EWM29959.1, cds712 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29959.1 vs. NCBI_GenBank
Match: gi|585112554|gb|EWM29959.1| (udp-glucose 4-epimerase [Nannochloropsis gaditana]) HSP 1 Score: 228.409 bits (581), Expect = 7.347e-76 Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0 Query: 1 MVTAMEKASGRKINYVIGERRPGDLDEVYSDPSKAERELGWKATRGLDDMTRDLWRWQQQNPQATAEGAFRLNPGALIAMKGRSWSGWKWLEGGMGLELWYKGMKRYGLLNRV 113 MVTAMEKASGRKINYVIGERRPGDLDEVYSDPSKAERELGWKATRGLDDMTRDLWRWQQQNPQATAEGAFRLNPGALIAMKGRSWSGWKWLEGGMGLELWYKGMKRYGLLNRV Sbjct: 1 MVTAMEKASGRKINYVIGERRPGDLDEVYSDPSKAERELGWKATRGLDDMTRDLWRWQQQNPQATAEGAFRLNPGALIAMKGRSWSGWKWLEGGMGLELWYKGMKRYGLLNRV 113
BLAST of EWM29959.1 vs. NCBI_GenBank
Match: gi|1181343166|ref|WP_084644051.1| (UDP-glucose 4-epimerase GalE [Ferrimonas futtsuensis]) HSP 1 Score: 101.293 bits (251), Expect = 2.051e-23 Identity = 43/62 (69.35%), Postives = 49/62 (79.03%), Query Frame = 0 Query: 1 MVTAMEKASGRKINYVIGERRPGDLDEVYSDPSKAERELGWKATRGLDDMTRDLWRWQQQNP 62 MV A EK SG+ I Y + ERRPGD+ Y+DPSKAERELGWKA RG+D+MTRD WRWQ QNP Sbjct: 274 MVKAFEKGSGQSIPYQLVERRPGDIASCYADPSKAERELGWKAVRGIDEMTRDSWRWQSQNP 335
BLAST of EWM29959.1 vs. NCBI_GenBank
Match: gi|1176059732|ref|XP_020618593.1| (UDP-glucose 4-epimerase-like [Orbicella faveolata] >gi|1176059734|ref|XP_020618601.1| UDP-glucose 4-epimerase-like [Orbicella faveolata]) HSP 1 Score: 97.0561 bits (240), Expect = 9.672e-22 Identity = 42/64 (65.62%), Postives = 49/64 (76.56%), Query Frame = 0 Query: 1 MVTAMEKASGRKINYVIGERRPGDLDEVYSDPSKAERELGWKATRGLDDMTRDLWRWQQQNPQA 64 MV A+EKASG+ + Y I RR GD+D VYSD S AE+ELGWKATRGL++M D WRWQ QNPQ Sbjct: 276 MVKAVEKASGKPVPYKIAPRREGDVDAVYSDASFAEKELGWKATRGLEEMCEDAWRWQLQNPQG 339
BLAST of EWM29959.1 vs. NCBI_GenBank
Match: gi|506359959|ref|WP_015879678.1| (UDP-glucose 4-epimerase [Tolumonas auensis] >gi|237501636|gb|ACQ94229.1| UDP-glucose 4-epimerase [Tolumonas auensis DSM 9187]) HSP 1 Score: 96.6709 bits (239), Expect = 1.122e-21 Identity = 45/67 (67.16%), Postives = 52/67 (77.61%), Query Frame = 0 Query: 1 MVTAMEKASGRKINYVIGERRPGDLDEVYSDPSKAERELGWKATRGLDDMTRDLWRWQQQNPQATAE 67 MV A +ASG KINY + ERRPGD+ E ++DP+KA+RELGWKATR LDDMTRD WRWQQ NP E Sbjct: 271 MVHAFARASGLKINYKLVERRPGDVAECWADPAKAQRELGWKATRTLDDMTRDSWRWQQANPNGYEE 337
BLAST of EWM29959.1 vs. NCBI_GenBank
Match: gi|1002592664|ref|XP_015675135.1| (PREDICTED: UDP-glucose 4-epimerase [Protobothrops mucrosquamatus] >gi|1002592666|ref|XP_015675136.1| PREDICTED: UDP-glucose 4-epimerase [Protobothrops mucrosquamatus]) HSP 1 Score: 96.2857 bits (238), Expect = 1.664e-21 Identity = 43/62 (69.35%), Postives = 47/62 (75.81%), Query Frame = 0 Query: 1 MVTAMEKASGRKINYVIGERRPGDLDEVYSDPSKAERELGWKATRGLDDMTRDLWRWQQQNP 62 MV AMEKASGR+INY I ERR GD+ Y++P AERELGWKA GLD M DLWRWQ QNP Sbjct: 280 MVKAMEKASGRQINYKIVERREGDVASCYANPGLAERELGWKAIFGLDKMCEDLWRWQSQNP 341
BLAST of EWM29959.1 vs. NCBI_GenBank
Match: gi|1179975006|ref|WP_083497360.1| (UDP-glucose 4-epimerase GalE [Bacillus humi]) HSP 1 Score: 96.2857 bits (238), Expect = 1.956e-21 Identity = 42/73 (57.53%), Postives = 51/73 (69.86%), Query Frame = 0 Query: 1 MVTAMEKASGRKINYVIGERRPGDLDEVYSDPSKAERELGWKATRGLDDMTRDLWRWQQQNPQATAEGAFRLN 73 MV A EKASG +I Y+I +RRPGD+ Y++PSKA LGWKATRG+D M +D WRWQQ NP E A + N Sbjct: 271 MVEAFEKASGERIPYIIKDRRPGDVAICYANPSKARNHLGWKATRGIDQMCQDSWRWQQNNPNGYNEQAEKQN 343
BLAST of EWM29959.1 vs. NCBI_GenBank
Match: gi|927114008|ref|XP_013915679.1| (PREDICTED: UDP-glucose 4-epimerase [Thamnophis sirtalis]) HSP 1 Score: 96.2857 bits (238), Expect = 1.985e-21 Identity = 43/62 (69.35%), Postives = 47/62 (75.81%), Query Frame = 0 Query: 1 MVTAMEKASGRKINYVIGERRPGDLDEVYSDPSKAERELGWKATRGLDDMTRDLWRWQQQNP 62 MV AMEKASGR+INY I ERR GD+ Y++P AERELGWKA GLD M DLWRWQ QNP Sbjct: 280 MVKAMEKASGRQINYKIVERREGDVASCYANPGLAERELGWKAIFGLDKMCEDLWRWQAQNP 341
BLAST of EWM29959.1 vs. NCBI_GenBank
Match: gi|602648309|ref|XP_007430572.1| (PREDICTED: UDP-glucose 4-epimerase [Python bivittatus]) HSP 1 Score: 95.9005 bits (237), Expect = 2.392e-21 Identity = 43/62 (69.35%), Postives = 47/62 (75.81%), Query Frame = 0 Query: 1 MVTAMEKASGRKINYVIGERRPGDLDEVYSDPSKAERELGWKATRGLDDMTRDLWRWQQQNP 62 MV AMEKASGR+INY I ERR GD+ Y++P AERELGWKA GLD M DLWRWQ QNP Sbjct: 280 MVKAMEKASGRQINYKIVERREGDVASCYANPGLAERELGWKAIFGLDKMCEDLWRWQSQNP 341
BLAST of EWM29959.1 vs. NCBI_GenBank
Match: gi|1083305999|ref|XP_018602448.1| (PREDICTED: UDP-glucose 4-epimerase [Scleropages formosus] >gi|1083306001|ref|XP_018602449.1| PREDICTED: UDP-glucose 4-epimerase [Scleropages formosus]) HSP 1 Score: 95.5153 bits (236), Expect = 3.450e-21 Identity = 42/62 (67.74%), Postives = 47/62 (75.81%), Query Frame = 0 Query: 1 MVTAMEKASGRKINYVIGERRPGDLDEVYSDPSKAERELGWKATRGLDDMTRDLWRWQQQNP 62 MV AMEKASGRK+ Y IG+RR GD+ Y+DP AERELGWKA GLD M DLWRWQ +NP Sbjct: 280 MVAAMEKASGRKVPYRIGQRRSGDIASCYADPRLAERELGWKAVFGLDKMCEDLWRWQTKNP 341
BLAST of EWM29959.1 vs. NCBI_GenBank
Match: gi|972974628|ref|XP_015204248.1| (PREDICTED: UDP-glucose 4-epimerase isoform X2 [Lepisosteus oculatus]) HSP 1 Score: 95.5153 bits (236), Expect = 3.518e-21 Identity = 42/69 (60.87%), Postives = 50/69 (72.46%), Query Frame = 0 Query: 1 MVTAMEKASGRKINYVIGERRPGDLDEVYSDPSKAERELGWKATRGLDDMTRDLWRWQQQNPQATAEGA 69 MV AMEKASGR+I Y I RR GD+ Y+DP AE+ELGWKA+ GL+ M DLWRWQ QNP ++GA Sbjct: 279 MVKAMEKASGREIQYKIAPRRNGDIASCYADPQLAEKELGWKASFGLEKMCEDLWRWQSQNPTGFSQGA 347 The following BLAST results are available for this feature:
BLAST of EWM29959.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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