EWM23608.1, cds7062 (CDS) Nannochloropsis gaditana

Overview
NameEWM23608.1
Unique Namecds7062
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002470.1:396874..397338 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM23608.1
Productprotein phosphatase inhibitor
Orig transcript idgnl|cribi|Naga_100550g4.5012.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:396874..397338 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0030234enzyme regulator activity
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
Vocabulary: INTERPRO
TermDefinition
IPR011107PPI_Ypi1
Homology
BLAST of EWM23608.1 vs. NCBI_GenBank
Match: gi|585104755|gb|EWM23608.1| (protein phosphatase inhibitor [Nannochloropsis gaditana])

HSP 1 Score: 313.153 bits (801), Expect = 5.680e-108
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0
Query:    1 MEAKDSTRARSSTDGDGSGGNSGAHSQAKPISSGSRTVVEEKAAAKEGREDRVLRLQLDPRPHVKWDQDVVDNEHMNKKSSKRCCIFHKKRAFGESSSESESEDDGEQGSDEEEGGGNNGEGKGKGGRGKRKDRHMHVAQPKHLPIKPHETYHA 154
            MEAKDSTRARSSTDGDGSGGNSGAHSQAKPISSGSRTVVEEKAAAKEGREDRVLRLQLDPRPHVKWDQDVVDNEHMNKKSSKRCCIFHKKRAFGESSSESESEDDGEQGSDEEEGGGNNGEGKGKGGRGKRKDRHMHVAQPKHLPIKPHETYHA
Sbjct:    1 MEAKDSTRARSSTDGDGSGGNSGAHSQAKPISSGSRTVVEEKAAAKEGREDRVLRLQLDPRPHVKWDQDVVDNEHMNKKSSKRCCIFHKKRAFGESSSESESEDDGEQGSDEEEGGGNNGEGKGKGGRGKRKDRHMHVAQPKHLPIKPHETYHA 154          
BLAST of EWM23608.1 vs. NCBI_GenBank
Match: gi|397617904|gb|EJK64663.1| (hypothetical protein THAOC_14580, partial [Thalassiosira oceanica])

HSP 1 Score: 80.1073 bits (196), Expect = 3.737e-16
Identity = 36/56 (64.29%), Postives = 47/56 (83.93%), Query Frame = 0
Query:   53 VLRLQLDPRPHVKWDQDVVDNEHMNKKSSKRCCIFHKKRAFGESSSESESEDDGEQ 108
            VLRLQL P+ +V W+ DV+DNE + +KSSKRCCI+HK+RAFGESS+ES   DDG++
Sbjct:   54 VLRLQLRPQSNVSWETDVIDNEGLGRKSSKRCCIWHKQRAFGESSTES---DDGDE 106          
BLAST of EWM23608.1 vs. NCBI_GenBank
Match: gi|975108082|ref|XP_015269520.1| (PREDICTED: protein phosphatase 1 regulatory subunit 11 isoform X2 [Gekko japonicus])

HSP 1 Score: 77.0258 bits (188), Expect = 2.711e-15
Identity = 48/105 (45.71%), Postives = 60/105 (57.14%), Query Frame = 0
Query:   35 SRTVVEEKAAAKEGREDRVLRLQL---DPRPHVKWDQDVVDNEHMNKKSSKRCCIFHKKRAFGESSSESESEDDGEQGSDEEEGGGNNGEGKG--KGGRGKRKDR 134
            S   V   A   E  E+R L ++L    P   V+W  D VDNEH+ ++SSK CCI+ K RAFGESS+ESE EDD        EG GN    +G  KG RGK +D+
Sbjct:    4 STASVGATATVTETEENRSLTIKLRKRKPAKKVEWSSDTVDNEHLGRRSSKCCCIYEKPRAFGESSTESEDEDD--------EGCGNAHCIRGHKKGQRGKTQDK 100          
BLAST of EWM23608.1 vs. NCBI_GenBank
Match: gi|1072224052|gb|OEU08804.1| (PPI_Ypi1-domain-containing protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 77.411 bits (189), Expect = 6.344e-15
Identity = 32/49 (65.31%), Postives = 37/49 (75.51%), Query Frame = 0
Query:   47 EGREDRVLRLQLDPRPHVKWDQDVVDNEHMNKKSSKRCCIFHKKRAFGE 95
            +   D VLRL L  RP+V WD+ V+DNE M +KSSKRCCIFHK RAFGE
Sbjct:   82 QSNNDEVLRLTLTSRPNVTWDEGVIDNEGMGRKSSKRCCIFHKARAFGE 130          
BLAST of EWM23608.1 vs. NCBI_GenBank
Match: gi|1210525045|dbj|GAX16237.1| (hypothetical protein FisN_3Hu281 [Fistulifera solaris])

HSP 1 Score: 75.8702 bits (185), Expect = 1.039e-14
Identity = 32/48 (66.67%), Postives = 40/48 (83.33%), Query Frame = 0
Query:   53 VLRLQLDPRPHVKWDQDVVDNEHMNKKSSKRCCIFHKKRAFGESSSES 100
            VLRL L   P V+WD+ +VDNE + +KSSKRCCIFHK+RAFGESS++S
Sbjct:   47 VLRLTLRAPPSVRWDESIVDNEGLGRKSSKRCCIFHKQRAFGESSTDS 94          
BLAST of EWM23608.1 vs. NCBI_GenBank
Match: gi|975108080|ref|XP_015269519.1| (PREDICTED: protein phosphatase 1 regulatory subunit 11 isoform X1 [Gekko japonicus])

HSP 1 Score: 75.485 bits (184), Expect = 1.390e-14
Identity = 45/100 (45.00%), Postives = 57/100 (57.00%), Query Frame = 0
Query:   37 TVVEEKAAAKEGREDRVLRLQLDPRPHVKWDQDVVDNEHMNKKSSKRCCIFHKKRAFGESSSESESEDDGEQGSDEEEGGGNNGEGKG--KGGRGKRKDR 134
            TV E +    E R   +   +  P   V+W  D VDNEH+ ++SSK CCI+ K RAFGESS+ESE EDD        EG GN    +G  KG RGK +D+
Sbjct:   13 TVTETEVIEPENRSLTIKLRKRKPAKKVEWSSDTVDNEHLGRRSSKCCCIYEKPRAFGESSTESEDEDD--------EGCGNAHCIRGHKKGQRGKTQDK 104          
BLAST of EWM23608.1 vs. NCBI_GenBank
Match: gi|219110689|ref|XP_002177096.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217411631|gb|EEC51559.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 75.485 bits (184), Expect = 1.391e-14
Identity = 46/116 (39.66%), Postives = 61/116 (52.59%), Query Frame = 0
Query:   16 DGSGGNSGAHSQAKPISSGSRTVVEEKAAAKEGREDRVLRLQLDPRPHVKWDQDVVDNEHMNKKSSKRCCIFHKKRAFGESSSESESEDDGEQGSDEEEGGGNNGEGKGKGGRGKR 131
            D +GG +   +   P  S + TV +   AA    E   L L L   P V+W+ DV+DNE M +KSSKRCCIFHK+R F ESS++S  +D            GN+   K K  R K+
Sbjct:   30 DSTGGTATVRN---PTGSVTMTVTD---AATTRHEPEPLVLTLQAHPSVRWENDVIDNEGMGRKSSKRCCIFHKQRPFDESSTDSSDQD------------GNDDRDKRKIARPKK 127          
BLAST of EWM23608.1 vs. NCBI_GenBank
Match: gi|1173948007|gb|OQR96172.1| (hypothetical protein ACHHYP_16926 [Achlya hypogyna])

HSP 1 Score: 70.8626 bits (172), Expect = 6.664e-13
Identity = 37/77 (48.05%), Postives = 48/77 (62.34%), Query Frame = 0
Query:   18 SGGNSGAHSQAKPISSGSRTVVEEKAAAKEGREDRVLRLQLDPRPHVKWDQDVVDNEHMNKKSSKRCCIFHKKRAFG 94
            S   S A +  +P  +GS T V   A  +E +E  VL L+L PR HV +D+ VVDNE + +K S +CCIFHKKR FG
Sbjct:    5 STQESNAAAATRP--TGSMTQVS-TAVNEETKESEVLFLRLAPRAHVTFDESVVDNEFLGRKKSNKCCIFHKKREFG 78          
BLAST of EWM23608.1 vs. NCBI_GenBank
Match: gi|1004688658|ref|XP_015745047.1| (PREDICTED: protein phosphatase 1 regulatory subunit 11 isoform X1 [Python bivittatus])

HSP 1 Score: 70.0922 bits (170), Expect = 1.235e-12
Identity = 42/90 (46.67%), Postives = 53/90 (58.89%), Query Frame = 0
Query:   50 EDRVLRLQL---DPRPHVKWDQDVVDNEHMNKKSSKRCCIFHKKRAFGESSSESESEDDGEQGSDEEEGGGN----NGEGKGKGGRGKRK 132
            E+R L ++L    P   V+W  D VDNEH+ ++SSK CCI+ K RAFGESS+ESE EDD        EG GN     G  KG  G+ + K
Sbjct:   23 ENRSLTIKLRKRKPSKKVEWSSDTVDNEHLGRRSSKCCCIYEKPRAFGESSTESEDEDD--------EGCGNAHCIRGHKKGLQGKAQSK 104          
BLAST of EWM23608.1 vs. NCBI_GenBank
Match: gi|669156004|ref|XP_008613564.1| (hypothetical protein SDRG_09410 [Saprolegnia diclina VS20] >gi|530734636|gb|EQC32878.1| hypothetical protein SDRG_09410 [Saprolegnia diclina VS20])

HSP 1 Score: 69.707 bits (169), Expect = 2.846e-12
Identity = 36/72 (50.00%), Postives = 43/72 (59.72%), Query Frame = 0
Query:   23 GAHSQAKPISSGSRTVVEEKAAAKEGREDRVLRLQLDPRPHVKWDQDVVDNEHMNKKSSKRCCIFHKKRAFG 94
            G H       +GS+T V    AA E R   VLRL+L PR HV +D   VDNE + +K S +CCIFHKKR FG
Sbjct:   30 GVHEVQATAPAGSQTQVA--TAAHEARAQEVLRLRLAPRAHVSFDDSAVDNEFLGRKKSNKCCIFHKKREFG 99          
The following BLAST results are available for this feature:
BLAST of EWM23608.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585104755|gb|EWM23608.1|5.680e-108100.00protein phosphatase inhibitor [Nannochloropsis gad... [more]
gi|397617904|gb|EJK64663.1|3.737e-1664.29hypothetical protein THAOC_14580, partial [Thalass... [more]
gi|975108082|ref|XP_015269520.1|2.711e-1545.71PREDICTED: protein phosphatase 1 regulatory subuni... [more]
gi|1072224052|gb|OEU08804.1|6.344e-1565.31PPI_Ypi1-domain-containing protein [Fragilariopsis... [more]
gi|1210525045|dbj|GAX16237.1|1.039e-1466.67hypothetical protein FisN_3Hu281 [Fistulifera sola... [more]
gi|975108080|ref|XP_015269519.1|1.390e-1445.00PREDICTED: protein phosphatase 1 regulatory subuni... [more]
gi|219110689|ref|XP_002177096.1|1.391e-1439.66predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|1173948007|gb|OQR96172.1|6.664e-1348.05hypothetical protein ACHHYP_16926 [Achlya hypogyna... [more]
gi|1004688658|ref|XP_015745047.1|1.235e-1246.67PREDICTED: protein phosphatase 1 regulatory subuni... [more]
gi|669156004|ref|XP_008613564.1|2.846e-1250.00hypothetical protein SDRG_09410 [Saprolegnia dicli... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7079rna7079Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications