EWM29975.1, cds700 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29975.1 vs. NCBI_GenBank
Match: gi|585112578|gb|EWM29975.1| (hypothetical protein Naga_100383g4 [Nannochloropsis gaditana]) HSP 1 Score: 2425.2 bits (6284), Expect = 0.000e+0 Identity = 1192/1192 (100.00%), Postives = 1192/1192 (100.00%), Query Frame = 0 Query: 1 MIERLPQPEALKAEDWPPLTETTEAAAPSPIAAGTEIRHPKEAELLLSQGDRIEREENTQENFTNGKIMDQETSIGQAGHVKTRDDGIEIEDCSHDFACGCSEDGGNDEPHGKDNLNLSDGTVALYPHERFQYEVSPLEPGARLHHVAADIIFDRCLTYLRKDDGTMYTEGLFMLQPSMTRVRELQRRMSVGGGLEGASAWGAEGAEGEEEGRAGGRNQEETGKASPPVPSSPHEVAALLLQHLQVRPDPLIPSSLYAAWLGCQKVPGESARGGLGCSDGMARQDGVSVHILGREGDAAEASRESAAPSERRPLSPVSPNHALSDPHDEEAGGKWGDRWGDGGKENSWSAFYGADGVDKEVCEVEVAASCAARGAGEDPIPQPAGAPSGSTARGGGASLLRVKSVLCELTEKQWRQLGSLLDLMHALAKAPTGGSDLHAPTVSALGAILGPVLSRPPGSAYLSIRHTRDVPALASLGATVVEHAPELLACRGEGEQLGGGSEAHEAGQGASVVGAEDRAEREAEERGASPVRAARPWSSATASSPGHRDSRDGHERAPRALSPPCSPPVSILLSHGGPALFVSPLGDAQQSDGLPSSHGSSPLPQQNAREVEHRLLQQAEHLDRQRQQVEAARAVLTERLMPGLSKRLFSERTEDRLSQASGLVACFEEDSCPSQHNSICRTQSGRSAQLSSEQQLFGAERSNPPLPASSDTPAPPPPLTVPSVPCSPPLIPHPSSPDLKCLPHGPPVPLTPLSQQLDLDQETGKQALIVESSINGGEHEPRWREDTEGSNVSTQAQTRGWKAIEKNRAVKILQRLALTFVRRQRKRKHLTVKEQKAAPCEAARVIEVAPVLGVSEASLTVQALGPCCEARSSSPLAHPTSGVNQTCNAFTPEGDAWEAMRYWKPAIHTKTSNLEERKQVIPPLKHLLSKAASIPSSSEFQALLREKKRVKARLKKFNAAFLENHGRLPSMHDKEPMRRFYREYNLLKLQIAKALEKYQGNRQEESRGKGVGETSGRPRDGAQPETRVGESNEEASMTYWGIITPGKDSQRSGLPPPSPRRGGDLPIVYSPTRGQPSTSDNLIGGEMASMNRLCNLSQRSDSNLSEASDVQTLRREKKKLHVVLRKFESSFREQYGRRILTAKDIAPVEKQYERYIHIKSKLATLALMEKSEEISEQKETIKSRNILNTFHE 1192 MIERLPQPEALKAEDWPPLTETTEAAAPSPIAAGTEIRHPKEAELLLSQGDRIEREENTQENFTNGKIMDQETSIGQAGHVKTRDDGIEIEDCSHDFACGCSEDGGNDEPHGKDNLNLSDGTVALYPHERFQYEVSPLEPGARLHHVAADIIFDRCLTYLRKDDGTMYTEGLFMLQPSMTRVRELQRRMSVGGGLEGASAWGAEGAEGEEEGRAGGRNQEETGKASPPVPSSPHEVAALLLQHLQVRPDPLIPSSLYAAWLGCQKVPGESARGGLGCSDGMARQDGVSVHILGREGDAAEASRESAAPSERRPLSPVSPNHALSDPHDEEAGGKWGDRWGDGGKENSWSAFYGADGVDKEVCEVEVAASCAARGAGEDPIPQPAGAPSGSTARGGGASLLRVKSVLCELTEKQWRQLGSLLDLMHALAKAPTGGSDLHAPTVSALGAILGPVLSRPPGSAYLSIRHTRDVPALASLGATVVEHAPELLACRGEGEQLGGGSEAHEAGQGASVVGAEDRAEREAEERGASPVRAARPWSSATASSPGHRDSRDGHERAPRALSPPCSPPVSILLSHGGPALFVSPLGDAQQSDGLPSSHGSSPLPQQNAREVEHRLLQQAEHLDRQRQQVEAARAVLTERLMPGLSKRLFSERTEDRLSQASGLVACFEEDSCPSQHNSICRTQSGRSAQLSSEQQLFGAERSNPPLPASSDTPAPPPPLTVPSVPCSPPLIPHPSSPDLKCLPHGPPVPLTPLSQQLDLDQETGKQALIVESSINGGEHEPRWREDTEGSNVSTQAQTRGWKAIEKNRAVKILQRLALTFVRRQRKRKHLTVKEQKAAPCEAARVIEVAPVLGVSEASLTVQALGPCCEARSSSPLAHPTSGVNQTCNAFTPEGDAWEAMRYWKPAIHTKTSNLEERKQVIPPLKHLLSKAASIPSSSEFQALLREKKRVKARLKKFNAAFLENHGRLPSMHDKEPMRRFYREYNLLKLQIAKALEKYQGNRQEESRGKGVGETSGRPRDGAQPETRVGESNEEASMTYWGIITPGKDSQRSGLPPPSPRRGGDLPIVYSPTRGQPSTSDNLIGGEMASMNRLCNLSQRSDSNLSEASDVQTLRREKKKLHVVLRKFESSFREQYGRRILTAKDIAPVEKQYERYIHIKSKLATLALMEKSEEISEQKETIKSRNILNTFHE Sbjct: 1 MIERLPQPEALKAEDWPPLTETTEAAAPSPIAAGTEIRHPKEAELLLSQGDRIEREENTQENFTNGKIMDQETSIGQAGHVKTRDDGIEIEDCSHDFACGCSEDGGNDEPHGKDNLNLSDGTVALYPHERFQYEVSPLEPGARLHHVAADIIFDRCLTYLRKDDGTMYTEGLFMLQPSMTRVRELQRRMSVGGGLEGASAWGAEGAEGEEEGRAGGRNQEETGKASPPVPSSPHEVAALLLQHLQVRPDPLIPSSLYAAWLGCQKVPGESARGGLGCSDGMARQDGVSVHILGREGDAAEASRESAAPSERRPLSPVSPNHALSDPHDEEAGGKWGDRWGDGGKENSWSAFYGADGVDKEVCEVEVAASCAARGAGEDPIPQPAGAPSGSTARGGGASLLRVKSVLCELTEKQWRQLGSLLDLMHALAKAPTGGSDLHAPTVSALGAILGPVLSRPPGSAYLSIRHTRDVPALASLGATVVEHAPELLACRGEGEQLGGGSEAHEAGQGASVVGAEDRAEREAEERGASPVRAARPWSSATASSPGHRDSRDGHERAPRALSPPCSPPVSILLSHGGPALFVSPLGDAQQSDGLPSSHGSSPLPQQNAREVEHRLLQQAEHLDRQRQQVEAARAVLTERLMPGLSKRLFSERTEDRLSQASGLVACFEEDSCPSQHNSICRTQSGRSAQLSSEQQLFGAERSNPPLPASSDTPAPPPPLTVPSVPCSPPLIPHPSSPDLKCLPHGPPVPLTPLSQQLDLDQETGKQALIVESSINGGEHEPRWREDTEGSNVSTQAQTRGWKAIEKNRAVKILQRLALTFVRRQRKRKHLTVKEQKAAPCEAARVIEVAPVLGVSEASLTVQALGPCCEARSSSPLAHPTSGVNQTCNAFTPEGDAWEAMRYWKPAIHTKTSNLEERKQVIPPLKHLLSKAASIPSSSEFQALLREKKRVKARLKKFNAAFLENHGRLPSMHDKEPMRRFYREYNLLKLQIAKALEKYQGNRQEESRGKGVGETSGRPRDGAQPETRVGESNEEASMTYWGIITPGKDSQRSGLPPPSPRRGGDLPIVYSPTRGQPSTSDNLIGGEMASMNRLCNLSQRSDSNLSEASDVQTLRREKKKLHVVLRKFESSFREQYGRRILTAKDIAPVEKQYERYIHIKSKLATLALMEKSEEISEQKETIKSRNILNTFHE 1192
BLAST of EWM29975.1 vs. NCBI_GenBank
Match: gi|585103553|gb|EWM22894.1| (hypothetical protein Naga_100320g4 [Nannochloropsis gaditana]) HSP 1 Score: 298.516 bits (763), Expect = 7.364e-91 Identity = 146/156 (93.59%), Postives = 148/156 (94.87%), Query Frame = 0 Query: 1037 MTYWGIITPGKDSQRSGLPPPSPRRGGDLPIVYSPTRGQPSTSDNLIGGEMASMNRLCNLSQRSDSNLSEASDVQTLRREKKKLHVVLRKFESSFREQYGRRILTAKDIAPVEKQYERYIHIKSKLATLALMEKSEEISEQKETIKSRNILNTFHE 1192 MTYWGIITPGKDS+RSGLPPPSPRRG DLPIVYSP RGQPST DNLIGGEM SMNRLC+L QRSDSNLSEASDVQTLRREKK LHVVLRKFESSFREQYGRRILTAKDIAPVEKQYERYIHIKSKLATLA MEKSEEISEQKETIKSRNILNT HE Sbjct: 1 MTYWGIITPGKDSKRSGLPPPSPRRGDDLPIVYSPKRGQPSTHDNLIGGEMTSMNRLCSLFQRSDSNLSEASDVQTLRREKKWLHVVLRKFESSFREQYGRRILTAKDIAPVEKQYERYIHIKSKLATLASMEKSEEISEQKETIKSRNILNTSHE 156
BLAST of EWM29975.1 vs. NCBI_GenBank
Match: gi|585112691|gb|EWM30059.1| (hypothetical protein Naga_100170g1 [Nannochloropsis gaditana]) HSP 1 Score: 205.297 bits (521), Expect = 6.300e-58 Identity = 107/156 (68.59%), Postives = 110/156 (70.51%), Query Frame = 0 Query: 1037 MTYWGIITPGKDSQRSGLPPPSPRRGGDLPIVYSPTRGQPSTSDNLIGGEMASMNRLCNLSQRSDSNLSEASDVQTLRREKKKLHVVLRKFESSFREQYGRRILTAKDIAPVEKQYERYIHIKSKLATLALMEKSEEISEQKETIKSRNILNTFHE 1192 MTYWGI+TPGKDS+RSGLP PSPRRG DLPIVYSPT+GQPST DNLIGGEM SMNRLCNLSQ RRILT DIAPVEKQYERYIHIKSKLATLA MEKSEEISEQKETIKSRNILNTF E Sbjct: 1 MTYWGIVTPGKDSKRSGLPLPSPRRGDDLPIVYSPTQGQPSTHDNLIGGEMTSMNRLCNLSQ--------------------------------------RRILTVNDIAPVEKQYERYIHIKSKLATLASMEKSEEISEQKETIKSRNILNTFRE 118
BLAST of EWM29975.1 vs. NCBI_GenBank
Match: gi|224008863|ref|XP_002293390.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220970790|gb|EED89126.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 82.0333 bits (201), Expect = 5.588e-12 Identity = 65/227 (28.63%), Postives = 103/227 (45.37%), Query Frame = 0 Query: 943 LLREKKRVKARLKKFNAAFLENHGRLPSMHDKEPMRRFYREYNLLKLQIAKALEKYQGNRQEESRGKGVGETSGRPRDGAQPETRVGESNEEASMTYWGIITPGKDSQRSGLPPPSPRRGGDLPIVYSP----TRGQPSTSDNLIGGEMASMNRLCNLSQRSDSNLSEASDVQTLRREKKKLHVVLRKFESSFREQYGRRILTAKDIAPVEKQYERYIHIKSKLATL 1165 L + K+ +K +LK ++ F HGR+P +KEP+R Y YN K QI+ A+EK + G G T+ R R +S + A+ +P ++S P+ D P SP + P + I E + SQ D+ + D+ +L+ EK LH +LR +E F +Q+ R++ + DI PV QY RY IK ++ + Sbjct: 943 LQQRKRELKQQLKMYDLNFHAQHGRMPEKREKEPIRHLYESYNAYKNQIS-AIEKGEAE-------PGPGTTAFRGR---------SDSADAANTISSADSSPDRNS-------PT-----DNPSNVSPGQVNMKSSPKNASEFIDDEE-------DTSQNDDNVRGVSQDLSSLKAEKATLHQMLRSYEKDFFKQHKRQVSSFSDIRPVASQYRRYKEIKKAISAM 1133
BLAST of EWM29975.1 vs. NCBI_GenBank
Match: gi|873231941|emb|CEM06834.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 76.6406 bits (187), Expect = 7.237e-11 Identity = 74/233 (31.76%), Postives = 103/233 (44.21%), Query Frame = 0 Query: 943 LLREKKRVKARLKKFNAAFLENHGRLPSMHDKEPMRRFYREYNLLKLQIAKALEKYQGN--RQEESRGKGVGETSGRPRDGAQPETRV-GESNEEASMTYWGIITPGKDSQRSGLPPPSPRRGGDLPIVYSPTRGQ----PSTSDNLIGGEMASMNRLCNLSQRSDSNLSEASDVQTLRREKKKLHVVLRKFESSFREQYGRRILTAKDIAPVEKQYERYIHIKSKLATLALM 1168 L REKK+VK+ LKK++ AF +GRLP+ +KEPMR Y Y LK I QG Q SR + +S + + GA+ + V G S S +D SG P R P R Q P+ S N GE QR D L REK +L VL+K+++ F + R+I KDI P+E++Y+ Y K ++ L + Sbjct: 188 LEREKKQVKSELKKYDTAFESAYGRLPNRKEKEPMRPLYCYYRKLKAMIGNVSTSRQGYALSQRSSRDRRATPSSQQQQGGAKSGSAVSGRSEVPLSEVPSSRGDSAQDLGESGARAPRHR---------EPARQQGVDVPAASSNNDEGE--------RYRQRLDQ----------LYREKTRLRHVLQKYQTKFMAENSRKIRFHKDILPIEREYKCYKQCKQEIQRLTSL 393
BLAST of EWM29975.1 vs. NCBI_GenBank
Match: gi|678316873|emb|CDW86088.1| (UNKNOWN [Stylonychia lemnae]) HSP 1 Score: 74.7146 bits (182), Expect = 2.559e-10 Identity = 64/232 (27.59%), Postives = 99/232 (42.67%), Query Frame = 0 Query: 946 EKKRVKARLKKFNAAFLENHGRLPSMHDKEPMRRFYREYNLLKLQIAKALEKYQGNRQEESRGKGVGETSGRPRDG---------------AQPETRVGESNEEASMTYWGIITPGKDSQRSGLPPPSPRRGGDLPIVYSPTRGQPSTSDNLIGGEMASMNRLCNLSQRSDSNLSEASDVQTLRREKKKLHVVLRKFESSFREQYGRRILTAKDIAPVEKQYERYIHIKSKL 1162 EKK+VK LK+++ +FL RLP+ +KEPMR Y Y LK I K + R + +G PR+G +QP+TR +S+ G ++ G S P + D + + +T + GG + L +E V+ L+ E+K L L KF+ F + R+I KDIAPV +++RY +K +L Sbjct: 122 EKKKVKNELKQYDQSFLNKFNRLPNRPEKEPMRNIYMYYKRLKQAITKTQAIGG--AGGQGRSQSMGAARQNPRNGYIQMGSQPQPQHQSMSQPQTRA------SSIASSGQLSSGYLSDNVA-NPEEQKYEEDKLVNAQVSSLVTNTQSSTTGGSQSDSQYLMKKYNLRSIFDAERKAVE-LKNERKGLRTKLDKFQKDFETNHKRKIAYTKDIAPVASEFKRYRELKIEL 343 The following BLAST results are available for this feature:
BLAST of EWM29975.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 6
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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