDMLSKSYDVIVRVAGG 157 The following BLAST results are available for this feature:
BLAST of EWM23530.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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