EWM23622.1, cds7049 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23622.1 vs. NCBI_GenBank
Match: gi|585104773|gb|EWM23622.1| (NAD(P)-binding domain protein [Nannochloropsis gaditana]) HSP 1 Score: 616.305 bits (1588), Expect = 0.000e+0 Identity = 307/307 (100.00%), Postives = 307/307 (100.00%), Query Frame = 0
Query: 1 MFTEHGSGRRFSMEQAIIKSARRIQSSLLSTAGRWSGVTGASRRLTTSATSNSSDTSTMQEDSPPSAAKVVVLGGSGYVGQHVLQAALYRGADAVSINRSGIPNTSGSWLSQVKWVAADIFNSSAWSKELEGATGVVSCIGAFGSNEFMEKINGDANVLAAEVAAKMEVPHFVYVSTVENNLPDFLLKGYFHGKRRAEEAVLSSFPGGRGLVLRPSFVYGTRAVGPLSLPLAVVGRPLEVLFRFPPFPSLRQTLPGTQALLAPPVAVQAVASVAAAGAMGDARVKAGEGAREGVLSVDDIVRVAREV 307
MFTEHGSGRRFSMEQAIIKSARRIQSSLLSTAGRWSGVTGASRRLTTSATSNSSDTSTMQEDSPPSAAKVVVLGGSGYVGQHVLQAALYRGADAVSINRSGIPNTSGSWLSQVKWVAADIFNSSAWSKELEGATGVVSCIGAFGSNEFMEKINGDANVLAAEVAAKMEVPHFVYVSTVENNLPDFLLKGYFHGKRRAEEAVLSSFPGGRGLVLRPSFVYGTRAVGPLSLPLAVVGRPLEVLFRFPPFPSLRQTLPGTQALLAPPVAVQAVASVAAAGAMGDARVKAGEGAREGVLSVDDIVRVAREV
Sbjct: 1 MFTEHGSGRRFSMEQAIIKSARRIQSSLLSTAGRWSGVTGASRRLTTSATSNSSDTSTMQEDSPPSAAKVVVLGGSGYVGQHVLQAALYRGADAVSINRSGIPNTSGSWLSQVKWVAADIFNSSAWSKELEGATGVVSCIGAFGSNEFMEKINGDANVLAAEVAAKMEVPHFVYVSTVENNLPDFLLKGYFHGKRRAEEAVLSSFPGGRGLVLRPSFVYGTRAVGPLSLPLAVVGRPLEVLFRFPPFPSLRQTLPGTQALLAPPVAVQAVASVAAAGAMGDARVKAGEGAREGVLSVDDIVRVAREV 307
BLAST of EWM23622.1 vs. NCBI_GenBank
Match: gi|553183400|ref|XP_005853892.1| (hypothetical protein NGA_2070800, partial [Nannochloropsis gaditana CCMP526] >gi|422295169|gb|EKU22468.1| hypothetical protein NGA_2070800, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 412.535 bits (1059), Expect = 6.202e-144 Identity = 204/205 (99.51%), Postives = 204/205 (99.51%), Query Frame = 0
Query: 99 RSGIPNTSGSWLSQVKWVAADIFNSSAWSKELEGATGVVSCIGAFGSNEFMEKINGDANVLAAEVAAKMEVPHFVYVSTVENNLPDFLLKGYFHGKRRAEEAVLSSFPGGRGLVLRPSFVYGTRAVGPLSLPLAVVGRPLEVLFRFPPFPSLRQTLPGTQALLAPPVAVQAVASVAAAGAMGDARVKAGEGAREGVLSVDDIVRV 303
RSGIPNTSGSWLSQVKWVAADIFNSSAWSKELEGATGVVSCIGAFGSNEFMEKINGDANVLAAEVAAKMEVPHFVYVSTVENNLPDFLLKGYFHGKRRAEEAVLSSFPGGRGLVLRPSFVYGTRAVGPLSLPLAVVGRPLEVLFRFPPFPSLRQTLPGTQALLAPPVAVQAVASVAAAGAMGDARVKAGEG REGVLSVDDIVRV
Sbjct: 1 RSGIPNTSGSWLSQVKWVAADIFNSSAWSKELEGATGVVSCIGAFGSNEFMEKINGDANVLAAEVAAKMEVPHFVYVSTVENNLPDFLLKGYFHGKRRAEEAVLSSFPGGRGLVLRPSFVYGTRAVGPLSLPLAVVGRPLEVLFRFPPFPSLRQTLPGTQALLAPPVAVQAVASVAAAGAMGDARVKAGEGTREGVLSVDDIVRV 205
BLAST of EWM23622.1 vs. NCBI_GenBank
Match: gi|299471046|emb|CBN78906.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 208.764 bits (530), Expect = 3.373e-63 Identity = 119/240 (49.58%), Postives = 162/240 (67.50%), Query Frame = 0
Query: 69 KVVVLGGSGYVGQHVLQAALYRGADAVSINRSGIPN-TSGSWLSQVKWVAADIFNSSAWSKELEGATGVVSCIGAFGSNEFMEKINGDANVLAAEVAAKMEVPHFVYVSTVENNLPDFLLKGYFHGKRRAEEAVLSSFPGGRGLVLRPSFVYGTRAVGPLSLPLAVVGRPLEVLFRFPPFPSLRQTLPGTQALLAPPVAVQAVASVAAAGAMGDARVKAGEGAREGVLSVDDIVRVAREV 307
+V+V GGSG+VGQ+V QAAL GAD VS+NRSG P +W +V+WV ADIF ++ EL GA GVVSC+GAFGS++ +EKI GDA V A E A K +V FV++S ++KGY+ GK++AE+A+L FP G G+VLR +YG R VGP+++PL + RP+E+LF PF ++R + P +A+L PPVAV+ V+ VAAAGA+G + G GVL VDDI R+A +
Sbjct: 9 QVIVFGGSGFVGQNVCQAALRMGADVVSVNRSGAPTGKDKAWKDKVRWVQADIFKPEDYAVELSGAAGVVSCVGAFGSDQQVEKICGDATVAATEAAEKADVERFVFISAAGAQHDHPVMKGYWKGKQKAEKAILERFPDG-GVVLRAPGIYGDRDVGPVTIPLGALMRPMEMLFNLAPFAAVRSSSP-LEAMLTPPVAVENVSRVAAAGALG---LVPG-----GVLLVDDINRLATDC 238
BLAST of EWM23622.1 vs. NCBI_GenBank
Match: gi|302793690|ref|XP_002978610.1| (hypothetical protein SELMODRAFT_152670 [Selaginella moellendorffii] >gi|300153959|gb|EFJ20596.1| hypothetical protein SELMODRAFT_152670 [Selaginella moellendorffii]) HSP 1 Score: 198.749 bits (504), Expect = 5.148e-59 Identity = 110/240 (45.83%), Postives = 153/240 (63.75%), Query Frame = 0
Query: 68 AKVVVLGGSGYVGQHVLQAALYRGADAVSINRSGIPNTSGSWLSQVKWVAADIFNSSAWSKELEGATGVVSCIGAFGSNEFMEKINGDANVLAAEVAAKMEVPHFVYVSTVENNLPDFLLK--GYFHGKRRAEEAVLSSFPGGRGLVLRPSFVYGTRAVGPLSLPLAVVGRPLE-VLFRFPPFPSLRQTLPGTQALLAPPVAVQAVASVAAAGAMGDARVKAGEGAREGVLSVDDIVRVA 304
AKVVVLGGSG+VG V +AA+ +G D S++RSG P+ W+ QV WV+ ++F + W+ L+GAT V+S IG FG+NE MEKING+AN++A A K +P FVYVS + NLP F+L GYF GKR+AE VLS FP G G VLRP F+YG R + + +PL ++G+PL+ L F S +++PG+ LL+ PV+V+ VA A + D+ GVL+++ I A
Sbjct: 21 AKVVVLGGSGFVGSSVCKAAIAQGIDVTSLSRSGKPSYPDPWVDQVLWVSGNVFYAD-WNSLLKGATAVISTIGGFGTNEEMEKINGEANIVAVGEACKAGIPKFVYVSVHDYNLPFFVLNSLGYFTGKRKAEAEVLSKFP-GSGTVLRPGFIYGKRRINGVDVPLDIIGKPLDKFLTSAENFISPLKSIPGSDVLLSAPVSVEDVAGAAVKAVLDDSIF--------GVLTIEQIKEAA 250
BLAST of EWM23622.1 vs. NCBI_GenBank
Match: gi|224284460|gb|ACN39964.1| (unknown [Picea sitchensis]) HSP 1 Score: 200.29 bits (508), Expect = 7.877e-59 Identity = 105/205 (51.22%), Postives = 135/205 (65.85%), Query Frame = 0
Query: 69 KVVVLGGSGYVGQHVLQAALYRGADAVSINRSGIPNTSGSWLSQVKWVAADIFNSSAWSKELEGATGVVSCIGAFGSNEFMEKINGDANVLAAEVAAKMEVPHFVYVSTVENNLPDFLLK-GYFHGKRRAEEAVLSSFPGGRGLVLRPSFVYGTRAVGPLSLPLAVVGRPLE-VLFRFPPFPSLRQTLPGTQALLAPPVAVQAVA 271
K++VLGGSG+VG + +AA+ RG +AVS++R G P SW+ QV WVA D+F + W L GAT VVS +G FG+NE MEKING+ANVLA + A+K +P F+ +S + NLP FLL GYF GKRRAE VLS +P G VLRP F+YG R V +PL ++G+PLE L F +LPG+ LAPPV+V VA
Sbjct: 88 KIIVLGGSGFVGSAICKAAVARGIEAVSLSRLGRPTYIDSWVDQVTWVAGDVFYAD-WDGLLRGATAVVSTLGGFGTNEQMEKINGEANVLAVDAASKAGIPKFILISVHDYNLPSFLLNSGYFSGKRRAETEVLSKYPNS-GTVLRPGFIYGKRKVNGFEIPLDLIGQPLEKFLLASENFTRGLSSLPGSDLFLAPPVSVDDVA 290
BLAST of EWM23622.1 vs. NCBI_GenBank
Match: gi|116781236|gb|ABK22018.1| (unknown [Picea sitchensis]) HSP 1 Score: 200.29 bits (508), Expect = 8.048e-59 Identity = 105/205 (51.22%), Postives = 135/205 (65.85%), Query Frame = 0
Query: 69 KVVVLGGSGYVGQHVLQAALYRGADAVSINRSGIPNTSGSWLSQVKWVAADIFNSSAWSKELEGATGVVSCIGAFGSNEFMEKINGDANVLAAEVAAKMEVPHFVYVSTVENNLPDFLLK-GYFHGKRRAEEAVLSSFPGGRGLVLRPSFVYGTRAVGPLSLPLAVVGRPLE-VLFRFPPFPSLRQTLPGTQALLAPPVAVQAVA 271
K++VLGGSG+VG + +AA+ RG +AVS++R G P SW+ QV WVA D+F + W L GAT VVS +G FG+NE MEKING+ANVLA + A+K +P F+ +S + NLP FLL GYF GKRRAE VLS +P G VLRP F+YG R V +PL ++G+PLE L F +LPG+ LAPPV+V VA
Sbjct: 88 KIIVLGGSGFVGSAICKAAVARGIEAVSLSRLGRPTYIDSWVDQVTWVAGDVFYAD-WDGLLRGATAVVSTLGGFGTNEQMEKINGEANVLAVDAASKAGIPKFILISVHDYNLPSFLLNSGYFSGKRRAETEVLSKYPNS-GTVLRPGFIYGKRKVNGFEIPLDLIGQPLEKFLLASENFTRGLSSLPGSDLFLAPPVSVDDVA 290
BLAST of EWM23622.1 vs. NCBI_GenBank
Match: gi|302774226|ref|XP_002970530.1| (hypothetical protein SELMODRAFT_93869 [Selaginella moellendorffii] >gi|300162046|gb|EFJ28660.1| hypothetical protein SELMODRAFT_93869 [Selaginella moellendorffii]) HSP 1 Score: 196.438 bits (498), Expect = 2.820e-58 Identity = 108/242 (44.63%), Postives = 154/242 (63.64%), Query Frame = 0
Query: 66 SAAKVVVLGGSGYVGQHVLQAALYRGADAVSINRSGIPNTSGSWLSQVKWVAADIFNSSAWSKELEGATGVVSCIGAFGSNEFMEKINGDANVLAAEVAAKMEVPHFVYVSTVENNLPDFLLK--GYFHGKRRAEEAVLSSFPGGRGLVLRPSFVYGTRAVGPLSLPLAVVGRPLE-VLFRFPPFPSLRQTLPGTQALLAPPVAVQAVASVAAAGAMGDARVKAGEGAREGVLSVDDIVRVA 304
+++VVVLGGSG+VG V +AA+ +G D S++RSG P+ W+ QV WV+ ++F + W+ L+GAT V+S IG FG+NE MEKING+AN++A A K +P FVYVS + NLP F+L GYF GKR+AE VLS FP G G VLRP F+YG R + + +PL ++G+PL+ L F S +++PG+ LL+ PV+V+ VA A + D+ GVL+++ I A
Sbjct: 7 CSSQVVVLGGSGFVGSSVCKAAIAQGIDVTSLSRSGKPSYPDPWVDQVLWVSGNVFYAD-WNSLLKGATAVISTIGGFGTNEEMEKINGEANIIAVGEACKAGIPKFVYVSVHDYNLPFFVLNSLGYFTGKRKAEAEVLSKFP-GSGTVLRPGFIYGKRRINGVDVPLDIIGKPLDKFLTSAENFISPLKSIPGSDVLLSAPVSVEDVAGAAVKAVLDDSIF--------GVLTIEQIKEAA 238
BLAST of EWM23622.1 vs. NCBI_GenBank
Match: gi|743861977|ref|XP_010943422.1| (PREDICTED: uncharacterized protein At1g32220, chloroplastic [Elaeis guineensis]) HSP 1 Score: 197.593 bits (501), Expect = 6.694e-58 Identity = 111/242 (45.87%), Postives = 149/242 (61.57%), Query Frame = 0
Query: 44 RLTTSATSNSSDTSTMQED--SPPSAAKVVVLGGSGYVGQHVLQAALYRGADAVSINRSGIPNTSGSWLSQVKWVAADIFNSSAWSKELEGATGVVSCIGAFGSNEFMEKINGDANVLAAEVAAKMEVPHFVYVSTVENNLPDFLLK-GYFHGKRRAEEAVLSSFPGGRGLVLRPSFVYGTRAVGPLSLPLAVVGRPLE-VLFRFPPFPSLRQTLPGTQALLAPPVAVQAVASVAAAGAMGD 281
R + +A+ D+S++ D + K+VVLGGSG+VG + +AA+ +G + VS++RSG P+ S SW QV W+A D+F + W + L GAT VVS +G FGS E M+KING+AN+LA A VP F+ +S + NLP FLL GYF GKR+AE VLS +P G+VLRP F+YG R V +PL V+G PLE +L F +LP + LLAPPV+V VA A M D
Sbjct: 51 RCSYAASDIREDSSSVPIDVVANVKTEKIVVLGGSGFVGSAICKAAVSKGIEVVSLSRSGRPSYSDSWTDQVTWMAGDVFYAR-WDEVLVGATAVVSTLGGFGSEEQMKKINGEANILAVGAAKDFGVPKFIMISVHDYNLPSFLLTLGYFTGKRKAESEVLSKYPSS-GVVLRPGFIYGKRKVDGFEIPLDVIGEPLERLLLAVENFTKPLSSLPASDLLLAPPVSVDDVAYAAINAVMDD 290
BLAST of EWM23622.1 vs. NCBI_GenBank
Match: gi|1111032714|ref|XP_019267611.1| (PREDICTED: uncharacterized protein At1g32220, chloroplastic-like [Nicotiana attenuata] >gi|1102287625|gb|OIT34252.1| uncharacterized protein, chloroplastic [Nicotiana attenuata]) HSP 1 Score: 196.823 bits (499), Expect = 7.117e-58 Identity = 114/292 (39.04%), Postives = 170/292 (58.22%), Query Frame = 0
Query: 21 ARRIQSSLLSTAGRWSGVTGASRRLTTSATSNSSDTSTMQEDS------PPSAAKVVVLGGSGYVGQHVLQAALYRGADAVSINRSGIPNTSGSWLSQVKWVAADIFNSSAWSKELEGATGVVSCIGAFGSNEFMEKINGDANVLAAEVAAKMEVPHFVYVSTVENNLPDFLLKGYFHGKRRAEEAVLSSFPGGRGLVLRPSFVYGTRAVGPLSLPLAVVGRPLEVLFRFPPFPSLRQTLPGTQALLAPPVAVQAVASVAAAGAMGDARVKAGEGAREGVLSVDDIVRVARE 306
+R I++ L + R+S VT + S SN +D E++ PP K++VLGG+G+VG HVL+ AL RG S++R+G + SW + V W ++ ++ +WS L+G T V+SC+G FGSN +M KING AN+ A A++ V FVY+S V+ L ++LL+GY+ GKR AE +L+ +P G G++LRP F+YGTR VG + LPL V+G PL+++ + SL Q +P L PPV V +VA VA A GV+ V I+R +++
Sbjct: 2 SRLIEARL--SLSRFSSVTSSRNLRFLSTESNKTDEPFRVEEAETVNVPPPPTEKLLVLGGNGFVGSHVLKEALDRGLAVASLSRTGRSSIQESWANNVSWHQGNLLSTDSWSDALKGVTSVISCVGGFGSNSYMYKINGTANINAIRAASEEGVKRFVYISAVDFGLANYLLQGYYEGKRAAETELLTRYPYG-GVILRPGFIYGTRRVGSMKLPLGVIGSPLQMILQHA--KSLSQ-IPLVGPLFIPPVNVTSVAKVAVRAATDPV-------FPPGVIDVHGILRYSQQ 280
BLAST of EWM23622.1 vs. NCBI_GenBank
Match: gi|697105541|ref|XP_009606584.1| (PREDICTED: uncharacterized protein At1g32220, chloroplastic isoform X1 [Nicotiana tomentosiformis] >gi|1025151720|ref|XP_016473327.1| PREDICTED: uncharacterized protein At1g32220, chloroplastic-like isoform X1 [Nicotiana tabacum]) HSP 1 Score: 196.052 bits (497), Expect = 2.610e-57 Identity = 98/205 (47.80%), Postives = 140/205 (68.29%), Query Frame = 0
Query: 69 KVVVLGGSGYVGQHVLQAALYRGADAVSINRSGIPNTSGSWLSQVKWVAADIFNSSAWSKELEGATGVVSCIGAFGSNEFMEKINGDANVLAAEVAAKMEVPHFVYVSTVENNLPDFLLK-GYFHGKRRAEEAVLSSFPGGRGLVLRPSFVYGTRAVGPLSLPLAVVGRPLEVLFR-FPPFPSLRQTLPGTQALLAPPVAVQAVA 271
++VV+GGSG+VG + +AA+ +G +A+S++RSG P+ SG W+ QV W+A D+F ++ W + L GAT V+S +G FGS+E M++ING+ANV+A A +P F+ +S E NLP FLL+ GYF GKR+AE VLS +P G+VLRP+F+YG R V +PL ++G PLE + R F +LP + LLAPPV+V VA
Sbjct: 77 RIVVIGGSGFVGSAICKAAVSKGIEAISLSRSGRPSYSGPWVDQVTWMAGDVFYAN-WDEVLVGATAVISTLGGFGSDEQMQRINGEANVVAVNAAKDYGIPKFILISVHEYNLPSFLLQSGYFTGKRKAESEVLSKYPNS-GVVLRPAFIYGKRKVDGFEIPLDLIGEPLEKILRATESFTKPLSSLPASDLLLAPPVSVDDVA 279 The following BLAST results are available for this feature:
BLAST of EWM23622.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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