EWM23632.1, cds7031 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM23632.1 vs. NCBI_GenBank
Match: gi|585104784|gb|EWM23632.1| (hypothetical protein Naga_100165g13 [Nannochloropsis gaditana]) HSP 1 Score: 803.127 bits (2073), Expect = 0.000e+0 Identity = 398/398 (100.00%), Postives = 398/398 (100.00%), Query Frame = 0
Query: 1 MWAFALEEAGDLHRSAEVARSVLEEDPMDDIALHALVHTYEMVAARREGREAFREEGMPPSLFAHHIAWHRAVMALGWEEGGMEEGWEAVVWRVLDDVLLKDEGRRAPATPLAMADASSLLWRMMLVGEGGGEDGEGEDRVMKRLHALRKWYQEGGYEDMHSTSFNDVHMLMCLARVDLPAAHRALASMRRLAASAGERRALNRRGRGGSQRLHRQLRNWLVCQFFRLPFPPPRSSWLQRGWCAEDEFDGRESFSVTTSSDFSSSLPTPQSTNAKVLAMVGLDVGAALIKFVEGDYAETVRLLSASAPHWHLVGGSHAQRDVLALTLITACLRNRTDLARARRLLAERAMEKDPENEEGTWTLLRQLEGQGRREGGDWEEKGCWEEKVYTRHLDNAEI 398
MWAFALEEAGDLHRSAEVARSVLEEDPMDDIALHALVHTYEMVAARREGREAFREEGMPPSLFAHHIAWHRAVMALGWEEGGMEEGWEAVVWRVLDDVLLKDEGRRAPATPLAMADASSLLWRMMLVGEGGGEDGEGEDRVMKRLHALRKWYQEGGYEDMHSTSFNDVHMLMCLARVDLPAAHRALASMRRLAASAGERRALNRRGRGGSQRLHRQLRNWLVCQFFRLPFPPPRSSWLQRGWCAEDEFDGRESFSVTTSSDFSSSLPTPQSTNAKVLAMVGLDVGAALIKFVEGDYAETVRLLSASAPHWHLVGGSHAQRDVLALTLITACLRNRTDLARARRLLAERAMEKDPENEEGTWTLLRQLEGQGRREGGDWEEKGCWEEKVYTRHLDNAEI
Sbjct: 1 MWAFALEEAGDLHRSAEVARSVLEEDPMDDIALHALVHTYEMVAARREGREAFREEGMPPSLFAHHIAWHRAVMALGWEEGGMEEGWEAVVWRVLDDVLLKDEGRRAPATPLAMADASSLLWRMMLVGEGGGEDGEGEDRVMKRLHALRKWYQEGGYEDMHSTSFNDVHMLMCLARVDLPAAHRALASMRRLAASAGERRALNRRGRGGSQRLHRQLRNWLVCQFFRLPFPPPRSSWLQRGWCAEDEFDGRESFSVTTSSDFSSSLPTPQSTNAKVLAMVGLDVGAALIKFVEGDYAETVRLLSASAPHWHLVGGSHAQRDVLALTLITACLRNRTDLARARRLLAERAMEKDPENEEGTWTLLRQLEGQGRREGGDWEEKGCWEEKVYTRHLDNAEI 398
BLAST of EWM23632.1 vs. NCBI_GenBank
Match: gi|1197872967|ref|WP_086799196.1| (hypothetical protein [Streptomyces scabiei]) HSP 1 Score: 73.9442 bits (180), Expect = 1.175e-10 Identity = 73/210 (34.76%), Postives = 98/210 (46.67%), Query Frame = 0
Query: 1 MWAFALEEAGDLHRSAEVARSVLEEDPMDDIALHALVHTYEMVAARREG---REAFREEGMPPSLFAHHIAWHRAVMALGWEEGGMEEGWEAVVWRVLDDVLLKDEGRRAPATPLAMADASSLLWRMMLVGEGGGEDGEGEDRVMKRLHALRKWYQEGGYEDMHSTSFNDVHMLMCLARVD-LPAAHRALASMRR--LAASAGERRALNR 204
M+AF LEE+G R+ EVAR+ +E +P D A+HA+VH +EM EG +A ++ SL H WH A+ AL E G A R+ D VL +E + + + DA+SLLWR +L G + E R + A R ED +FND H +M A L A +A RR AA ER NR
Sbjct: 168 MYAFGLEESGHYDRAQEVARAAVERNPRDIWAIHAVVHVHEMQGRFAEGLGFLDARLDDWASGSLLTVHSWWHYALYAL-------EAGDTATALRIYDTVLHHEE---SSGFVMELLDAASLLWRFLL----DGSEQEARWRALADAWAAR--------EDPPFYAFNDAHAVMAFAGAGRLDTADEFVADRRRWVRAAREDERPQTNR 355
BLAST of EWM23632.1 vs. NCBI_GenBank
Match: gi|646784155|ref|WP_025584293.1| (tetratricopeptide repeat protein 38 family protein [Cupriavidus taiwanensis]) HSP 1 Score: 73.559 bits (179), Expect = 1.468e-10 Identity = 111/375 (29.60%), Postives = 150/375 (40.00%), Query Frame = 0
Query: 1 MWAFALEEAGDLHRSAEVARSVLEEDPMDDIALHALVHTYEMVAARREG---REAFREEGMPPSLFAHHIAWHRAVMALGWEEGGMEEGWEAVVWRVLDDVLLKDEGRRAPATPLAMADASSLLWRMMLVGEGGGEDGEGEDRVMKRLHALR-KWYQEG--GYEDMHSTSFNDVHMLMCLARVDLPAAHRALASMRRLAASAGERRALNRRGRGGSQRLHRQLRNWLVCQFFRLPFPPPRSSWLQRGWCAEDEFDGRESFSVTTSSDFSSSLPTPQSTNAKVLAMVGLDVGAALIKFVEGDYAETVRLLSASAPHWHLVGGSHAQRDVLALTLITACLRN-RTDLARARRLLAERAMEKDPENEEGTWTLLRQLE 368
M AF LEE R+ E R LE P D A+HA+ H EM EG E R++ ++ A H WH A+ L E+G +E V + D + R APA L + DAS+LLWR+ L G G +R HA+ W G GY +FNDVH +M A +R AA+ R AL R G N ++ + LP ++ T D+++++ D VRL++ H GGSHAQRDVL LTL+ A LR+ +LA A L AERA K P N +LLR ++
Sbjct: 167 MHAFGLEETQHYERAEEAGRRALECQPRDPWAVHAVAHVMEMQGRLAEGVAWLEGRRQDWADDNMLAVHNWWHLALFLL--EDGKTDE-----VLALYDRAI----SRPAPAIALDLVDASALLWRLHLRGVDVG----------RRWHAVADDWLGRGAAGY-----YAFNDVHAVM------------ASLGAQRPAAADQVRAALERAALGNGT-------NAMMSREVGLPVA--------------------DALIAFTQGDYATAI----------------------------DLLMPVRLVA------HRFGGSHAQRDVLGLTLVEAALRSGSANLALA--LTAERAALK-PMNP----SLLRLMQ 435
BLAST of EWM23632.1 vs. NCBI_GenBank
Match: gi|501325119|ref|WP_012356754.1| (tetratricopeptide repeat-containing protein [Cupriavidus taiwanensis] >gi|193226590|emb|CAQ72541.1| conserved hypothetical protein [Cupriavidus taiwanensis LMG 19424]) HSP 1 Score: 73.1738 bits (178), Expect = 1.535e-10 Identity = 111/375 (29.60%), Postives = 150/375 (40.00%), Query Frame = 0
Query: 1 MWAFALEEAGDLHRSAEVARSVLEEDPMDDIALHALVHTYEMVAARREG---REAFREEGMPPSLFAHHIAWHRAVMALGWEEGGMEEGWEAVVWRVLDDVLLKDEGRRAPATPLAMADASSLLWRMMLVGEGGGEDGEGEDRVMKRLHALR-KWYQEG--GYEDMHSTSFNDVHMLMCLARVDLPAAHRALASMRRLAASAGERRALNRRGRGGSQRLHRQLRNWLVCQFFRLPFPPPRSSWLQRGWCAEDEFDGRESFSVTTSSDFSSSLPTPQSTNAKVLAMVGLDVGAALIKFVEGDYAETVRLLSASAPHWHLVGGSHAQRDVLALTLITACLRN-RTDLARARRLLAERAMEKDPENEEGTWTLLRQLE 368
M AF LEE R+ E R LE P D A+HA+ H EM EG E R++ ++ A H WH A+ L E+G +E V + D + R APA L + DAS+LLWR+ L G G +R HA+ W G GY +FNDVH +M A +R AA+ R AL R G N ++ + LP ++ T D+++++ D VRL++ H GGSHAQRDVL LTL+ A LR+ +LA A L AERA K P N +LLR ++
Sbjct: 167 MHAFGLEETQHYERAEEAGRRALECQPRDPWAVHAVAHVMEMQGRLAEGVAWLEGRRQDWADDNMLAVHNWWHLALFLL--EDGKTDE-----VLALYDRAI----SRPAPAIALDLVDASALLWRLHLRGVDVG----------RRWHAVADDWLGRGAAGY-----YAFNDVHAVM------------ASLGAQRPAAADQVRAALERAALGNGT-------NAMMSREVGLPVA--------------------DALIAFTQGDYATAI----------------------------DLLMPVRLVA------HRFGGSHAQRDVLGLTLVEAALRSGSANLALA--LTAERAALK-PMNP----SLLRLMQ 435
BLAST of EWM23632.1 vs. NCBI_GenBank
Match: gi|780319025|ref|WP_045556856.1| (tetratricopeptide repeat-containing protein [Streptomyces sp. FxanaA7] >gi|1100094711|emb|SFM52438.1| hypothetical protein SAMN04487980_1002165 [Streptomyces sp. cf124]) HSP 1 Score: 73.559 bits (179), Expect = 1.654e-10 Identity = 73/210 (34.76%), Postives = 98/210 (46.67%), Query Frame = 0
Query: 1 MWAFALEEAGDLHRSAEVARSVLEEDPMDDIALHALVHTYEMVAARREG---REAFREEGMPPSLFAHHIAWHRAVMALGWEEGGMEEGWEAVVWRVLDDVLLKDEGRRAPATPLAMADASSLLWRMMLVGEGGGEDGEGEDRVMKRLHALRKWYQEGGYEDMHSTSFNDVHMLMCLARVD-LPAAHRALASMRR--LAASAGERRALNR 204
M+AF LEE+G R+ EVAR+ +E +P D A+HA+VH +EM EG +A ++ SL H WH A+ AL E G A R+ D VL +E + + + DA+SLLWR +L G + E R + A R ED +FND H +M A L A +A RR AA ER NR
Sbjct: 168 MYAFGLEESGHYDRAQEVARAAVERNPRDIWAIHAVVHVHEMQGRFAEGLGFLDARLDDWASGSLLTVHSWWHYALYAL-------EAGDTATALRIYDAVLHHEE---SSGFVMELLDAASLLWRFLL----DGSEQEARWRALADAWAAR--------EDPPFYAFNDAHAVMAFAGAGRLDTADEFVADRRRWLRAAREDERPQTNR 355
BLAST of EWM23632.1 vs. NCBI_GenBank
Match: gi|1197854914|ref|WP_086784704.1| (hypothetical protein [Streptomyces scabiei]) HSP 1 Score: 72.0182 bits (175), Expect = 4.777e-10 Identity = 73/210 (34.76%), Postives = 98/210 (46.67%), Query Frame = 0
Query: 1 MWAFALEEAGDLHRSAEVARSVLEEDPMDDIALHALVHTYEMVAARREG---REAFREEGMPPSLFAHHIAWHRAVMALGWEEGGMEEGWEAVVWRVLDDVLLKDEGRRAPATPLAMADASSLLWRMMLVGEGGGEDGEGEDRVMKRLHALRKWYQEGGYEDMHSTSFNDVHMLMCLARVD-LPAAHRALASMRR--LAASAGERRALNR 204
M+AF LEE+G R+ EVAR+ +E +P D A+HA+VH +EM EG +A ++ SL H WH A+ AL E G A R+ D VL +E + + + DA+SLLWR +L G + E R + A R ED +FND H +M A L A +A RR AA ER NR
Sbjct: 168 MYAFGLEESGHYDRAQEVARAAVERNPRDIWAIHAVVHVHEMQGRFAEGLGFLDARLDDWASGSLLTVHSWWHYALYAL-------EAGDTATALRIHDAVLHHEE---SSGFVMELLDAASLLWRFLL----DGSEQEARWRALADAWAAR--------EDPPFYAFNDAHAVMAFAGAGRLDTADEFVADRRRWLRAAREDERPQTNR 355
BLAST of EWM23632.1 vs. NCBI_GenBank
Match: gi|501044699|ref|WP_012096515.1| (tetratricopeptide repeat-containing protein [Anaeromyxobacter sp. Fw109-5] >gi|152028171|gb|ABS25939.1| Tetratricopeptide TPR_2 repeat protein [Anaeromyxobacter sp. Fw109-5]) HSP 1 Score: 71.2478 bits (173), Expect = 7.327e-10 Identity = 73/207 (35.27%), Postives = 94/207 (45.41%), Query Frame = 0
Query: 1 MWAFALEEAGDLHRSAEVARSVLEEDPMDDIALHALVHTYEMVAARREGREAFREEGM----PPSLFAHHIAWHRAVMALGWEEGGMEEGWEAVVWRVLDDVLLKDEGRRAPATPLAMADASSLLWRMMLVGEGGGEDGEGEDRVMKRLHALRKWYQEGGYEDMHSTSFNDVHMLMCLARVDLPAAHR------ALASMRRLAASAG 197
M+AF LEE GD R+ EV R +E DP D A HA+ H EM EG A+ E+G P + FA+H WH A+ L + G RVLD + R+ L + DAS+LLWR+ L G G G R AL ++ +D + FNDVH LM AHR LA++ R A AG
Sbjct: 168 MYAFGLEENGDYARAEEVGRRAVELDPRDGWASHAVAHVMEMQTRLPEG-IAWLEQGSRGWDPDNAFAYHNIWHLALYHLDLGDVG----------RVLDLYDTRVRPHRSDVV-LELVDASALLWRLHLGGHGVG----------ARFEALADDWRSRLADDYY--VFNDVHALMAFL-----GAHREADAGALLAAVERRAGEAG 345
BLAST of EWM23632.1 vs. NCBI_GenBank
Match: gi|740825083|ref|WP_038610366.1| (tetratricopeptide repeat-containing protein [Pseudomonas alkylphenolica] >gi|675321175|gb|AIL61504.1| tetratricopeptide repeat protein 38 [Pseudomonas alkylphenolica]) HSP 1 Score: 70.8626 bits (172), Expect = 1.078e-9 Identity = 62/210 (29.52%), Postives = 95/210 (45.24%), Query Frame = 0
Query: 1 MWAFALEEAGDLHRSAEVARSVLEEDPMDDIALHALVHTYEMVAARREGREAFREEG---MPPSLFAHHIAWHRAVMALGWEEGGMEEGWEAVVWRVLDDVLLKDEGRRAPATPLAMADASSLLWRMMLVGEGGGEDGEGEDRVMKRLHALRKWYQ--EGGYEDMHSTSFNDVHMLMCLARV-DLPAAHRALASMRRLAASAGERRALNR 204
M+AF LEE+GD ++ E R + +P D A+HA+ H EM EG + P S+FA H+ WH A+ + E A R+ D+ D A L + D S+LLWR+ L+G G+ +G KW E G+ +FNDV+ +M + A + LA+++R AA +G ++R
Sbjct: 167 MYAFGLEESGDYRQAEEQGREAVALNPQDGWAVHAVTHVMEMQGRSEEGAKYLTSSADAWAPNSMFAFHLWWHNALFLI-------EANDVAGALRLFDE----DISAGGFAQALELLDGSALLWRLSLLGHDVGDRWKG---------LAEKWQSRCEDGF-----YAFNDVNAMMSFVGAGNSRAQAQQLAALKRAAAGSGTNAMMSR 351
BLAST of EWM23632.1 vs. NCBI_GenBank
Match: gi|916807785|ref|WP_051414841.1| (tetratricopeptide repeat-containing protein [Pseudomonas sp. QTF5]) HSP 1 Score: 70.4774 bits (171), Expect = 1.471e-9 Identity = 63/208 (30.29%), Postives = 96/208 (46.15%), Query Frame = 0
Query: 1 MWAFALEEAGDLHRSAEVARSVLEEDPMDDIALHALVHTYEMVAARREGREAFREEG---MPPSLFAHHIAWHRAVMALGWEEGGMEEGWEAVVWRVLDDVLLKDEGRRAPATPLAMADASSLLWRMMLVGEGGGEDGEGEDRVMKRLHALRKWYQEGGYEDMHSTSFNDVHMLMC-LARVDLPAAHRALASMRRLAASAGERRALNR 204
M+AF LEEAGD ++ E R + +P D A+HA+ H EM EG + P S+FA H+ WH+A+ L E A R+ D+ D L + D S+LLWR+ L+G G+ +G +KW E ED +FNDV+ +M + + A + L +++R AA +G ++R
Sbjct: 167 MYAFGLEEAGDYRQAEEQGREAVALNPQDGWAVHAVTHVMEMQGRSEEGAKYLSSSANAWAPNSMFAFHLWWHKALFLL-------EANDVAGALRLFDE----DISAGGFGQALELLDGSALLWRLSLLGHDVGDRWKG---------LAKKW--ESRCEDGF-YAFNDVNAMMSFVGSGNSRAQAQQLDALKRAAAGSGTNAMMSR 351
BLAST of EWM23632.1 vs. NCBI_GenBank
Match: gi|639295993|ref|WP_024588608.1| (tetratricopeptide repeat protein 38 family protein [Aliihoeflea sp. 2WW]) HSP 1 Score: 69.707 bits (169), Expect = 2.504e-9 Identity = 47/94 (50.00%), Postives = 56/94 (59.57%), Query Frame = 0
Query: 273 NAKVLAMVGLDVGAALIKFVEGDYAETVRLLSASAPHWHLVGGSHAQRDVLALTLITACLRNRTDLARARRLLAERAMEKDPENEEGTWTLLRQ 366
NA VG + AL F GDYA+TVRLLSA H GGSHAQRDV+ LTLI A +R+ D A A RL AERA+ ++ G +LRQ
Sbjct: 343 NAGFTRDVGRPIARALHAFGRGDYAQTVRLLSAVRSRAHSFGGSHAQRDVIDLTLIEAAIRS-GDRAMAGRLTAERALRREASPMSG---ILRQ 432 The following BLAST results are available for this feature:
BLAST of EWM23632.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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