EWM23622.1, cds7049 (CDS) Nannochloropsis gaditana

Overview
NameEWM23622.1
Unique Namecds7049
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002470.1:366382..367305 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM23622.1
ProductNAD(P)-binding domain protein
Orig transcript idgnl|cribi|Naga_100137g15.24.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:366382..367305 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR016040NAD(P)-bd_dom
Homology
BLAST of EWM23622.1 vs. NCBI_GenBank
Match: gi|585104773|gb|EWM23622.1| (NAD(P)-binding domain protein [Nannochloropsis gaditana])

HSP 1 Score: 616.305 bits (1588), Expect = 0.000e+0
Identity = 307/307 (100.00%), Postives = 307/307 (100.00%), Query Frame = 0
Query:    1 MFTEHGSGRRFSMEQAIIKSARRIQSSLLSTAGRWSGVTGASRRLTTSATSNSSDTSTMQEDSPPSAAKVVVLGGSGYVGQHVLQAALYRGADAVSINRSGIPNTSGSWLSQVKWVAADIFNSSAWSKELEGATGVVSCIGAFGSNEFMEKINGDANVLAAEVAAKMEVPHFVYVSTVENNLPDFLLKGYFHGKRRAEEAVLSSFPGGRGLVLRPSFVYGTRAVGPLSLPLAVVGRPLEVLFRFPPFPSLRQTLPGTQALLAPPVAVQAVASVAAAGAMGDARVKAGEGAREGVLSVDDIVRVAREV 307
            MFTEHGSGRRFSMEQAIIKSARRIQSSLLSTAGRWSGVTGASRRLTTSATSNSSDTSTMQEDSPPSAAKVVVLGGSGYVGQHVLQAALYRGADAVSINRSGIPNTSGSWLSQVKWVAADIFNSSAWSKELEGATGVVSCIGAFGSNEFMEKINGDANVLAAEVAAKMEVPHFVYVSTVENNLPDFLLKGYFHGKRRAEEAVLSSFPGGRGLVLRPSFVYGTRAVGPLSLPLAVVGRPLEVLFRFPPFPSLRQTLPGTQALLAPPVAVQAVASVAAAGAMGDARVKAGEGAREGVLSVDDIVRVAREV
Sbjct:    1 MFTEHGSGRRFSMEQAIIKSARRIQSSLLSTAGRWSGVTGASRRLTTSATSNSSDTSTMQEDSPPSAAKVVVLGGSGYVGQHVLQAALYRGADAVSINRSGIPNTSGSWLSQVKWVAADIFNSSAWSKELEGATGVVSCIGAFGSNEFMEKINGDANVLAAEVAAKMEVPHFVYVSTVENNLPDFLLKGYFHGKRRAEEAVLSSFPGGRGLVLRPSFVYGTRAVGPLSLPLAVVGRPLEVLFRFPPFPSLRQTLPGTQALLAPPVAVQAVASVAAAGAMGDARVKAGEGAREGVLSVDDIVRVAREV 307          
BLAST of EWM23622.1 vs. NCBI_GenBank
Match: gi|553183400|ref|XP_005853892.1| (hypothetical protein NGA_2070800, partial [Nannochloropsis gaditana CCMP526] >gi|422295169|gb|EKU22468.1| hypothetical protein NGA_2070800, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 412.535 bits (1059), Expect = 6.202e-144
Identity = 204/205 (99.51%), Postives = 204/205 (99.51%), Query Frame = 0
Query:   99 RSGIPNTSGSWLSQVKWVAADIFNSSAWSKELEGATGVVSCIGAFGSNEFMEKINGDANVLAAEVAAKMEVPHFVYVSTVENNLPDFLLKGYFHGKRRAEEAVLSSFPGGRGLVLRPSFVYGTRAVGPLSLPLAVVGRPLEVLFRFPPFPSLRQTLPGTQALLAPPVAVQAVASVAAAGAMGDARVKAGEGAREGVLSVDDIVRV 303
            RSGIPNTSGSWLSQVKWVAADIFNSSAWSKELEGATGVVSCIGAFGSNEFMEKINGDANVLAAEVAAKMEVPHFVYVSTVENNLPDFLLKGYFHGKRRAEEAVLSSFPGGRGLVLRPSFVYGTRAVGPLSLPLAVVGRPLEVLFRFPPFPSLRQTLPGTQALLAPPVAVQAVASVAAAGAMGDARVKAGEG REGVLSVDDIVRV
Sbjct:    1 RSGIPNTSGSWLSQVKWVAADIFNSSAWSKELEGATGVVSCIGAFGSNEFMEKINGDANVLAAEVAAKMEVPHFVYVSTVENNLPDFLLKGYFHGKRRAEEAVLSSFPGGRGLVLRPSFVYGTRAVGPLSLPLAVVGRPLEVLFRFPPFPSLRQTLPGTQALLAPPVAVQAVASVAAAGAMGDARVKAGEGTREGVLSVDDIVRV 205          
BLAST of EWM23622.1 vs. NCBI_GenBank
Match: gi|299471046|emb|CBN78906.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 208.764 bits (530), Expect = 3.373e-63
Identity = 119/240 (49.58%), Postives = 162/240 (67.50%), Query Frame = 0
Query:   69 KVVVLGGSGYVGQHVLQAALYRGADAVSINRSGIPN-TSGSWLSQVKWVAADIFNSSAWSKELEGATGVVSCIGAFGSNEFMEKINGDANVLAAEVAAKMEVPHFVYVSTVENNLPDFLLKGYFHGKRRAEEAVLSSFPGGRGLVLRPSFVYGTRAVGPLSLPLAVVGRPLEVLFRFPPFPSLRQTLPGTQALLAPPVAVQAVASVAAAGAMGDARVKAGEGAREGVLSVDDIVRVAREV 307
            +V+V GGSG+VGQ+V QAAL  GAD VS+NRSG P     +W  +V+WV ADIF    ++ EL GA GVVSC+GAFGS++ +EKI GDA V A E A K +V  FV++S         ++KGY+ GK++AE+A+L  FP G G+VLR   +YG R VGP+++PL  + RP+E+LF   PF ++R + P  +A+L PPVAV+ V+ VAAAGA+G   +  G     GVL VDDI R+A + 
Sbjct:    9 QVIVFGGSGFVGQNVCQAALRMGADVVSVNRSGAPTGKDKAWKDKVRWVQADIFKPEDYAVELSGAAGVVSCVGAFGSDQQVEKICGDATVAATEAAEKADVERFVFISAAGAQHDHPVMKGYWKGKQKAEKAILERFPDG-GVVLRAPGIYGDRDVGPVTIPLGALMRPMEMLFNLAPFAAVRSSSP-LEAMLTPPVAVENVSRVAAAGALG---LVPG-----GVLLVDDINRLATDC 238          
BLAST of EWM23622.1 vs. NCBI_GenBank
Match: gi|302793690|ref|XP_002978610.1| (hypothetical protein SELMODRAFT_152670 [Selaginella moellendorffii] >gi|300153959|gb|EFJ20596.1| hypothetical protein SELMODRAFT_152670 [Selaginella moellendorffii])

HSP 1 Score: 198.749 bits (504), Expect = 5.148e-59
Identity = 110/240 (45.83%), Postives = 153/240 (63.75%), Query Frame = 0
Query:   68 AKVVVLGGSGYVGQHVLQAALYRGADAVSINRSGIPNTSGSWLSQVKWVAADIFNSSAWSKELEGATGVVSCIGAFGSNEFMEKINGDANVLAAEVAAKMEVPHFVYVSTVENNLPDFLLK--GYFHGKRRAEEAVLSSFPGGRGLVLRPSFVYGTRAVGPLSLPLAVVGRPLE-VLFRFPPFPSLRQTLPGTQALLAPPVAVQAVASVAAAGAMGDARVKAGEGAREGVLSVDDIVRVA 304
            AKVVVLGGSG+VG  V +AA+ +G D  S++RSG P+    W+ QV WV+ ++F +  W+  L+GAT V+S IG FG+NE MEKING+AN++A   A K  +P FVYVS  + NLP F+L   GYF GKR+AE  VLS FP G G VLRP F+YG R +  + +PL ++G+PL+  L     F S  +++PG+  LL+ PV+V+ VA  A    + D+          GVL+++ I   A
Sbjct:   21 AKVVVLGGSGFVGSSVCKAAIAQGIDVTSLSRSGKPSYPDPWVDQVLWVSGNVFYAD-WNSLLKGATAVISTIGGFGTNEEMEKINGEANIVAVGEACKAGIPKFVYVSVHDYNLPFFVLNSLGYFTGKRKAEAEVLSKFP-GSGTVLRPGFIYGKRRINGVDVPLDIIGKPLDKFLTSAENFISPLKSIPGSDVLLSAPVSVEDVAGAAVKAVLDDSIF--------GVLTIEQIKEAA 250          
BLAST of EWM23622.1 vs. NCBI_GenBank
Match: gi|224284460|gb|ACN39964.1| (unknown [Picea sitchensis])

HSP 1 Score: 200.29 bits (508), Expect = 7.877e-59
Identity = 105/205 (51.22%), Postives = 135/205 (65.85%), Query Frame = 0
Query:   69 KVVVLGGSGYVGQHVLQAALYRGADAVSINRSGIPNTSGSWLSQVKWVAADIFNSSAWSKELEGATGVVSCIGAFGSNEFMEKINGDANVLAAEVAAKMEVPHFVYVSTVENNLPDFLLK-GYFHGKRRAEEAVLSSFPGGRGLVLRPSFVYGTRAVGPLSLPLAVVGRPLE-VLFRFPPFPSLRQTLPGTQALLAPPVAVQAVA 271
            K++VLGGSG+VG  + +AA+ RG +AVS++R G P    SW+ QV WVA D+F +  W   L GAT VVS +G FG+NE MEKING+ANVLA + A+K  +P F+ +S  + NLP FLL  GYF GKRRAE  VLS +P   G VLRP F+YG R V    +PL ++G+PLE  L     F     +LPG+   LAPPV+V  VA
Sbjct:   88 KIIVLGGSGFVGSAICKAAVARGIEAVSLSRLGRPTYIDSWVDQVTWVAGDVFYAD-WDGLLRGATAVVSTLGGFGTNEQMEKINGEANVLAVDAASKAGIPKFILISVHDYNLPSFLLNSGYFSGKRRAETEVLSKYPNS-GTVLRPGFIYGKRKVNGFEIPLDLIGQPLEKFLLASENFTRGLSSLPGSDLFLAPPVSVDDVA 290          
BLAST of EWM23622.1 vs. NCBI_GenBank
Match: gi|116781236|gb|ABK22018.1| (unknown [Picea sitchensis])

HSP 1 Score: 200.29 bits (508), Expect = 8.048e-59
Identity = 105/205 (51.22%), Postives = 135/205 (65.85%), Query Frame = 0
Query:   69 KVVVLGGSGYVGQHVLQAALYRGADAVSINRSGIPNTSGSWLSQVKWVAADIFNSSAWSKELEGATGVVSCIGAFGSNEFMEKINGDANVLAAEVAAKMEVPHFVYVSTVENNLPDFLLK-GYFHGKRRAEEAVLSSFPGGRGLVLRPSFVYGTRAVGPLSLPLAVVGRPLE-VLFRFPPFPSLRQTLPGTQALLAPPVAVQAVA 271
            K++VLGGSG+VG  + +AA+ RG +AVS++R G P    SW+ QV WVA D+F +  W   L GAT VVS +G FG+NE MEKING+ANVLA + A+K  +P F+ +S  + NLP FLL  GYF GKRRAE  VLS +P   G VLRP F+YG R V    +PL ++G+PLE  L     F     +LPG+   LAPPV+V  VA
Sbjct:   88 KIIVLGGSGFVGSAICKAAVARGIEAVSLSRLGRPTYIDSWVDQVTWVAGDVFYAD-WDGLLRGATAVVSTLGGFGTNEQMEKINGEANVLAVDAASKAGIPKFILISVHDYNLPSFLLNSGYFSGKRRAETEVLSKYPNS-GTVLRPGFIYGKRKVNGFEIPLDLIGQPLEKFLLASENFTRGLSSLPGSDLFLAPPVSVDDVA 290          
BLAST of EWM23622.1 vs. NCBI_GenBank
Match: gi|302774226|ref|XP_002970530.1| (hypothetical protein SELMODRAFT_93869 [Selaginella moellendorffii] >gi|300162046|gb|EFJ28660.1| hypothetical protein SELMODRAFT_93869 [Selaginella moellendorffii])

HSP 1 Score: 196.438 bits (498), Expect = 2.820e-58
Identity = 108/242 (44.63%), Postives = 154/242 (63.64%), Query Frame = 0
Query:   66 SAAKVVVLGGSGYVGQHVLQAALYRGADAVSINRSGIPNTSGSWLSQVKWVAADIFNSSAWSKELEGATGVVSCIGAFGSNEFMEKINGDANVLAAEVAAKMEVPHFVYVSTVENNLPDFLLK--GYFHGKRRAEEAVLSSFPGGRGLVLRPSFVYGTRAVGPLSLPLAVVGRPLE-VLFRFPPFPSLRQTLPGTQALLAPPVAVQAVASVAAAGAMGDARVKAGEGAREGVLSVDDIVRVA 304
             +++VVVLGGSG+VG  V +AA+ +G D  S++RSG P+    W+ QV WV+ ++F +  W+  L+GAT V+S IG FG+NE MEKING+AN++A   A K  +P FVYVS  + NLP F+L   GYF GKR+AE  VLS FP G G VLRP F+YG R +  + +PL ++G+PL+  L     F S  +++PG+  LL+ PV+V+ VA  A    + D+          GVL+++ I   A
Sbjct:    7 CSSQVVVLGGSGFVGSSVCKAAIAQGIDVTSLSRSGKPSYPDPWVDQVLWVSGNVFYAD-WNSLLKGATAVISTIGGFGTNEEMEKINGEANIIAVGEACKAGIPKFVYVSVHDYNLPFFVLNSLGYFTGKRKAEAEVLSKFP-GSGTVLRPGFIYGKRRINGVDVPLDIIGKPLDKFLTSAENFISPLKSIPGSDVLLSAPVSVEDVAGAAVKAVLDDSIF--------GVLTIEQIKEAA 238          
BLAST of EWM23622.1 vs. NCBI_GenBank
Match: gi|743861977|ref|XP_010943422.1| (PREDICTED: uncharacterized protein At1g32220, chloroplastic [Elaeis guineensis])

HSP 1 Score: 197.593 bits (501), Expect = 6.694e-58
Identity = 111/242 (45.87%), Postives = 149/242 (61.57%), Query Frame = 0
Query:   44 RLTTSATSNSSDTSTMQED--SPPSAAKVVVLGGSGYVGQHVLQAALYRGADAVSINRSGIPNTSGSWLSQVKWVAADIFNSSAWSKELEGATGVVSCIGAFGSNEFMEKINGDANVLAAEVAAKMEVPHFVYVSTVENNLPDFLLK-GYFHGKRRAEEAVLSSFPGGRGLVLRPSFVYGTRAVGPLSLPLAVVGRPLE-VLFRFPPFPSLRQTLPGTQALLAPPVAVQAVASVAAAGAMGD 281
            R + +A+    D+S++  D  +     K+VVLGGSG+VG  + +AA+ +G + VS++RSG P+ S SW  QV W+A D+F +  W + L GAT VVS +G FGS E M+KING+AN+LA   A    VP F+ +S  + NLP FLL  GYF GKR+AE  VLS +P   G+VLRP F+YG R V    +PL V+G PLE +L     F     +LP +  LLAPPV+V  VA  A    M D
Sbjct:   51 RCSYAASDIREDSSSVPIDVVANVKTEKIVVLGGSGFVGSAICKAAVSKGIEVVSLSRSGRPSYSDSWTDQVTWMAGDVFYAR-WDEVLVGATAVVSTLGGFGSEEQMKKINGEANILAVGAAKDFGVPKFIMISVHDYNLPSFLLTLGYFTGKRKAESEVLSKYPSS-GVVLRPGFIYGKRKVDGFEIPLDVIGEPLERLLLAVENFTKPLSSLPASDLLLAPPVSVDDVAYAAINAVMDD 290          
BLAST of EWM23622.1 vs. NCBI_GenBank
Match: gi|1111032714|ref|XP_019267611.1| (PREDICTED: uncharacterized protein At1g32220, chloroplastic-like [Nicotiana attenuata] >gi|1102287625|gb|OIT34252.1| uncharacterized protein, chloroplastic [Nicotiana attenuata])

HSP 1 Score: 196.823 bits (499), Expect = 7.117e-58
Identity = 114/292 (39.04%), Postives = 170/292 (58.22%), Query Frame = 0
Query:   21 ARRIQSSLLSTAGRWSGVTGASRRLTTSATSNSSDTSTMQEDS------PPSAAKVVVLGGSGYVGQHVLQAALYRGADAVSINRSGIPNTSGSWLSQVKWVAADIFNSSAWSKELEGATGVVSCIGAFGSNEFMEKINGDANVLAAEVAAKMEVPHFVYVSTVENNLPDFLLKGYFHGKRRAEEAVLSSFPGGRGLVLRPSFVYGTRAVGPLSLPLAVVGRPLEVLFRFPPFPSLRQTLPGTQALLAPPVAVQAVASVAAAGAMGDARVKAGEGAREGVLSVDDIVRVARE 306
            +R I++ L  +  R+S VT +      S  SN +D     E++      PP   K++VLGG+G+VG HVL+ AL RG    S++R+G  +   SW + V W   ++ ++ +WS  L+G T V+SC+G FGSN +M KING AN+ A   A++  V  FVY+S V+  L ++LL+GY+ GKR AE  +L+ +P G G++LRP F+YGTR VG + LPL V+G PL+++ +     SL Q +P    L  PPV V +VA VA   A              GV+ V  I+R +++
Sbjct:    2 SRLIEARL--SLSRFSSVTSSRNLRFLSTESNKTDEPFRVEEAETVNVPPPPTEKLLVLGGNGFVGSHVLKEALDRGLAVASLSRTGRSSIQESWANNVSWHQGNLLSTDSWSDALKGVTSVISCVGGFGSNSYMYKINGTANINAIRAASEEGVKRFVYISAVDFGLANYLLQGYYEGKRAAETELLTRYPYG-GVILRPGFIYGTRRVGSMKLPLGVIGSPLQMILQHA--KSLSQ-IPLVGPLFIPPVNVTSVAKVAVRAATDPV-------FPPGVIDVHGILRYSQQ 280          
BLAST of EWM23622.1 vs. NCBI_GenBank
Match: gi|697105541|ref|XP_009606584.1| (PREDICTED: uncharacterized protein At1g32220, chloroplastic isoform X1 [Nicotiana tomentosiformis] >gi|1025151720|ref|XP_016473327.1| PREDICTED: uncharacterized protein At1g32220, chloroplastic-like isoform X1 [Nicotiana tabacum])

HSP 1 Score: 196.052 bits (497), Expect = 2.610e-57
Identity = 98/205 (47.80%), Postives = 140/205 (68.29%), Query Frame = 0
Query:   69 KVVVLGGSGYVGQHVLQAALYRGADAVSINRSGIPNTSGSWLSQVKWVAADIFNSSAWSKELEGATGVVSCIGAFGSNEFMEKINGDANVLAAEVAAKMEVPHFVYVSTVENNLPDFLLK-GYFHGKRRAEEAVLSSFPGGRGLVLRPSFVYGTRAVGPLSLPLAVVGRPLEVLFR-FPPFPSLRQTLPGTQALLAPPVAVQAVA 271
            ++VV+GGSG+VG  + +AA+ +G +A+S++RSG P+ SG W+ QV W+A D+F ++ W + L GAT V+S +G FGS+E M++ING+ANV+A   A    +P F+ +S  E NLP FLL+ GYF GKR+AE  VLS +P   G+VLRP+F+YG R V    +PL ++G PLE + R    F     +LP +  LLAPPV+V  VA
Sbjct:   77 RIVVIGGSGFVGSAICKAAVSKGIEAISLSRSGRPSYSGPWVDQVTWMAGDVFYAN-WDEVLVGATAVISTLGGFGSDEQMQRINGEANVVAVNAAKDYGIPKFILISVHEYNLPSFLLQSGYFTGKRKAESEVLSKYPNS-GVVLRPAFIYGKRKVDGFEIPLDLIGEPLEKILRATESFTKPLSSLPASDLLLAPPVSVDDVA 279          
The following BLAST results are available for this feature:
BLAST of EWM23622.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585104773|gb|EWM23622.1|0.000e+0100.00NAD(P)-binding domain protein [Nannochloropsis gad... [more]
gi|553183400|ref|XP_005853892.1|6.202e-14499.51hypothetical protein NGA_2070800, partial [Nannoch... [more]
gi|299471046|emb|CBN78906.1|3.373e-6349.58conserved unknown protein [Ectocarpus siliculosus][more]
gi|302793690|ref|XP_002978610.1|5.148e-5945.83hypothetical protein SELMODRAFT_152670 [Selaginell... [more]
gi|224284460|gb|ACN39964.1|7.877e-5951.22unknown [Picea sitchensis][more]
gi|116781236|gb|ABK22018.1|8.048e-5951.22unknown [Picea sitchensis][more]
gi|302774226|ref|XP_002970530.1|2.820e-5844.63hypothetical protein SELMODRAFT_93869 [Selaginella... [more]
gi|743861977|ref|XP_010943422.1|6.694e-5845.87PREDICTED: uncharacterized protein At1g32220, chlo... [more]
gi|1111032714|ref|XP_019267611.1|7.117e-5839.04PREDICTED: uncharacterized protein At1g32220, chlo... [more]
gi|697105541|ref|XP_009606584.1|2.610e-5747.80PREDICTED: uncharacterized protein At1g32220, chlo... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7066rna7066Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications