EWM23632.1, cds7031 (CDS) Nannochloropsis gaditana

Overview
NameEWM23632.1
Unique Namecds7031
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002470.1:320373..321569 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM23632.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100165g13.9684.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002470.1supercontigCM002470.1:320373..321569 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM23632.1 vs. NCBI_GenBank
Match: gi|585104784|gb|EWM23632.1| (hypothetical protein Naga_100165g13 [Nannochloropsis gaditana])

HSP 1 Score: 803.127 bits (2073), Expect = 0.000e+0
Identity = 398/398 (100.00%), Postives = 398/398 (100.00%), Query Frame = 0
Query:    1 MWAFALEEAGDLHRSAEVARSVLEEDPMDDIALHALVHTYEMVAARREGREAFREEGMPPSLFAHHIAWHRAVMALGWEEGGMEEGWEAVVWRVLDDVLLKDEGRRAPATPLAMADASSLLWRMMLVGEGGGEDGEGEDRVMKRLHALRKWYQEGGYEDMHSTSFNDVHMLMCLARVDLPAAHRALASMRRLAASAGERRALNRRGRGGSQRLHRQLRNWLVCQFFRLPFPPPRSSWLQRGWCAEDEFDGRESFSVTTSSDFSSSLPTPQSTNAKVLAMVGLDVGAALIKFVEGDYAETVRLLSASAPHWHLVGGSHAQRDVLALTLITACLRNRTDLARARRLLAERAMEKDPENEEGTWTLLRQLEGQGRREGGDWEEKGCWEEKVYTRHLDNAEI 398
            MWAFALEEAGDLHRSAEVARSVLEEDPMDDIALHALVHTYEMVAARREGREAFREEGMPPSLFAHHIAWHRAVMALGWEEGGMEEGWEAVVWRVLDDVLLKDEGRRAPATPLAMADASSLLWRMMLVGEGGGEDGEGEDRVMKRLHALRKWYQEGGYEDMHSTSFNDVHMLMCLARVDLPAAHRALASMRRLAASAGERRALNRRGRGGSQRLHRQLRNWLVCQFFRLPFPPPRSSWLQRGWCAEDEFDGRESFSVTTSSDFSSSLPTPQSTNAKVLAMVGLDVGAALIKFVEGDYAETVRLLSASAPHWHLVGGSHAQRDVLALTLITACLRNRTDLARARRLLAERAMEKDPENEEGTWTLLRQLEGQGRREGGDWEEKGCWEEKVYTRHLDNAEI
Sbjct:    1 MWAFALEEAGDLHRSAEVARSVLEEDPMDDIALHALVHTYEMVAARREGREAFREEGMPPSLFAHHIAWHRAVMALGWEEGGMEEGWEAVVWRVLDDVLLKDEGRRAPATPLAMADASSLLWRMMLVGEGGGEDGEGEDRVMKRLHALRKWYQEGGYEDMHSTSFNDVHMLMCLARVDLPAAHRALASMRRLAASAGERRALNRRGRGGSQRLHRQLRNWLVCQFFRLPFPPPRSSWLQRGWCAEDEFDGRESFSVTTSSDFSSSLPTPQSTNAKVLAMVGLDVGAALIKFVEGDYAETVRLLSASAPHWHLVGGSHAQRDVLALTLITACLRNRTDLARARRLLAERAMEKDPENEEGTWTLLRQLEGQGRREGGDWEEKGCWEEKVYTRHLDNAEI 398          
BLAST of EWM23632.1 vs. NCBI_GenBank
Match: gi|1197872967|ref|WP_086799196.1| (hypothetical protein [Streptomyces scabiei])

HSP 1 Score: 73.9442 bits (180), Expect = 1.175e-10
Identity = 73/210 (34.76%), Postives = 98/210 (46.67%), Query Frame = 0
Query:    1 MWAFALEEAGDLHRSAEVARSVLEEDPMDDIALHALVHTYEMVAARREG---REAFREEGMPPSLFAHHIAWHRAVMALGWEEGGMEEGWEAVVWRVLDDVLLKDEGRRAPATPLAMADASSLLWRMMLVGEGGGEDGEGEDRVMKRLHALRKWYQEGGYEDMHSTSFNDVHMLMCLARVD-LPAAHRALASMRR--LAASAGERRALNR 204
            M+AF LEE+G   R+ EVAR+ +E +P D  A+HA+VH +EM     EG    +A  ++    SL   H  WH A+ AL       E G  A   R+ D VL  +E   +    + + DA+SLLWR +L     G + E   R +    A R        ED    +FND H +M  A    L  A   +A  RR   AA   ER   NR
Sbjct:  168 MYAFGLEESGHYDRAQEVARAAVERNPRDIWAIHAVVHVHEMQGRFAEGLGFLDARLDDWASGSLLTVHSWWHYALYAL-------EAGDTATALRIYDTVLHHEE---SSGFVMELLDAASLLWRFLL----DGSEQEARWRALADAWAAR--------EDPPFYAFNDAHAVMAFAGAGRLDTADEFVADRRRWVRAAREDERPQTNR 355          
BLAST of EWM23632.1 vs. NCBI_GenBank
Match: gi|646784155|ref|WP_025584293.1| (tetratricopeptide repeat protein 38 family protein [Cupriavidus taiwanensis])

HSP 1 Score: 73.559 bits (179), Expect = 1.468e-10
Identity = 111/375 (29.60%), Postives = 150/375 (40.00%), Query Frame = 0
Query:    1 MWAFALEEAGDLHRSAEVARSVLEEDPMDDIALHALVHTYEMVAARREG---REAFREEGMPPSLFAHHIAWHRAVMALGWEEGGMEEGWEAVVWRVLDDVLLKDEGRRAPATPLAMADASSLLWRMMLVGEGGGEDGEGEDRVMKRLHALR-KWYQEG--GYEDMHSTSFNDVHMLMCLARVDLPAAHRALASMRRLAASAGERRALNRRGRGGSQRLHRQLRNWLVCQFFRLPFPPPRSSWLQRGWCAEDEFDGRESFSVTTSSDFSSSLPTPQSTNAKVLAMVGLDVGAALIKFVEGDYAETVRLLSASAPHWHLVGGSHAQRDVLALTLITACLRN-RTDLARARRLLAERAMEKDPENEEGTWTLLRQLE 368
            M AF LEE     R+ E  R  LE  P D  A+HA+ H  EM     EG    E  R++    ++ A H  WH A+  L  E+G  +E     V  + D  +     R APA  L + DAS+LLWR+ L G   G          +R HA+   W   G  GY      +FNDVH +M            A    +R AA+   R AL R   G          N ++ +   LP                      ++    T  D+++++                            D    VRL++      H  GGSHAQRDVL LTL+ A LR+   +LA A  L AERA  K P N     +LLR ++
Sbjct:  167 MHAFGLEETQHYERAEEAGRRALECQPRDPWAVHAVAHVMEMQGRLAEGVAWLEGRRQDWADDNMLAVHNWWHLALFLL--EDGKTDE-----VLALYDRAI----SRPAPAIALDLVDASALLWRLHLRGVDVG----------RRWHAVADDWLGRGAAGY-----YAFNDVHAVM------------ASLGAQRPAAADQVRAALERAALGNGT-------NAMMSREVGLPVA--------------------DALIAFTQGDYATAI----------------------------DLLMPVRLVA------HRFGGSHAQRDVLGLTLVEAALRSGSANLALA--LTAERAALK-PMNP----SLLRLMQ 435          
BLAST of EWM23632.1 vs. NCBI_GenBank
Match: gi|501325119|ref|WP_012356754.1| (tetratricopeptide repeat-containing protein [Cupriavidus taiwanensis] >gi|193226590|emb|CAQ72541.1| conserved hypothetical protein [Cupriavidus taiwanensis LMG 19424])

HSP 1 Score: 73.1738 bits (178), Expect = 1.535e-10
Identity = 111/375 (29.60%), Postives = 150/375 (40.00%), Query Frame = 0
Query:    1 MWAFALEEAGDLHRSAEVARSVLEEDPMDDIALHALVHTYEMVAARREG---REAFREEGMPPSLFAHHIAWHRAVMALGWEEGGMEEGWEAVVWRVLDDVLLKDEGRRAPATPLAMADASSLLWRMMLVGEGGGEDGEGEDRVMKRLHALR-KWYQEG--GYEDMHSTSFNDVHMLMCLARVDLPAAHRALASMRRLAASAGERRALNRRGRGGSQRLHRQLRNWLVCQFFRLPFPPPRSSWLQRGWCAEDEFDGRESFSVTTSSDFSSSLPTPQSTNAKVLAMVGLDVGAALIKFVEGDYAETVRLLSASAPHWHLVGGSHAQRDVLALTLITACLRN-RTDLARARRLLAERAMEKDPENEEGTWTLLRQLE 368
            M AF LEE     R+ E  R  LE  P D  A+HA+ H  EM     EG    E  R++    ++ A H  WH A+  L  E+G  +E     V  + D  +     R APA  L + DAS+LLWR+ L G   G          +R HA+   W   G  GY      +FNDVH +M            A    +R AA+   R AL R   G          N ++ +   LP                      ++    T  D+++++                            D    VRL++      H  GGSHAQRDVL LTL+ A LR+   +LA A  L AERA  K P N     +LLR ++
Sbjct:  167 MHAFGLEETQHYERAEEAGRRALECQPRDPWAVHAVAHVMEMQGRLAEGVAWLEGRRQDWADDNMLAVHNWWHLALFLL--EDGKTDE-----VLALYDRAI----SRPAPAIALDLVDASALLWRLHLRGVDVG----------RRWHAVADDWLGRGAAGY-----YAFNDVHAVM------------ASLGAQRPAAADQVRAALERAALGNGT-------NAMMSREVGLPVA--------------------DALIAFTQGDYATAI----------------------------DLLMPVRLVA------HRFGGSHAQRDVLGLTLVEAALRSGSANLALA--LTAERAALK-PMNP----SLLRLMQ 435          
BLAST of EWM23632.1 vs. NCBI_GenBank
Match: gi|780319025|ref|WP_045556856.1| (tetratricopeptide repeat-containing protein [Streptomyces sp. FxanaA7] >gi|1100094711|emb|SFM52438.1| hypothetical protein SAMN04487980_1002165 [Streptomyces sp. cf124])

HSP 1 Score: 73.559 bits (179), Expect = 1.654e-10
Identity = 73/210 (34.76%), Postives = 98/210 (46.67%), Query Frame = 0
Query:    1 MWAFALEEAGDLHRSAEVARSVLEEDPMDDIALHALVHTYEMVAARREG---REAFREEGMPPSLFAHHIAWHRAVMALGWEEGGMEEGWEAVVWRVLDDVLLKDEGRRAPATPLAMADASSLLWRMMLVGEGGGEDGEGEDRVMKRLHALRKWYQEGGYEDMHSTSFNDVHMLMCLARVD-LPAAHRALASMRR--LAASAGERRALNR 204
            M+AF LEE+G   R+ EVAR+ +E +P D  A+HA+VH +EM     EG    +A  ++    SL   H  WH A+ AL       E G  A   R+ D VL  +E   +    + + DA+SLLWR +L     G + E   R +    A R        ED    +FND H +M  A    L  A   +A  RR   AA   ER   NR
Sbjct:  168 MYAFGLEESGHYDRAQEVARAAVERNPRDIWAIHAVVHVHEMQGRFAEGLGFLDARLDDWASGSLLTVHSWWHYALYAL-------EAGDTATALRIYDAVLHHEE---SSGFVMELLDAASLLWRFLL----DGSEQEARWRALADAWAAR--------EDPPFYAFNDAHAVMAFAGAGRLDTADEFVADRRRWLRAAREDERPQTNR 355          
BLAST of EWM23632.1 vs. NCBI_GenBank
Match: gi|1197854914|ref|WP_086784704.1| (hypothetical protein [Streptomyces scabiei])

HSP 1 Score: 72.0182 bits (175), Expect = 4.777e-10
Identity = 73/210 (34.76%), Postives = 98/210 (46.67%), Query Frame = 0
Query:    1 MWAFALEEAGDLHRSAEVARSVLEEDPMDDIALHALVHTYEMVAARREG---REAFREEGMPPSLFAHHIAWHRAVMALGWEEGGMEEGWEAVVWRVLDDVLLKDEGRRAPATPLAMADASSLLWRMMLVGEGGGEDGEGEDRVMKRLHALRKWYQEGGYEDMHSTSFNDVHMLMCLARVD-LPAAHRALASMRR--LAASAGERRALNR 204
            M+AF LEE+G   R+ EVAR+ +E +P D  A+HA+VH +EM     EG    +A  ++    SL   H  WH A+ AL       E G  A   R+ D VL  +E   +    + + DA+SLLWR +L     G + E   R +    A R        ED    +FND H +M  A    L  A   +A  RR   AA   ER   NR
Sbjct:  168 MYAFGLEESGHYDRAQEVARAAVERNPRDIWAIHAVVHVHEMQGRFAEGLGFLDARLDDWASGSLLTVHSWWHYALYAL-------EAGDTATALRIHDAVLHHEE---SSGFVMELLDAASLLWRFLL----DGSEQEARWRALADAWAAR--------EDPPFYAFNDAHAVMAFAGAGRLDTADEFVADRRRWLRAAREDERPQTNR 355          
BLAST of EWM23632.1 vs. NCBI_GenBank
Match: gi|501044699|ref|WP_012096515.1| (tetratricopeptide repeat-containing protein [Anaeromyxobacter sp. Fw109-5] >gi|152028171|gb|ABS25939.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter sp. Fw109-5])

HSP 1 Score: 71.2478 bits (173), Expect = 7.327e-10
Identity = 73/207 (35.27%), Postives = 94/207 (45.41%), Query Frame = 0
Query:    1 MWAFALEEAGDLHRSAEVARSVLEEDPMDDIALHALVHTYEMVAARREGREAFREEGM----PPSLFAHHIAWHRAVMALGWEEGGMEEGWEAVVWRVLDDVLLKDEGRRAPATPLAMADASSLLWRMMLVGEGGGEDGEGEDRVMKRLHALRKWYQEGGYEDMHSTSFNDVHMLMCLARVDLPAAHR------ALASMRRLAASAG 197
            M+AF LEE GD  R+ EV R  +E DP D  A HA+ H  EM     EG  A+ E+G     P + FA+H  WH A+  L   + G          RVLD    +    R+    L + DAS+LLWR+ L G G G           R  AL   ++    +D +   FNDVH LM         AHR       LA++ R A  AG
Sbjct:  168 MYAFGLEENGDYARAEEVGRRAVELDPRDGWASHAVAHVMEMQTRLPEG-IAWLEQGSRGWDPDNAFAYHNIWHLALYHLDLGDVG----------RVLDLYDTRVRPHRSDVV-LELVDASALLWRLHLGGHGVG----------ARFEALADDWRSRLADDYY--VFNDVHALMAFL-----GAHREADAGALLAAVERRAGEAG 345          
BLAST of EWM23632.1 vs. NCBI_GenBank
Match: gi|740825083|ref|WP_038610366.1| (tetratricopeptide repeat-containing protein [Pseudomonas alkylphenolica] >gi|675321175|gb|AIL61504.1| tetratricopeptide repeat protein 38 [Pseudomonas alkylphenolica])

HSP 1 Score: 70.8626 bits (172), Expect = 1.078e-9
Identity = 62/210 (29.52%), Postives = 95/210 (45.24%), Query Frame = 0
Query:    1 MWAFALEEAGDLHRSAEVARSVLEEDPMDDIALHALVHTYEMVAARREGREAFREEG---MPPSLFAHHIAWHRAVMALGWEEGGMEEGWEAVVWRVLDDVLLKDEGRRAPATPLAMADASSLLWRMMLVGEGGGEDGEGEDRVMKRLHALRKWYQ--EGGYEDMHSTSFNDVHMLMCLARV-DLPAAHRALASMRRLAASAGERRALNR 204
            M+AF LEE+GD  ++ E  R  +  +P D  A+HA+ H  EM     EG +          P S+FA H+ WH A+  +       E    A   R+ D+    D      A  L + D S+LLWR+ L+G   G+  +G            KW    E G+      +FNDV+ +M      +  A  + LA+++R AA +G    ++R
Sbjct:  167 MYAFGLEESGDYRQAEEQGREAVALNPQDGWAVHAVTHVMEMQGRSEEGAKYLTSSADAWAPNSMFAFHLWWHNALFLI-------EANDVAGALRLFDE----DISAGGFAQALELLDGSALLWRLSLLGHDVGDRWKG---------LAEKWQSRCEDGF-----YAFNDVNAMMSFVGAGNSRAQAQQLAALKRAAAGSGTNAMMSR 351          
BLAST of EWM23632.1 vs. NCBI_GenBank
Match: gi|916807785|ref|WP_051414841.1| (tetratricopeptide repeat-containing protein [Pseudomonas sp. QTF5])

HSP 1 Score: 70.4774 bits (171), Expect = 1.471e-9
Identity = 63/208 (30.29%), Postives = 96/208 (46.15%), Query Frame = 0
Query:    1 MWAFALEEAGDLHRSAEVARSVLEEDPMDDIALHALVHTYEMVAARREGREAFREEG---MPPSLFAHHIAWHRAVMALGWEEGGMEEGWEAVVWRVLDDVLLKDEGRRAPATPLAMADASSLLWRMMLVGEGGGEDGEGEDRVMKRLHALRKWYQEGGYEDMHSTSFNDVHMLMC-LARVDLPAAHRALASMRRLAASAGERRALNR 204
            M+AF LEEAGD  ++ E  R  +  +P D  A+HA+ H  EM     EG +          P S+FA H+ WH+A+  L       E    A   R+ D+    D         L + D S+LLWR+ L+G   G+  +G           +KW  E   ED    +FNDV+ +M  +   +  A  + L +++R AA +G    ++R
Sbjct:  167 MYAFGLEEAGDYRQAEEQGREAVALNPQDGWAVHAVTHVMEMQGRSEEGAKYLSSSANAWAPNSMFAFHLWWHKALFLL-------EANDVAGALRLFDE----DISAGGFGQALELLDGSALLWRLSLLGHDVGDRWKG---------LAKKW--ESRCEDGF-YAFNDVNAMMSFVGSGNSRAQAQQLDALKRAAAGSGTNAMMSR 351          
BLAST of EWM23632.1 vs. NCBI_GenBank
Match: gi|639295993|ref|WP_024588608.1| (tetratricopeptide repeat protein 38 family protein [Aliihoeflea sp. 2WW])

HSP 1 Score: 69.707 bits (169), Expect = 2.504e-9
Identity = 47/94 (50.00%), Postives = 56/94 (59.57%), Query Frame = 0
Query:  273 NAKVLAMVGLDVGAALIKFVEGDYAETVRLLSASAPHWHLVGGSHAQRDVLALTLITACLRNRTDLARARRLLAERAMEKDPENEEGTWTLLRQ 366
            NA     VG  +  AL  F  GDYA+TVRLLSA     H  GGSHAQRDV+ LTLI A +R+  D A A RL AERA+ ++     G   +LRQ
Sbjct:  343 NAGFTRDVGRPIARALHAFGRGDYAQTVRLLSAVRSRAHSFGGSHAQRDVIDLTLIEAAIRS-GDRAMAGRLTAERALRREASPMSG---ILRQ 432          
The following BLAST results are available for this feature:
BLAST of EWM23632.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585104784|gb|EWM23632.1|0.000e+0100.00hypothetical protein Naga_100165g13 [Nannochlorops... [more]
gi|1197872967|ref|WP_086799196.1|1.175e-1034.76hypothetical protein [Streptomyces scabiei][more]
gi|646784155|ref|WP_025584293.1|1.468e-1029.60tetratricopeptide repeat protein 38 family protein... [more]
gi|501325119|ref|WP_012356754.1|1.535e-1029.60tetratricopeptide repeat-containing protein [Cupri... [more]
gi|780319025|ref|WP_045556856.1|1.654e-1034.76tetratricopeptide repeat-containing protein [Strep... [more]
gi|1197854914|ref|WP_086784704.1|4.777e-1034.76hypothetical protein [Streptomyces scabiei][more]
gi|501044699|ref|WP_012096515.1|7.327e-1035.27tetratricopeptide repeat-containing protein [Anaer... [more]
gi|740825083|ref|WP_038610366.1|1.078e-929.52tetratricopeptide repeat-containing protein [Pseud... [more]
gi|916807785|ref|WP_051414841.1|1.471e-930.29tetratricopeptide repeat-containing protein [Pseud... [more]
gi|639295993|ref|WP_024588608.1|2.504e-950.00tetratricopeptide repeat protein 38 family protein... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna7048rna7048Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications