EWM23584.1, cds7090 (CDS) Nannochloropsis gaditana

Overview
NameEWM23584.1
Unique Namecds7090
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002470.1:466662..467348 +
Alignment locationCM002470.1:467509..467697 +
Alignment locationCM002470.1:467884..468028 +
Alignment locationCM002470.1:468182..468294 +
Alignment locationCM002470.1:468469..468549 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23584.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100266g4.7304.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:466662..467348 +
CM002470.1supercontigCM002470.1:467509..467697 +
CM002470.1supercontigCM002470.1:467884..468028 +
CM002470.1supercontigCM002470.1:468182..468294 +
CM002470.1supercontigCM002470.1:468469..468549 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM23584.1 vs. NCBI_GenBank
Match: gi|585104723|gb|EWM23584.1| (hypothetical protein Naga_100266g4 [Nannochloropsis gaditana])

HSP 1 Score: 823.928 bits (2127), Expect = 0.000e+0
Identity = 404/404 (100.00%), Postives = 404/404 (100.00%), Query Frame = 0
Query:    1 MGQTASSPAGTATMNSQPPGISSKASTLAISSPPASDKVQAAPTSSGNLSAQASTARLAALSTSASATAGEDPQNMSLIRRLSISADETTSKMSRKLSSMAEEGRQALRRNNTVVSMASTGVHVITDAGIHLPHELHVPNIGLSHPANATLGAITAAVVAGSLVSPMITVLDLAIVRSQFDHIGVGTAVKRTASDLYTGRASWNPALRIMGGVYLSTYMAANGTEAWCTENGIDYKIPTAVTTSLVNIVGVSLKDRAFARMMKKSASSFPLSSYLLFGIRDGMTVTSTFVLKNTVRDHLVEDLSFRPRYADIAASFAVPMLAQIPFTPLHILAMDLYVRKDATWLSRLQEIKSGYRNVLLGRVMRIVPAFGVGGVVNDMVKEAFEDEEEAMFLHMDRGPPVSKR 404
            MGQTASSPAGTATMNSQPPGISSKASTLAISSPPASDKVQAAPTSSGNLSAQASTARLAALSTSASATAGEDPQNMSLIRRLSISADETTSKMSRKLSSMAEEGRQALRRNNTVVSMASTGVHVITDAGIHLPHELHVPNIGLSHPANATLGAITAAVVAGSLVSPMITVLDLAIVRSQFDHIGVGTAVKRTASDLYTGRASWNPALRIMGGVYLSTYMAANGTEAWCTENGIDYKIPTAVTTSLVNIVGVSLKDRAFARMMKKSASSFPLSSYLLFGIRDGMTVTSTFVLKNTVRDHLVEDLSFRPRYADIAASFAVPMLAQIPFTPLHILAMDLYVRKDATWLSRLQEIKSGYRNVLLGRVMRIVPAFGVGGVVNDMVKEAFEDEEEAMFLHMDRGPPVSKR
Sbjct:    1 MGQTASSPAGTATMNSQPPGISSKASTLAISSPPASDKVQAAPTSSGNLSAQASTARLAALSTSASATAGEDPQNMSLIRRLSISADETTSKMSRKLSSMAEEGRQALRRNNTVVSMASTGVHVITDAGIHLPHELHVPNIGLSHPANATLGAITAAVVAGSLVSPMITVLDLAIVRSQFDHIGVGTAVKRTASDLYTGRASWNPALRIMGGVYLSTYMAANGTEAWCTENGIDYKIPTAVTTSLVNIVGVSLKDRAFARMMKKSASSFPLSSYLLFGIRDGMTVTSTFVLKNTVRDHLVEDLSFRPRYADIAASFAVPMLAQIPFTPLHILAMDLYVRKDATWLSRLQEIKSGYRNVLLGRVMRIVPAFGVGGVVNDMVKEAFEDEEEAMFLHMDRGPPVSKR 404          
BLAST of EWM23584.1 vs. NCBI_GenBank
Match: gi|585104721|gb|EWM23582.1| (hypothetical protein Naga_100266g6 [Nannochloropsis gaditana])

HSP 1 Score: 290.041 bits (741), Expect = 1.147e-92
Identity = 138/249 (55.42%), Postives = 181/249 (72.69%), Query Frame = 0
Query:  144 SHPAN----ATLGAITAAVVAGSLVSPMITVLDLAIVRSQFDHIGVGTAVKRTASDLYTGRASWNPALRIMGGVYLSTYMAANGTEAWCTENGIDYKIPTAVTTSLVNIVGVSLKDRAFARMMKKSASSFPLSSYLLFGIRDGMTVTSTFVLKNTVRDHLVEDLSFRPRYADIAASFAVPMLAQIPFTPLHILAMDLYVRKDATWLSRLQEIKSGYRNVLLGRVMRIVPAFGVGGVVNDMVKEAFEDEE 388
            +HP N      LG   AAV+A S+VSP +TV+DL+I+R+QF+   +G+A++ T SDL +GR  WNPAL IM  VY STY+ AN T A C E GIDYKIPTAV TSLVNI  ++ KDR FARM  K+ + FPLS Y LF +RDG+TVTS+FVLKNT+++ L  +       AD+AASFAVPM+AQ+  TPLHIL++D+Y   ++ +  R++EI  GY +V  GRV+RI+PAFGVGG +ND VKE+FE+ E
Sbjct:   40 THPQNRMAQVALGQTAAAVIASSVVSPAMTVIDLSIIRAQFNKSSMGSALRSTTSDLLSGRMRWNPALSIMSTVYTSTYLTANYTSALCQELGIDYKIPTAVATSLVNITAIAYKDREFARMCSKAPTVFPLSCYGLFALRDGLTVTSSFVLKNTIKERLEAEHGLSHNNADLAASFAVPMIAQLASTPLHILSLDIYSHPESPFRMRMKEIAKGYMSVCSGRVLRIIPAFGVGGYLNDQVKESFEERE 288          
BLAST of EWM23584.1 vs. NCBI_GenBank
Match: gi|552927784|gb|ESA11675.1| (hypothetical protein GLOINDRAFT_79841 [Rhizophagus irregularis DAOM 181602] >gi|595492316|gb|EXX75625.1| hypothetical protein RirG_040340 [Rhizophagus irregularis DAOM 197198w])

HSP 1 Score: 124.79 bits (312), Expect = 1.767e-29
Identity = 80/233 (34.33%), Postives = 119/233 (51.07%), Query Frame = 0
Query:  154 ITAAVVAGSLVSPMITVLDLAIVRSQFDHIGVGTAVKRTASDLYT--GRASWNPALRIMGGVYLSTYMAANGTEAWCTENGIDYKIPTAVTTSLVNIVGVSLKDRAFARMMKKSA-SSFPLSSYLLFGIRDGMTVTSTFVLKNTVRDHLVE-DLSFRPRYADIAASFAVPMLAQIPFTPLHILAMDLYVRKDATWLSRLQEIKSGYRNVLLGRVMRIVPAFGVGGVVNDMVKE 382
            + AA  A  +VSP IT++D +I+ +      +GTA+K    +L T   R    P+  ++ GVY STY  AN  +  C     D + P  + T++ N+     KDRAF RM    A    PL+SY +F  RD +T+ ++F + +TV     +  L      A  AA    P + Q+   PLH+  +D Y R   ++ SR   I   Y    L R++RI PAFG+GG+ N +VKE
Sbjct:   18 LIAAASASFMVSPFITIVDRSIIENTSGRNKLGTALKNGFINLLTRPHRLIRAPSFLLVFGVYFSTYATANTIDTICERLEKDSQTPKFLGTTIANMTTCIFKDRAFTRMFGMVAPKGLPLASYGMFVARDALTIGASFNMPDTVAAEFQKRGLILNDEKAINAAQILCPAVVQLVSCPLHLFGLDYYNRPHVSFASRAGFISKLYIKTTLTRIVRIAPAFGIGGIGNRIVKE 250          
BLAST of EWM23584.1 vs. NCBI_GenBank
Match: gi|929750848|ref|XP_014150407.1| (hypothetical protein SARC_10996 [Sphaeroforma arctica JP610] >gi|906943190|gb|KNC76505.1| hypothetical protein SARC_10996 [Sphaeroforma arctica JP610])

HSP 1 Score: 123.635 bits (309), Expect = 5.496e-29
Identity = 80/233 (34.33%), Postives = 121/233 (51.93%), Query Frame = 0
Query:  154 ITAAVVAGSLVSPMITVLDLAIVRSQFDHIGVGTAVKRTASDLYTGRASWNPAL--RIMGGVYLSTYMAANGTEAWCTENGIDYKIPTAVTTSLVNIVGVSLKDRAFARMMKKSA-SSFPLSSYLLFGIRDGMTVTSTFVLKNTVRDHLVEDLSFRPRYADIAASFAVPMLAQIPFTPLHILAMDLYVRKDATWLSRLQEIKSGYRNVLLGRVMRIVPAFGVGGVVNDMVKEA 383
            + AA+ A   VSP+IT++D +I+ +      +G+A+      L     S+   L  R++ G+Y +TY+ AN  +     N  D  +P  V T+ VN      KDRAF RM    A +S P+ SY LF +RD  T+ ++F L   V DH+ ++  +  + A  AA    PM  Q+  TP+H+L +DLY  K AT   R   +   Y      R+ RI PAFG+GG+ N   +E+
Sbjct:   30 VGAALAAAFCVSPIITIVDRSIIMNASGAQKLGSALVGGVKQLTFTPTSFIRGLDFRLIWGLYTATYVVANVVDTVSELNKKDSAMPKFVVTTAVNGSLCIAKDRAFTRMFGTIAPTSLPIGSYGLFAVRDMATIGASFSLPVKVADHMHDEYGYDRKRALFAAQLLCPMAVQLVSTPMHLLGLDLYNNKTATTSQRASFVGREYLKSTAARISRIAPAFGIGGISNRHFRES 262          
BLAST of EWM23584.1 vs. NCBI_GenBank
Match: gi|1043306945|gb|OBZ91552.1| (hypothetical protein A0J61_00366 [Choanephora cucurbitarum])

HSP 1 Score: 122.479 bits (306), Expect = 1.365e-28
Identity = 83/243 (34.16%), Postives = 125/243 (51.44%), Query Frame = 0
Query:  154 ITAAVVAGSLVSPMITVLDLAIV------RSQFDHIGVGTAVKRTASDLYTGRASWNPALRIMGGVYLSTYMAANGTEAWCTENGID------YKIPTAVTTSLVNIVGVSLKDRAFARMMKKSAS-SFPLSSYLLFGIRDGMTVTSTFVLKNTVRDHLVEDLSFRP--RYADIAASFAVPMLAQIPFTPLHILAMDLYVRKDATWLSRLQEIKSGYRNVLLGRVMRIVPAFGVGGVVNDMVK 381
            + +A  + ++V+P I ++D +I+      R   D +  G     +    +T     +P  RI+ G+Y STY  AN  E  C +  ID      YK    +TTS+ NI     KD+ FAR+   SAS + P  SYLLF  RD +T+ ++F     +   L++  SF+P  + A+  A  + P + QI  TP+H+L +DLY R   +  SR Q I+  Y    L R+ RI PAFG+GGV N   +
Sbjct:   26 LMSAFSSAAMVAPFIAIVDRSIIENLNGKRKLTDGLKYGMRTFLSQPFQFT----MSPQFRIVLGLYFSTYTTANMVETTCEQYSIDPAKTQLYKF---ITTSITNIGLCVYKDKVFARLFGVSASRALPKLSYLLFAARDSLTIAASFTAPAYIAS-LLQQTSFQPSLKTANTLAQLSCPAVVQIVSTPVHLLGLDLYNRPGVSLASRNQLIRKEYVKSTLARIGRIGPAFGIGGVGNTYFR 260          
BLAST of EWM23584.1 vs. NCBI_GenBank
Match: gi|813189501|ref|XP_012207551.1| (hypothetical protein SPRG_13165 [Saprolegnia parasitica CBS 223.65] >gi|641527462|gb|KDO21749.1| hypothetical protein SPRG_13165 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 122.094 bits (305), Expect = 1.572e-28
Identity = 75/232 (32.33%), Postives = 117/232 (50.43%), Query Frame = 0
Query:  154 ITAAVVAGSLVSPMITVLDLAIVRSQFDHIGVGTAVKRTASDLYTGRASW--NPALRIMGGVYLSTYMAANGTEAWCTENGIDYKIPTAVTTSLVNIVGVSLKDRAFARMMKKSA-SSFPLSSYLLFGIRDGMTVTSTFVLKNTVRDHLVEDLSFRPRYADIAASFAVPMLAQIPFTPLHILAMDLYVRKDATWLSRLQEIKSGYRNVLLGRVMRIVPAFGVGGVVNDMVKE 382
            + AA +A   V+P IT +D A++ +      +  A+   + D       +       ++ GVY +TY++ANG +  C    +D  +P  ++T+ VN+    +KDR F RM    A + FPL S  LF IRD +TV ++F+    +     ++L   PR ++  A    PML Q   TPLH+L++DLY  K      R+  I   Y      RV R+VPAFG GG+ N   ++
Sbjct:   28 LAAAGLASFFVAPFITTVDRAVIENAAGARPLKKALIEISKDCIRNPLQFIRRKEFLLIYGVYTATYLSANGVDTLCETAEVDSNMPKFLSTTAVNMGACIIKDREFTRMFGVIAPTKFPLMSMGLFAIRDSLTVGASFIAPPILSAKF-QELGQTPRTSNTLAQLTCPMLVQFLSTPLHLLSLDLYNNKGVAMGDRMSFISREYLKSTTARVARVVPAFGFGGIGNKYFRD 258          
BLAST of EWM23584.1 vs. NCBI_GenBank
Match: gi|1173929757|gb|OQR82934.1| (hypothetical protein ACHHYP_15310 [Achlya hypogyna])

HSP 1 Score: 121.324 bits (303), Expect = 3.215e-28
Identity = 77/232 (33.19%), Postives = 117/232 (50.43%), Query Frame = 0
Query:  154 ITAAVVAGSLVSPMITVLDLAIVRSQFDHIGVGTAVKRTASDLYTGRASW--NPALRIMGGVYLSTYMAANGTEAWCTENGIDYKIPTAVTTSLVNIVGVSLKDRAFARMMKKSA-SSFPLSSYLLFGIRDGMTVTSTFVLKNTVRDHLVEDLSFRPRYADIAASFAVPMLAQIPFTPLHILAMDLYVRKDATWLSRLQEIKSGYRNVLLGRVMRIVPAFGVGGVVNDMVKE 382
            + +A +A   V+P IT +D AI+ +      +  A+K    D      S+       ++ GVY +TY++AN  +  C    +D K P  ++T+ VN+    +KDR F RM    A + FPL+S  LF IRD +TV ++F+    +     +++   P  A+  A    PML Q   TPLH+LA+DLY  K +    R   I   Y      RV R+VPAFG GG+ N   ++
Sbjct:   31 LASAGIASFFVAPFITTVDRAIIENAAGARPLKQALKEITMDCIRNPLSFIRRKEFLLIYGVYTATYVSANAVDTVCETIEVDSKAPKFLSTTAVNMGACIIKDREFTRMFGVIAPTKFPLASMGLFAIRDSLTVGASFIAPPILAAKF-QEIGQTPGMANTLAQLTCPMLVQFVSTPLHLLALDLYNHKSSKASERASFISREYIKSTSARVARVVPAFGFGGIGNKYFRD 261          
BLAST of EWM23584.1 vs. NCBI_GenBank
Match: gi|661183987|emb|CDH53544.1| (hypothetical protein RO3G_08795 [Lichtheimia corymbifera JMRC:FSU:9682])

HSP 1 Score: 120.939 bits (302), Expect = 4.251e-28
Identity = 83/230 (36.09%), Postives = 118/230 (51.30%), Query Frame = 0
Query:  163 LVSPMITVLDLAIVRSQFDHIGVGTAVKRTASDLYTGRASW--NPALRIMGGVYLSTYMAAN----GTEAWCTENGID--YKIPTAVTTSLVNIVGVSLKDRAFARMMKKSAS-SFPLSSYLLFGIRDGMTVTSTFVLKNTVRDHLVEDLSFRPRY--ADIAASFAVPMLAQIPFTPLHILAMDLYVRKDATWLSRLQEIKSGYRNVLLGRVMRIVPAFGVGGVVNDMVK 381
            LV+P I+V+D AI+ +      +G  +K   + ++T    +   P  R++ G+Y STY+ AN     +E W    G    YK    + TS +N+    LKDRAFARM   +AS S PL SYLLF  RD +T+ ++F     V   L E+      +  A + A  A P   Q   TPLH+L +DLY R + +       I++ Y    L RV RI PAFG+GGV N   +
Sbjct:   36 LVAPFISVVDRAIIENANGKRPLGQGLKMGLTRIFTQPMQFAGTPQFRMIFGLYFSTYVTANVMDTTSEHWDVAQGTAAWYKF---LATSAINMSLCVLKDRAFARMFGVTASHSLPLMSYLLFAARDSLTIAASFTAPPVVTRWLFEEKQVFSSHKNAAVTAQLACPAAIQFISTPLHLLGLDLYNRSNVSPAQHFSLIRAEYLKSTLARVARIGPAFGIGGVGNTYFR 262          
BLAST of EWM23584.1 vs. NCBI_GenBank
Match: gi|1001613697|gb|KXS17451.1| (hypothetical protein M427DRAFT_97091 [Gonapodya prolifera JEL478])

HSP 1 Score: 121.324 bits (303), Expect = 4.766e-28
Identity = 78/231 (33.77%), Postives = 120/231 (51.95%), Query Frame = 0
Query:  157 AVVAGSLVSPMITVLDLAIVRSQFDHIGVGTAVKRTASDL----YTGRASWNPALRIMGGVYLSTYMAANGTEAWCTENGIDYKIPTAVTTSLVNIVGVSLKDRAFARMMKKSA-SSFPLSSYLLFGIRDGMTVTSTFVLKNTVRDHLVEDLSFRPRYADIAASFAVPMLAQIPFTPLHILAMDLYVRKDATWLSRLQEIKSGYRNVLLGRVMRIVPAFGVGGVVNDMVKE 382
            A+     V+P +TV+D AI+++      +  A+K  A ++    + G    NP   +M  VY  TY+ AN  E        D+  P  + TS+ NIV  ++KDRA+ R   K A  + P+ +Y LF  RD MT+ + F L   +  HL   L      A  A+   +P   Q+  TP+H+ A+D+Y R DAT   R  +I+  Y   +L R+ RI+PA G+GGV+N  ++E
Sbjct:   25 ALATAFCVAPFVTVIDRAIIQNAAGTSHLWPAIKTGAREILLRPWNGMLR-NPVFLLMWMVYGGTYVTANTIEVLSRRAKRDFVYPKFLGTSVTNIVLSTVKDRAYTRNFGKVAPKALPVYTYGLFWTRDMMTMAAAFTLPAPIAHHLHAHLDIPLTTAQTASQLILPCSIQLLSTPIHLAALDMYNRPDATLRQRAVQIRREYAKSVLARMGRILPALGIGGVLNGWLRE 254          
BLAST of EWM23584.1 vs. NCBI_GenBank
Match: gi|669165062|ref|XP_008618093.1| (hypothetical protein SDRG_13773 [Saprolegnia diclina VS20] >gi|530730203|gb|EQC28445.1| hypothetical protein SDRG_13773 [Saprolegnia diclina VS20])

HSP 1 Score: 119.783 bits (299), Expect = 1.927e-27
Identity = 74/232 (31.90%), Postives = 117/232 (50.43%), Query Frame = 0
Query:  154 ITAAVVAGSLVSPMITVLDLAIVRSQFDHIGVGTAVKRTASDLYTGRASW--NPALRIMGGVYLSTYMAANGTEAWCTENGIDYKIPTAVTTSLVNIVGVSLKDRAFARMMKKSA-SSFPLSSYLLFGIRDGMTVTSTFVLKNTVRDHLVEDLSFRPRYADIAASFAVPMLAQIPFTPLHILAMDLYVRKDATWLSRLQEIKSGYRNVLLGRVMRIVPAFGVGGVVNDMVKE 382
            + AA +A   V+P IT +D A++ +      +  A+   + D       +       ++ GVY +TY++AN  ++ C    +D  +P  ++T+ VN+    +KDR F RM    A + FPL S  LF IRD +TV ++F+    +     ++L   PR ++  A    PML Q   TPLH+L++DLY  K      R+  I   Y      RV R+VPAFG GG+ N   ++
Sbjct:   48 LAAAGIASFFVAPFITTVDRAVIENAAGARPLKKALVEISRDFVRNPLQFIRRKEFLLIYGVYTATYLSANAVDSLCETVEVDSNMPKFLSTTAVNMGACIIKDREFTRMFGVIAPTKFPLMSMGLFAIRDSLTVGASFIAPPILSAKF-QELGQTPRTSNTLAQLTCPMLVQFLSTPLHLLSLDLYNNKGVPMNQRMSFISREYIKSTGARVARVVPAFGFGGIGNKYFRD 278          
The following BLAST results are available for this feature:
BLAST of EWM23584.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585104723|gb|EWM23584.1|0.000e+0100.00hypothetical protein Naga_100266g4 [Nannochloropsi... [more]
gi|585104721|gb|EWM23582.1|1.147e-9255.42hypothetical protein Naga_100266g6 [Nannochloropsi... [more]
gi|552927784|gb|ESA11675.1|1.767e-2934.33hypothetical protein GLOINDRAFT_79841 [Rhizophagus... [more]
gi|929750848|ref|XP_014150407.1|5.496e-2934.33hypothetical protein SARC_10996 [Sphaeroforma arct... [more]
gi|1043306945|gb|OBZ91552.1|1.365e-2834.16hypothetical protein A0J61_00366 [Choanephora cucu... [more]
gi|813189501|ref|XP_012207551.1|1.572e-2832.33hypothetical protein SPRG_13165 [Saprolegnia paras... [more]
gi|1173929757|gb|OQR82934.1|3.215e-2833.19hypothetical protein ACHHYP_15310 [Achlya hypogyna... [more]
gi|661183987|emb|CDH53544.1|4.251e-2836.09hypothetical protein RO3G_08795 [Lichtheimia corym... [more]
gi|1001613697|gb|KXS17451.1|4.766e-2833.77hypothetical protein M427DRAFT_97091 [Gonapodya pr... [more]
gi|669165062|ref|XP_008618093.1|1.927e-2731.90hypothetical protein SDRG_13773 [Saprolegnia dicli... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7107rna7107Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications