EWM23595.1, cds7069 (CDS) Nannochloropsis gaditana

Overview
NameEWM23595.1
Unique Namecds7069
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002470.1:415866..415892 +
Alignment locationCM002470.1:416086..416231 +
Alignment locationCM002470.1:416419..416941 +
Alignment locationCM002470.1:417063..418037 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23595.1
Productconserved unknown protein
Orig transcript idgnl|cribi|Naga_100139g1.4747.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:415866..415892 +
CM002470.1supercontigCM002470.1:416086..416231 +
CM002470.1supercontigCM002470.1:416419..416941 +
CM002470.1supercontigCM002470.1:417063..418037 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold
IPR011989ARM-like
Homology
BLAST of EWM23595.1 vs. NCBI_GenBank
Match: gi|585104736|gb|EWM23595.1| (conserved unknown protein [Nannochloropsis gaditana])

HSP 1 Score: 1097.03 bits (2836), Expect = 0.000e+0
Identity = 556/556 (100.00%), Postives = 556/556 (100.00%), Query Frame = 0
Query:    1 MGRWVSYYRDLPPTDLVENRILLDAFAVIAQGAARNGHERLFQSAVDLLIDVFVAYDFSHPEGISLDACLPLAQFLVPNVFALQPTYLASLRPSSLPPSAGPSPHGDTDTAKGICMVFVEMALSYLPLLLSPEPYQQEALLRLLLLVTSHPEPSVSEYALPFWYELAKAGGRRAGDGGSPGVGERYASILQELLRALVERMVYPPEAGEGGREGGGWDEEEKEEFDDFRYKLGDAVKDVSSLLGPSPCLHALAHLLHATLSTPTPSLPPSHPPSWRQTEACLWALRSLAPSLPLPPSLPSSAPLDTDTTTALTVVPQLLSLLLSQASPSSPSALSLPPLLRVTIHHVVGRLAPFLPPHPPSSTTDLLPFAYPLLLADLGSPAASASAARALQEVLLACGRVTGPDSLPPLTLFGQIYTASLAGQLSFGNETLVVEGILEGVVARMGGEGGGEGGREGGREEVVQRMVGMVGEHLGDVVRKEQQERRREGGGEGGGKRQLMVEQDLERLTTIVRVSEPRLSGEEGGREGGREGGRDVACGGGRAEPFARLTGHLRRV 556
            MGRWVSYYRDLPPTDLVENRILLDAFAVIAQGAARNGHERLFQSAVDLLIDVFVAYDFSHPEGISLDACLPLAQFLVPNVFALQPTYLASLRPSSLPPSAGPSPHGDTDTAKGICMVFVEMALSYLPLLLSPEPYQQEALLRLLLLVTSHPEPSVSEYALPFWYELAKAGGRRAGDGGSPGVGERYASILQELLRALVERMVYPPEAGEGGREGGGWDEEEKEEFDDFRYKLGDAVKDVSSLLGPSPCLHALAHLLHATLSTPTPSLPPSHPPSWRQTEACLWALRSLAPSLPLPPSLPSSAPLDTDTTTALTVVPQLLSLLLSQASPSSPSALSLPPLLRVTIHHVVGRLAPFLPPHPPSSTTDLLPFAYPLLLADLGSPAASASAARALQEVLLACGRVTGPDSLPPLTLFGQIYTASLAGQLSFGNETLVVEGILEGVVARMGGEGGGEGGREGGREEVVQRMVGMVGEHLGDVVRKEQQERRREGGGEGGGKRQLMVEQDLERLTTIVRVSEPRLSGEEGGREGGREGGRDVACGGGRAEPFARLTGHLRRV
Sbjct:    1 MGRWVSYYRDLPPTDLVENRILLDAFAVIAQGAARNGHERLFQSAVDLLIDVFVAYDFSHPEGISLDACLPLAQFLVPNVFALQPTYLASLRPSSLPPSAGPSPHGDTDTAKGICMVFVEMALSYLPLLLSPEPYQQEALLRLLLLVTSHPEPSVSEYALPFWYELAKAGGRRAGDGGSPGVGERYASILQELLRALVERMVYPPEAGEGGREGGGWDEEEKEEFDDFRYKLGDAVKDVSSLLGPSPCLHALAHLLHATLSTPTPSLPPSHPPSWRQTEACLWALRSLAPSLPLPPSLPSSAPLDTDTTTALTVVPQLLSLLLSQASPSSPSALSLPPLLRVTIHHVVGRLAPFLPPHPPSSTTDLLPFAYPLLLADLGSPAASASAARALQEVLLACGRVTGPDSLPPLTLFGQIYTASLAGQLSFGNETLVVEGILEGVVARMGGEGGGEGGREGGREEVVQRMVGMVGEHLGDVVRKEQQERRREGGGEGGGKRQLMVEQDLERLTTIVRVSEPRLSGEEGGREGGREGGRDVACGGGRAEPFARLTGHLRRV 556          
BLAST of EWM23595.1 vs. NCBI_GenBank
Match: gi|299116889|emb|CBN74999.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 150.599 bits (379), Expect = 1.088e-34
Identity = 136/527 (25.81%), Postives = 226/527 (42.88%), Query Frame = 0
Query:    4 WVSYYRDLPPTDLVENRILLDAFAVIAQGAARNGHERLFQSAVDLLIDVFVAYDFSHPEGISLDACLPLAQFLVPNVFALQPTYLASLRPSSLPPSAGPSPHGDTDTAKGICMVFVEMALSYLPLLLSPEPYQQEALLRLLLLVTSHPEPSVSEYALPFWYELAKAGGRRAGDGGSPGVGERYASILQELLRALVERMVYPPEAGEGGREGGGWDEEEKEEFDDF---RYKLGDAVKDVSSLLGPSPCLHALAHLLHATLSTPTPSLPPSHPPSWRQTEACLWALRSLAPSLPLPPSLPSSAPLDTDTTTALTVVPQLLSLLLSQASPSSPSALSLPPLLRVTIHHVVGRLAPFLPPHPPSSTTDLLPFAYPLLLADLGSPAASASAARALQEVLLACGRVTGPDSLPPLTLFGQIYTASLAGQLSFGNETLVVEGILEGVVARMGGEGGGEGGREGGREEVVQRMVGMVGEHLGDVVRKEQQERRREGGGEGGGKRQLMVEQDLERLTTIVRVSEPRLSGEEGGRE 527
            WV +  ++P  ++V N +L  AF  +       G++ LF++AVDLL++V   Y  ++           + Q +VP   AL+  Y+ SL               D D A+G+C +F EM  +Y+ ++++P+   Q  L+ L+L+ TSHPE  ++   L FWY   +                 +   L  L+  LV  M YP +           DE   +E DD    RY + D ++DV  +LG   CL  +  LL   L T      P  P +W+  EACL+A RS+   +P               T+  T+VPQ++ +L     P  P        +R T   +VG+ + +L  HP   T       +  L+    SP    +AA A++ V  +CG++ G   L  L        A    ++   +E  +++G L  VV+ +  +              ++R+V  +   L           +R+G   G  K   + +Q+L+RLT +V  + P +   + GRE
Sbjct:  273 WVRHV-NVPGDEVVRNPLLSAAFDAL-------GNQELFETAVDLLVEVLRKYKANN---------FLIVQLMVPKAMALEAAYMKSLEEE------------DADVARGLCRLFTEMGEAYMDVIMAPDDRGQLKLVELVLMCTSHPEREIATIPLYFWYLFCRTLESLEPADLRTARCTMFGPCLMRLIGVLVALMRYPEDV----------DELAYDEIDDLKRHRYDVADVLRDVCRILGGVQCLRQVVILLDQELGTLGALARPDEPGAWQGVEACLFATRSIGRDIP---------------TSEETIVPQIVGML-----PRLPGNHH----VRYTATLIVGKYSEWLKLHPEHLTE-----MFAFLMEGFASPEVMPAAATAIKNVCHSCGQLMGEQVLGLLQGHLNEAKAREEHRIDIKDELELLQG-LSYVVSTLAPDPAAAA---------IRRLVEPMATGL-----------QRDGVAGGDAK---LAQQELDRLTVVVSRANPVM---QAGRE 704          
BLAST of EWM23595.1 vs. NCBI_GenBank
Match: gi|673040257|ref|XP_008874089.1| (hypothetical protein H310_09716 [Aphanomyces invadans] >gi|574470368|gb|ETV97379.1| hypothetical protein H310_09716 [Aphanomyces invadans])

HSP 1 Score: 109.768 bits (273), Expect = 1.724e-21
Identity = 122/460 (26.52%), Postives = 197/460 (42.83%), Query Frame = 0
Query:    1 MGRWVSYY-RDLPPTDLV-ENRILLDAFAVIAQGAARNGHERLFQSAVDLLIDVFVAYDFSHPEGISLDACLPLAQFLVPNVFALQPTYLASLRPSSLPPSAGPSPHGDTDTAKGICMVFVEMALSYLPLLLSPEPYQQEALLRLLLLVTSHPEPSVSEYALPFWYELAKAGGRRAGDGGSPGVGERYASILQELLRALVERMVYPPEAGEGGREGG-GWDEEEKEEFDDFRYKLGDAVKDVSSLLGPSPCLHALAHLLHATLSTPTPSLPPSHPPSWRQTEACLWALRSLA----PSLPLPPSLPSSA---PLD-TDTTTALTVVPQLLSLLLSQASPSSPSALSLPPLLRVTIHHVVGRLAPFLPPHPPSSTTDLLPFAYPLLLA--------DLGSPAASASAARALQEVLLACGRVTGPDSLPPLTLFGQIYTASLAGQLSFGNETLVVEGILEGV 441
            M  WV    RD    DLV +N +  +A  V+ +G   +    LF +AVDL+++V   Y+ +  +       LP+ Q+L+P +  L+P          L  SA    H +     G+  VF EMA  YL +LL   P  Q  ++  LL   + P+  V+E  +PFW+   +A            +   +A  L  L R  +  M +        R+G      ++K++F +FR +LGD ++D   LLG    L+     LH+ L+    + P +H   W   EA L++ RS+A      L  P   P++A   PLD T   T  + +PQ          P+ P+       ++ T   V+ R A +L  +  +    LL F    +          D   P A A+A R L    + C    G D +     +GQ+  +     L   ++ +++EGI +GV
Sbjct:  160 MAEWVKLLDRDARHPDLVIQNPLTTNAIHVLKRGL--DDTSELFDAAVDLIVEVIRTYNSTLVD-------LPVIQWLIPQLMQLKP----------LLTSAVAQDHAEC--CMGLTRVFTEMAEVYLDILLGDSPMNQVMMVDTLLECMTFPDADVAEVTIPFWFAFTEAVRFTQDAAQKQTLLANFAPSLTNLTRICMHTMCF--------RDGFLHLPTDKKQDFKNFRKELGDILQDCCVLLGTESVLNHCVQGLHSILNQRDAA-PETH---WESIEAHLYSFRSIARQVEAQLQGPSKDPNAAKRPPLDETPLHTIFSFLPQF---------PAHPA-------IQYTSCLVISRYAEWLAGNGAAYLPALLRFVDATITTSTARRDYQDWQVPTAVAAALRGL---CMDCWPHVGRDLMQ---YYGQLQASD---TLHVDDQVILLEGICKGV 561          
BLAST of EWM23595.1 vs. NCBI_GenBank
Match: gi|698820255|ref|XP_009843156.1| (hypothetical protein H257_16424 [Aphanomyces astaci] >gi|574101781|gb|ETV67341.1| hypothetical protein H257_16424 [Aphanomyces astaci])

HSP 1 Score: 104.375 bits (259), Expect = 1.024e-19
Identity = 119/455 (26.15%), Postives = 193/455 (42.42%), Query Frame = 0
Query:    1 MGRWVSYY-RDLPPTDLV-ENRILLDAFAVIAQGAARNGHERLFQSAVDLLIDVFVAYDFSHPEGISLDACLPLAQFLVPNVFALQPTYLASLRPSSLPPSAGPSPHGDTDTAKGICMVFVEMALSYLPLLLSPEPYQQEALLRLLLLVTSHPEPSVSEYALPFWYELAKAGGRRAGDGGSPGVGERYASILQELLRALVERMVYPPEAGEGGREGGGWDEEEKEEFDDFRYKLGDAVKDVSSLLGPSPCLHALAHLLHATLSTPTPSLPPSHPPSWRQTEACLWALRSLAPSLPLPPSLPSSA---PLD-TDTTTALTVVPQLLSLLLSQASPSSPSALSLPPLLRVTIHHVVGRLAPFLPPHPPSSTTDLLPFAYPLLLA--------DLGSPAASASAARALQEVLLACGRVTGPDSLPPLTLFGQIYTASLAGQLSFGNETLVVEGILEGV 441
            M  WV    RD    DLV +N +   A  V+ +G   +    LF +AVDL+++V   Y+ +  +       LP+ Q+L+P +  L+P + A+            +    T+   G+  VF EMA  YL +LL   P  Q  ++  LL   + P+P ++   +PFW+   +A            +   +A  L  L R  +  M +     +G RE      +++++F +FR +LGD ++D   LLG    L      LHA L+ P  S P +    W   EA L++ RS+A  + L     S A   P+D T   T    +P+          P+ P+       ++ T   V+ R A +L     +    LL F    +          D   P A A+A R L    L C    G D    +  +GQ+  +     L   ++ +++EGI +GV
Sbjct:  159 MAEWVKLLDRDARHPDLVIKNPLTTYAIQVLHRGL--DDTSDLFDAAVDLVVEVIRTYNSTLVD-------LPVIQWLIPQLMQLKPLFTAA------------AAQEITECCLGLARVFTEMAEVYLDILLGDSPMNQVLVVDTLLECMAFPDPELAAITIPFWFAFTEALRFVPDVHQKQTLLRNFAPSLTNLSRICMHTMCF----RDGFRE---LPSDKQQDFKNFRMELGDILQDCCVLLGTDLVLAHCVQGLHAILTDPDSS-PDAQ---WESIEAHLYSFRSIARQVELQLQDSSKAGHPPMDETPLHTIFAFLPRF---------PAHPA-------IQYTSCLVISRYAEWLAGSGAAYLASLLTFVDATVTMSATRHDYHDWQVPTAVAAALRGL---CLDCWAHVGRD---LMQYYGQLQASD---ALDVEDQVILLEGICKGV 556          
BLAST of EWM23595.1 vs. NCBI_GenBank
Match: gi|698820257|ref|XP_009843157.1| (hypothetical protein, variant 1 [Aphanomyces astaci] >gi|574101782|gb|ETV67342.1| hypothetical protein, variant 1 [Aphanomyces astaci])

HSP 1 Score: 103.99 bits (258), Expect = 1.414e-19
Identity = 125/484 (25.83%), Postives = 203/484 (41.94%), Query Frame = 0
Query:    1 MGRWVSYY-RDLPPTDLV-ENRILLDAFAVIAQGAARNGHERLFQSAVDLLIDVFVAYDFSHPEGISLDACLPLAQFLVPNVFALQPTYLASLRPSSLPPSAGPSPHGDTDTAKGICMVFVEMALSYLPLLLSPEPYQQEALLRLLLLVTSHPEPSVSEYALPFWYELAKAGGRRAGDGGSPGVGERYASILQELLRALVERMVYPPEAGEGGREGGGWDEEEKEEFDDFRYKLGDAVKDVSSLLGPSPCLHALAHLLHATLSTPTPSLPPSHPPSWRQTEACLWALRSLAPSLPLPPSLPSSA---PLD-TDTTTALTVVPQLLSLLLSQASPSSPSALSLPPLLRVTIHHVVGRLAPFLPPHPPSSTTDLLPFAYPLLLA--------DLGSPAASASAARALQEVLLACGRVTGPDSLPPLTLFGQIYTASLAGQLSFGNETLVVEGILEGVVARMGGEGGGEGGREGGREEVVQRMVGMV 470
            M  WV    RD    DLV +N +   A  V+ +G   +    LF +AVDL+++V   Y+ +  +       LP+ Q+L+P +  L+P + A+            +    T+   G+  VF EMA  YL +LL   P  Q  ++  LL   + P+P ++   +PFW+   +A            +   +A  L  L R  +  M +     +G RE      +++++F +FR +LGD ++D   LLG    L      LHA L+ P  S P +    W   EA L++ RS+A  + L     S A   P+D T   T    +P+          P+ P+       ++ T   V+ R A +L     +    LL F    +          D   P A A+A R L    L C    G D    +  +GQ+     +  L   ++ +++EGI +GV   +G         E     + QRM G++
Sbjct:  159 MAEWVKLLDRDARHPDLVIKNPLTTYAIQVLHRGL--DDTSDLFDAAVDLVVEVIRTYNSTLVD-------LPVIQWLIPQLMQLKPLFTAA------------AAQEITECCLGLARVFTEMAEVYLDILLGDSPMNQVLVVDTLLECMAFPDPELAAITIPFWFAFTEALRFVPDVHQKQTLLRNFAPSLTNLSRICMHTMCF----RDGFRE---LPSDKQQDFKNFRMELGDILQDCCVLLGTDLVLAHCVQGLHAILTDPDSS-PDAQ---WESIEAHLYSFRSIARQVELQLQDSSKAGHPPMDETPLHTIFAFLPRF---------PAHPA-------IQYTSCLVISRYAEWLAGSGAAYLASLLTFVDATVTMSATRHDYHDWQVPTAVAAALRGL---CLDCWAHVGRD---LMQYYGQLQA---SDALDVEDQVILLEGICKGV--SVGDPHLIVPALEALVAPIAQRMNGIL 583          
BLAST of EWM23595.1 vs. NCBI_GenBank
Match: gi|698820259|ref|XP_009843158.1| (hypothetical protein, variant 2 [Aphanomyces astaci] >gi|574101783|gb|ETV67343.1| hypothetical protein, variant 2 [Aphanomyces astaci])

HSP 1 Score: 103.219 bits (256), Expect = 1.963e-19
Identity = 125/484 (25.83%), Postives = 203/484 (41.94%), Query Frame = 0
Query:    1 MGRWVSYY-RDLPPTDLV-ENRILLDAFAVIAQGAARNGHERLFQSAVDLLIDVFVAYDFSHPEGISLDACLPLAQFLVPNVFALQPTYLASLRPSSLPPSAGPSPHGDTDTAKGICMVFVEMALSYLPLLLSPEPYQQEALLRLLLLVTSHPEPSVSEYALPFWYELAKAGGRRAGDGGSPGVGERYASILQELLRALVERMVYPPEAGEGGREGGGWDEEEKEEFDDFRYKLGDAVKDVSSLLGPSPCLHALAHLLHATLSTPTPSLPPSHPPSWRQTEACLWALRSLAPSLPLPPSLPSSA---PLD-TDTTTALTVVPQLLSLLLSQASPSSPSALSLPPLLRVTIHHVVGRLAPFLPPHPPSSTTDLLPFAYPLLLA--------DLGSPAASASAARALQEVLLACGRVTGPDSLPPLTLFGQIYTASLAGQLSFGNETLVVEGILEGVVARMGGEGGGEGGREGGREEVVQRMVGMV 470
            M  WV    RD    DLV +N +   A  V+ +G   +    LF +AVDL+++V   Y+ +  +       LP+ Q+L+P +  L+P + A+            +    T+   G+  VF EMA  YL +LL   P  Q  ++  LL   + P+P ++   +PFW+   +A            +   +A  L  L R  +  M +     +G RE      +++++F +FR +LGD ++D   LLG    L      LHA L+ P  S P +    W   EA L++ RS+A  + L     S A   P+D T   T    +P+          P+ P+       ++ T   V+ R A +L     +    LL F    +          D   P A A+A R L    L C    G D    +  +GQ+     +  L   ++ +++EGI +GV   +G         E     + QRM G++
Sbjct:  159 MAEWVKLLDRDARHPDLVIKNPLTTYAIQVLHRGL--DDTSDLFDAAVDLVVEVIRTYNSTLVD-------LPVIQWLIPQLMQLKPLFTAA------------AAQEITECCLGLARVFTEMAEVYLDILLGDSPMNQVLVVDTLLECMAFPDPELAAITIPFWFAFTEALRFVPDVHQKQTLLRNFAPSLTNLSRICMHTMCF----RDGFRELPS---DKQQDFKNFRMELGDILQDCCVLLGTDLVLAHCVQGLHAILTDPDSS-PDAQ---WESIEAHLYSFRSIARQVELQLQDSSKAGHPPMDETPLHTIFAFLPRF---------PAHPA-------IQYTSCLVISRYAEWLAGSGAAYLASLLTFVDATVTMSATRHDYHDWQVPTAVAAALRGL---CLDCWAHVGRD---LMQYYGQLQA---SDALDVEDQVILLEGICKGV--SVGDPHLIVPALEALVAPIAQRMNGIL 583          
BLAST of EWM23595.1 vs. NCBI_GenBank
Match: gi|1069921247|ref|XP_018272815.1| (hypothetical protein RHOBADRAFT_51763 [Rhodotorula graminis WP1] >gi|939614748|gb|KPV76766.1| hypothetical protein RHOBADRAFT_51763 [Rhodotorula graminis WP1])

HSP 1 Score: 100.908 bits (250), Expect = 1.301e-18
Identity = 103/399 (25.81%), Postives = 170/399 (42.61%), Query Frame = 0
Query:   28 VIAQGAARNGHERLFQSAVDLLIDVFVAYDFSHPEGISLDACLPLAQFLVPNVFALQPTYLASLRPSSLPPSAGPSPHGDTDTAKGICMVFVEMALSYLPLLLSPEPYQQEALLRLLLLVTSHPEPSVSEYALPFWYELAKAGGRRAGDGGSPGVGERYASILQELLRALVERMVYPPEAGEGGREGGGWDEEEKEEFDDFRYKLGDAVKDVSSLLGPSPCLHALAHLLHATLSTPTPSLPPSHPPSWRQTEACLWALRSLAPSLPLPPSLPSSAPLDTDTTTALTVVPQLLSLLLSQASPSSPSALSLPPLLRVTIHHVVGRLAPFLPPHPPSSTTDLLPFAYPLLLA--DLGSPAASASAARALQEVLLACGRVTGPDSLPPLTLFGQIYTASLAGQ 424
            ++A   +   H+ LF +AVD+L+D+         E + L   + + Q +VP + AL P              A P+   D D  +G C V VE    Y PL++   P     L+ L+    ++ E  V    L FWY LAK   +    G SP + E    +  +L+  ++  + YP EA +          E+++ F DFRYK+GD +KD   +LG  PCL     ++       + ++       W+  EA L+++RS+   + +          D D      +VP+++ +L     P  P      P +R     V+GR   +   HP     + + F  P + A  D   P   A+A++ ++ +   C     P  LP L  F Q  +A L G+
Sbjct:  224 ILAAAFSALSHDELFDAAVDVLVDII-------HETMELQENVAVIQEIVPRLTALGPNL------------ADPATLDDEDKMRGYCRVLVEAGEWYEPLIVQ-HPASFLPLVELIKQCAAYQELEVVGITLNFWYRLAKGILKV---GPSPAL-EPLVRVFADLVGIVIGHLHYPDEASQ-------LSGEDRDTFRDFRYKIGDTLKDCCEVLGSGPCLQQAYDII-------SRAVAAGDAVKWQDVEAPLFSMRSMGSKIDVR---------DND------LVPRIMEML-----PKLPPH----PRIRYAAILVIGRYTHWTQQHP-----EHIQFQLPYVSAGFDESDPEVLAAASQTMKYLCKDCAEHLVP-FLPQLHTFIQSVSAKLNGE 554          
BLAST of EWM23595.1 vs. NCBI_GenBank
Match: gi|1046774750|gb|OCK83054.1| (ARM repeat-containing protein [Lepidopterella palustris CBS 459.81])

HSP 1 Score: 100.523 bits (249), Expect = 1.810e-18
Identity = 77/293 (26.28%), Postives = 136/293 (46.42%), Query Frame = 0
Query:    6 SYYRDLPPTDLVEN---RILLDAFAVIAQGAARNGHERLFQSAVDLLIDVFVAYDFSHPEGISLDACLPLAQFLVPNVFALQPTYLASLRPSSLPPSAGPSPHGDTDTAKGICMVFVEMALSYLPLLLSPEPYQQEALLR-LLLLVTSHPEPSVSEYALPFWYELAKAGGRRAGDGGSPGVGERYASILQELLRALVERMVYP-PEAGEGGREGGGWDEEEKEEFDDFRYKLGDAVKDVSSLLGPSPCLHALAHLLHATLSTPTPSLPPSHPPSWRQTEACLWALRSLAPSLP 293
            S+ R++P  D+V +   +I++DA +           +  F+SAV+ L  +F        E   +D C+ + Q L P+V AL+P    + R              DTD  KGI  +F E   +++ +L++  P +  AL+  +L       E     +   FWYEL +        G        Y  I  +L+  ++  + YP PE+G+      G D +++E+F +FR+++GD +KD   ++G + CL     L+   +    P     H P W++ EA L++LR++   +P
Sbjct:  211 SWLREVPLNDIVNSSLLKIIIDALSA----------DEPFESAVECLCAIF-------NETRDVDECITIIQTLYPHVIALRPKIAEAAR------------EEDTDKYKGIARIFAEAGEAWV-VLIARMPVEFRALVEGILETAAMDSERDAISHTFKFWYELKQYLTLERYIGSRM----EYVDIYSKLVDIMIGHLEYPKPESGDEKDLFEG-DRDQEEKFREFRHQMGDVLKDCCEVIGVTDCLQKSYALIEIWVQNYGPQASAGHVPEWQKLEAPLFSLRAMGRMVP 468          
BLAST of EWM23595.1 vs. NCBI_GenBank
Match: gi|576994648|gb|EUC67243.1| (mRNA transport regulator [Rhizoctonia solani AG-3 Rhs1AP])

HSP 1 Score: 98.2117 bits (243), Expect = 1.002e-17
Identity = 102/415 (24.58%), Postives = 176/415 (42.41%), Query Frame = 0
Query:   39 ERLFQSAVDLLIDVFVAYDFSHPEGISLDACLPLAQFLVPNVFALQPTYLASLRPSSLPPSAGPSPHGDTDTAKGICMVFVEMALSYLPLLL-SPEPYQQEALLRLLLLVTSHPEPSVSEYALPFWYELAKAGGRRAGDGGSPGVGERYASILQELLRALVERMVYPPEAGEGGREGGGWDEEEKEEFDDFRYKLGDAVKDVSSLLGPSPCLHALAHLLHATLSTPTPSLPPSHPPSWRQTEACLWALRSLAPSLPLPPSLPSSAPLDTDTTTALTVVPQLLSLLLSQASPSSPSALSLPPLLRVTIHHVVGRLAPFLPPHPPSSTTDLLPFAYPLLLADLGSPAASASAARALQEVLLACGRVTGPDSLPPLTLFGQI--YTASLAGQLSFGNETLVVEGILEGVVARMGGEGG 450
            E+LF SAVD++ D+         E   +D  LP+ + +   + A++P  LA +               D+D  +G   VF E   +Y  L++   E +Q   ++  +L   S+P+  V      FWY LA     R  D  SP + + Y    Q L   +++ + +P +  E          +E++EF DFR+ +GD +KD   +LG S CL     ++   L TP  +       +W+  EA L+A+RS+   +P         P D +      VVP+++ L++          L   P +R     VV R   ++  H PS    LL +       D       A+A +AL+ +   C R          + F Q+  +  +++ ++S  +   + EGI   + A +  + G
Sbjct:  237 EQLFDSAVDVICDII-------HETQEVDDFLPIIEQITARLIAIKPK-LAEV-------------GDDSDKMRGYTRVFAEAGETYRTLIVGHTETFQ--PIIEAILECASYPDLDVVPITFQFWYHLAMTARNR-RDSVSPAIADVY----QRLTGVMIDHLRFPADFDE-------LPAQERDEFRDFRHIMGDTLKDCCYVLGSSLCLSRTYEMIMKILGTPASN------QAWQDIEAPLFAMRSMGAEIP---------PTDEE------VVPRIMDLVVQ---------LPAHPKVRYAATLVVSRYTEWVALH-PSYIPGLLEYISTAF--DDSDKEVVAAAGQALRFLCKDCNRHLT-------SYFAQLHSFVQTISPKISQSDRVEIYEGIAHVISAMLLQDAG 576          
BLAST of EWM23595.1 vs. NCBI_GenBank
Match: gi|813161747|ref|XP_012202603.1| (hypothetical protein SPRG_20517 [Saprolegnia parasitica CBS 223.65] >gi|641532699|gb|KDO26719.1| hypothetical protein SPRG_20517 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 95.5153 bits (236), Expect = 6.883e-17
Identity = 109/494 (22.06%), Postives = 200/494 (40.49%), Query Frame = 0
Query:    1 MGRWVSYYRDLP--PTDLVENRILLDAFAVIAQGAARNGHERLFQSAVDLLIDVFVAYDFSHPEGISLDACLPLAQFLVPNVFALQPTYLASLRPSSLPPSAGPSPHGDTDTAKGICMVFVEMALSYLPLLLSPEPYQQEALLRLLLLVTSHPEPSVSEYALPFWYELAKAGGRRAGDGGSPGVGERYASILQELLRALVERMVYPPEAGEGGREGGGWDEEEKEEFDDFRYKLGDAVKDVSSLLGPSPCL-HALAHLLHATLSTPTPSLPPSHPPSWRQTEACLWALRSLAPSLPLPPSLPSSAPLD-TDTTTALTVVPQLLSLLLSQASPSSPSALSLPPLLRVTIHHVVGRLAPFLPPHPPSSTTDLLPFA-----YPLLLADLGSPAASASAARALQEVLLACGRVTGPDSLPPLTLFGQIYTASLAGQLSFGNETLVVEGILEGVVARMGGEGGGEGGREGGREEVV---QRMVGMVGEHLGDVVRKEQ 482
            +  W++   D    P  +V N +   A  V+  G   N    LF +AVD++I++  A+  +  +       + + Q+L+P +  L+P +            A  + + +TD   G+  +F EMA  YL L+LS  P  Q A++ +LL   ++P+  ++E  +PFW+    A       G    +   +   L  L    ++ M +     +G RE      ++K++F +FR  LGD ++D   LLG    L H +  L     S  +P         W   EA L++ RS+A  + L   + S +  D T   +  + +PQ          P  P+       ++ T   ++ R A +L     S    +L F        L   D        + +  L+ + + C +  G D      L         +  L   ++ +++EGI +GV               G R+ +V   Q +V  + +H+ ++  ++ 
Sbjct:  165 LAEWINMLDDTTRDPELVVPNPVANAALQVLRNGMDDNT--ELFDAAVDVVIEIIRAFPSAERD-------MHVIQWLLPQLMGLKPLF------------AEAAAYDNTDCCIGLTRIFTEMAEMYLNLILSESPMNQTAVVDMLLDCMAYPDAEIAEITMPFWFVFCDALISSRDPGTKARLLATFTPSLTRLSLICMQNMCF----RDGFRELPS---DKKQDFKNFRADLGDILRDCCHLLGAELVLQHCVQGLQTIFQSQESPE------RQWEAIEAHLYSFRSIARKVEL--QIQSRSNFDETPLHSIFSYLPQF---------PDHPA-------IKYTSCLIISRYAEWLGTSATSYLPSMLQFIDATIQQCLSRKDYQEWQVPTAVSAGLRSLCIDCWKHVGRD------LIEYYVRLQASDALLVEDQVILLEGICKGVSI-------------GDRQLMVPAMQTLVTPIAQHMSEIFARDH 587          
The following BLAST results are available for this feature:
BLAST of EWM23595.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585104736|gb|EWM23595.1|0.000e+0100.00conserved unknown protein [Nannochloropsis gaditan... [more]
gi|299116889|emb|CBN74999.1|1.088e-3425.81conserved unknown protein [Ectocarpus siliculosus][more]
gi|673040257|ref|XP_008874089.1|1.724e-2126.52hypothetical protein H310_09716 [Aphanomyces invad... [more]
gi|698820255|ref|XP_009843156.1|1.024e-1926.15hypothetical protein H257_16424 [Aphanomyces astac... [more]
gi|698820257|ref|XP_009843157.1|1.414e-1925.83hypothetical protein, variant 1 [Aphanomyces astac... [more]
gi|698820259|ref|XP_009843158.1|1.963e-1925.83hypothetical protein, variant 2 [Aphanomyces astac... [more]
gi|1069921247|ref|XP_018272815.1|1.301e-1825.81hypothetical protein RHOBADRAFT_51763 [Rhodotorula... [more]
gi|1046774750|gb|OCK83054.1|1.810e-1826.28ARM repeat-containing protein [Lepidopterella palu... [more]
gi|576994648|gb|EUC67243.1|1.002e-1724.58mRNA transport regulator [Rhizoctonia solani AG-3 ... [more]
gi|813161747|ref|XP_012202603.1|6.883e-1722.06hypothetical protein SPRG_20517 [Saprolegnia paras... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7086rna7086Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications