EWM29968.1, cds704 (CDS) Nannochloropsis gaditana

Overview
NameEWM29968.1
Unique Namecds704
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:213510..214697 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29968.1
Producttranscription factor protein
Orig transcript idgnl|cribi|Naga_100200g8.10017.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:213510..214697 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0005783endoplasmic reticulum
GO:0016021integral component of membrane
Vocabulary: INTERPRO
TermDefinition
IPR016439Lag1/Lac1
IPR006634TLC-dom
Homology
BLAST of EWM29968.1 vs. NCBI_GenBank
Match: gi|585112569|gb|EWM29968.1| (transcription factor protein [Nannochloropsis gaditana])

HSP 1 Score: 811.987 bits (2096), Expect = 0.000e+0
Identity = 395/395 (100.00%), Postives = 395/395 (100.00%), Query Frame = 0
Query:    1 MPLAAATAAPALVHKVLACWANFKRRTSPAFASYAQYLPIRYSRKLTVKKLEDFGFPRAEDLWDGVLIAVLLTALRLVLEYAVLRPFGRWCMQQKYYKLAAKSPIPLIDATLRVNKVPMLHEKQKLAKALNLPVADVDEYMRVWRNAEREAKALHKFAEVAWKLIVHVFVTYWGIRHIFLTQAWARDLTLCWSSYPFADLPSEVFVYYVMEFGIYIHELIFLFFEARRSDFFALLLHHIATLSLISGSYLFNYIRIGALVMVLHDLADSFLELAKLFNYVTNVHTWAQGVTDFFFVAFALVFCVTRCLLFPLYILRNTLTVPQLYLYQQELSVGSLNVFLCVLYCLHLFWMSLIVKMAVKMVRTGAVTKDERSDDEGSYLEPSMMVSKSISQKED 395
            MPLAAATAAPALVHKVLACWANFKRRTSPAFASYAQYLPIRYSRKLTVKKLEDFGFPRAEDLWDGVLIAVLLTALRLVLEYAVLRPFGRWCMQQKYYKLAAKSPIPLIDATLRVNKVPMLHEKQKLAKALNLPVADVDEYMRVWRNAEREAKALHKFAEVAWKLIVHVFVTYWGIRHIFLTQAWARDLTLCWSSYPFADLPSEVFVYYVMEFGIYIHELIFLFFEARRSDFFALLLHHIATLSLISGSYLFNYIRIGALVMVLHDLADSFLELAKLFNYVTNVHTWAQGVTDFFFVAFALVFCVTRCLLFPLYILRNTLTVPQLYLYQQELSVGSLNVFLCVLYCLHLFWMSLIVKMAVKMVRTGAVTKDERSDDEGSYLEPSMMVSKSISQKED
Sbjct:    1 MPLAAATAAPALVHKVLACWANFKRRTSPAFASYAQYLPIRYSRKLTVKKLEDFGFPRAEDLWDGVLIAVLLTALRLVLEYAVLRPFGRWCMQQKYYKLAAKSPIPLIDATLRVNKVPMLHEKQKLAKALNLPVADVDEYMRVWRNAEREAKALHKFAEVAWKLIVHVFVTYWGIRHIFLTQAWARDLTLCWSSYPFADLPSEVFVYYVMEFGIYIHELIFLFFEARRSDFFALLLHHIATLSLISGSYLFNYIRIGALVMVLHDLADSFLELAKLFNYVTNVHTWAQGVTDFFFVAFALVFCVTRCLLFPLYILRNTLTVPQLYLYQQELSVGSLNVFLCVLYCLHLFWMSLIVKMAVKMVRTGAVTKDERSDDEGSYLEPSMMVSKSISQKED 395          
BLAST of EWM29968.1 vs. NCBI_GenBank
Match: gi|585101854|gb|EWM21599.1| (ceramide synthase 2 [Nannochloropsis gaditana])

HSP 1 Score: 289.656 bits (740), Expect = 1.076e-91
Identity = 157/365 (43.01%), Postives = 219/365 (60.00%), Query Frame = 0
Query:   32 ASYAQYLPIRYSRKLTVKKLEDFGFPRAEDLWDGVLIAVLLTALRLVLEYAVLRPFGRWCMQQKYYKLAAKSPIPLIDATLRVNKVPMLHEKQKLAKALNLPVADVDEYMRVWRNAEREAKALHKFAEVAWKLIVHVFVTYWGIRHIFLTQAWARDLTLCWSSYPFADLPSEVFVYYVMEFGIYIHELIFLFFEARRSDFFALLLHHIATLSLISGSYLFNYIRIGALVMVLHDLADSFLELAKLFNYVTNVHTWAQGVTDFFFVAFALVFCVTRCLLFPLYI-LRNTLTVPQLYLYQQELSVGSLNVFLCVLYCLHLFWMSLIVKMAVKMVRTGAVTKDERSDDEGSYLEPSMMVSKSISQKED 395
             SY Q+LP R     T  +LE   FP   DL DGVL+A   T LR++L   V +P GR  M+  Y+++      P ++  L  + +P   +   +A+ +    A V  Y R  RN  RE  ALHKF EV+WKL+ HV +T++G   +   + W  D+  CW  YP        + YY++EFG + HE++ +F+EARRSDF+A+L HH+ATL LI+GSY  N++ IG LVM++HD+AD FLELAKLFNY++    WA+ +TD  FV FALVF VTR L+FP  +   N++ +P+ Y       +G LNVF  VL  LH +WM LI++MAVKM+ +G V+ D RSDDE         +  S  +KED
Sbjct:   24 GSYIQFLP-RMRNGETAAELEGENFPLVGDLVDGVLVAACFTILRVLLTRLVFQPAGRGIMKHSYFRMVRD---PRLERVLDRDPLPSAKKIAGMAREVKSTPAAVSAYCRRARNRGREEAALHKFNEVSWKLLCHVVLTWYGAVAVLARERWWYDVDSCWERYPHMVNSKAAYWYYMLEFGAFGHEMMAIFWEARRSDFWAMLTHHVATLLLIAGSYTCNFLPIGCLVMIVHDIADVFLELAKLFNYMSKARPWAKRLTDALFVLFALVFLVTRLLVFPFRVWWANSMKMPRKYFGYHYTGIGVLNVFCVVLIVLHAYWMFLILRMAVKMLASGEVSNDTRSDDEEE-------LEASDGEKED 377          
BLAST of EWM29968.1 vs. NCBI_GenBank
Match: gi|542239385|ref|XP_003452526.2| (PREDICTED: ceramide synthase 2 [Oreochromis niloticus])

HSP 1 Score: 185.652 bits (470), Expect = 2.278e-51
Identity = 110/322 (34.16%), Postives = 170/322 (52.80%), Query Frame = 0
Query:   56 FPRAEDLWDGVLIAVLLTALRLVLEYAVLRPFGRWCMQQKYYKLAAKSPIPLIDATL-RVNKVPMLHEKQKLAKALNLPVADVDEYMRVWRNAEREAKALHKFAEVAWKLIVHVFVTYWGIRHIFLTQAWARDLTLCWSSYPFADLPSEVFVYYVMEFGIYIHELIFLFFEARRSDFFALLLHHIATLSLISGSYLFNYIRIGALVMVLHDLADSFLELAKLFNYVTNVHTWAQGVTDFFFVAFALVFCVTRCLLFPLYILRNTLTVPQLYLYQQELSVGSLNVFLCVLYCLHLFWMSLIVKMAVKMVRTGAVTKDERSDDE 376
            FP  +DLW  + IA+    +R + E  V  P           ++ A SP P++++     +K P     + L+K     V  V  + R  RN +R +K L KF E +W+   ++   + G+  + + + W  D+ L W ++P   L    + YY++E G YI  L+ +  + +R DF   ++HH+AT++LIS S+L NYIR G L+M++HD AD  +E AK+FNY      W +   +F F  FA VF VTR ++ P +I+  T   P L LY         N  +CVL  LH+FW  LI++M VK +    + +DERSD E
Sbjct:   33 FPNPKDLWATIPIALCFLVIRQIFERTVAIPLASLLGVSDKQRVGA-SPNPVLESYFCSTSKHPKQSSIESLSKQTGCSVRQVQRWFRRRRNQDRPSK-LKKFREASWRFTFYLLAFFAGLA-VLIDKPWFYDVKLIWENFPKMPLLPSQYWYYMIELGFYISLLVSVASDVKRKDFKEQIIHHVATIALISFSWLVNYIRAGTLIMLVHDAADYLMESAKMFNYA----GWRR-TCNFIFTMFAAVFIVTRLIILPFWIIHTTFVYP-LTLYSPFFGFYFFNGLMCVLQVLHIFWAVLILRMVVKFLPGNDIVEDERSDKE 345          
BLAST of EWM29968.1 vs. NCBI_GenBank
Match: gi|701369921|ref|XP_009962904.1| (PREDICTED: ceramide synthase 4 [Tyto alba] >gi|678171362|gb|KFV39366.1| Ceramide synthase 4 [Tyto alba])

HSP 1 Score: 183.726 bits (465), Expect = 1.707e-50
Identity = 114/332 (34.34%), Postives = 173/332 (52.11%), Query Frame = 0
Query:   48 VKKLEDFGFPRAEDLWDGVLIAVLLTALRLVLEYAVLRPFGRWCMQQKYYKLAAKSPIPLIDATLRVN-KVPMLHEKQKLAKALNLPVADVDEYMRVWRNAEREAKALHKFAEVAWKLIVHVFVTYWGIRHIFLTQAWARDLTLCWSSYPFADLPSEVFVYYVMEFGIYIHELIFLFFEARRSDFFALLLHHIATLSLISGSYLFNYIRIGALVMVLHDLADSFLELAKLFNYVTNVHTWAQGVTDFFFVAFALVFCVTRCLLFPLYILRNTLTVPQLYLYQQELSVGSLNVFLCVLYCLHLFWMSLIVKMAVKMVRTGAVTKDERSDDEGS 378
            +++ ED  +P+  DL   V  A++L  LR   E A+  P       +   +  A+ PIP+++       K P   E   LAK  +LPV  V+ + R  RN +R + +  KF E  W+   ++   + G+  +   + W  D   CW+ YP   L   +F YY++E   Y+  +  L F+ +R DF   ++HH AT+ LIS SY  NYIRIG LVMV+HD +D FLE  K+FNY+     W +   D  F+ F+ VF ++R ++FP  +L NT     + ++Q       +N  L +L  LH+FW  LI+ M  K +  G + KD RSD E S
Sbjct:   25 MQESEDVHYPQPRDLLLSVPFALILVVLRCAFERAIALPLSSKLGVRDKQRPKAQ-PIPVLEMFYNTRCKNPEEGELISLAKQCDLPVKKVERWFRCRRNTDRPSLS-KKFCEACWRFTFYIISFFTGLA-VLYDKPWLWDHRECWTGYPQQPLQPSLFWYYLLELSFYVSLVFTLPFDVKRKDFKEQIVHHAATIFLISFSYCANYIRIGTLVMVIHDASDCFLEPTKIFNYM----KWKK-TCDSLFMIFSTVFLISRLVIFPYTVLYNTYYY-SMEIFQPFFGYYFVNALLIILQLLHVFWSCLIIHMVYKFILQGTMEKDMRSDTEES 347          
BLAST of EWM29968.1 vs. NCBI_GenBank
Match: gi|410911842|ref|XP_003969399.1| (PREDICTED: ceramide synthase 2-like [Takifugu rubripes])

HSP 1 Score: 182.57 bits (462), Expect = 4.097e-50
Identity = 108/339 (31.86%), Postives = 178/339 (52.51%), Query Frame = 0
Query:   56 FPRAEDLWDGVLIAVLLTALRLVLEYAVLRPFGRWCMQQKYYKLAAKSPIPLIDATL-RVNKVPMLHEKQKLAKALNLPVADVDEYMRVWRNAEREAKALHKFAEVAWKLIVHVFVTYWGIRHIFLTQAWARDLTLCWSSYPFADLPSEVFVYYVMEFGIYIHELIFLFFEARRSDFFALLLHHIATLSLISGSYLFNYIRIGALVMVLHDLADSFLELAKLFNYVTNVHTWAQGVTDFFFVAFALVFCVTRCLLFPLYILRNTLTVPQLYLYQQELSVGSLNVFLCVLYCLHLFWMSLIVKMAVKMVRTGAVTKDERSDDEGSYLEPSMMVSKSISQK 393
            +P+  DLW  + I +    +R + E  V  P           ++ A  P P+++A   R +K P     + L+K     V  V  + R  RN  R +K L KF E +W+   ++   + G+  + + + W  DL L W  +P   L    + YY++E G Y+  ++ +  + +R DF   ++HH+AT++LIS S+L NYIR G L+M++HD +D  +E AK+FNY      W +   +F F  FA+VF +TR ++ P +I+  TL  P L LY+  +     N  +CVL  L +FW +LI++M VK +    + +DERSD+E +  +     ++  SQ 
Sbjct:   33 YPKLPDLWVSIPITICFLFVRQIFERTVASPLASLLGVHDKKRVCA-PPNPVLEAFFCRTSKHPTQTSIESLSKKTGCSVRQVQRWFRQRRNQGRPSK-LKKFQEASWRFTFYLLAFFAGLAAL-VDKPWFYDLKLMWEDFPKMPLLPSQYWYYMIELGFYLSLVVSVASDVKRKDFKEQVIHHVATIALISFSWLVNYIRAGTLIMLVHDASDYLMESAKMFNYA----GWRK-TCNFIFTMFAVVFIITRLVILPFWIIHTTLVYP-LSLYKPFIGFYFFNGLMCVLQVLQIFWAALILRMVVKFLPGNDIVQDERSDNEETESDDEGEDAREKSQN 362          
BLAST of EWM29968.1 vs. NCBI_GenBank
Match: gi|583985663|ref|XP_006788079.1| (PREDICTED: ceramide synthase 2-like [Neolamprologus brichardi])

HSP 1 Score: 182.185 bits (461), Expect = 5.542e-50
Identity = 108/324 (33.33%), Postives = 169/324 (52.16%), Query Frame = 0
Query:   56 FPRAEDLWDGVLIAVLLTALRLVLEYAVLRPFGRWCMQQKYYKLAAKSPIPLIDATL-RVNKVPMLHEKQKLAKALNLPVADVDEYMRVWRNAEREAKALHKFAEVAWKLIVHVFVTYWGIRHIFLTQAWARDLTLCWSSYPFADLPSEVFVYYVMEFGIYIHELIFLFFEARRSDFFALLLHHIATLSLISGSYLFNYIRIGALVMVLHDLADSFLELAKLFNYVTNVHTWAQGVTDFFFVAFALVFCVTRCLLFPLYILRNTLTVPQLYLYQQELSVGSLNVFLCVLYCLHLFWMSLIVKMAVKMVRTGAVTKDERSDDEGS 378
            FP+ +DLW  + IA     +R + E  V  P           ++ A  P P++++     +K P     + L+K     V  V  + R  RN +R +K L KF E +W+   ++   + G+  + + + W  D+ L W ++P   L    + YY++E G YI  +  +  + +R DF   ++HH+AT++LIS S+L NYIR G L+M++HD AD  +E AK+FNY      W +   +F F  FA VF VTR ++ P +I+  T   P L LY         N  +CVL  LH+FW  LI++M VK +    + +DERSD E +
Sbjct:   33 FPKPQDLWATIPIAFCFLVIRQIFERTVAIPLASLLGVSDKQRVRA-PPNPVLESYFCSTSKHPKQSSIESLSKQTGCSVQQVQRWFRRRRNQDRPSK-LKKFREASWRFTFYLLAFFAGLA-VLIDKPWFYDVKLIWENFPKMPLLPSQYWYYMIELGFYISLIFSVASDVKRKDFKEQIIHHVATIALISFSWLVNYIRAGTLIMLVHDAADYLMESAKMFNYA----GWRR-TCNFIFTMFAAVFIVTRLIILPFWIIHTTFVYP-LSLYSPFFGFYFFNGLMCVLQVLHIFWAVLILRMVVKFLPGNDIVEDERSDKEET 347          
BLAST of EWM29968.1 vs. NCBI_GenBank
Match: gi|548411225|ref|XP_005740744.1| (PREDICTED: ceramide synthase 2-like [Pundamilia nyererei])

HSP 1 Score: 181.8 bits (460), Expect = 7.120e-50
Identity = 109/324 (33.64%), Postives = 169/324 (52.16%), Query Frame = 0
Query:   56 FPRAEDLWDGVLIAVLLTALRLVLEYAVLRPFGRWCMQQKYYKLAAKSPIPLIDATL-RVNKVPMLHEKQKLAKALNLPVADVDEYMRVWRNAEREAKALHKFAEVAWKLIVHVFVTYWGIRHIFLTQAWARDLTLCWSSYPFADLPSEVFVYYVMEFGIYIHELIFLFFEARRSDFFALLLHHIATLSLISGSYLFNYIRIGALVMVLHDLADSFLELAKLFNYVTNVHTWAQGVTDFFFVAFALVFCVTRCLLFPLYILRNTLTVPQLYLYQQELSVGSLNVFLCVLYCLHLFWMSLIVKMAVKMVRTGAVTKDERSDDEGS 378
            FP+ +DLW  + IA     +R + E  V  P           ++ A  P P++++     +K P     + L+K     V  V  + R  RN +R +K L KF E +W+   ++   + G+  + + + W  D+ L W ++P   L    + YY++E G YI  L  +  + +R DF   ++HH+AT++LIS S+L NYIR G L+M++HD AD  +E AK+FNY      W +   +F F  FA VF VTR ++ P +I+  T   P L LY         N  +CVL  LH+FW  LI++M VK +    + +DERSD E +
Sbjct:   33 FPKPQDLWATIPIAFCFLIIRQIFEQTVAIPLASLLGVSDKQRVRA-PPNPVLESYFCSTSKHPKQSSIESLSKQTGCSVRQVQRWFRRRRNQDRPSK-LKKFREASWRFTFYLLAFFAGLA-VLIDKPWFYDVKLIWENFPKMPLLPSQYWYYMIELGFYISLLFSVASDVKRKDFKEQIVHHVATIALISFSWLVNYIRAGTLIMLVHDAADYLMESAKMFNYA----GWRR-TCNFIFTMFAAVFIVTRLIILPFWIIHTTFVYP-LTLYTPFFGFYFFNGLMCVLQVLHIFWAVLILRMVVKFLPGNDIVEDERSDKEET 347          
BLAST of EWM29968.1 vs. NCBI_GenBank
Match: gi|973161120|ref|XP_015214549.1| (PREDICTED: ceramide synthase 6 isoform X2 [Lepisosteus oculatus])

HSP 1 Score: 181.8 bits (460), Expect = 7.462e-50
Identity = 119/359 (33.15%), Postives = 180/359 (50.14%), Query Frame = 0
Query:   48 VKKLEDFGFPRAEDLWDGVLIAVLLTALRLVLEYAVLRPFGRWCMQQKYYKLAAKSPIPLIDATLRVNKVPMLHEKQKLAKALNLPVADVDEYMRVWRNAEREAKALHKFAEVAWKLIVHVFVTYWGIRHIFLTQAWARDLTLCWSSYPFADLPSEVFVYYVMEFGIYIHELIFLFFEARRSDFFALLLHHIATLSLISGSYLFNYIRIGALVMVLHDLADSFLELAKLFNYVTNVHTWAQGVTDFFFVAFALVFCVTRCLLFPLYILRNTLTVPQLYLYQQELSVGS------LNVFLCVLYCLHLFWMSLIVKMAVKMVRTGAVTKDERSD-----DEGSYLEPSMMVSKSISQKED 395
            +K  ++  FP+AEDL+    +A  +  +RLV E  + RP       Q      A+    L      + K P     + L+K L+  V  +  + R  RN E+ +  L +F E  W+   ++++  +G+R +  T +W  +    W +YP+  L +++  YY++E   Y+  L   F + RR DF  + LHH+ATLSLI+ SY+ N +R+G LVM LHD AD  LE AK+ NY        Q + D  FV FALVF  TR  ++P++IL  T       L++    VG        N  L +L  LH FW  LI+K+A K +  G V+KD+RSD     DE     P+  V  S +   +
Sbjct:   24 LKNTDEATFPQAEDLYLAFPLAFCIFMIRLVFERFIARPCALGLKIQANGPQKAQPNAILEKVFTAITKHPDEKRLEGLSKQLDWDVRTIQRWFRQRRNQEKPS-TLTRFCESMWRFTFYLYIFTYGVRFLKKT-SWLWNTRESWYNYPYQPLTADLHYYYIVELSFYLSLLFSQFTDIRRKDFLIMFLHHLATLSLITFSYVNNMVRVGTLVMCLHDAADVLLEAAKMANYAK-----CQRLCDLIFVMFALVFISTRLGIYPVWILNTT-------LFESWEIVGPYPSWWVFNFLLILLQVLHSFWSYLIIKIACKAISKGKVSKDDRSDVESSSDEDEEQPPTQKVHNSATNGTN 368          
BLAST of EWM29968.1 vs. NCBI_GenBank
Match: gi|498977342|ref|XP_004549088.1| (PREDICTED: ceramide synthase 2-like [Maylandia zebra] >gi|554834347|ref|XP_005927693.1| PREDICTED: ceramide synthase 2-like [Haplochromis burtoni])

HSP 1 Score: 181.415 bits (459), Expect = 9.979e-50
Identity = 108/324 (33.33%), Postives = 169/324 (52.16%), Query Frame = 0
Query:   56 FPRAEDLWDGVLIAVLLTALRLVLEYAVLRPFGRWCMQQKYYKLAAKSPIPLIDATL-RVNKVPMLHEKQKLAKALNLPVADVDEYMRVWRNAEREAKALHKFAEVAWKLIVHVFVTYWGIRHIFLTQAWARDLTLCWSSYPFADLPSEVFVYYVMEFGIYIHELIFLFFEARRSDFFALLLHHIATLSLISGSYLFNYIRIGALVMVLHDLADSFLELAKLFNYVTNVHTWAQGVTDFFFVAFALVFCVTRCLLFPLYILRNTLTVPQLYLYQQELSVGSLNVFLCVLYCLHLFWMSLIVKMAVKMVRTGAVTKDERSDDEGS 378
            FP+ +DLW  + IA     +R + E  V  P           ++ A  P P++++     +K P     + L+K     V  V  + R  RN +R +K L KF E +W+   ++   + G+  + + + W  D+ L W ++P   L    + YY++E G YI  +  +  + +R DF   ++HH+AT++LIS S+L NYIR G L+M++HD AD  +E AK+FNY      W +   +F F  FA VF VTR ++ P +I+  T   P L LY         N  +CVL  LH+FW  LI++M VK +    + +DERSD E +
Sbjct:   33 FPKPQDLWATIPIAFCFLIIRQIFEQTVAIPLASLLGVSDKQRVRA-PPNPVLESYFCSTSKHPKQSSIESLSKQTGCSVRQVQRWFRRRRNQDRPSK-LKKFREASWRFTFYLLAFFAGLA-VLIDKPWFYDVKLIWENFPKMPLLPSQYWYYMIELGFYISLIFSVASDVKRKDFKEQIIHHVATIALISFSWLVNYIRAGTLIMLVHDAADYLMESAKMFNYA----GWRR-TCNFIFTMFAAVFIVTRLIILPFWIIHTTFVYP-LTLYTPFFGFYFFNGLMCVLQVLHIFWAVLILRMVVKFLPGNDIVEDERSDKEET 347          
BLAST of EWM29968.1 vs. NCBI_GenBank
Match: gi|1197682720|ref|XP_021137000.1| (ceramide synthase 4 isoform X2 [Columba livia] >gi|449266833|gb|EMC77830.1| LAG1 longevity assurance like protein 4 [Columba livia])

HSP 1 Score: 181.415 bits (459), Expect = 1.755e-49
Identity = 116/332 (34.94%), Postives = 175/332 (52.71%), Query Frame = 0
Query:   48 VKKLEDFGFPRAEDLWDGVLIAVLLTALRLVLEYAVLRPFG-RWCMQQKYYKLAAKSPIPLIDATLRVNKVPMLHEKQKLAKALNLPVADVDEYMRVWRNAEREAKALHKFAEVAWKLIVHVFVTYWGIRHIFLTQAWARDLTLCWSSYPFADLPSEVFVYYVMEFGIYIHELIFLFFEARRSDFFALLLHHIATLSLISGSYLFNYIRIGALVMVLHDLADSFLELAKLFNYVTNVHTWAQGVTDFFFVAFALVFCVTRCLLFPLYILRNTLTVPQLYLYQQELSVGSLNVFLCVLYCLHLFWMSLIVKMAVKMVRTGAVTKDERSDDEGS 378
            +++ ED  +P+  DL   +  A++L A+R   E AV  P   +  ++ K    A  +P+ L        K P   E   LAK  +LPV  V+ + R  RNA+R + +  KF E  W+ + ++   + G+  +   + W  D   CW+ YP   L   +F YY++E   Y   +  L F+ +R DF   ++HH AT+ LIS SY  NYIRIG LV+V+HD AD FLE  K+FNY+     W +   D  F+ F+ VF ++R ++FP  +L NT     + ++Q       +N  L +L  LH+FW  LI++M  K V  G + KD RSD E S
Sbjct:   25 MQETEDTRYPQPRDLLLSIPFAIVLVAIRYAFERAVALPLSSKLGVRDKQRPKAQPNPV-LETFYTTCCKNPKESELIGLAKQSDLPVRKVERWFRRRRNADRPSLS-KKFCEACWRFLFYITAFFTGL-AVLYDKPWFWDHRECWTGYPQQPLQPSLFWYYLLELSFYWSLVFTLPFDVKRKDFKEQIVHHAATIFLISFSYCANYIRIGTLVLVIHDAADCFLEPTKIFNYM----KWKK-TCDSLFMIFSAVFLISRLVVFPYTVLYNTYYY-SMEIFQPFFGYYFVNTLLIILQLLHVFWSCLIIRMVYKFVLQGTMEKDMRSDTEES 347          
The following BLAST results are available for this feature:
BLAST of EWM29968.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112569|gb|EWM29968.1|0.000e+0100.00transcription factor protein [Nannochloropsis gadi... [more]
gi|585101854|gb|EWM21599.1|1.076e-9143.01ceramide synthase 2 [Nannochloropsis gaditana][more]
gi|542239385|ref|XP_003452526.2|2.278e-5134.16PREDICTED: ceramide synthase 2 [Oreochromis niloti... [more]
gi|701369921|ref|XP_009962904.1|1.707e-5034.34PREDICTED: ceramide synthase 4 [Tyto alba] >gi|678... [more]
gi|410911842|ref|XP_003969399.1|4.097e-5031.86PREDICTED: ceramide synthase 2-like [Takifugu rubr... [more]
gi|583985663|ref|XP_006788079.1|5.542e-5033.33PREDICTED: ceramide synthase 2-like [Neolamprologu... [more]
gi|548411225|ref|XP_005740744.1|7.120e-5033.64PREDICTED: ceramide synthase 2-like [Pundamilia ny... [more]
gi|973161120|ref|XP_015214549.1|7.462e-5033.15PREDICTED: ceramide synthase 6 isoform X2 [Lepisos... [more]
gi|498977342|ref|XP_004549088.1|9.979e-5033.33PREDICTED: ceramide synthase 2-like [Maylandia zeb... [more]
gi|1197682720|ref|XP_021137000.1|1.755e-4934.94ceramide synthase 4 isoform X2 [Columba livia] >gi... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna704rna704Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications