EWM23555.1, cds7116 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23555.1 vs. NCBI_GenBank
Match: gi|585104676|gb|EWM23555.1| (flavodoxin family protein [Nannochloropsis gaditana]) HSP 1 Score: 505.368 bits (1300), Expect = 0.000e+0 Identity = 246/246 (100.00%), Postives = 246/246 (100.00%), Query Frame = 0 Query: 1 MAEVDGYVELIGMGKPDLIEIKGVTYCGKSAISTLRMEENVPWHHEVRAFAQAIADRTEGAPGRKRGREGGKERGRDGGMERGREGGAESGLSPWCFLWHRHVLECSGPLSFVFLLISPPTSLAFSPPSSLPPSFPPSLLSLDTGEYEFMAEHAHSCCTLLARKKTFYRGGKWYTWIDYAKFHDLIERFEKDGTEFDASDYCAETPAWALKGAPEEGFDPVDTRFRRNKAGVVEEVPYRPTDSGCG 246 MAEVDGYVELIGMGKPDLIEIKGVTYCGKSAISTLRMEENVPWHHEVRAFAQAIADRTEGAPGRKRGREGGKERGRDGGMERGREGGAESGLSPWCFLWHRHVLECSGPLSFVFLLISPPTSLAFSPPSSLPPSFPPSLLSLDTGEYEFMAEHAHSCCTLLARKKTFYRGGKWYTWIDYAKFHDLIERFEKDGTEFDASDYCAETPAWALKGAPEEGFDPVDTRFRRNKAGVVEEVPYRPTDSGCG Sbjct: 1 MAEVDGYVELIGMGKPDLIEIKGVTYCGKSAISTLRMEENVPWHHEVRAFAQAIADRTEGAPGRKRGREGGKERGRDGGMERGREGGAESGLSPWCFLWHRHVLECSGPLSFVFLLISPPTSLAFSPPSSLPPSFPPSLLSLDTGEYEFMAEHAHSCCTLLARKKTFYRGGKWYTWIDYAKFHDLIERFEKDGTEFDASDYCAETPAWALKGAPEEGFDPVDTRFRRNKAGVVEEVPYRPTDSGCG 246
BLAST of EWM23555.1 vs. NCBI_GenBank
Match: gi|585104675|gb|EWM23554.1| (flavodoxin family protein [Nannochloropsis gaditana]) HSP 1 Score: 220.705 bits (561), Expect = 8.034e-70 Identity = 103/113 (91.15%), Postives = 106/113 (93.81%), Query Frame = 0 Query: 134 SFPPSLLSLDTGEYEFMAEHAHSCCTLLARKKTFYRGGKWYTWIDYAKFHDLIERFEKDGTEFDASDYCAETPAWALKGAPEEGFDPVDTRFRRNKAGVVEEVPYRPTDSGCG 246 +F ++ GEYEFMAEHAHSCCTLLARKKTFYRGGKWYTWIDYAKFHDLIERFEKDGTEFDASDYCAETPAWALKGAPEEGFDPVDTRFRRNKAGVVEEVPYRPTDSGCG Sbjct: 49 AFAQAIADRTEGEYEFMAEHAHSCCTLLARKKTFYRGGKWYTWIDYAKFHDLIERFEKDGTEFDASDYCAETPAWALKGAPEEGFDPVDTRFRRNKAGVVEEVPYRPTDSGCG 161 HSP 2 Score: 124.79 bits (312), Expect = 3.029e-32 Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0 Query: 1 MAEVDGYVELIGMGKPDLIEIKGVTYCGKSAISTLRMEENVPWHHEVRAFAQAIADRTEG 60 MAEVDGYVELIGMGKPDLIEIKGVTYCGKSAISTLRMEENVPWHHEVRAFAQAIADRTEG Sbjct: 1 MAEVDGYVELIGMGKPDLIEIKGVTYCGKSAISTLRMEENVPWHHEVRAFAQAIADRTEG 60
BLAST of EWM23555.1 vs. NCBI_GenBank
Match: gi|1173954857|gb|OQS01994.1| (tRNA wybutosine-synthesizing protein [Thraustotheca clavata]) HSP 1 Score: 131.339 bits (329), Expect = 2.689e-31 Identity = 64/113 (56.64%), Postives = 74/113 (65.49%), Query Frame = 0 Query: 134 SFPPSLLSLDTGEYEFMAEHAHSCCTLLARKKTFYRGGKWYTWIDYAKFHDLIERFEKDGTEFDASDYCAETPAWALKGAPEEGFDPVDTRFRRNKAGVVEEVPYRPTDSGCG 246 SF L S GEY EHAHS C L+A K F G+W+TWIDY KFH L++++ KDGT F DY A TP WA+ APE GFDPV+TRFRR K G V E+ Y TDSGCG Sbjct: 582 SFCELLCSKLDGEYGLATEHAHSNCVLIA-KTQFKIEGQWHTWIDYDKFHQLVQQYYKDGTTFTTMDYIARTPHWAVYDAPEHGFDPVETRFRRTKEGKVVEIEYTATDSGCG 693 HSP 2 Score: 72.4034 bits (176), Expect = 6.149e-11 Identity = 33/63 (52.38%), Postives = 46/63 (73.02%), Query Frame = 0 Query: 1 MAEVDGYVELIGMGKPDLIEIKGVTYCGKSAISTLRMEENVPWHHEVRAFAQAIADRTEGAPG 63 M E+D YVELI +G+PDLIE+K VTYCGKS S L + ++VP+H EVR+F + + + +G G Sbjct: 535 MKEIDNYVELIQIGQPDLIEVKAVTYCGKSDASDLTI-KHVPYHEEVRSFCELLCSKLDGEYG 596
BLAST of EWM23555.1 vs. NCBI_GenBank
Match: gi|698787402|ref|XP_009826733.1| (hypothetical protein H257_04059 [Aphanomyces astaci] >gi|574117822|gb|ETV83303.1| hypothetical protein H257_04059 [Aphanomyces astaci]) HSP 1 Score: 128.642 bits (322), Expect = 2.847e-30 Identity = 61/102 (59.80%), Postives = 70/102 (68.63%), Query Frame = 0 Query: 145 GEYEFMAEHAHSCCTLLARKKTFYRGGKWYTWIDYAKFHDLIERFEKDGTEFDASDYCAETPAWALKGAPEEGFDPVDTRFRRNKAGVVEEVPYRPTDSGCG 246 G YE EHAHS C L+A+ K F G W+TWIDY KFH LI+ + KDGT F DY A TPAWA+ APE GFDP++TRFRR K G V E+ Y TDSGCG Sbjct: 630 GGYELATEHAHSNCVLVAKTK-FKIDGHWHTWIDYDKFHTLIQAYYKDGTPFTTMDYIAPTPAWAVYNAPEAGFDPIETRFRRTKEGKVVEIEYTATDSGCG 730 HSP 2 Score: 72.4034 bits (176), Expect = 6.485e-11 Identity = 35/60 (58.33%), Postives = 43/60 (71.67%), Query Frame = 0 Query: 1 MAEVDGYVELIGMGKPDLIEIKGVTYCGKSAISTLRMEENVPWHHEVRAFAQAIADRTEG 60 M E+D YVELI +G+PDLIEIK VTYCGKS S L M +NVP+H EVR F + + + G Sbjct: 572 MKELDNYVELIHLGEPDLIEIKAVTYCGKSDASDLTM-QNVPYHQEVRDFCELLCAKLGG 630
BLAST of EWM23555.1 vs. NCBI_GenBank
Match: gi|675197091|ref|XP_008907430.1| (hypothetical protein PPTG_13478 [Phytophthora parasitica INRA-310] >gi|566020899|gb|ETI43810.1| hypothetical protein F443_11402 [Phytophthora parasitica P1569] >gi|567958283|gb|ETK83875.1| hypothetical protein L915_11092 [Phytophthora parasitica] >gi|567986975|gb|ETL37290.1| hypothetical protein L916_10990 [Phytophthora parasitica] >gi|568016253|gb|ETL90430.1| hypothetical protein L917_10899 [Phytophthora parasitica] >gi|568046629|gb|ETM43734.1| hypothetical protein L914_10925 [Phytophthora parasitica] >gi|568092245|gb|ETN07054.1| hypothetical protein PPTG_13478 [Phytophthora parasitica INRA-310] >gi|570324538|gb|ETO72486.1| hypothetical protein F444_11472 [Phytophthora parasitica P1976] >gi|570948364|gb|ETP13621.1| hypothetical protein F441_11319 [Phytophthora parasitica CJ01A1] >gi|570981210|gb|ETP41684.1| hypothetical protein F442_11287 [Phytophthora parasitica P10297] >gi|970616723|gb|KUF64869.1| S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase [Phytophthora nicotianae]) HSP 1 Score: 127.872 bits (320), Expect = 4.284e-30 Identity = 61/112 (54.46%), Postives = 77/112 (68.75%), Query Frame = 0 Query: 135 FPPSLLSLDTGEYEFMAEHAHSCCTLLARKKTFYRGGKWYTWIDYAKFHDLIERFEKDGTEFDASDYCAETPAWALKGAPEEGFDPVDTRFRRNKAGVVEEVPYRPTDSGCG 246 F +L +G+Y +EHAHS C L+A+KK F R G W+TWIDY +FH+LI + +DGT F A DY A TP WAL + E+GFDPV+TRFRR K G V E Y+ T+SGCG Sbjct: 599 FCSALCDRVSGDYALASEHAHSNCVLIAKKK-FCRDGVWHTWIDYERFHELIATYYEDGTPFTADDYTAPTPYWALYDSKEQGFDPVETRFRRTKDGKVVEFAYQSTESGCG 709 HSP 2 Score: 78.1814 bits (191), Expect = 6.034e-13 Identity = 36/60 (60.00%), Postives = 42/60 (70.00%), Query Frame = 0 Query: 1 MAEVDGYVELIGMGKPDLIEIKGVTYCGKSAISTLRMEENVPWHHEVRAFAQAIADRTEG 60 M E+D Y ELI +G+PD IE+K VTYCGKS S L M +NVPWH EVR F A+ DR G Sbjct: 551 MEELDNYAELINIGQPDFIEVKAVTYCGKSDGSDLTM-KNVPWHEEVRGFCSALCDRVSG 609
BLAST of EWM23555.1 vs. NCBI_GenBank
Match: gi|325179738|emb|CCA14141.1| (tRNA wybutosinesynthesizing protein putative [Albugo laibachii Nc14]) HSP 1 Score: 127.872 bits (320), Expect = 4.426e-30 Identity = 60/112 (53.57%), Postives = 77/112 (68.75%), Query Frame = 0 Query: 135 FPPSLLSLDTGEYEFMAEHAHSCCTLLARKKTFYRGGKWYTWIDYAKFHDLIERFEKDGTEFDASDYCAETPAWALKGAPEEGFDPVDTRFRRNKAGVVEEVPYRPTDSGCG 246 F +L+ G Y A+HAHS C LLA KKTFY +W+TWIDY KFHDL++R+ DGT F +S+Y + TP+WA APE+GFDP +TRF R K G + E Y+ T+SGCG Sbjct: 624 FCSALVEKTNGIYGLAAQHAHSNCVLLA-KKTFYIDEQWHTWIDYEKFHDLMDRYYTDGTLFSSSEYISLTPSWATFDAPEKGFDPCETRFYRTKNGKIAETSYQSTESGCG 734 HSP 2 Score: 68.5514 bits (166), Expect = 1.133e-9 Identity = 32/63 (50.79%), Postives = 43/63 (68.25%), Query Frame = 0 Query: 1 MAEVDGYVELIGMGKPDLIEIKGVTYCGKSAISTLRMEENVPWHHEVRAFAQAIADRTEGAPG 63 M +++ Y ELI +G+PD IE+K VTYCGKS S L M ++VPWH EV F A+ ++T G G Sbjct: 576 MQDIEKYAELIEIGQPDFIEVKAVTYCGKSDGSDLTM-KHVPWHEEVVDFCSALVEKTNGIYG 637
BLAST of EWM23555.1 vs. NCBI_GenBank
Match: gi|970658684|gb|KUF96422.1| (sulfite oxidase [Phytophthora nicotianae]) HSP 1 Score: 127.872 bits (320), Expect = 4.436e-30 Identity = 61/112 (54.46%), Postives = 77/112 (68.75%), Query Frame = 0 Query: 135 FPPSLLSLDTGEYEFMAEHAHSCCTLLARKKTFYRGGKWYTWIDYAKFHDLIERFEKDGTEFDASDYCAETPAWALKGAPEEGFDPVDTRFRRNKAGVVEEVPYRPTDSGCG 246 F +L +G+Y +EHAHS C L+A+KK F R G W+TWIDY +FH+LI + +DGT F A DY A TP WAL + E+GFDPV+TRFRR K G V E Y+ T+SGCG Sbjct: 539 FCSALCDRVSGDYALASEHAHSNCVLIAKKK-FCRDGVWHTWIDYERFHELIATYYEDGTPFTADDYTAPTPYWALYDSKEQGFDPVETRFRRTKDGKVVEFAYQSTESGCG 649 HSP 2 Score: 78.1814 bits (191), Expect = 6.753e-13 Identity = 36/60 (60.00%), Postives = 42/60 (70.00%), Query Frame = 0 Query: 1 MAEVDGYVELIGMGKPDLIEIKGVTYCGKSAISTLRMEENVPWHHEVRAFAQAIADRTEG 60 M E+D Y ELI +G+PD IE+K VTYCGKS S L M +NVPWH EVR F A+ DR G Sbjct: 491 MEELDNYAELINIGQPDFIEVKAVTYCGKSDGSDLTM-KNVPWHEEVRGFCSALCDRVSG 549
BLAST of EWM23555.1 vs. NCBI_GenBank
Match: gi|953502925|emb|CEG35693.1| (trna wybutosine-synthesizing protein 1 homolog [Plasmopara halstedii]) HSP 1 Score: 127.487 bits (319), Expect = 5.090e-30 Identity = 60/113 (53.10%), Postives = 79/113 (69.91%), Query Frame = 0 Query: 134 SFPPSLLSLDTGEYEFMAEHAHSCCTLLARKKTFYRGGKWYTWIDYAKFHDLIERFEKDGTEFDASDYCAETPAWALKGAPEEGFDPVDTRFRRNKAGVVEEVPYRPTDSGCG 246 SF +L +G+Y +EHAHS C L+A+KK FYR G W+TWIDY +FH+LI ++ +DGT F A +Y A TP WAL + E+GFDP +TRFRR+K G V + Y T+SGCG Sbjct: 544 SFCSALCDRVSGDYALASEHAHSNCVLIAKKK-FYREGVWHTWIDYDRFHELIAKYYEDGTLFTADEYIAPTPHWALYDSKEQGFDPAETRFRRSKDGKVVKFAYLSTESGCG 655 HSP 2 Score: 78.9518 bits (193), Expect = 3.009e-13 Identity = 36/60 (60.00%), Postives = 42/60 (70.00%), Query Frame = 0 Query: 1 MAEVDGYVELIGMGKPDLIEIKGVTYCGKSAISTLRMEENVPWHHEVRAFAQAIADRTEG 60 M E+D Y ELI +G PD IE+K VTYCGKS S L M +NVPWH EVR+F A+ DR G Sbjct: 497 MEELDNYAELINIGHPDFIEVKAVTYCGKSDGSNLTM-QNVPWHEEVRSFCSALCDRVSG 555
BLAST of EWM23555.1 vs. NCBI_GenBank
Match: gi|635360837|emb|CCI50025.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 127.487 bits (319), Expect = 6.199e-30 Identity = 60/112 (53.57%), Postives = 77/112 (68.75%), Query Frame = 0 Query: 135 FPPSLLSLDTGEYEFMAEHAHSCCTLLARKKTFYRGGKWYTWIDYAKFHDLIERFEKDGTEFDASDYCAETPAWALKGAPEEGFDPVDTRFRRNKAGVVEEVPYRPTDSGCG 246 F +L+ G Y A+HAHS C LLA KKTF G+W+TWIDY KFHDL++R+ DGT F +S+Y + TP+WA APE+GFDP +TRF R K G + E Y+ T+SGCG Sbjct: 623 FCTALVEKTNGVYGLAAQHAHSNCVLLA-KKTFCIDGQWHTWIDYEKFHDLMDRYYTDGTMFSSSEYISPTPSWATFDAPEKGFDPCETRFYRTKNGKIAETSYQSTESGCG 733 HSP 2 Score: 68.5514 bits (166), Expect = 1.280e-9 Identity = 32/63 (50.79%), Postives = 43/63 (68.25%), Query Frame = 0 Query: 1 MAEVDGYVELIGMGKPDLIEIKGVTYCGKSAISTLRMEENVPWHHEVRAFAQAIADRTEGAPG 63 M +++ Y ELI +G+PD IE+K VTYCGKS S L M ++VPWH EV F A+ ++T G G Sbjct: 575 MQDIEKYAELIEIGQPDFIEVKAVTYCGKSDGSDLTM-KHVPWHEEVCDFCTALVEKTNGVYG 636
BLAST of EWM23555.1 vs. NCBI_GenBank
Match: gi|1214712839|gb|OWZ23760.1| (TRNA wybutosine-synthesizing protein [Phytophthora megakarya]) HSP 1 Score: 127.487 bits (319), Expect = 6.650e-30 Identity = 59/112 (52.68%), Postives = 78/112 (69.64%), Query Frame = 0 Query: 135 FPPSLLSLDTGEYEFMAEHAHSCCTLLARKKTFYRGGKWYTWIDYAKFHDLIERFEKDGTEFDASDYCAETPAWALKGAPEEGFDPVDTRFRRNKAGVVEEVPYRPTDSGCG 246 F +L +G+Y +EHAHS C L+A+KK F R G W+TWIDY +FH+L+ ++ +DG+ F A DY A TP WAL + E+GFDPV+TRFRR K G V E Y+ T+SGCG Sbjct: 601 FCSALCERVSGDYALASEHAHSNCVLIAKKK-FCRDGVWHTWIDYERFHELVAKYYEDGSTFTADDYTAPTPHWALYDSQEQGFDPVETRFRRTKDGKVVEFAYQSTESGCG 711 HSP 2 Score: 75.8702 bits (185), Expect = 3.586e-12 Identity = 35/60 (58.33%), Postives = 42/60 (70.00%), Query Frame = 0 Query: 1 MAEVDGYVELIGMGKPDLIEIKGVTYCGKSAISTLRMEENVPWHHEVRAFAQAIADRTEG 60 M E+D Y ELI +G+PD IE+K VTYCGKS S L M +NVPWH EVR F A+ +R G Sbjct: 553 MEELDNYAELINIGQPDFIEVKAVTYCGKSDGSDLTM-KNVPWHEEVRGFCSALCERVSG 611 The following BLAST results are available for this feature:
BLAST of EWM23555.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|