EWM23581.1, cds7093 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23581.1 vs. NCBI_GenBank
Match: gi|585104720|gb|EWM23581.1| (cysteine synthase [Nannochloropsis gaditana]) HSP 1 Score: 817.379 bits (2110), Expect = 0.000e+0 Identity = 402/402 (100.00%), Postives = 402/402 (100.00%), Query Frame = 0
Query: 1 MYFFSSRGPGSRRVVEHVLKASACITAAAGVMALTTPYYSAENGKRGTPGSSFYFSSPCRGPARAQGHPAWVHSSEEEEERGTTNDDEKHRRFYRPPYNRSGDKGERGGGGGKRMGHGNLRHGMHSHTDEVVEGFAGTVGNTPLVEIKSLSRITGCRILAKAEHLNPSGSINDRAAVYMVEDAERKGRLRPGGVIVEGTRGNTGISLALASLAKGYQCVLVVPDSVSAVKVDLMRAYGAHVHVQPSVPLSDSRHFYHKAAALAQELREAQAAALQSFQAHHQGLRVEEEEEEEEEAEAEEEEAGVTGSKEGDRAGGVEGAGGRDESVEERREVPSEGWEEGPGPLRLRRHMPKIVHLDQYENLANFKAHFEGTGPEIWRQVGHKIDAFVSGAGTGGTLADDE 402
MYFFSSRGPGSRRVVEHVLKASACITAAAGVMALTTPYYSAENGKRGTPGSSFYFSSPCRGPARAQGHPAWVHSSEEEEERGTTNDDEKHRRFYRPPYNRSGDKGERGGGGGKRMGHGNLRHGMHSHTDEVVEGFAGTVGNTPLVEIKSLSRITGCRILAKAEHLNPSGSINDRAAVYMVEDAERKGRLRPGGVIVEGTRGNTGISLALASLAKGYQCVLVVPDSVSAVKVDLMRAYGAHVHVQPSVPLSDSRHFYHKAAALAQELREAQAAALQSFQAHHQGLRVEEEEEEEEEAEAEEEEAGVTGSKEGDRAGGVEGAGGRDESVEERREVPSEGWEEGPGPLRLRRHMPKIVHLDQYENLANFKAHFEGTGPEIWRQVGHKIDAFVSGAGTGGTLADDE
Sbjct: 1 MYFFSSRGPGSRRVVEHVLKASACITAAAGVMALTTPYYSAENGKRGTPGSSFYFSSPCRGPARAQGHPAWVHSSEEEEERGTTNDDEKHRRFYRPPYNRSGDKGERGGGGGKRMGHGNLRHGMHSHTDEVVEGFAGTVGNTPLVEIKSLSRITGCRILAKAEHLNPSGSINDRAAVYMVEDAERKGRLRPGGVIVEGTRGNTGISLALASLAKGYQCVLVVPDSVSAVKVDLMRAYGAHVHVQPSVPLSDSRHFYHKAAALAQELREAQAAALQSFQAHHQGLRVEEEEEEEEEAEAEEEEAGVTGSKEGDRAGGVEGAGGRDESVEERREVPSEGWEEGPGPLRLRRHMPKIVHLDQYENLANFKAHFEGTGPEIWRQVGHKIDAFVSGAGTGGTLADDE 402
BLAST of EWM23581.1 vs. NCBI_GenBank
Match: gi|813195977|ref|XP_012208518.1| (hypothetical protein SPRG_13532 [Saprolegnia parasitica CBS 223.65] >gi|641526413|gb|KDO20780.1| hypothetical protein SPRG_13532 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 174.866 bits (442), Expect = 5.623e-48 Identity = 87/162 (53.70%), Postives = 110/162 (67.90%), Query Frame = 0
Query: 126 SHTDEVVEGFAGTVGNTPLVEIKSLSRITGCRILAKAEHLNPSGSINDRAAVYMVEDAERKGRLRPGGVIVEGTRGNTGISLALASLAKGYQCVLVVPDSVSAVKVDLMRAYGAHVHVQPSVPLSDSRHFYHKAAALAQE-----LREAQAAALQSFQAHHQ 282
S +DEVV G +GNTPL+EI SLS++TGCRILAKAE LNPSGS+ DRAA Y++E AE+ G L PGG +VE T GNTG+ LAL + AKGY+ V +P S K+ LM+A+GA HVQP VPLSD HFYH A + + Q + +FQAH++
Sbjct: 38 STSDEVVT-ILGAIGNTPLLEIPSLSKLTGCRILAKAEFLNPSGSVKDRAAKYLIESAEKSGDLPPGGTVVEATGGNTGLGLALVAAAKGYKAVFTMPAVTSTEKIALMQAFGATTHVQPGVPLSDPNHFYHLAKRIIADNPTTHFGPDQFENMANFQAHYE 198
BLAST of EWM23581.1 vs. NCBI_GenBank
Match: gi|955490682|ref|XP_014656449.1| (PALP-domain-containing protein [Moesziomyces antarcticus] >gi|674219186|dbj|GAK65245.1| PALP-domain-containing protein [Moesziomyces antarcticus]) HSP 1 Score: 179.874 bits (455), Expect = 1.126e-47 Identity = 113/278 (40.65%), Postives = 148/278 (53.24%), Query Frame = 0
Query: 124 MHSHTDEVVEGFAGTVGNTPLVEIKSLSRITGCRILAKAEHLNPSGSINDRAAVYMVEDAERKGRLRP--GGVIVEGTRGNTGISLALASLAKGYQCVLVVPDSVSAVKVDLMRAYGAHVHVQPSVPLSDSRHFYHKAAALAQELREAQAAALQSFQAHHQGLRVEEEEEEEEEAEAEEEEAGVTGSKEGDRAGGVEGAGGRDESVEERREVPSEGWEEGPGPLRLRRHMPKIVHLDQYENLANFKAHFEGTGPEIWRQVGHKIDAFVSGAGTGGTLA 399
+ + +VV G G +GNTPL+ I SLS TGC IL KAE LNP+GS DR A+ ++ DAE +G L P G I EGT G+TGISLA + AKGY+C +V+PD V+ KV+L+ GA + + D RHF ++A A A+ + + H G G +G D G E D V RR G + P + + P+ DQ+EN +NF AH+ GTGPEIWRQ G IDAFV+GAGTGGTL+
Sbjct: 96 IQIRSGQVVRGVEGLIGNTPLMRINSLSDATGCEILGKAEFLNPAGSPKDRVALQILRDAEDEGLLYPHTGSCIFEGTVGSTGISLATLARAKGYRCSIVIPDDVAREKVELLTKLGAEIQSVRPRGIVDPRHFVNEARARAEAFGDVELIG-----PHPTGF-------------------GSSGQAGSDGGQGEEYVHRDDLVVSSRRPA---GDVDADAPEMVSENQPRGFFADQFENPSNFWAHYNGTGPEIWRQTGGLIDAFVAGAGTGGTLS 346
BLAST of EWM23581.1 vs. NCBI_GenBank
Match: gi|443894697|dbj|GAC72044.1| (cysteine synthase [Moesziomyces antarcticus T-34]) HSP 1 Score: 179.489 bits (454), Expect = 1.302e-47 Identity = 113/278 (40.65%), Postives = 148/278 (53.24%), Query Frame = 0
Query: 124 MHSHTDEVVEGFAGTVGNTPLVEIKSLSRITGCRILAKAEHLNPSGSINDRAAVYMVEDAERKGRLRP--GGVIVEGTRGNTGISLALASLAKGYQCVLVVPDSVSAVKVDLMRAYGAHVHVQPSVPLSDSRHFYHKAAALAQELREAQAAALQSFQAHHQGLRVEEEEEEEEEAEAEEEEAGVTGSKEGDRAGGVEGAGGRDESVEERREVPSEGWEEGPGPLRLRRHMPKIVHLDQYENLANFKAHFEGTGPEIWRQVGHKIDAFVSGAGTGGTLA 399
+ + +VV G G +GNTPL+ I SLS TGC IL KAE LNP+GS DR A+ ++ DAE +G L P G I EGT G+TGISLA + AKGY+C +V+PD V+ KV+L+ GA + + D RHF ++A A A+ + + H G G +G D G E D V RR G + P + + P+ DQ+EN +NF AH+ GTGPEIWRQ G IDAFV+GAGTGGTL+
Sbjct: 96 IQIRSGQVVRGVEGLIGNTPLMRINSLSDATGCEILGKAEFLNPAGSPKDRVALQILRDAEDEGLLYPHTGSCIFEGTVGSTGISLATLARAKGYRCSIVIPDDVAREKVELLTKLGAEIQSVRPRGIVDPRHFVNEARARAEAFGDVELIG-----PHPTGF-------------------GTSGYAGSDGGQGEEYVHRDDLVVSSRRPA---GDVDADAPEMVSENQPRGFFADQFENPSNFWAHYNGTGPEIWRQTGGLIDAFVAGAGTGGTLS 346
BLAST of EWM23581.1 vs. NCBI_GenBank
Match: gi|573026258|gb|ETS59515.1| (hypothetical protein PaG_06434 [Moesziomyces aphidis DSM 70725]) HSP 1 Score: 179.104 bits (453), Expect = 2.226e-47 Identity = 113/278 (40.65%), Postives = 148/278 (53.24%), Query Frame = 0
Query: 124 MHSHTDEVVEGFAGTVGNTPLVEIKSLSRITGCRILAKAEHLNPSGSINDRAAVYMVEDAERKGRLRP--GGVIVEGTRGNTGISLALASLAKGYQCVLVVPDSVSAVKVDLMRAYGAHVHVQPSVPLSDSRHFYHKAAALAQELREAQAAALQSFQAHHQGLRVEEEEEEEEEAEAEEEEAGVTGSKEGDRAGGVEGAGGRDESVEERREVPSEGWEEGPGPLRLRRHMPKIVHLDQYENLANFKAHFEGTGPEIWRQVGHKIDAFVSGAGTGGTLA 399
+ + +VV G G +GNTPL+ I SLS TGC IL KAE LNP+GS DR A+ ++ DAE +G L P G I EGT G+TGISLA + AKGY+C +V+PD V+ KV+L+ GA + + D RHF ++A A A+ + + H G G +G D G E D V RR G + P + + P+ DQ+EN +NF AH+ GTGPEIWRQ G IDAFV+GAGTGGTL+
Sbjct: 96 IQIRSGQVVRGVEGLIGNTPLMRINSLSDATGCEILGKAEFLNPAGSPKDRVALQILCDAEDEGLLYPHTGSCIFEGTVGSTGISLATLARAKGYRCSIVIPDDVAREKVELLTKLGAEIQSVRPRGIVDPRHFVNEARARAEAFGDVELIG-----PHPTGF-------------------GTSGYAGSDGGQGEEYVHRDDLVVSSRRPA---GDVDADAPEMVSENQPRGFFADQFENPSNFWAHYNGTGPEIWRQTGGLIDAFVAGAGTGGTLS 346
BLAST of EWM23581.1 vs. NCBI_GenBank
Match: gi|858057516|emb|CDW97112.1| (hypothetical protein [Sporisorium scitamineum] >gi|1003336522|emb|CDU25953.1| related to cysteine synthase [Sporisorium scitamineum]) HSP 1 Score: 179.104 bits (453), Expect = 2.234e-47 Identity = 112/278 (40.29%), Postives = 150/278 (53.96%), Query Frame = 0
Query: 124 MHSHTDEVVEGFAGTVGNTPLVEIKSLSRITGCRILAKAEHLNPSGSINDRAAVYMVEDAERKGRLRP--GGVIVEGTRGNTGISLALASLAKGYQCVLVVPDSVSAVKVDLMRAYGAHVHVQPSVPLSDSRHFYHKAAALAQELREAQAAALQSFQAHHQGLRVEEEEEEEEEAEAEEEEAGVTGSKEGDRAGGVEGAGGRDESVEERREVPSEGWEEGPGPLRLRRHMPKIVHLDQYENLANFKAHFEGTGPEIWRQVGHKIDAFVSGAGTGGTLA 399
+ + +VV G G +GNTPL+ I SLS TGC IL KAE LNP+GS DR A+ +++DAE +G L P G I EGT G+TGISLA + AKGY+C +V+PD V+ KV+L++ GA + + D RHF ++A A A+ + + H G G +G DR G E D V +R W G + + + + DQ+EN +NF AH+ GTGPEIWRQ G IDAFV+GAGTGGTL+
Sbjct: 98 IQIRSGQVVSGVEGLIGNTPLMRINSLSDATGCEILGKAEFLNPAGSPKDRVALQILKDAEEEGLLYPHTGSCIFEGTVGSTGISLATLARAKGYRCSIVIPDDVAREKVELLQKLGAEIQSVRPRAIVDPRHFVNEARARAEAFGDVELVG-----PHPTGF-------------------GGSGYAGADRGQGEEYVHREDLVVSCKR----SSWRGAEGEV-INENQARGFFADQFENPSNFWAHYNGTGPEIWRQTGGLIDAFVAGAGTGGTLS 346
BLAST of EWM23581.1 vs. NCBI_GenBank
Match: gi|630967442|ref|XP_007880129.1| (hypothetical protein PFL1_04413 [Anthracocystis flocculosa PF-1] >gi|521584349|gb|EPQ28086.1| hypothetical protein PFL1_04413 [Anthracocystis flocculosa PF-1]) HSP 1 Score: 177.948 bits (450), Expect = 4.149e-47 Identity = 113/286 (39.51%), Postives = 158/286 (55.24%), Query Frame = 0
Query: 121 RHGMHSHTDEVVEGFAGTVGNTPLVEIKSLSRITGCRILAKAEHLNPSGSINDRAAVYMVEDAERKGRLRP--GGVIVEGTRGNTGISLALASLAKGYQCVLVVPDSVSAVKVDLMRAYGAHVHVQPSVPLSDSRHFYHKAAALAQ-----ELREAQAAALQSFQAHHQGLRVEEEEEEEEEAEAEEEEAGVTGSKEGDRAGGVEGAGGRDESVEERREVPSEGWEEGPGPLRLRRHMPKIVHLDQYENLANFKAHFEGTGPEIWRQVGHKIDAFVSGAGTGGTLA 399
R + + +VV G G +GNTPL+ I SLS +TGC IL KAE LNP+GS DR A+ ++ DAE +G L P G I EGT G+TGISLA + AKGY+C +V+PD V+ KV+++R GA + + D RHF ++A A A+ EL A AL + +H + E +E + + + + S + R G+D+ +E+R P+ DQ+EN +NF AH+ TGPEIWRQ G +DAFV+GAGTGGTL+
Sbjct: 80 RDSIQIRSGQVVRGIEGLIGNTPLMRINSLSDLTGCEILGKAEFLNPAGSPKDRVALQILNDAEEEGLLHPNTGSCIFEGTVGSTGISLATLARAKGYRCSIVIPDDVAREKVEVLRKLGAEIESVRPRGIVDPRHFVNEARARAEAFGDVELVGPHADALGA--GYH--FKSESGDEGGQGVGDDIHRSDLVVSSKSTR------IDGQDDELEKR---------------------PRGFFADQFENPSNFWAHYSNTGPEIWRQTGGLLDAFVAGAGTGGTLS 334
BLAST of EWM23581.1 vs. NCBI_GenBank
Match: gi|758977017|ref|XP_011388560.1| (hypothetical protein UMAG_02218 [Ustilago maydis 521] >gi|757947220|gb|KIS69687.1| hypothetical protein UMAG_02218 [Ustilago maydis 521]) HSP 1 Score: 177.563 bits (449), Expect = 8.213e-47 Identity = 114/278 (41.01%), Postives = 148/278 (53.24%), Query Frame = 0
Query: 124 MHSHTDEVVEGFAGTVGNTPLVEIKSLSRITGCRILAKAEHLNPSGSINDRAAVYMVEDAERKGRLRP--GGVIVEGTRGNTGISLALASLAKGYQCVLVVPDSVSAVKVDLMRAYGAHVHVQPSVPLSDSRHFYHKAAALAQELREAQAAALQSFQAHHQGLRVEEEEEEEEEAEAEEEEAGVTGSKEGDRAGGVEGAGGRDESVEERREVPSEGWEEGPGPLRLRRHMPKIVHLDQYENLANFKAHFEGTGPEIWRQVGHKIDAFVSGAGTGGTLA 399
+ + +VV G G +GNTPL+ I SLS TGC IL KAE LNP+GS DR A+ +++DAE +G L P G I EGT G+TGISLA + AKGY+C +V+PD V+ KV+L+ GA + + D RHF ++A A A+ E + H GL T G AG E R + V R VP+ G + + DQ+EN +NF AH+ GTGPEIWRQ G IDAFV+GAGTGGTL+
Sbjct: 100 IQIRSGQVVSGVEGLIGNTPLMRINSLSEATGCEILGKAEFLNPAGSPKDRVALQILKDAEEEGLLYPHTGSCIFEGTVGSTGISLATLARAKGYRCSIVIPDDVAREKVELLEKLGAEIESVRPRGIVDPRHFVNEARARAEAFGEVELVG-----PHPNGLG--------------------TSRYAGSDAGQGEEYVHRHDLVVSSRRVPNTDDASGI----VNETQARGFFADQFENPSNFWAHYNGTGPEIWRQTGGLIDAFVAGAGTGGTLS 348
BLAST of EWM23581.1 vs. NCBI_GenBank
Match: gi|669153216|ref|XP_008612170.1| (hypothetical protein SDRG_08081 [Saprolegnia diclina VS20] >gi|530736066|gb|EQC34308.1| hypothetical protein SDRG_08081 [Saprolegnia diclina VS20]) HSP 1 Score: 174.096 bits (440), Expect = 8.516e-47 Identity = 91/172 (52.91%), Postives = 114/172 (66.28%), Query Frame = 0
Query: 120 LRHGMHSHTDEVVEGFAGTVGNTPLVEIKSLSRITGCRILAKAEHLNPSGSINDRAAVYMVEDAERKGRLRPGGVIVEGTRGNTGISLALASLAKGYQCVLVVPDSVSAVKVDLMRAYGAHVHVQPSVPLSDSRHFYHKAAALAQELREA---------QAAALQSFQAHHQ 282
LR S +DEVV G +GNTPL+EI SLS++TGCRILAKAE LNPSGS+ DRAA Y++E AE+ G L PGG +VE T GNTG+ LAL + AKGY+ V +P S K+ LM+A+GA HVQP VPLSD HFYH LA+ + A Q + +FQAH++
Sbjct: 32 LRSTPASTSDEVVT-ILGAIGNTPLLEIPSLSKLTGCRILAKAEFLNPSGSVKDRAAKYLIESAEKSGDLPPGGTVVEATGGNTGLGLALVAAAKGYKAVFTMPAVTSTEKIALMQAFGATTHVQPGVPLSDPNHFYH----LAKRIIAANPTTHFGPDQFENIANFQAHYE 198
BLAST of EWM23581.1 vs. NCBI_GenBank
Match: gi|808364999|ref|XP_012188054.1| (hypothetical protein PHSY_002039 [Pseudozyma hubeiensis SY62] >gi|501305215|dbj|GAC94467.1| hypothetical protein PHSY_002039 [Pseudozyma hubeiensis SY62]) HSP 1 Score: 175.252 bits (443), Expect = 6.542e-46 Identity = 111/272 (40.81%), Postives = 144/272 (52.94%), Query Frame = 0
Query: 130 EVVEGFAGTVGNTPLVEIKSLSRITGCRILAKAEHLNPSGSINDRAAVYMVEDAERKGRLRP--GGVIVEGTRGNTGISLALASLAKGYQCVLVVPDSVSAVKVDLMRAYGAHVHVQPSVPLSDSRHFYHKAAALAQELREAQAAALQSFQAHHQGLRVEEEEEEEEEAEAEEEEAGVTGSKEGDRAGGVEGAGGRDESVEERREVPSEGWEEGPGPLRLRRHMPKIVHLDQYENLANFKAHFEGTGPEIWRQVGHKIDAFVSGAGTGGTLA 399
+VV G G +GNTPL+ I SLS TGC IL KAE LNP+GS DR A+ +++DAE +G L P G I EGT G+TGISLA + AKGY+C +V+PD V+ KV+L+ GA + + D RHF ++A + A+ E E E G +G D G E D V RR ++ P + + DQ+EN +NF AH+ GTGPEIWRQ G IDAFV+GAGTGGTL+
Sbjct: 106 QVVSGVEGLIGNTPLMRINSLSDATGCEILGKAEFLNPAGSPKDRVALQILKDAEDEGLLYPHTGSCIFEGTVGSTGISLATLARAKGYRCSIVIPDDVAREKVELLEKLGAEIQSVRPRGIVDPRHFVNEARSRAEAFGEV------------------------ELVGPHPTEFGASGYAGSDGGQGEEYVHRDDLVVSTRRSRNTDD----PAADVVNESQARGFFADQFENPSNFWAHYNGTGPEIWRQTGGLIDAFVAGAGTGGTLS 349 The following BLAST results are available for this feature:
BLAST of EWM23581.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|