EWM23592.1, cds7073 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23592.1 vs. NCBI_GenBank
Match: gi|585104733|gb|EWM23592.1| (Protein of unknown function DUF2039 [Nannochloropsis gaditana]) HSP 1 Score: 391.349 bits (1004), Expect = 9.645e-138 Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0 Query: 1 MGLPAYCYTRAAQVMSGQRRRGPAHQNTFAFRHNPKSKKTERILASPIEGLCHRCHEKVEWRKKYRKYKPLSAPATCTGCHTKSVRAAYHQICDPCAEKRAVCAGCAEPKSIVKKTGAAAEKDVEEKRRALERDIKGLHLRKQRKILREFDRSGGDMDVEGAMEAVGSDLDDDEIGDSDDKEYDEDSERE 190 MGLPAYCYTRAAQVMSGQRRRGPAHQNTFAFRHNPKSKKTERILASPIEGLCHRCHEKVEWRKKYRKYKPLSAPATCTGCHTKSVRAAYHQICDPCAEKRAVCAGCAEPKSIVKKTGAAAEKDVEEKRRALERDIKGLHLRKQRKILREFDRSGGDMDVEGAMEAVGSDLDDDEIGDSDDKEYDEDSERE Sbjct: 1 MGLPAYCYTRAAQVMSGQRRRGPAHQNTFAFRHNPKSKKTERILASPIEGLCHRCHEKVEWRKKYRKYKPLSAPATCTGCHTKSVRAAYHQICDPCAEKRAVCAGCAEPKSIVKKTGAAAEKDVEEKRRALERDIKGLHLRKQRKILREFDRSGGDMDVEGAMEAVGSDLDDDEIGDSDDKEYDEDSERE 190
BLAST of EWM23592.1 vs. NCBI_GenBank
Match: gi|585104732|gb|EWM23591.1| (Protein of unknown function DUF2039 [Nannochloropsis gaditana]) HSP 1 Score: 367.081 bits (941), Expect = 3.127e-128 Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0 Query: 12 AQVMSGQRRRGPAHQNTFAFRHNPKSKKTERILASPIEGLCHRCHEKVEWRKKYRKYKPLSAPATCTGCHTKSVRAAYHQICDPCAEKRAVCAGCAEPKSIVKKTGAAAEKDVEEKRRALERDIKGLHLRKQRKILREFDRSGGDMDVEGAMEAVGSDLDDDEIGDSDDKEYDEDSERE 190 AQVMSGQRRRGPAHQNTFAFRHNPKSKKTERILASPIEGLCHRCHEKVEWRKKYRKYKPLSAPATCTGCHTKSVRAAYHQICDPCAEKRAVCAGCAEPKSIVKKTGAAAEKDVEEKRRALERDIKGLHLRKQRKILREFDRSGGDMDVEGAMEAVGSDLDDDEIGDSDDKEYDEDSERE Sbjct: 11 AQVMSGQRRRGPAHQNTFAFRHNPKSKKTERILASPIEGLCHRCHEKVEWRKKYRKYKPLSAPATCTGCHTKSVRAAYHQICDPCAEKRAVCAGCAEPKSIVKKTGAAAEKDVEEKRRALERDIKGLHLRKQRKILREFDRSGGDMDVEGAMEAVGSDLDDDEIGDSDDKEYDEDSERE 189
BLAST of EWM23592.1 vs. NCBI_GenBank
Match: gi|585104731|gb|EWM23590.1| (Protein of unknown function DUF2039 [Nannochloropsis gaditana]) HSP 1 Score: 360.918 bits (925), Expect = 4.816e-126 Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0 Query: 15 MSGQRRRGPAHQNTFAFRHNPKSKKTERILASPIEGLCHRCHEKVEWRKKYRKYKPLSAPATCTGCHTKSVRAAYHQICDPCAEKRAVCAGCAEPKSIVKKTGAAAEKDVEEKRRALERDIKGLHLRKQRKILREFDRSGGDMDVEGAMEAVGSDLDDDEIGDSDDKEYDEDSERE 190 MSGQRRRGPAHQNTFAFRHNPKSKKTERILASPIEGLCHRCHEKVEWRKKYRKYKPLSAPATCTGCHTKSVRAAYHQICDPCAEKRAVCAGCAEPKSIVKKTGAAAEKDVEEKRRALERDIKGLHLRKQRKILREFDRSGGDMDVEGAMEAVGSDLDDDEIGDSDDKEYDEDSERE Sbjct: 1 MSGQRRRGPAHQNTFAFRHNPKSKKTERILASPIEGLCHRCHEKVEWRKKYRKYKPLSAPATCTGCHTKSVRAAYHQICDPCAEKRAVCAGCAEPKSIVKKTGAAAEKDVEEKRRALERDIKGLHLRKQRKILREFDRSGGDMDVEGAMEAVGSDLDDDEIGDSDDKEYDEDSERE 176
BLAST of EWM23592.1 vs. NCBI_GenBank
Match: gi|553190140|ref|XP_005855134.1| (hypothetical protein NGA_2024610, partial [Nannochloropsis gaditana CCMP526] >gi|553191168|ref|XP_005855332.1| hypothetical protein NGA_2024620, partial [Nannochloropsis gaditana CCMP526] >gi|422293727|gb|EKU21027.1| hypothetical protein NGA_2024620, partial [Nannochloropsis gaditana CCMP526] >gi|422293925|gb|EKU21225.1| hypothetical protein NGA_2024610, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 360.147 bits (923), Expect = 1.246e-125 Identity = 176/179 (98.32%), Postives = 177/179 (98.88%), Query Frame = 0 Query: 12 AQVMSGQRRRGPAHQNTFAFRHNPKSKKTERILASPIEGLCHRCHEKVEWRKKYRKYKPLSAPATCTGCHTKSVRAAYHQICDPCAEKRAVCAGCAEPKSIVKKTGAAAEKDVEEKRRALERDIKGLHLRKQRKILREFDRSGGDMDVEGAMEAVGSDLDDDEIGDSDDKEYDEDSERE 190 AQVMSGQRRRGPAHQNTFAFRHNPKSKKTERILASPIEGLC RCHEKVEWRKKYRKYKPLSAPATCTGCHTKSVRAAYHQICDPCAEKRAVCAGCAEPKSIVKKTGAAAEKDVEEKRRALERDIKGLHLRKQRKILREFDRSGGDMDVEGAMEAVGSDLDDD IGDSDDKE+DEDSERE Sbjct: 1 AQVMSGQRRRGPAHQNTFAFRHNPKSKKTERILASPIEGLCQRCHEKVEWRKKYRKYKPLSAPATCTGCHTKSVRAAYHQICDPCAEKRAVCAGCAEPKSIVKKTGAAAEKDVEEKRRALERDIKGLHLRKQRKILREFDRSGGDMDVEGAMEAVGSDLDDDGIGDSDDKEHDEDSERE 179
BLAST of EWM23592.1 vs. NCBI_GenBank
Match: gi|675195143|ref|XP_008906456.1| (hypothetical protein PPTG_12019 [Phytophthora parasitica INRA-310] >gi|566023120|gb|ETI46031.1| hypothetical protein F443_09550 [Phytophthora parasitica P1569] >gi|567960438|gb|ETK85997.1| hypothetical protein L915_09344 [Phytophthora parasitica] >gi|567989156|gb|ETL39423.1| hypothetical protein L916_09250 [Phytophthora parasitica] >gi|568018374|gb|ETL92549.1| hypothetical protein L917_09183 [Phytophthora parasitica] >gi|568048812|gb|ETM45841.1| hypothetical protein L914_09209 [Phytophthora parasitica] >gi|568093372|gb|ETN08168.1| hypothetical protein PPTG_12019 [Phytophthora parasitica INRA-310] >gi|570950607|gb|ETP15864.1| hypothetical protein F441_09483 [Phytophthora parasitica CJ01A1] >gi|570984264|gb|ETP43917.1| hypothetical protein F442_09457 [Phytophthora parasitica P10297] >gi|970665168|gb|KUG01889.1| hypothetical protein AM587_10010604 [Phytophthora nicotianae]) HSP 1 Score: 153.295 bits (386), Expect = 5.536e-44 Identity = 83/180 (46.11%), Postives = 115/180 (63.89%), Query Frame = 0 Query: 15 MSGQR----RRGPAHQNTFAFRHNPKSKKTERILASPIEGLCHRCHEKVEWRKKYRKYKPLSAPATCTGCHTKSVRAAYHQICDPCAEKRAVCAGCAEPKSIVKKTGAAAEKDV----EEKRRALERDIKGLHLRKQRKILREFDRSGGDMDVEGAMEAVGSDLDDDEIGDSDDKEYDED 186 MS QR +R P HQNTFAF+HNPKSKKT+RIL+ PI GLC +C +++EWRKKYRKYKPL+ P +C CH K+V +AYH CDPCA++R +CA C K IV A+E+++ E+K R E ++G+ R +R LR+ ++ + E G+D + +S D+E DED Sbjct: 1 MSSQRGNVKKRAPKHQNTFAFKHNPKSKKTDRILSMPIHGLCEKCRKQIEWRKKYRKYKPLTQPGSCIYCHQKTVTSAYHASCDPCAKERDICAKCCLTKEIV-----ASEQELLAEHEKKEREFENTLEGMRERDRRAYLRKLEK-----EKEAITNGEGADSAEVNGYESYDEE-DED 169
BLAST of EWM23592.1 vs. NCBI_GenBank
Match: gi|1214696527|gb|OWZ10027.1| (hypothetical protein PHMEG_00017186 [Phytophthora megakarya]) HSP 1 Score: 151.369 bits (381), Expect = 2.391e-43 Identity = 80/177 (45.20%), Postives = 112/177 (63.28%), Query Frame = 0 Query: 15 MSGQR----RRGPAHQNTFAFRHNPKSKKTERILASPIEGLCHRCHEKVEWRKKYRKYKPLSAPATCTGCHTKSVRAAYHQICDPCAEKRAVCAGCAEPKSIVKKTGAAAEKDV----EEKRRALERDIKGLHLRKQRKILREFDRSGGDMDVEGAMEAVG-SDLDDDEIGDSDDKE 182 MS QR +R P HQN FAF+HNPKSKKTERIL+ PI GLC +C ++EWRKKYRKYKPL+ P +C CH K+V +AYH CDPCA++R +CA C K +V A+E+++ E+K R E +++G+ R +R LR+ ++ + E G S+ D+ SDD++ Sbjct: 1 MSSQRGNVKKRAPKHQNAFAFKHNPKSKKTERILSMPIHGLCEKCRAQIEWRKKYRKYKPLTQPGSCIYCHQKTVTSAYHASCDPCAKERDICAKCCLKKEVV-----ASEQELLAEHEKKEREFENELEGMRERDRRAYLRKLEK-----EKEAITNGEGVSNTPDNGYESSDDED 167
BLAST of EWM23592.1 vs. NCBI_GenBank
Match: gi|301120694|ref|XP_002908074.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262103105|gb|EEY61157.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 150.214 bits (378), Expect = 7.460e-43 Identity = 78/178 (43.82%), Postives = 108/178 (60.67%), Query Frame = 0 Query: 15 MSGQR----RRGPAHQNTFAFRHNPKSKKTERILASPIEGLCHRCHEKVEWRKKYRKYKPLSAPATCTGCHTKSVRAAYHQICDPCAEKRAVCAGCAEPKSIVKKTGAAAEKDVEEKRRALERDIKGLHLRKQRKILREFDRSGGDMDVEGAMEAVGSDLDDDEIGDSDDKEYDEDSE 188 MS QR +R P HQN FAF+HNPKS+KTERI++ PI GLC +C +++EWRKKYRKYKPL+ P +C CH K+V +AYH CDPCA++R +CA C K IV + + E+K R E ++G+ R +R LR+ ++ EA+ + D + + YDED E Sbjct: 1 MSSQRGNVKKRAPKHQNAFAFKHNPKSRKTERIMSMPIHGLCEKCRKQIEWRKKYRKYKPLTQPGSCIYCHQKTVTSAYHASCDPCAKERDICAKCCLAKEIVARCQELL-AEHEKKEREFENTLEGMRERDRRAYLRKLEKEK---------EAITNRESVDSAEGNAYESYDEDDE 168
BLAST of EWM23592.1 vs. NCBI_GenBank
Match: gi|970645784|gb|KUF86154.1| (hypothetical protein AM588_10002932 [Phytophthora nicotianae]) HSP 1 Score: 149.443 bits (376), Expect = 2.430e-42 Identity = 82/191 (42.93%), Postives = 117/191 (61.26%), Query Frame = 0 Query: 15 MSGQR----RRGPAHQNTFAFRHNPKSKKTERILASPIEGLCHRCHEKVEWRKKYRKYKPLSAPATCTGCHTKSVRAAYHQICDPCAEKRAVCAGCAEPKSIVKKTGAA---------AEKDV----EEKRRALERDIKGLHLRKQRKILREFDRSGGDMDVEGAMEAVGSDLDDDEIGDSDDKEYDEDSE 188 MS QR +R P HQNTFAF+HNPKSKKT+RIL+ PI GLC +C +++EWRKKYRKYKPL+ P +C CH K+V +AYH CDPCA++R +CA C K IV + + +E+++ E+K R E ++G+ R +R LR+ ++ + E G+D + +S D+E DED + Sbjct: 1 MSSQRGNVKKRAPKHQNTFAFKHNPKSKKTDRILSMPIHGLCEKCRKQIEWRKKYRKYKPLTQPGSCIYCHQKTVTSAYHASCDPCAKERDICAKCCLTKEIVARLLTSFWAIVAVVDSEQELLAEHEKKEREFENTLEGMRERDRRAYLRKLEK-----EKEAITNGEGADSAEVNGYESYDEE-DEDMQ 185
BLAST of EWM23592.1 vs. NCBI_GenBank
Match: gi|695413431|ref|XP_009526032.1| (hypothetical protein PHYSODRAFT_504062 [Phytophthora sojae] >gi|348677157|gb|EGZ16974.1| hypothetical protein PHYSODRAFT_504062 [Phytophthora sojae]) HSP 1 Score: 149.058 bits (375), Expect = 2.436e-42 Identity = 71/142 (50.00%), Postives = 96/142 (67.61%), Query Frame = 0 Query: 15 MSGQR----RRGPAHQNTFAFRHNPKSKKTERILASPIEGLCHRCHEKVEWRKKYRKYKPLSAPATCTGCHTKSVRAAYHQICDPCAEKRAVCAGCAEPKSIVKKTGAAAEKDVEEKRRALERDIKGLHLRKQRKILREFDR 152 MS QR +R P HQN FAF+HNPKSKKTERI++ PI GLC +C +++EWRKKYRKYKPL+ P +C CH K+V +AYH CDPCA++R +CA C K IV + + E+K R E ++G+ R +R LR+ ++ Sbjct: 1 MSTQRGNVKKRAPKHQNAFAFKHNPKSKKTERIMSMPIHGLCEKCRKQIEWRKKYRKYKPLTQPGSCIYCHQKTVTSAYHASCDPCAKERDICAKCCLSKEIVARCQELL-AEHEKKEREFENQLEGMRERDRRAYLRKLEK 141
BLAST of EWM23592.1 vs. NCBI_GenBank
Match: gi|673029152|ref|XP_008868537.1| (hypothetical protein H310_05572 [Aphanomyces invadans] >gi|574476154|gb|ETW03153.1| hypothetical protein H310_05572 [Aphanomyces invadans]) HSP 1 Score: 148.288 bits (373), Expect = 4.758e-42 Identity = 71/139 (51.08%), Postives = 99/139 (71.22%), Query Frame = 0 Query: 15 MSGQR----RRGPAHQNTFAFRHNPKSKKTERILASPIEGLCHRCHEKVEWRKKYRKYKPLSAPATCTGCHTKSVRAAYHQICDPCAEKRAVCAGCAEPKSIVKKTGAAAEKDVEEKRRALERDIKGLHLRKQRKILRE 149 MS QR + P +QN+FAF+HNPKSKKTE IL PI GLC CH ++ WRKKYRKYKPL+ PA+CT CH K++ +AYH +CDPCA+++ VCA C + + +V AE+ EE++ E+ ++GL R++RK+LR+ Sbjct: 1 MSSQRGNLKKGAPKYQNSFAFKHNPKSKKTEHILGLPIHGLCPHCHAQIVWRKKYRKYKPLTQPASCTSCHQKTIISAYHVLCDPCAKEKGVCAKCCKSEELVLSEQQLAEQKDEEQKDFSEQ-LEGLKERERRKVLRQ 138 The following BLAST results are available for this feature:
BLAST of EWM23592.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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