EWM23644.1, cds7040 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23644.1 vs. NCBI_GenBank
Match: gi|585104796|gb|EWM23644.1| (trna pseudouridine synthase mitochondrial [Nannochloropsis gaditana]) HSP 1 Score: 1518.06 bits (3929), Expect = 0.000e+0 Identity = 740/740 (100.00%), Postives = 740/740 (100.00%), Query Frame = 0
Query: 1 MSRGQGGRWRGRNDGASRGADRAWGRGGRGWGRHGKRGRGGWKGDSTNKRKSDESAAEKGGPKRQCFYEDRAPHSGSYAAKQRHENSEDGQDLLGNKKKVAMIIGYCGTDFQGMQMNPGAITIEAELEKAMYEAGCIKEANFGSLQKIGWSRSGRTDKGVHAAAQVVGCKLHVKMKSEENVDENRKEEEENAEGTGKGGANESLHAGKEGEEGWSSMEIVKEGGPPMGAQEDETSDKVKSKCSESAGAGASATGEGGEVSAPVGKVEGREEGGHAPGAVSPSEADGPENISHENTSGGTIAAPFTTLSTSKGDGESEGRPDALSQEPPHRPPPAPDALAAALEATRMAINRQLPPSIRIHGILRATRGFNAKNDCTRRRYCYWLPTFLLAEVEEVGAWLDGCAQQKKKKGGGGKRGEAGGAQGISLNYPQPDLSALRQCFRSRLRVYRASSRQLERLGRTLRKYVGTHKFHNFSIRMSFRSGSVKRYIMAVEMGDPVVVGEDGGEDKGLEWVCVTLTGQAFLLHQIRKMVAVAIMVSRGSAPATLIEDAYQDVMLTLPMAPSEGLYLDKASFALYNQRATQIGQAASLDWEGEEEEEDKGGRAPSLSVGVLRERIRRFLEEEIVGHILRREDKTLVFTKWMYHCRQKYEMGELDAFAARGLTVAEQRSEAPKKQVMAEMMQEREEAARGKRLEQQEGACDEQGKEEEKLLVETDQTELEHENIVHGTEDLEGQVANHQNK 740
MSRGQGGRWRGRNDGASRGADRAWGRGGRGWGRHGKRGRGGWKGDSTNKRKSDESAAEKGGPKRQCFYEDRAPHSGSYAAKQRHENSEDGQDLLGNKKKVAMIIGYCGTDFQGMQMNPGAITIEAELEKAMYEAGCIKEANFGSLQKIGWSRSGRTDKGVHAAAQVVGCKLHVKMKSEENVDENRKEEEENAEGTGKGGANESLHAGKEGEEGWSSMEIVKEGGPPMGAQEDETSDKVKSKCSESAGAGASATGEGGEVSAPVGKVEGREEGGHAPGAVSPSEADGPENISHENTSGGTIAAPFTTLSTSKGDGESEGRPDALSQEPPHRPPPAPDALAAALEATRMAINRQLPPSIRIHGILRATRGFNAKNDCTRRRYCYWLPTFLLAEVEEVGAWLDGCAQQKKKKGGGGKRGEAGGAQGISLNYPQPDLSALRQCFRSRLRVYRASSRQLERLGRTLRKYVGTHKFHNFSIRMSFRSGSVKRYIMAVEMGDPVVVGEDGGEDKGLEWVCVTLTGQAFLLHQIRKMVAVAIMVSRGSAPATLIEDAYQDVMLTLPMAPSEGLYLDKASFALYNQRATQIGQAASLDWEGEEEEEDKGGRAPSLSVGVLRERIRRFLEEEIVGHILRREDKTLVFTKWMYHCRQKYEMGELDAFAARGLTVAEQRSEAPKKQVMAEMMQEREEAARGKRLEQQEGACDEQGKEEEKLLVETDQTELEHENIVHGTEDLEGQVANHQNK
Sbjct: 1 MSRGQGGRWRGRNDGASRGADRAWGRGGRGWGRHGKRGRGGWKGDSTNKRKSDESAAEKGGPKRQCFYEDRAPHSGSYAAKQRHENSEDGQDLLGNKKKVAMIIGYCGTDFQGMQMNPGAITIEAELEKAMYEAGCIKEANFGSLQKIGWSRSGRTDKGVHAAAQVVGCKLHVKMKSEENVDENRKEEEENAEGTGKGGANESLHAGKEGEEGWSSMEIVKEGGPPMGAQEDETSDKVKSKCSESAGAGASATGEGGEVSAPVGKVEGREEGGHAPGAVSPSEADGPENISHENTSGGTIAAPFTTLSTSKGDGESEGRPDALSQEPPHRPPPAPDALAAALEATRMAINRQLPPSIRIHGILRATRGFNAKNDCTRRRYCYWLPTFLLAEVEEVGAWLDGCAQQKKKKGGGGKRGEAGGAQGISLNYPQPDLSALRQCFRSRLRVYRASSRQLERLGRTLRKYVGTHKFHNFSIRMSFRSGSVKRYIMAVEMGDPVVVGEDGGEDKGLEWVCVTLTGQAFLLHQIRKMVAVAIMVSRGSAPATLIEDAYQDVMLTLPMAPSEGLYLDKASFALYNQRATQIGQAASLDWEGEEEEEDKGGRAPSLSVGVLRERIRRFLEEEIVGHILRREDKTLVFTKWMYHCRQKYEMGELDAFAARGLTVAEQRSEAPKKQVMAEMMQEREEAARGKRLEQQEGACDEQGKEEEKLLVETDQTELEHENIVHGTEDLEGQVANHQNK 740
BLAST of EWM23644.1 vs. NCBI_GenBank
Match: gi|553193884|ref|XP_005855852.1| (trna pseudouridine synthase, partial [Nannochloropsis gaditana CCMP526] >gi|422293209|gb|EKU20509.1| trna pseudouridine synthase, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 759.599 bits (1960), Expect = 0.000e+0 Identity = 371/376 (98.67%), Postives = 373/376 (99.20%), Query Frame = 0
Query: 8 RWRGRNDGASRGADRAWGRGGRGWGRHGKRGRGGWKGDSTNKRKSDESAAEKGGPKRQCFYEDRAPHSGSYAAKQRHENSEDGQDLLGNKKKVAMIIGYCGTDFQGMQMNPGAITIEAELEKAMYEAGCIKEANFGSLQKIGWSRSGRTDKGVHAAAQVVGCKLHVKMKSEENVDENRKEEEENAEGTGKGGANESLHAGKEGEEGWSSMEIVKEGGPPMGAQEDETSDKVKSKCSESAGAGASATGEGGEVSAPVGKVEGREEGGHAPGAVSPSEADGPENISHENTSGGTIAAPFTTLSTSKGDGESEGRPDALSQEPPHRPPPAPDALAAALEATRMAINRQLPPSIRIHGILRATRGFNAKNDCTRRRYCYW 383
RWRGR DGASRG DRAWGRGGRGWGRHGKRGRGGWKGDSTNKRKSDESAAE+GGPKRQCFYEDRAPHSGSYAAKQRHEN+EDGQDLLGNKKKVAMIIGYCGTDFQGMQMNPGAITIEAELEKAMYEAGCIKEANFGSLQKIGWSRSGRTDKGVHAAAQVVGCKLHVKMKSEENVDENRKEEEENAEGTGKGGANESLHAGKEGEEGWSSMEIVKEGGPPMGAQEDETSDKVKSKCSESAGAGASATGEGGEVSAPVGKVEGREEGGHAPGAVSPSEA GPENISHENTSGGTIAAPFTTLSTSKGDGESEGRPDALSQEPPHRPPPAPDALAAALEATRMAINRQLPPSIRIHGILRATRGFNAKNDCTRRRYCYW
Sbjct: 1 RWRGRYDGASRGVDRAWGRGGRGWGRHGKRGRGGWKGDSTNKRKSDESAAEEGGPKRQCFYEDRAPHSGSYAAKQRHENAEDGQDLLGNKKKVAMIIGYCGTDFQGMQMNPGAITIEAELEKAMYEAGCIKEANFGSLQKIGWSRSGRTDKGVHAAAQVVGCKLHVKMKSEENVDENRKEEEENAEGTGKGGANESLHAGKEGEEGWSSMEIVKEGGPPMGAQEDETSDKVKSKCSESAGAGASATGEGGEVSAPVGKVEGREEGGHAPGAVSPSEAGGPENISHENTSGGTIAAPFTTLSTSKGDGESEGRPDALSQEPPHRPPPAPDALAAALEATRMAINRQLPPSIRIHGILRATRGFNAKNDCTRRRYCYW 376
BLAST of EWM23644.1 vs. NCBI_GenBank
Match: gi|1026951761|ref|XP_016611550.1| (tRNA pseudouridine synthase A [Spizellomyces punctatus DAOM BR117] >gi|907098137|gb|KND03511.1| tRNA pseudouridine synthase A [Spizellomyces punctatus DAOM BR117]) HSP 1 Score: 170.629 bits (431), Expect = 6.773e-42 Identity = 89/242 (36.78%), Postives = 131/242 (54.13%), Query Frame = 0
Query: 349 INRQLPPSIRIHGILRATRGFNAKNDCTRRRYCYWLPTFLLAEVEEVGAWLDGCAQQKKKKGGGGKRGEAGGAQGISLNYPQPDLSALRQCFRSRLRVYRASSRQLERLGRTLRKYVGTHKFHNFSIRMSFRSGSVKRYIMAVEMGDPVVVGEDGGEDKGLEWVCVTLTGQAFLLHQIRKMVAVAIMVSRGSAPATLIEDAYQDVMLTLPMAPSEGLYLDKASFALYNQRATQIGQAASLDW 590
IN LP IRI G +R R F+AKN C R Y Y+LPT++L V+ L G+ G + L++ +L Q R +R QL+ L L++Y GTH FHNF++ F S RYI++ E DP++ G G+EWV + GQ+F+LHQIRKM+ +AIM+ R PA+L+E +++ L +P AP+ GL LDK F +YNQ+ + G+ ++D+
Sbjct: 209 INSHLPEQIRIWGFVRTNRSFHAKNACDARIYEYFLPTYVLQAVDPRLYPLSAV-------------GKKAGIKDAQLSFDYVELPKTEQKDLENKRSFRIEPEQLDLLRSILKEYEGTHNFHNFTVNKRFEDRSANRYIISFEASDPIIRG-------GIEWVKCKVLGQSFMLHQIRKMIGLAIMMVRTGTPASLVERTFENEKLNIPKAPALGLLLDKTLFRMYNQKRSS-GEDDAVDF 429 HSP 2 Score: 89.3521 bits (220), Expect = 6.882e-15 Identity = 48/110 (43.64%), Postives = 64/110 (58.18%), Query Frame = 0
Query: 97 KKKVAMIIGYCGTDFQGMQMNPGAITIEAELEKAMYEAGCIKEANFGSLQKIGWSRSGRTDKGVHAAAQVVGCKLHVKMKSEENVDENRKEEEENAEGTGKGGANESLHA 206
K+KVA+++GYCGT + GMQ+NPG TIE EL KA+ AG + + N KI + R+ RTDKGVHAA QV C L + ++ + V + E G N S HA
Sbjct: 124 KRKVALLMGYCGTGYNGMQINPGVETIELELHKALAAAGAVSKDNAMDPHKIAFMRAARTDKGVHAAGQV--CSLKMIIEDPDIVTKINSHLPEQIRIWGFVRTNRSFHA 231
BLAST of EWM23644.1 vs. NCBI_GenBank
Match: gi|1023193204|gb|KZS90778.1| (tRNA pseudouridine synthase [Sistotremastrum niveocremeum HHB9708]) HSP 1 Score: 167.162 bits (422), Expect = 1.340e-40 Identity = 97/311 (31.19%), Postives = 153/311 (49.20%), Query Frame = 0
Query: 332 PPAPDALAAALEATRMAINRQLPPSIRIHGILRATRGFNAKNDCTRRRYCYWLPTFLLAEVEEVGAWLDGCAQQKKK-KGGGGKRGEAGGAQGISLNYPQPDLSALRQCFRSRLRVYRASSRQLERLGRTLRKYVGTHKFHNFSIRMSFRSGSVKRYIMAVEMGDPVVVGEDGGEDKGLEWVCVTLTGQAFLLHQIRKMVAVAIMVSRGSAPATLIEDAYQDVMLTLPMAPSEGLYLDKASFALYNQRATQIGQAASLDWEGEEEEEDKGGRAPSLSVGVLRERIRRFLEEEIVGHILRREDKTLVFTKWM 641
P PD +A IN +LPP IR+ G +R FNA+ C R+Y Y+ P++L + + + K + G G G A + + L + + +R R +R SS+ +ER + KY+G+H FHNF++ ++ S +R + A+E+ DPVV G EW+ V L GQ+F+LHQ RKMV VA+M+ R S P +LI + Y +T+P AP+ GL L+ F YN++ + D E+ + + P + R +I F + I ++ ED+ VF W+
Sbjct: 161 PEVPDLVAR--------INEELPPEIRLWGFVRTQNPFNARVSCDSRKYTYFFPSYLFIPPKPDSGFARALQETNVKLRAGAETSGVDGAADDVHPFWKDSSLDSSPEEDLARKRTWRCSSQDVERFRTAVNKYLGSHNFHNFTVGREYKDPSNRRVMKAIEVSDPVVYG-------NTEWISVMLHGQSFMLHQ-RKMVCVAVMMCRTSTPPSLIPELYGQRKVTVPKAPALGLLLEYPVFENYNRKVEDLNGKIPKDANPEQLDAIR----PIIDFEQFRPQIDAFKQHYIYDNMRTHEDREGVFDGWI 451 HSP 2 Score: 65.4698 bits (158), Expect = 1.964e-7 Identity = 52/159 (32.70%), Postives = 68/159 (42.77%), Query Frame = 0
Query: 22 RAWGRGGRGWGRHGKRGRG-------GWKGDSTNKRKSDESAAEKGGPKRQCFYEDRAPHSGSYAAKQRHENSEDGQDLLGNKKKVAMIIGYCGTDFQGMQM--NPGAITIEAELEKAMYEAGCIKEANFGSLQKIGWSRSGRTDKGVHAAAQVVGCKL 171
RA G RH K+ R STN + A G +R +D P G E+ E Q L K+ A++IG+ GT + GMQ N G TIE L A+ AG + E N K+ R+ RTD GVHAA VV ++
Sbjct: 8 RALDADGAASARHAKKSRTQDPTENPSDPTSSTNGKSGKRKLARNAGRRRGTRADDLPPQDG--------EDGEKKQRL--PKRACALLIGFSGTGYFGMQSQRNAGLKTIEGTLFDALVRAGAVSEDNADDPVKVNLQRAARTDAGVHAAGNVVSIRM 156
BLAST of EWM23644.1 vs. NCBI_GenBank
Match: gi|1023238413|gb|KZT34347.1| (pseudouridine synthase [Sistotremastrum suecicum HHB10207 ss-3]) HSP 1 Score: 166.007 bits (419), Expect = 2.907e-40 Identity = 96/311 (30.87%), Postives = 153/311 (49.20%), Query Frame = 0
Query: 332 PPAPDALAAALEATRMAINRQLPPSIRIHGILRATRGFNAKNDCTRRRYCYWLPTFLLAEVEEVGAWLDGCAQQKKK-KGGGGKRGEAGGAQGISLNYPQPDLSALRQCFRSRLRVYRASSRQLERLGRTLRKYVGTHKFHNFSIRMSFRSGSVKRYIMAVEMGDPVVVGEDGGEDKGLEWVCVTLTGQAFLLHQIRKMVAVAIMVSRGSAPATLIEDAYQDVMLTLPMAPSEGLYLDKASFALYNQRATQIGQAASLDWEGEEEEEDKGGRAPSLSVGVLRERIRRFLEEEIVGHILRREDKTLVFTKWM 641
P PD +A IN +LPP IR+ G +R FNA+ C R+Y Y+ P++L + + + K + G G G A + + L + + +R R +R S + +ER + KY+G+H FHNF++ ++ S +R + A+E+ DPVV G+ EW+ V L GQ+F+LHQ RKMV VA+M+ R S P +LI + Y +T+P AP+ GL L+ F YN++ + D E+ + + P + R +I F + I ++ ED+ VF W+
Sbjct: 162 PDVPDLVAK--------INEELPPEIRLWGFVRTQNSFNARVSCDSRKYTYFFPSYLFIPPKPDSGFAKALQETNVKLRAGAETSGVDGAADEVHPFWKDSSLDSSPEEDLARKRTWRCSLQDVERFRTAVNKYLGSHNFHNFTVGREYKDPSNRRVMKAIEVSDPVVYGD-------TEWISVMLHGQSFMLHQ-RKMVCVAVMMCRTSTPPSLIPELYGQRKVTVPKAPALGLLLEYPVFENYNRKVEDLNGKIPKDANPEQLDAIR----PIIDFEQFRPQIDAFKQHYIYDNMRTHEDREGVFDGWI 452
BLAST of EWM23644.1 vs. NCBI_GenBank
Match: gi|673014094|ref|XP_008861008.1| (tRNA pseudouridine(38-40) synthase [Aphanomyces invadans] >gi|574482606|gb|ETW09597.1| tRNA pseudouridine(38-40) synthase [Aphanomyces invadans]) HSP 1 Score: 160.229 bits (404), Expect = 7.068e-39 Identity = 101/300 (33.67%), Postives = 144/300 (48.00%), Query Frame = 0
Query: 342 LEATRMAINRQLPPSIRIHGILRATRGFNAKNDCTRRRYCYWLPTFLLAEVEEVGAWLDGCAQQKKKKGGGGKRGEAGGAQGISLNYPQPDLSALRQCFRSRLRVYRASSRQLERLGRTLRKYVGTHKFHNFSIRMSFRSGSVKRYIMAVEMGDPVVVGEDGGEDKGLEWVCVTLTGQAFLLHQIRKMVAVAIMVSRGSAPATLIEDAYQDVMLTLPMAPSEGLYLDKASFALYNQRATQIGQAASLDWEGEEEEEDKGGRAPSLSVGVLRERIRRFLEEEIVGHILRREDKTLVFTKWM 641
L R +N LPP I++ I+ T+ FN+KN C RR Y Y PTF+ A G D K G+ A + S+ P+ A+++ F R + L +L TL +VGTH FHN++ ++ S RYI++ E DP V G EW+ + + GQ+FLLH IRKM+ + V RGS PAT I+ A++ + LP APS GLYL KA F +YN + + + D E D+ +RI F E I I+ RE++ VF W+
Sbjct: 152 LNEFRNNVNSFLPPDIQVLDIVAVTKNFNSKNSCDRRTYEYLTPTFVFA---PKGVMTD------KPATASGQWTAATYDEFNSIKV-DPEAWAMQKEF-------RLDATALAKLRETLAIFVGTHNFHNYTSKLPPYSPQCNRYILSFEADDPFV-------KNGTEWIRLRVVGQSFLLHHIRKMIGTTMDVLRGSTPATTIKTAFEQTKMDLPKAPSAGLYLAKAHFEVYNDKNENHRPSLAFD------EPDQ------------LDRIEAFKEAFIFPEIMEREEQDAVFPLWL 409 HSP 2 Score: 108.997 bits (271), Expect = 1.516e-21 Identity = 52/100 (52.00%), Postives = 71/100 (71.00%), Query Frame = 0
Query: 74 HSGSYAAKQRHENSEDGQDLLGNKKKVAMIIGYCGTDFQGMQMNPGAITIEAELEKAMYEAGCIKEANFGSLQKIGWSRSGRTDKGVHAAAQVVGCKLHV 173
HSGSYAA+ ++ D + KK+ +++ YCG ++ GMQ+N G TIEAELE+A+YEAG I N+G +QKIGW+R+ RTDKGVHAA Q+V KL +
Sbjct: 49 HSGSYAAQLDPADTTD-KCCAAPKKRYGLLLAYCGKNYSGMQVNIGVKTIEAELERALYEAGGIARCNYGMIQKIGWNRAARTDKGVHAAGQLVSMKLCI 147
BLAST of EWM23644.1 vs. NCBI_GenBank
Match: gi|751183405|gb|KIL69344.1| (hypothetical protein M378DRAFT_70083 [Amanita muscaria Koide BX008]) HSP 1 Score: 160.614 bits (405), Expect = 2.075e-38 Identity = 107/362 (29.56%), Postives = 173/362 (47.79%), Query Frame = 0
Query: 349 INRQLPPSIRIHGILRATRGFNAKNDCTRRRYCYWLPTFLLAEVEEVGAWLDGCAQQKKKKGGGGKRGEAGGAQGISLNYPQPDLSALRQCFRSRLRVYRASSRQLERLGRTLRKYVGTHKFHNFSIRMSFRSGSVKRYIMAVEMGDPVVVGEDGGEDKGLEWVCVTLTGQAFLLHQIRKMVAVAIMVSRGSAPATLIEDAYQDVMLTLPMAPSEGLYLDKASFALYNQRATQIGQAASLDWEGEEEEEDKGGRAPSLSVGVLRERIRRFLEEEIVGHILRREDKTLVFTKWMYHCRQKYEMGELDAFAARGLTVAEQRSEAPKKQVMAEMMQEREEAARGKRLEQQEG-ACDEQGKEEEKL 709
IN LPP IR+ G +RA FNA+ C R+Y Y+ P+++L + G+ G Q K G G + + + S+ ++ +R R +R + Q+ RL + K+ GTH FHNF++ F+ S +R++ +E+ DPVV G+ EW+ V GQ+F+LHQ RKM+ +M R AP+ +I++ Y ++ +P PS GL L++ F YN R I + D R P + + R++I +F ++ I ++ ED+T +F W+ +D +A L + P+ V+ E +R+ R KR G A + K EEKL
Sbjct: 169 INGLLPPEIRLWGFVRAQNSFNARIACDSRKYTYYFPSYILLPPKP-GS---GFDQASKHHGYGSDDSPLHTDVLLDNEFWKGHESSSKEEDLARKRAWRVNPSQVARLREIVSKFEGTHNFHNFTVGREFKDRSNQRHMKKIEVVDPVVYGD-------TEWISVLFHGQSFMLHQQRKMMTALVMTYRTGAPSDIIDELYSPRIVLVPKMPSLGLLLEEPVFESYNGRMAIINDKL--------DPSDPAYR-PPIDFDLYRDQIIKFKDDFIYKNMREVEDQTGLFDAWIRM---------VDTYAGNDLLYFNSKGTVPEAAVI-EKGVKRDNPFREKRKFNMTGFAATTEDKSEEKL 500 HSP 2 Score: 65.855 bits (159), Expect = 1.571e-7 Identity = 31/75 (41.33%), Postives = 45/75 (60.00%), Query Frame = 0
Query: 97 KKKVAMIIGYCGTDFQGMQMNPGAI-TIEAELEKAMYEAGCIKEANFGSLQKIGWSRSGRTDKGVHAAAQVVGCK 170
K++ A++IG+CGT + GMQ P TIE L A+ +AG + + N K+ +R+ RTD GVHAA +V K
Sbjct: 83 KRQCALLIGFCGTGYSGMQFQPNVPRTIEGVLFDALVKAGAVSQDNADDPVKVNLARAARTDAGVHAAGNIVSIK 157
BLAST of EWM23644.1 vs. NCBI_GenBank
Match: gi|673014096|ref|XP_008861009.1| (tRNA pseudouridine(38-40) synthase, variant [Aphanomyces invadans] >gi|574482607|gb|ETW09598.1| tRNA pseudouridine(38-40) synthase, variant [Aphanomyces invadans]) HSP 1 Score: 157.532 bits (397), Expect = 6.151e-38 Identity = 101/300 (33.67%), Postives = 144/300 (48.00%), Query Frame = 0
Query: 342 LEATRMAINRQLPPSIRIHGILRATRGFNAKNDCTRRRYCYWLPTFLLAEVEEVGAWLDGCAQQKKKKGGGGKRGEAGGAQGISLNYPQPDLSALRQCFRSRLRVYRASSRQLERLGRTLRKYVGTHKFHNFSIRMSFRSGSVKRYIMAVEMGDPVVVGEDGGEDKGLEWVCVTLTGQAFLLHQIRKMVAVAIMVSRGSAPATLIEDAYQDVMLTLPMAPSEGLYLDKASFALYNQRATQIGQAASLDWEGEEEEEDKGGRAPSLSVGVLRERIRRFLEEEIVGHILRREDKTLVFTKWM 641
L R +N LPP I++ I+ T+ FN+KN C RR Y Y PTF+ A G D K G+ A + S+ P+ A+++ F R + L +L TL +VGTH FHN++ ++ S RYI++ E DP V G EW+ + + GQ+FLLH IRKM+ + V RGS PAT I+ A++ + LP APS GLYL KA F +YN + + + D E D+ +RI F E I I+ RE++ VF W+
Sbjct: 139 LNEFRNNVNSFLPPDIQVLDIVAVTKNFNSKNSCDRRTYEYLTPTFVFA---PKGVMTD------KPATASGQWTAATYDEFNSIKV-DPEAWAMQKEF-------RLDATALAKLRETLAIFVGTHNFHNYTSKLPPYSPQCNRYILSFEADDPFV-------KNGTEWIRLRVVGQSFLLHHIRKMIGTTMDVLRGSTPATTIKTAFEQTKMDLPKAPSAGLYLAKAHFEVYNDKNENHRPSLAFD------EPDQ------------LDRIEAFKEAFIFPEIMEREEQDAVFPLWL 396 HSP 2 Score: 80.4925 bits (197), Expect = 2.926e-12 Identity = 42/80 (52.50%), Postives = 51/80 (63.75%), Query Frame = 0
Query: 98 KKVAMIIGYCGTDFQG---MQMNPGAITIEAELEKAMYEAGCIKEANFGSLQKIGWSRSGRTDKGVHAAAQVVGCKLHVK 174
K M YC D G N G TIEAELE+A+YEAG I N+G +QKIGW+R+ RTDKGVHAA Q+V KL ++
Sbjct: 56 KCTYMHASYCLCDCCGHTPCHSNIGVKTIEAELERALYEAGGIARCNYGMIQKIGWNRAARTDKGVHAAGQLVSMKLCIE 135
BLAST of EWM23644.1 vs. NCBI_GenBank
Match: gi|1021809351|gb|KZP01602.1| (pseudouridine synthase [Calocera viscosa TUFC12733]) HSP 1 Score: 157.918 bits (398), Expect = 2.691e-37 Identity = 92/294 (31.29%), Postives = 149/294 (50.68%), Query Frame = 0
Query: 349 INRQLPPSIRIHGILRATRGFNAKNDCTRRRYCYWLPTFLLAEVEEVGAWLDGCAQQKKKKGGGGKRGEA-GGAQGISLNYPQPDLSALRQCFRSRLRVYRASSRQLERLGRTLRKYVGTHKFHNFSIRMSFRSGSVKRYIMAVEMGDPVVVGEDGGEDKGLEWVCVTLTGQAFLLHQIRKMVAVAIMVSRGSAPATLIEDAYQDVMLTLPMAPSEGLYLDKASFALYNQRATQIGQAASLDWEGEEEEEDKGGRAPSLSVGVLRERIRRFLEEEIVGHILRREDKTLVFTKWM 641
+N LPP +R+ G +R FNA+ C R Y Y P+++L + G+ + AQ K + A GA +P + L + R R +R ++RL ++ + GTH F+N+++ F+ +VKRY+M++E+ DP VVG+ +EW+ V GQ+F+LHQIRKM+++AI+ R + P +LI ++Y + +P AP+ GL L++ F YN + +G D + +G + RE I RF E I + +RE +T F WM
Sbjct: 212 VNTHLPPEVRLWGTVRTANNFNARMSCDSRVYEYLFPSYILIPPKP-GSKM--AAQMASDKPVSDEALAALAGATKTGYMHPFWAVEDLGEPDLERKRRWRVGEESIKRLRELVKAFEGTHNFYNYTVGKDFKDKAVKRYMMSIEVRDPQVVGD-------MEWISVKFHGQSFMLHQIRKMISMAILACRAACPPSLILESYGPTRIRIPKAPALGLLLEEPQFGAYNAQMV-VGNRKLDDLRAKGRAVPEGDYREPIDFEPYREEIARFKLEMIYEKLRQREKETGTFDLWM 494 HSP 2 Score: 81.2629 bits (199), Expect = 2.255e-12 Identity = 37/75 (49.33%), Postives = 50/75 (66.67%), Query Frame = 0
Query: 97 KKKVAMIIGYCGTDFQGMQMNPGAITIEAELEKAMYEAGCIKEANFGSLQKIGWSRSGRTDKGVHAAAQVVGCKL 171
KKKVA+++G+CGT GMQ NP A TIE L +A+ +AGC+ N K+G +R+ RTD GVHAA +V K+
Sbjct: 124 KKKVALLVGFCGTGSHGMQYNPPARTIEGILFEALIKAGCVSADNSDDPNKVGLTRAARTDAGVHAAGNIVSMKI 198
BLAST of EWM23644.1 vs. NCBI_GenBank
Match: gi|749898018|gb|KIJ65635.1| (hypothetical protein HYDPIDRAFT_88408 [Hydnomerulius pinastri MD-312]) HSP 1 Score: 155.606 bits (392), Expect = 1.360e-36 Identity = 95/316 (30.06%), Postives = 152/316 (48.10%), Query Frame = 0
Query: 349 INRQLPPSIRIHGILRATRGFNAKNDCTRRRYCYWLPTFLLAEVEEVGAWLDG--CAQQKKKKGGGGKRGEAGGAQGISLNYPQPDLSALRQCFRSRLRVYRASSRQLERLGRTLRKYVGTHKFHNFSIRMSFRSGSVKRYIMAVEMGDPVVVGEDGGEDKGLEWVCVTLTGQAFLLHQIRKMVAVAIMVSRGSAPATLIEDAYQDVMLTLPMAPSEGLYLDKASFALYNQRATQIGQAASLDWEGEEEEEDKGGRAPSLSVGVLRERIRRFLEEEIVGHILRREDKTLVFTKWMYHCRQKYEMGELDAFAARGLT 662
+N +LPP IR+ G +R GFNA+ C R+Y Y+ P++LL + A++ A + A+ S PQ DL+ RQ +RAS +ERL T++K+ GTH FHNF++ F S +R ++ ++ DPVV G+ EW+ V GQ+F+LHQ RKM++ ++ R P+ +I++ Y M+ +P P+ GL L+ F YN R + + + D E+ + RE I F ++ I + ED+ +F W+ + YE +L F RG+
Sbjct: 211 VNAELPPEIRVWGKVRTQNGFNARLSCDSRKYTYFFPSYLLIPPKPRSAFVRAQQAAASSPSNTPPHPFWDVADAESSS---PQEDLARKRQ--------WRASPEDVERLRATIKKFEGTHNFHNFTVGRDFSDRSNQRTMIKFQIADPVVYGD-------TEWISVLFHGQSFMLHQ-RKMMSALVLSCRTGTPSEIIDELYGPRMVLVPKMPALGLLLEYPIFQSYNNRISSVNEREKWDSSNPFFREN-------IDFEQYREAIDDFKQKFIYDGMRATEDQHGIFDAWIRYV-DNYEGNDLLYFNPRGII 499 HSP 2 Score: 65.0846 bits (157), Expect = 3.378e-7 Identity = 34/78 (43.59%), Postives = 44/78 (56.41%), Query Frame = 0
Query: 97 KKKVAMIIGYCGTDFQGMQMNP---GAITIEAELEKAMYEAGCIKEANFGSLQKIGWSRSGRTDKGVHAAAQVVGCKL 171
K+ A++IG+CGT GMQ+ P G TIE L A+ AG + + N K+ R+ RTD GVHAA VV KL
Sbjct: 120 KRMTALLIGFCGTGCSGMQIQPREAGLRTIEGVLFDALVRAGAVSQDNSDDPVKVNLGRAARTDAGVHAAGNVVSMKL 197 The following BLAST results are available for this feature:
BLAST of EWM23644.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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