EWM23700.1, cds6999 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM23700.1 vs. NCBI_GenBank
Match: gi|585104854|gb|EWM23700.1| (cysteinyl-trna synthetase [Nannochloropsis gaditana]) HSP 1 Score: 1250.73 bits (3235), Expect = 0.000e+0 Identity = 611/611 (100.00%), Postives = 611/611 (100.00%), Query Frame = 0 Query: 1 MSFPGRPRGALETLARSTYFVNLPRLTLSAVLTRNRRHFGASSSPLIPLLKKSAERPSLEALKWYACGPTVYDSAHLGHARTYVSQDVIRRVLTDFLGQDVIFVMGITDVDDKILQRAMERKEDPRALARRYEADFLADMRALNVLEPSALVRVTEHIRDIIDYIKQIDTNGMAYETSSGVYFDVRAFSKKFAYGKLKTKDRVRSANAEAPVGREEGQQERIGVDVVGMDEKKDLRDFVLWKFNKPGEAAMSWDSPWGRGRPGWHIECSAMTQHLLGPHLDIHSGGVDLCFPHHTNEIAQSDAFRMSEDPAWVGAWLHTGHLYIKGLKMSKSLKNFISVREFLAGHDADDFRMFCLQRRFDADVDYSESALLEARSLRQVFINFVSLAQQRVHVLSRDGCKRWGAKEFEIMAELARVKVGVRKAFVQGGLDTPQVLRLLRDLVGLGHEYLRQGDGKAEERDGTEARGEVVSNLAAYVAKLLALLGLRCFNQFTLLHRGSLSGADVESLAKSLVDFRARVRAAALEGRRRRPRDGSDVEEKEGTTAALAQRLLVLCDEFRERDLIELGIQVKDTGVGECSWTLASPSSAPCEAADQKLDVPGVTLLASRRPK 611 MSFPGRPRGALETLARSTYFVNLPRLTLSAVLTRNRRHFGASSSPLIPLLKKSAERPSLEALKWYACGPTVYDSAHLGHARTYVSQDVIRRVLTDFLGQDVIFVMGITDVDDKILQRAMERKEDPRALARRYEADFLADMRALNVLEPSALVRVTEHIRDIIDYIKQIDTNGMAYETSSGVYFDVRAFSKKFAYGKLKTKDRVRSANAEAPVGREEGQQERIGVDVVGMDEKKDLRDFVLWKFNKPGEAAMSWDSPWGRGRPGWHIECSAMTQHLLGPHLDIHSGGVDLCFPHHTNEIAQSDAFRMSEDPAWVGAWLHTGHLYIKGLKMSKSLKNFISVREFLAGHDADDFRMFCLQRRFDADVDYSESALLEARSLRQVFINFVSLAQQRVHVLSRDGCKRWGAKEFEIMAELARVKVGVRKAFVQGGLDTPQVLRLLRDLVGLGHEYLRQGDGKAEERDGTEARGEVVSNLAAYVAKLLALLGLRCFNQFTLLHRGSLSGADVESLAKSLVDFRARVRAAALEGRRRRPRDGSDVEEKEGTTAALAQRLLVLCDEFRERDLIELGIQVKDTGVGECSWTLASPSSAPCEAADQKLDVPGVTLLASRRPK Sbjct: 1 MSFPGRPRGALETLARSTYFVNLPRLTLSAVLTRNRRHFGASSSPLIPLLKKSAERPSLEALKWYACGPTVYDSAHLGHARTYVSQDVIRRVLTDFLGQDVIFVMGITDVDDKILQRAMERKEDPRALARRYEADFLADMRALNVLEPSALVRVTEHIRDIIDYIKQIDTNGMAYETSSGVYFDVRAFSKKFAYGKLKTKDRVRSANAEAPVGREEGQQERIGVDVVGMDEKKDLRDFVLWKFNKPGEAAMSWDSPWGRGRPGWHIECSAMTQHLLGPHLDIHSGGVDLCFPHHTNEIAQSDAFRMSEDPAWVGAWLHTGHLYIKGLKMSKSLKNFISVREFLAGHDADDFRMFCLQRRFDADVDYSESALLEARSLRQVFINFVSLAQQRVHVLSRDGCKRWGAKEFEIMAELARVKVGVRKAFVQGGLDTPQVLRLLRDLVGLGHEYLRQGDGKAEERDGTEARGEVVSNLAAYVAKLLALLGLRCFNQFTLLHRGSLSGADVESLAKSLVDFRARVRAAALEGRRRRPRDGSDVEEKEGTTAALAQRLLVLCDEFRERDLIELGIQVKDTGVGECSWTLASPSSAPCEAADQKLDVPGVTLLASRRPK 611
BLAST of EWM23700.1 vs. NCBI_GenBank
Match: gi|669155348|ref|XP_008613236.1| (cysteinyl-tRNA synthetase [Saprolegnia diclina VS20] >gi|530734871|gb|EQC33113.1| cysteinyl-tRNA synthetase [Saprolegnia diclina VS20]) HSP 1 Score: 399.053 bits (1024), Expect = 5.644e-128 Identity = 242/587 (41.23%), Postives = 320/587 (54.51%), Query Frame = 0 Query: 33 TRNRRHFGASSSPLIPLLKKSAERPSLEA-----LKWYACGPTVYDSAHLGHARTYVSQDVIRRVLTDFLGQDVIFVMGITDVDDKILQRAMERKEDPRALARRYEADFLADMRALNVLEPSALVRVTEHIRDIIDYIKQIDTNGMAYETSSGVYFDVRAFSKKFAYGKLKTKDRVRSANAEAPVGREEGQQERIGVDVVGMDEKKDLRDFVLWKFNKPGEAAMSWDSPWGRGRPGWHIECSAMTQHLLGPHLDIHSGGVDLCFPHHTNEIAQSDAF-RMSEDPAWVGAWLHTGHLYIKGLKMSKSLKNFISVREFLA--GHDADDFRMFCLQRRFDADVDYSESALLEARSLRQVFINFVSLAQQRVHVLSRDGC--KRWGAKEFEIMAELARVKVGVRKAFVQGGLDTPQVLRLLRDLVGLGHEYLRQGDGKAEERDGTEARGEVVSNLAAYVAKLLALLGLR----CFNQFTLLHRGSLSG-----ADVESLAKSLVDFRARVRAAALEGRRRRPRDGSDVEEKEGTTAALAQRLLVLCDEFRERDLIELGIQVKDTGVGECSW---TLASPSSAPCEAADQKL 597 T RR + P+ L S + L LKWY CGPTVYDSAHLGHAR+YVSQD++RRVLT + D+ VMG+TDVDDKI+ ++ + A+AR +EA FLAD+ +LNVL SA+ RV+EHI +I+ YIK ++ NG AY TS GVYFD A K YGKL AP E D EK+++RDF LWK +K + WDS +GRGRPGWHIECSAMT H+LG +D+HSGG+DLCFPHH NE+AQ D + + W ++H GHLYIKGLKMSKSLKNFIS+++FL+ G +D FR+FCLQ +++ +V +SE + +A L Q F +F Q + L++ +R ++ LA KV V +A ++ DTP VL L L+ L H ++ D EVV +AAYV + L L GL F+ L + + A ES+ FRARVR AAL P+D +Q +L LCD R L LGIQ+ D G W T+ +AP + +L Sbjct: 11 TTGRRLLSTAPRPISALNSLSGKVEPLPVASSGPLKWYVCGPTVYDSAHLGHARSYVSQDILRRVLTGYFRHDINLVMGMTDVDDKIIATSLREGKPMEAVARHHEAAFLADLASLNVLRASAITRVSEHIPEILAYIKTLEANGFAYTTSDGVYFDTVALGAK--YGKL------------APNAATEISDVAASDDSGIGSEKRNVRDFALWKRSKTADEP-GWDSRYGRGRPGWHIECSAMTHHVLGGAIDVHSGGIDLCFPHHNNEVAQCDGYHHTTAGHTWCKHFIHFGHLYIKGLKMSKSLKNFISIQDFLSAPGSSSDAFRLFCLQYKYNTNVHFSEDRMRDANVLLQRFTSFF----QSIVGLTKASTLHRRLETPNDVLLTALAEAKVEVDRA-LRNDFDTPAVLLQLTQLISLVHREVQSRDISI----------EVVCRVAAYVLETLHLFGLNKSLAGFSSIALAAPVATTDAGAGLAHAESILDEFTAFRARVRQAALTN----PKDPQ------------SQTILALCDRLRNETLPPLGIQIDDVAPGTSHWKAQTMIEADAAPVDPVKVQL 551
BLAST of EWM23700.1 vs. NCBI_GenBank
Match: gi|698779185|ref|XP_009822636.1| (cysteine-tRNA ligase, variant 3 [Aphanomyces astaci] >gi|574122298|gb|ETV87774.1| cysteine-tRNA ligase, variant 3 [Aphanomyces astaci]) HSP 1 Score: 397.127 bits (1019), Expect = 1.704e-127 Identity = 246/597 (41.21%), Postives = 324/597 (54.27%), Query Frame = 0 Query: 1 MSFPGRPRGALETLARSTYFVNLPRLTLSAVLTRNRRHFGASSSPLIPLLKKSAERPSLEALKWYACGPTVYDSAHLGHARTYVSQDVIRRVLTDFLGQDVIFVMGITDVDDKILQRAMERKEDPRALARRYEADFLADMRALNVLEPSALVRVTEHIRDIIDYIKQIDTNGMAYETSSGVYFDVRAFSKKFAYGKLKTKDRVRSANAEAPVGREEGQQERIGVDVVGMDEKKDLRDFVLWKFNK-PGEAAMSWDSPWGRGRPGWHIECSAMTQHLLGPHLDIHSGGVDLCFPHHTNEIAQSDAFRMSE-DPAWVGAWLHTGHLYIKGLKMSKSLKNFISVREFLAGHDADDFRMFCLQRRFDADVDYSESALLEARSLRQVFINFVSLAQQRVHVLSRDG----CKRWGAKEFEIMAELARVKVGVRKAFVQGGLDTPQVLRLLRDLVGLGHEYLRQGDGKAEERDGTEARGEVVSNLAAYVAKLLALLGLRCFNQFTL-----------LHRGSLSGADVESLAKSLVDFRARVRAAALEGRRRRPRDGSDVEEKEGTTAALAQRLLVLCDEFRERDLIELGIQVKDTGVGECSW 580 ++F GRP L T V+ P L LT F +SSSPL KWY CGPTVYDSAHLGHAR+YVSQD++RR++T QD+ VMG+TDVDDKI+ A ++ +AR +E FL ++ ALNVL S++ RV+EHI +II YI+ +D+NG AY TS GVYFD A +YGKL AP +E + VG EK+++RDF LWK +K P E W+SPWGRGRPGWHIECSAMT H+LG +D+HSGGVDL FPHH NEIAQ DA+ + D W ++H GHLYIKGLKMSKSLKNFI++ LA + AD FR+FCLQ +++ +V +S + +A ++ F +F Q V G +R A +F ++ LA+ K+ V A ++ DTP L+ L +LV KA D EV+ +A YV LAL GL +L ++ GADV + FRA+VRA AL T+ +AQ +L LCD R+ L LGIQ++D G+ W Sbjct: 8 LTFHGRPMRRLST------GVSKPPLVAMNSLTGRLDTFPSSSSPL----------------KWYVCGPTVYDSAHLGHARSYVSQDILRRIVTQHFHQDIFLVMGMTDVDDKIIAAASAQQTSMANVARHHETAFLRNLAALNVLRVSSITRVSEHIPEIIGYIQGLDSNGFAYATSDGVYFDTVAMGS--SYGKL------------APSTPQEYTDIVLEDGAVG-GEKRNVRDFALWKLSKTPDEPG--WESPWGRGRPGWHIECSAMTHHVLGGSIDVHSGGVDLRFPHHNNEIAQCDAYHHHQADHTWCQHFVHFGHLYIKGLKMSKSLKNFITIDALLANYSADAFRLFCLQYKYNVNVHFSHDRMRDANAVYHRFHSFFHTLQSHVKATEAGGASEHARRVDAADFRVLDALAQCKLEVDSA-LRLDFDTPGALQHLLELV--------TATNKAWT-DRPAMSVEVLCAVATYVMDTLALFGLDALRFPSLRLAAPVADDAASQSNAIQGADVMDV---FTTFRAQVRALAL----------------TNTSDKVAQDILKLCDTVRDAQLPSLGIQIEDISPGKSFW 536
BLAST of EWM23700.1 vs. NCBI_GenBank
Match: gi|698779183|ref|XP_009822635.1| (cysteine-tRNA ligase, variant 1 [Aphanomyces astaci] >gi|574122296|gb|ETV87772.1| cysteine-tRNA ligase, variant 1 [Aphanomyces astaci]) HSP 1 Score: 397.127 bits (1019), Expect = 3.308e-127 Identity = 246/597 (41.21%), Postives = 324/597 (54.27%), Query Frame = 0 Query: 1 MSFPGRPRGALETLARSTYFVNLPRLTLSAVLTRNRRHFGASSSPLIPLLKKSAERPSLEALKWYACGPTVYDSAHLGHARTYVSQDVIRRVLTDFLGQDVIFVMGITDVDDKILQRAMERKEDPRALARRYEADFLADMRALNVLEPSALVRVTEHIRDIIDYIKQIDTNGMAYETSSGVYFDVRAFSKKFAYGKLKTKDRVRSANAEAPVGREEGQQERIGVDVVGMDEKKDLRDFVLWKFNK-PGEAAMSWDSPWGRGRPGWHIECSAMTQHLLGPHLDIHSGGVDLCFPHHTNEIAQSDAFRMSE-DPAWVGAWLHTGHLYIKGLKMSKSLKNFISVREFLAGHDADDFRMFCLQRRFDADVDYSESALLEARSLRQVFINFVSLAQQRVHVLSRDG----CKRWGAKEFEIMAELARVKVGVRKAFVQGGLDTPQVLRLLRDLVGLGHEYLRQGDGKAEERDGTEARGEVVSNLAAYVAKLLALLGLRCFNQFTL-----------LHRGSLSGADVESLAKSLVDFRARVRAAALEGRRRRPRDGSDVEEKEGTTAALAQRLLVLCDEFRERDLIELGIQVKDTGVGECSW 580 ++F GRP L T V+ P L LT F +SSSPL KWY CGPTVYDSAHLGHAR+YVSQD++RR++T QD+ VMG+TDVDDKI+ A ++ +AR +E FL ++ ALNVL S++ RV+EHI +II YI+ +D+NG AY TS GVYFD A +YGKL AP +E + VG EK+++RDF LWK +K P E W+SPWGRGRPGWHIECSAMT H+LG +D+HSGGVDL FPHH NEIAQ DA+ + D W ++H GHLYIKGLKMSKSLKNFI++ LA + AD FR+FCLQ +++ +V +S + +A ++ F +F Q V G +R A +F ++ LA+ K+ V A ++ DTP L+ L +LV KA D EV+ +A YV LAL GL +L ++ GADV + FRA+VRA AL T+ +AQ +L LCD R+ L LGIQ++D G+ W Sbjct: 8 LTFHGRPMRRLST------GVSKPPLVAMNSLTGRLDTFPSSSSPL----------------KWYVCGPTVYDSAHLGHARSYVSQDILRRIVTQHFHQDIFLVMGMTDVDDKIIAAASAQQTSMANVARHHETAFLRNLAALNVLRVSSITRVSEHIPEIIGYIQGLDSNGFAYATSDGVYFDTVAMGS--SYGKL------------APSTPQEYTDIVLEDGAVG-GEKRNVRDFALWKLSKTPDEPG--WESPWGRGRPGWHIECSAMTHHVLGGSIDVHSGGVDLRFPHHNNEIAQCDAYHHHQADHTWCQHFVHFGHLYIKGLKMSKSLKNFITIDALLANYSADAFRLFCLQYKYNVNVHFSHDRMRDANAVYHRFHSFFHTLQSHVKATEAGGASEHARRVDAADFRVLDALAQCKLEVDSA-LRLDFDTPGALQHLLELV--------TATNKAWT-DRPAMSVEVLCAVATYVMDTLALFGLDALRFPSLRLAAPVADDAASQSNAIQGADVMDV---FTTFRAQVRALAL----------------TNTSDKVAQDILKLCDTVRDAQLPSLGIQIEDISPGKSFW 536
BLAST of EWM23700.1 vs. NCBI_GenBank
Match: gi|1173938767|gb|OQR88857.1| (cysteinyl-tRNA synthetase [Achlya hypogyna]) HSP 1 Score: 395.201 bits (1014), Expect = 2.446e-126 Identity = 241/563 (42.81%), Postives = 322/563 (57.19%), Query Frame = 0 Query: 37 RHFGASSSPLIPLLKKSAERPSL----EALKWYACGPTVYDSAHLGHARTYVSQDVIRRVLTDFLGQDVIFVMGITDVDDKILQRAMERKEDPRALARRYEADFLADMRALNVLEPSALVRVTEHIRDIIDYIKQIDTNGMAYETSSGVYFDVRAFSKKFAYGKLKTKDRVRSANAEAPVGREEGQQERIGVDVVGM-DEKKDLRDFVLWKFNKPGEAAMSWDSPWGRGRPGWHIECSAMTQHLLGPHLDIHSGGVDLCFPHHTNEIAQSDAF-RMSEDPAWVGAWLHTGHLYIKGLKMSKSLKNFISVREFLA--GHDADDFRMFCLQRRFDADVDYSESALLEARSLRQVFINFVSLAQQRVHVLSRDG--CKRWGAKEFEIMAELARVKVGVRKAFVQGGLDTPQVLRLLRDLVGLGHEYLRQGDGKAEERDGTEARGEVVSNLAAYVAKLLALLGL-RCFNQFTLLHRGSLSGADVESL----AKSLVD----FRARVRAAALEGRRRRPRDGSDVEEKEGTTAALAQRLLVLCDEFRERDLIELGIQVKDTGVGECSW 580 RH S++ + L S + L LKWY CGPTVYDSAHLGHAR+YVSQD++RRVLT + QD+ VMG+TDVDDKI+ A+ A+AR++EA FL+D+ ALNVL SA+ RV+EHI +I+ YI ++ NG AY T+ GVYFD A YGKL AP E I VD G+ EK++ RDF LWK +K + WDS +GRGRPGWHIECSAMT H+LG +D+HSGG+DLCFPHH NE+AQ D + + W ++H GHLYIKGLKMSKSLKNFIS+R+FL+ G +D FR+FCLQ +++ +V +S + +A L Q F++F Q V LS+ C+R + ++ LAR K V +A ++ DTP VL L L+ L H L+ G +VV +AAYV ++ L GL + F+ + + + A E+ A +++D FRARVR AL R P+D Q +L LCD R+ L LGIQ++D G W Sbjct: 17 RHLSTSTASVHALNSLSGKMDPLPLGSRPLKWYVCGPTVYDSAHLGHARSYVSQDILRRVLTTYFRQDINLVMGMTDVDDKIIATALREGRSMEAVARQHEAAFLSDLAALNVLRASAITRVSEHIPEILAYITTLERNGFAYRTTDGVYFDTVALGDD--YGKL------------APNAATEATD--IVVDDNGIGSEKRNSRDFALWKRSKTTDEP-GWDSDFGRGRPGWHIECSAMTHHVLGGAIDVHSGGIDLCFPHHNNEVAQCDGYHHHTPGHTWCKHFVHFGHLYIKGLKMSKSLKNFISIRDFLSEPGASSDAFRVFCLQYKYNTNVHFSLDRMRDANVLLQRFVSFF----QTVLALSKSPELCRRLETPDDPLLLGLARAKTAVDRA-MRDDFDTPSVLVELTALMSLVHRELQARPGAVSV--------DVVCRVAAYVLEMCQLFGLQQSIAGFSSVALAAPTSAAHEASGLEHANAILDEFSAFRARVRQVAL----RNPKDPQ------------CQDILKLCDILRDSTLPPLGIQIEDVAPGTAHW 533
BLAST of EWM23700.1 vs. NCBI_GenBank
Match: gi|698779187|ref|XP_009822637.1| (cysteine-tRNA ligase, variant 2 [Aphanomyces astaci] >gi|574122297|gb|ETV87773.1| cysteine-tRNA ligase, variant 2 [Aphanomyces astaci]) HSP 1 Score: 390.578 bits (1002), Expect = 8.275e-125 Identity = 246/613 (40.13%), Postives = 324/613 (52.85%), Query Frame = 0 Query: 1 MSFPGRPRGALETLARSTYFVNLPRLTLSAVLTRNRRHFGASSSPLIPLLKKSAERPSLEALKWYACGPTVYDSAHLGHARTYVSQDVIRRVLTDFLGQDVIFVMGITDVDDKILQRAMERKEDPRALARRYEADFLADMRALNVLEPSALVRVTEHIRDIIDYIKQIDTNGMAYETSSGVYFDVRAFSKKFAYGKLKTKDRVRSANAEAPVGREEGQQERIGVDVVGMDEKKDLRDFVLWKFNK-PGEAAMSWDSPWGRGRPGWHIECSAMTQHLLGPHLDIHSGGVDLCFPHHTNEIAQSDAFRMSE-----------------DPAWVGAWLHTGHLYIKGLKMSKSLKNFISVREFLAGHDADDFRMFCLQRRFDADVDYSESALLEARSLRQVFINFVSLAQQRVHVLSRDG----CKRWGAKEFEIMAELARVKVGVRKAFVQGGLDTPQVLRLLRDLVGLGHEYLRQGDGKAEERDGTEARGEVVSNLAAYVAKLLALLGLRCFNQFTL-----------LHRGSLSGADVESLAKSLVDFRARVRAAALEGRRRRPRDGSDVEEKEGTTAALAQRLLVLCDEFRERDLIELGIQVKDTGVGECSW 580 ++F GRP L T V+ P L LT F +SSSPL KWY CGPTVYDSAHLGHAR+YVSQD++RR++T QD+ VMG+TDVDDKI+ A ++ +AR +E FL ++ ALNVL S++ RV+EHI +II YI+ +D+NG AY TS GVYFD A +YGKL AP +E + VG EK+++RDF LWK +K P E W+SPWGRGRPGWHIECSAMT H+LG +D+HSGGVDL FPHH NEIAQ DA+ + D W ++H GHLYIKGLKMSKSLKNFI++ LA + AD FR+FCLQ +++ +V +S + +A ++ F +F Q V G +R A +F ++ LA+ K+ V A ++ DTP L+ L +LV KA D EV+ +A YV LAL GL +L ++ GADV + FRA+VRA AL T+ +AQ +L LCD R+ L LGIQ++D G+ W Sbjct: 8 LTFHGRPMRRLST------GVSKPPLVAMNSLTGRLDTFPSSSSPL----------------KWYVCGPTVYDSAHLGHARSYVSQDILRRIVTQHFHQDIFLVMGMTDVDDKIIAAASAQQTSMANVARHHETAFLRNLAALNVLRVSSITRVSEHIPEIIGYIQGLDSNGFAYATSDGVYFDTVAMGS--SYGKL------------APSTPQEYTDIVLEDGAVG-GEKRNVRDFALWKLSKTPDEPG--WESPWGRGRPGWHIECSAMTHHVLGGSIDVHSGGVDLRFPHHNNEIAQCDAYHHHQAGRYLMVGSCVCFYSGVDHTWCQHFVHFGHLYIKGLKMSKSLKNFITIDALLANYSADAFRLFCLQYKYNVNVHFSHDRMRDANAVYHRFHSFFHTLQSHVKATEAGGASEHARRVDAADFRVLDALAQCKLEVDSA-LRLDFDTPGALQHLLELV--------TATNKAWT-DRPAMSVEVLCAVATYVMDTLALFGLDALRFPSLRLAAPVADDAASQSNAIQGADVMDV---FTTFRAQVRALAL----------------TNTSDKVAQDILKLCDTVRDAQLPSLGIQIEDISPGKSFW 552
BLAST of EWM23700.1 vs. NCBI_GenBank
Match: gi|698779181|ref|XP_009822634.1| (cysteine-tRNA ligase [Aphanomyces astaci] >gi|574122295|gb|ETV87771.1| cysteine-tRNA ligase [Aphanomyces astaci]) HSP 1 Score: 390.578 bits (1002), Expect = 1.667e-124 Identity = 246/613 (40.13%), Postives = 324/613 (52.85%), Query Frame = 0 Query: 1 MSFPGRPRGALETLARSTYFVNLPRLTLSAVLTRNRRHFGASSSPLIPLLKKSAERPSLEALKWYACGPTVYDSAHLGHARTYVSQDVIRRVLTDFLGQDVIFVMGITDVDDKILQRAMERKEDPRALARRYEADFLADMRALNVLEPSALVRVTEHIRDIIDYIKQIDTNGMAYETSSGVYFDVRAFSKKFAYGKLKTKDRVRSANAEAPVGREEGQQERIGVDVVGMDEKKDLRDFVLWKFNK-PGEAAMSWDSPWGRGRPGWHIECSAMTQHLLGPHLDIHSGGVDLCFPHHTNEIAQSDAFRMSE-----------------DPAWVGAWLHTGHLYIKGLKMSKSLKNFISVREFLAGHDADDFRMFCLQRRFDADVDYSESALLEARSLRQVFINFVSLAQQRVHVLSRDG----CKRWGAKEFEIMAELARVKVGVRKAFVQGGLDTPQVLRLLRDLVGLGHEYLRQGDGKAEERDGTEARGEVVSNLAAYVAKLLALLGLRCFNQFTL-----------LHRGSLSGADVESLAKSLVDFRARVRAAALEGRRRRPRDGSDVEEKEGTTAALAQRLLVLCDEFRERDLIELGIQVKDTGVGECSW 580 ++F GRP L T V+ P L LT F +SSSPL KWY CGPTVYDSAHLGHAR+YVSQD++RR++T QD+ VMG+TDVDDKI+ A ++ +AR +E FL ++ ALNVL S++ RV+EHI +II YI+ +D+NG AY TS GVYFD A +YGKL AP +E + VG EK+++RDF LWK +K P E W+SPWGRGRPGWHIECSAMT H+LG +D+HSGGVDL FPHH NEIAQ DA+ + D W ++H GHLYIKGLKMSKSLKNFI++ LA + AD FR+FCLQ +++ +V +S + +A ++ F +F Q V G +R A +F ++ LA+ K+ V A ++ DTP L+ L +LV KA D EV+ +A YV LAL GL +L ++ GADV + FRA+VRA AL T+ +AQ +L LCD R+ L LGIQ++D G+ W Sbjct: 8 LTFHGRPMRRLST------GVSKPPLVAMNSLTGRLDTFPSSSSPL----------------KWYVCGPTVYDSAHLGHARSYVSQDILRRIVTQHFHQDIFLVMGMTDVDDKIIAAASAQQTSMANVARHHETAFLRNLAALNVLRVSSITRVSEHIPEIIGYIQGLDSNGFAYATSDGVYFDTVAMGS--SYGKL------------APSTPQEYTDIVLEDGAVG-GEKRNVRDFALWKLSKTPDEPG--WESPWGRGRPGWHIECSAMTHHVLGGSIDVHSGGVDLRFPHHNNEIAQCDAYHHHQAGRYLMVGSCVCFYSGVDHTWCQHFVHFGHLYIKGLKMSKSLKNFITIDALLANYSADAFRLFCLQYKYNVNVHFSHDRMRDANAVYHRFHSFFHTLQSHVKATEAGGASEHARRVDAADFRVLDALAQCKLEVDSA-LRLDFDTPGALQHLLELV--------TATNKAWT-DRPAMSVEVLCAVATYVMDTLALFGLDALRFPSLRLAAPVADDAASQSNAIQGADVMDV---FTTFRAQVRALAL----------------TNTSDKVAQDILKLCDTVRDAQLPSLGIQIEDISPGKSFW 552
BLAST of EWM23700.1 vs. NCBI_GenBank
Match: gi|673015380|ref|XP_008861651.1| (cysteine-tRNA ligase [Aphanomyces invadans] >gi|574483249|gb|ETW10240.1| cysteine-tRNA ligase [Aphanomyces invadans]) HSP 1 Score: 388.652 bits (997), Expect = 6.685e-124 Identity = 236/567 (41.62%), Postives = 313/567 (55.20%), Query Frame = 0 Query: 24 PRLTLSAVLTRNRRHFGASSSPLIPLLKKSAERPSLEALKWYACGPTVYDSAHLGHARTYVSQDVIRRVLTDFLGQDVIFVMGITDVDDKILQRAMERKEDPRALARRYEADFLADMRALNVLEPSALVRVTEHIRDIIDYIKQIDTNGMAYETSSGVYFDVRAFSKKFAYGKLKTKDRVRSANAEAPVGREEGQQERIGVDVVGMDEKKDLRDFVLWKFNKPGEAAMSWDSPWGRGRPGWHIECSAMTQHLLGPHLDIHSGGVDLCFPHHTNEIAQSDAFRMSE-DPAWVGAWLHTGHLYIKGLKMSKSLKNFISVREFLAGHDADDFRMFCLQRRFDADVDYSESALLEARSLRQVFINFVSLAQQRVHVLSRDG-CKRWGAKEFEIMAELARVKVGVRKAFVQGGLDTPQVLRLLRDLVGLGHEYLRQGDGKAEERDGTEARGEVVSNLAAYVAKLLALLGLRCFNQFTLLHRGSLSGADVESL----AKSLVD----FRARVRAAALEGRRRRPRDGSDVEEKEGTTAALAQRLLVLCDEFRERDLIELGIQVKDTGVGECSW 580 P+L LT F SSSPL KWY CGPTVYDSAHLGHAR+YVSQD++RRVLT Q++ VMG+TDVDDKI+ A ++ +AR EA FL ++ LNVL S++ RV+EHI +II YI+ + NG AY TS GVYFD A K YGKL N V E+G VG EK+++RDF LWK +K E W+SPWGRGRPGWHIECSAMT H+LG +D+HSGGVDL FPHH NEIAQ DA+ D W ++H GHLYIKGLKMSKSLKNFI++ L + AD FR+FCLQ +++ +V +SE + +A ++ Q F++F+ Q V + +R + ++A LA+ K V A ++ DTP+ L+ L DL+ ++ +D EV+ +A Y+ L L GL +F L + D SL A ++D FRA VRA AL T+ +A+ +L LCD R+ +L LGIQ++D G+ W Sbjct: 26 PQLVAFNSLTGQLDAFPTSSSPL----------------KWYVCGPTVYDSAHLGHARSYVSQDILRRVLTQHFHQEIFLVMGMTDVDDKIIAAAASQQTTMTNIARTNEAAFLRNLADLNVLRVSSITRVSEHIPEIIAYIQGLGANGFAYVTSDGVYFDTVAMGAK--YGKLAPNTPQEYDN----VVPEDG--------AVG-GEKRNVRDFALWKLSKSPEEP-GWESPWGRGRPGWHIECSAMTHHVLGDAIDVHSGGVDLRFPHHNNEIAQCDAYHHHACDHTWCKHFVHFGHLYIKGLKMSKSLKNFITIDSLLETYSADTFRVFCLQYKYNMNVHFSEDRMRDASAIYQRFLSFLQTLQSHVKAAAHSPLSRRVDGVDHTVLAALAQCKQDVDIA-MRHDFDTPRALQHLLDLISHTNKTW---------KDHPSMSVEVLCTVATYIVDTLTLFGLATL-RFPSLRLAAPVADDATSLNSIQANDVMDAFTTFRANVRALAL----------------TNTSDKVARDILNLCDNVRDVELPALGIQLEDVAPGKSFW 533
BLAST of EWM23700.1 vs. NCBI_GenBank
Match: gi|813149176|ref|XP_012200235.1| (cysteinyl-tRNA synthetase [Saprolegnia parasitica CBS 223.65] >gi|641535141|gb|KDO29065.1| cysteinyl-tRNA synthetase [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 387.882 bits (995), Expect = 9.212e-124 Identity = 235/567 (41.45%), Postives = 310/567 (54.67%), Query Frame = 0 Query: 33 TRNRRHFGASSSPLIPLLKKSAERPSLEA-----LKWYACGPTVYDSAHLGHARTYVSQDVIRRVLTDFLGQDVIFVMGITDVDDKILQRAMERKEDPRALARRYEADFLADMRALNVLEPSALVRVTEHIRDIIDYIKQIDTNGMAYETSSGVYFDVRAFSKKFAYGKLKTKDRVRSANAEAPVGREEGQQERIGVDVVGMDEKKDLRDFVLWKFNKPGEAAMSWDSPWGRGRPGWHIECSAMTQHLLGPHLDIHSGGVDLCFPHHTNEIAQSDAFRM-SEDPAWVGAWLHTGHLYIKGLKMSKSLKNFISVREFLA--GHDADDFRMFCLQRRFDADVDYSESALLEARSLRQVFINFVSLAQQRVHVLSRDGC--KRWGAKEFEIMAELARVKVGVRKAFVQGGLDTPQVLRLLRDLVGLGHEYLRQGDGKAEERDGTEARGEVVSNLAAYVAKLLALLG----LRCFNQFTLLHRGSLSG-----ADVESLAKSLVDFRARVRAAALEGRRRRPRDGSDVEEKEGTTAALAQRLLVLCDEFRERDLIELGIQVKDTGVGECSW 580 T RR ++S P+ L S + +L LKWY CGPTVYDSAHLGHAR+YVSQD++RRVLT + D+ VMG+TDVDDKI+ ++ + A+AR +EA FLAD+ +LNVL SA+ RV+EHI +I+ YI+ ++ NG AY TS GVYFD A G S IG EK+++RDF LWK +K + WDS +GRGRPGWHIECSAMT H+LG +D+HSGG+DLCFPHH NE+AQ D + S W ++H GHLYIKGLKMSKSLKNFIS+++FL+ G +D FR+FCLQ +++ +V +SE + +A L Q F +F Q V L++ +R + ++ LA KV V +A ++ DTP VL L L+ L H E + EVV LAAYV + L L G L F+ L + S A E++ FRARVR AL P+D +Q +L LCD+ R L LGIQ+ D G W Sbjct: 11 TTGRRLLSSASRPITALNSLSGKVEALPVASSGPLKWYVCGPTVYDSAHLGHARSYVSQDILRRVLTGYFRHDINLVMGMTDVDDKIIATSLREGKPMEAVARHHEAAFLADLASLNVLRASAITRVSEHIPEILAYIETLEANGFAYTTSDGVYFDT------VALGADDAAAADDSG---------------IG------SEKRNVRDFALWKRSKTADEP-GWDSRYGRGRPGWHIECSAMTHHVLGGSIDVHSGGIDLCFPHHNNEVAQCDGYHHNSAGHTWCKHFIHFGHLYIKGLKMSKSLKNFISIQDFLSAPGSSSDAFRLFCLQYKYNTNVHFSEDRMRDANVLLQRFTSFF----QAVVGLTKASTPHRRLETPDDVLLTALAEAKVEVDRA-LRNDFDTPAVLMQLTQLISLVH----------REVQARKISIEVVCRLAAYVLETLHLFGLDKSLTGFSSIALAAPVAASDAGAGLAHAENILDEFTAFRARVRQVALAN----PKDPQ------------SQAILALCDQLRNETLPPLGIQIDDVAPGTSHW 518
BLAST of EWM23700.1 vs. NCBI_GenBank
Match: gi|567955605|gb|ETK81238.1| (cysteine-tRNA ligase [Phytophthora parasitica] >gi|567984297|gb|ETL34669.1| cysteine-tRNA ligase [Phytophthora parasitica] >gi|568043907|gb|ETM41165.1| cysteine-tRNA ligase [Phytophthora parasitica] >gi|570945690|gb|ETP10947.1| cysteine-tRNA ligase [Phytophthora parasitica CJ01A1]) HSP 1 Score: 386.726 bits (992), Expect = 1.700e-122 Identity = 251/603 (41.63%), Postives = 330/603 (54.73%), Query Frame = 0 Query: 34 RNRRHFGASSSPLIPLLKKSAERPSLEALKWYACGPTVYDSAHLGHARTYVSQDVIRRVLTDFLGQDVIFVMGITDVDDKILQRAMERKEDPRALARRYEADFLADMRALNVLEPSALVRVTEHIRDIIDYIKQIDTNGMAYET--SSGVYFDVRAFSKKFAYGKLKTKDRVRSANAEAPVGREEGQQERIGVDVVGMD-------EKKDLRDFVLWKFNK-PGEAAMSWDSPWGRGRPGWHIECSAMTQHLLGPHLDIHSGGVDLCFPHHTNEIAQSDAF---RMSEDPAWVGAWLHTGHLYIKGLKMSKSLKNFISVREFLA-GHDADDFRMFCLQRRFDADVDYSESALLEARSLRQVFINFV-SLAQQRVHVLSRDG------CKRWGAKEFEIMAELARVKVGVRKAFVQGGLDTPQVLRLLRDLVGLGHEYLRQGDGKAEERDGTEARGEVVSNLAAYVAKLLALLGLRCFN---------QFTLLHRGS----------LSGADVESLAKSLVDFRARVRAAALEGRRRRPRDGSDVEEKEGTTAALAQRLLVLCDEFRERDLIELGIQVKDTGVGECSWTLASPSSAPCEAADQK 596 R+ + F A + P ++++ P++ LKWYACGPTVYDSAHLGHAR YVSQD++RRV G +V VMG+TDVDDKI++RA E+ LAR E F ADM L V P+A+ RV+EH+ +II YIK+I G AYE SGVYF+ + K YGKL + R+ Q E++ V D KKD RDF LWK K P E A W SPWG GRPGWHIECSAMT H+LG LD+H+GGVDL FPHH NEIAQ +A + + D W ++H GHLYI+G KMSKSLKNFISVR+FL GH AD FR+FCLQ ++ A++ YSE + +A ++ F S+ H +S G KR + E++ L + V A + LDTP+ L L+ +LV G+ YL G TEA EV+ +L YV +L L GL + +FT H + +S D E+L +SL+ FRA VR AL R P+ + R+L LCD+ R ++L +LGIQ++D G + L S + E D K Sbjct: 38 RDLKMFNALTGQCEPFPRETSATPNV--LKWYACGPTVYDSAHLGHARAYVSQDILRRVAERTGGYNVQLVMGVTDVDDKIIKRAKEKNVSFETLAREQEQQFFADMTKLYVKPPTAITRVSEHLPEIIKYIKEIQNKGFAYEAVDGSGVYFNTQQLGDK--YGKLDPR-------------RQTQQDEQLLAAVEQSDVVEEEEKVKKDPRDFALWKAAKEPDEPA--WPSPWGMGRPGWHIECSAMTHHVLGDKLDVHTGGVDLRFPHHNNEIAQCEAHNHQQCNHDEEWCKHFVHFGHLYIRGRKMSKSLKNFISVRDFLQDGHTADHFRLFCLQFKYRANLVYSEDRVRDAEAVADRLRGFFRSVTAYGDHEISSSGHTQHIKSKRCEQLDLELLDALFATRAQVDAALLD-DLDTPRALSLVLELVSRGNTYLLASRG------DTEAPDEVLMSLTDYVLDVLDLFGLEGLHAEFSTMMRRRFTSRHSETQHKVEESDELVSRDDHEALLRSLLKFRASVREEAL----RDPKQPGNA------------RVLSLCDDLRNKELPQLGIQIEDLSPGRSVFKLLSRTERKAETEDTK 598 The following BLAST results are available for this feature:
BLAST of EWM23700.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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